# geneInfo

ensembl_gene_id: NG42_11770
symbol: KOC89523.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0178 family.


ensembl_gene_id: NG42_11785
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: NG42_11790
symbol: KOC89527.1
gene_biotype: protein_coding
description:
  Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_11800
symbol: KOC89529.1
gene_biotype: protein_coding
description:
  Phosphate starvation-inducible protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_11915
symbol: KOC89548.1
gene_biotype: protein_coding
description:
  Glucuronyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_11920
symbol: KOC89549.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_11950
symbol: KOC89554.1
gene_biotype: protein_coding
description:
  Purine nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_11960
symbol: KOC89555.1
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_11995
symbol: KOC89562.1
gene_biotype: protein_coding
description:
  DNA polymerase V subunit UmuC; Binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12000
symbol: KOC89563.1
gene_biotype: protein_coding
description:
  Binds with UmuC protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S24 family.


ensembl_gene_id: NG42_12005
symbol: KOC89564.1
gene_biotype: protein_coding
description:
  Carbonate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12015
symbol: KOC89566.1
gene_biotype: protein_coding
description:
  Multidrug transporter AcrB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: NG42_12035
symbol: gudD
gene_biotype: protein_coding
description:
  Glucarate dehydratase; Catalyzes the formation of 5-keto-4-deoxy-D-glucarate from glucarate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12040
symbol: KOC89571.1
gene_biotype: protein_coding
description:
  Aerotaxis receptor Aer; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12050
symbol: KOC89572.1
gene_biotype: protein_coding
description:
  Peptide permease BMEII0860; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12070
symbol: KOC89574.1
gene_biotype: protein_coding
description:
  Galactonate operon transcriptional repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12085
symbol: KOC89576.1
gene_biotype: protein_coding
description:
  Chloride channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12100
symbol: KOC89579.1
gene_biotype: protein_coding
description:
  Translocase; Involved in O antigen modification. Involved in the translocation of bactoprenol-linked glucose across the cytoplasmic membrane.


ensembl_gene_id: NG42_12120
symbol: proA
gene_biotype: protein_coding
description:
  Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: NG42_12125
symbol: proB
gene_biotype: protein_coding
description:
  Gamma-glutamyl kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: NG42_12135
symbol: crl
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes. Stimulates RNA polymerase holoenzyme formation and may bind to several other sigma factors, such as sigma-70 and sigma-32; Belongs to the Crl family.


ensembl_gene_id: NG42_12140
symbol: frsA
gene_biotype: protein_coding
description:
  Fermentation/respiration switch protein; Forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc; FrsA may promote fermentation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0255 family.


ensembl_gene_id: NG42_12145
symbol: gpt
gene_biotype: protein_coding
description:
  Xanthine-guanine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.


ensembl_gene_id: NG42_12150
symbol: KOC89589.1
gene_biotype: protein_coding
description:
  Aminoacyl-histidine dipeptidase; Catalyzes the hydrolysis of Xaa-His dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12155
symbol: KOC89590.1
gene_biotype: protein_coding
description:
  Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the catalase family.


ensembl_gene_id: NG42_12160
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: NG42_12165
symbol: KOC89592.1
gene_biotype: protein_coding
description:
  Transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12175
symbol: gmhA
gene_biotype: protein_coding
description:
  Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.


ensembl_gene_id: NG42_12180
symbol: fadE
gene_biotype: protein_coding
description:
  acyl-CoA dehydrogenase; Functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12185
symbol: mtnK
gene_biotype: protein_coding
description:
  Methylthioribose kinase; Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.


ensembl_gene_id: NG42_12190
symbol: mtnA
gene_biotype: protein_coding
description:
  Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: NG42_12195
symbol: mtnD
gene_biotype: protein_coding
description:
  Acireductone dioxygenase; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway.


ensembl_gene_id: NG42_12200
symbol: mtnC
gene_biotype: protein_coding
description:
  Haloacid dehalogenase; Bifunctional enzyme that catalyzes the enolization of 2,3- diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK- MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene). Belongs to the HAD-like hydrolase superfamily. MasA/MtnC family.


ensembl_gene_id: NG42_12205
symbol: mtnB
gene_biotype: protein_coding
description:
  Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). Belongs to the aldolase class II family. MtnB subfamily.


ensembl_gene_id: NG42_12210
symbol: KOC89601.1
gene_biotype: protein_coding
description:
  Methionine aminotransferase; Catalyzes the transfer of an amino moiety; preference for methionine followed by histidine and phenylalanine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12215
symbol: KOC89602.1
gene_biotype: protein_coding
description:
  Carbon-nitrogen hydrolase; NAD(P)-binding; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12220
symbol: KOC89603.1
gene_biotype: protein_coding
description:
  Uracil permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12225
symbol: KOC89604.1
gene_biotype: protein_coding
description:
  5-hydroxyisourate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.


ensembl_gene_id: NG42_12230
symbol: KOC89605.1
gene_biotype: protein_coding
description:
  OHCU decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12245
symbol: KOC89637.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12255
symbol: KOC89608.1
gene_biotype: protein_coding
description:
  Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12260
symbol: KOC89609.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: NG42_12280
symbol: KOC89612.1
gene_biotype: protein_coding
description:
  Amidase; Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12290
symbol: KOC89614.1
gene_biotype: protein_coding
description:
  Allantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12295
symbol: KOC89615.1
gene_biotype: protein_coding
description:
  Asp/Glu racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12305
symbol: KOC89617.1
gene_biotype: protein_coding
description:
  Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12315
symbol: dnaQ
gene_biotype: protein_coding
description:
  DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.


ensembl_gene_id: NG42_12330
symbol: gloB
gene_biotype: protein_coding
description:
  Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.


ensembl_gene_id: NG42_12335
symbol: mltD
gene_biotype: protein_coding
description:
  Lytic murein transglycosylase; Catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; may play a role in recycling muropeptides during cell division and/or cell elongation; in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12340
symbol: KOC89623.1
gene_biotype: protein_coding
description:
  SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12355
symbol: dkgB
gene_biotype: protein_coding
description:
  Catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12385
symbol: KOC89363.1
gene_biotype: protein_coding
description:
  Citrate:succinate antiporter; Involved in the transport of citrate into the cell along with the export of succinate out of the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12395
symbol: KOC89365.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.


ensembl_gene_id: NG42_12405
symbol: chiP
gene_biotype: protein_coding
description:
  Chitoporin; Outer membrane porin involved in the transport of chitooligosaccharides; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12425
symbol: KOC89369.1
gene_biotype: protein_coding
description:
  Pectate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12440
symbol: KOC89372.1
gene_biotype: protein_coding
description:
  Melibiose:sodium symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12445
symbol: KOC89373.1
gene_biotype: protein_coding
description:
  Alpha-galactosidase; Catalyses the hydrolysis of terminal non-reducing alpha-D-galactose residues in alpha-D-galactosides; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12485
symbol: KOC89380.1
gene_biotype: protein_coding
description:
  Carbamoyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12495
symbol: KOC89381.1
gene_biotype: protein_coding
description:
  Aldehyde oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12535
symbol: arnB
gene_biotype: protein_coding
description:
  UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase; Catalyzes the conversion of UDP-4-keto-arabinose (UDP-Ara4O) to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; Belongs to the DegT/DnrJ/EryC1 family. ArnB subfamily.


ensembl_gene_id: NG42_12540
symbol: arnC
gene_biotype: protein_coding
description:
  UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase; Catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides.


ensembl_gene_id: NG42_12545
symbol: arnA
gene_biotype: protein_coding
description:
  UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto- arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4- amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido- arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; In the N-terminal section; belongs to the Fmt family. UDP- L-Ara4N formyltransferase subfamily.


ensembl_gene_id: NG42_12550
symbol: arnD
gene_biotype: protein_coding
description:
  4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase; Catalyzes the deformylation of 4-deoxy-4-formamido-L- arabinose-phosphoundecaprenol to 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; Belongs to the polysaccharide deacetylase family. ArnD deformylase subfamily.


ensembl_gene_id: NG42_12555
symbol: arnT
gene_biotype: protein_coding
description:
  4-amino-4-deoxy-L-arabinose transferase; Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides. Belongs to the glycosyltransferase 83 family.


ensembl_gene_id: NG42_12560
symbol: arnE
gene_biotype: protein_coding
description:
  4-amino-4-deoxy-L-arabinose-phospho-UDP flippase; Translocates 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane; Belongs to the ArnE family.


ensembl_gene_id: NG42_12565
symbol: arnF
gene_biotype: protein_coding
description:
  4-amino-4-deoxy-L-arabinose-phospho-UDP flippase; Translocates 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane; Belongs to the ArnF family.


ensembl_gene_id: NG42_12575
symbol: KOC89395.1
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein CcmE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12580
symbol: KOC89396.1
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein CcmF; The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane.


ensembl_gene_id: NG42_12595
symbol: KOC89399.1
gene_biotype: protein_coding
description:
  aryl-phospho-beta-D-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 1 family.


ensembl_gene_id: NG42_12645
symbol: KOC89408.1
gene_biotype: protein_coding
description:
  Transporter; Member of the Gnt family of gluconate transporters; not involved in gluconate transport; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12650
symbol: pagP-2
gene_biotype: protein_coding
description:
  Hypothetical protein; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors.


ensembl_gene_id: NG42_12670
symbol: tatE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatE shares overlapping functions with TatA; Belongs to the TatA/E family. TatE subfamily.


ensembl_gene_id: NG42_12675
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: NG42_12680
symbol: lipB
gene_biotype: protein_coding
description:
  Lipoate--protein ligase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: NG42_12685
symbol: KOC89415.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0250 family.


ensembl_gene_id: NG42_12695
symbol: KOC89462.1
gene_biotype: protein_coding
description:
  Rare lipoprotein A; Septal ring protein, suppressor of prc, minor lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12700
symbol: mrdB
gene_biotype: protein_coding
description:
  Cell wall shape-determining protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: NG42_12705
symbol: mrdA
gene_biotype: protein_coding
description:
  Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.


ensembl_gene_id: NG42_12710
symbol: rlmH
gene_biotype: protein_coding
description:
  50S rRNA methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: NG42_12715
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: NG42_12720
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: NG42_12725
symbol: holA
gene_biotype: protein_coding
description:
  DNA polymerase III subunit delta; Required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12730
symbol: lptE
gene_biotype: protein_coding
description:
  LPS biosynthesis protein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane.


ensembl_gene_id: NG42_12735
symbol: leuS
gene_biotype: protein_coding
description:
  leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; Derived by automated computational  [...]


ensembl_gene_id: NG42_12745
symbol: artP
gene_biotype: protein_coding
description:
  Arginine transporter ATP-binding subunit; With ArtMQJI transports arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12750
symbol: KOC89461.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; With GltJLPS and GadC for glutamate and GltJLP, DctA and DcuAB for aspartate is involved in the transport of glutamate and aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12755
symbol: KOC89426.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; With GltIKL is involved in the transport of glutamate and aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12770
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: NG42_12775
symbol: KOC89430.1
gene_biotype: protein_coding
description:
  Magnesium/cobalt efflux protein CorC; Involved in the transport of magnesium and cobalt ions; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12780
symbol: ybeY
gene_biotype: protein_coding
description:
  Metal-binding heat shock protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: NG42_12785
symbol: KOC89432.1
gene_biotype: protein_coding
description:
  Nucleoside triphosphate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12790
symbol: miaB
gene_biotype: protein_coding
description:
  (dimethylallyl)adenosine tRNA methylthiotransferase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: NG42_12795
symbol: ubiF
gene_biotype: protein_coding
description:
  2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol; functions in the biosynthesis of ubiquinone or coenzyme Q; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12835
symbol: asnB
gene_biotype: protein_coding
description:
  Functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12840
symbol: KOC89436.1
gene_biotype: protein_coding
description:
  UMP phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12845
symbol: KOC89437.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates the synthesis of glucosamine and N-acetylglucosamine by acting as a repressor of the nagEBACD operon and both a repressor and activator of the glmSU operon; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12850
symbol: nagA
gene_biotype: protein_coding
description:
  N-acetylglucosamine-6-phosphate deacetylase; Catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12855
symbol: nagB
gene_biotype: protein_coding
description:
  Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.


ensembl_gene_id: NG42_12860
symbol: KOC89440.1
gene_biotype: protein_coding
description:
  PTS N-acetyl glucosamine transporter subunits IIABC; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12865
symbol: glnS
gene_biotype: protein_coding
description:
  glutamate--tRNA ligase; Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12870
symbol: KOC89442.1
gene_biotype: protein_coding
description:
  Tryptophan transporter of high affinity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12875
symbol: fur
gene_biotype: protein_coding
description:
  Ferric uptake regulator; Negatively regulates a number of operons that encode enzymes involved in iron transport; activated by manganese; forms a homodimer; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family.


ensembl_gene_id: NG42_12880
symbol: KOC89444.1
gene_biotype: protein_coding
description:
  Flavodoxin FldA; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family.


ensembl_gene_id: NG42_12885
symbol: KOC89445.1
gene_biotype: protein_coding
description:
  LexA regulated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12890
symbol: KOC89446.1
gene_biotype: protein_coding
description:
  acyl-CoA esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12895
symbol: seqA
gene_biotype: protein_coding
description:
  Replication initiation regulator SeqA; Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated.


ensembl_gene_id: NG42_12900
symbol: KOC89448.1
gene_biotype: protein_coding
description:
  Phosphoglucomutase; Catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12905
symbol: KOC89449.1
gene_biotype: protein_coding
description:
  Response regulator in two-component regulatory system with KdpD; regulates the kdp operon involved in potassium transport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12910
symbol: KOC89450.1
gene_biotype: protein_coding
description:
  Sensor protein KdpD; Sensory histidine kinase in two-component regulatory system with KdpE; signal sensing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12915
symbol: kdpC
gene_biotype: protein_coding
description:
  Potassium-transporting ATPase subunit C; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.


ensembl_gene_id: NG42_12920
symbol: KOC89452.1
gene_biotype: protein_coding
description:
  Potassium-transporting ATPase subunit B; One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily.


ensembl_gene_id: NG42_12925
symbol: kdpA
gene_biotype: protein_coding
description:
  Potassium-transporting ATPase subunit A; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane.


ensembl_gene_id: NG42_12940
symbol: pntB
gene_biotype: protein_coding
description:
  Pyridine nucleotide transhydrogenase; Catalyzes reversible transfer of hydride ion equivalent between NAD and NADP; membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane; forms a tetramer composed of two alpha and 2 beta subunits; AB-stereospecific enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12950
symbol: KOC89236.1
gene_biotype: protein_coding
description:
  Membrane protein, TIGR04086 family; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12955
symbol: KOC89237.1
gene_biotype: protein_coding
description:
  Universal stress protein UspE; With UspC and UspD is involved in resistance to UV irradiation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12960
symbol: KOC89238.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Global transcription factor that controls the expression of over 100 target genes in response to anoxia; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12965
symbol: KOC89314.1
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein CcdA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12975
symbol: KOC89240.1
gene_biotype: protein_coding
description:
  D-arabinitol 4-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_12985
symbol: KOC89315.1
gene_biotype: protein_coding
description:
  Cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: NG42_12995
symbol: KOC89243.1
gene_biotype: protein_coding
description:
  DNA endonuclease SmrA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13015
symbol: KOC89246.1
gene_biotype: protein_coding
description:
  4-hydroxybenzoate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13080
symbol: KOC89257.1
gene_biotype: protein_coding
description:
  PTS lactose transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13100
symbol: KOC89261.1
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase; NAD-linked; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: NG42_13105
symbol: rhaT
gene_biotype: protein_coding
description:
  Rhamnose:proton symporter; Uptake of L-rhamnose across the boundary membrane with the concomitant transport of protons into the cell (symport system). Belongs to the L-rhamnose transporter (TC 2.A.7.6) family.


ensembl_gene_id: NG42_13115
symbol: KOC89264.1
gene_biotype: protein_coding
description:
  Colicin V secretion protein CvaA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13120
symbol: KOC89265.1
gene_biotype: protein_coding
description:
  Colicin V synthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13135
symbol: rhaB
gene_biotype: protein_coding
description:
  Rhamnulokinase; Involved in the catabolism of L-rhamnose (6-deoxy-L-mannose). Catalyzes the transfer of the gamma-phosphate group from ATP to the 1- hydroxyl group of L-rhamnulose to yield L-rhamnulose 1-phosphate. Belongs to the rhamnulokinase family.


ensembl_gene_id: NG42_13140
symbol: rhaA
gene_biotype: protein_coding
description:
  Sugar isomerase; Catalyzes the formation of L-rhamnulose from L-rhamnose; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13145
symbol: rhaD
gene_biotype: protein_coding
description:
  Rhamnulose-1-phosphate aldolase; Catalyzes the reversible cleavage of L-rhamnulose-1-phosphate to dihydroxyacetone phosphate (DHAP) and L-lactaldehyde. Belongs to the aldolase class II family. RhaD subfamily.


ensembl_gene_id: NG42_13165
symbol: sotB
gene_biotype: protein_coding
description:
  Arabinose transporter; Involved in the efflux of sugars. The physiological role may be the reduction of the intracellular concentration of toxic sugars or sugar metabolites; Belongs to the major facilitator superfamily. SotB (TC 2.A.1.2) family.


ensembl_gene_id: NG42_13190
symbol: KOC89277.1
gene_biotype: protein_coding
description:
  Sulfonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13275
symbol: KOC89288.1
gene_biotype: protein_coding
description:
  Acriflavin resistance protein AcrA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: NG42_13285
symbol: KOC89290.1
gene_biotype: protein_coding
description:
  Ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13290
symbol: KOC89291.1
gene_biotype: protein_coding
description:
  Ribonuclease inhibitor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13300
symbol: KOC89292.1
gene_biotype: protein_coding
description:
  Virulence factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13305
symbol: KOC89293.1
gene_biotype: protein_coding
description:
  Virulence factor SrfB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13315
symbol: KOC89295.1
gene_biotype: protein_coding
description:
  Butanediol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13335
symbol: tqsA
gene_biotype: protein_coding
description:
  Pheromone autoinducer 2 transporter; Transport of quorum-sensing signal; mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13340
symbol: KOC89300.1
gene_biotype: protein_coding
description:
  Multidrug RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13355
symbol: KOC89302.1
gene_biotype: protein_coding
description:
  NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13360
symbol: KOC89303.1
gene_biotype: protein_coding
description:
  Glucose dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13370
symbol: KOC89305.1
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family.


ensembl_gene_id: NG42_13380
symbol: KOC89306.1
gene_biotype: protein_coding
description:
  L-sorbosone dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13400
symbol: KOC89309.1
gene_biotype: protein_coding
description:
  Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13430
symbol: xni
gene_biotype: protein_coding
description:
  Flap endonuclease-like protein; Has flap endonuclease activity. During DNA replication, flap endonucleases cleave the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment.


ensembl_gene_id: NG42_13435
symbol: KOC89112.1
gene_biotype: protein_coding
description:
  LOG family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13440
symbol: queF
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).


ensembl_gene_id: NG42_13445
symbol: syd
gene_biotype: protein_coding
description:
  Secretion protein; Interacts with the SecY protein in vivo. May bind preferentially to an uncomplexed state of SecY, thus functioning either as a chelating agent for excess SecY in the cell or as a regulatory factor that negatively controls the translocase function. Belongs to the Syd family.


ensembl_gene_id: NG42_13455
symbol: KOC89116.1
gene_biotype: protein_coding
description:
  Catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13460
symbol: KOC89117.1
gene_biotype: protein_coding
description:
  Flavodoxin; An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13465
symbol: garD
gene_biotype: protein_coding
description:
  Galactarate dehydrogenase; Catalyzes the formation of 5-dehydro-4-deoxy-D-glucarate from D-galactarate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13475
symbol: KOC89120.1
gene_biotype: protein_coding
description:
  Glucarate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13485
symbol: garL
gene_biotype: protein_coding
description:
  alpha-dehydro-beta-deoxy-D-glucarate aldolase; Catalyzes the reversible retro-aldol cleavage of both 5-keto- 4-deoxy-D-glucarate and 2-keto-3-deoxy-D-glucarate to pyruvate and tartronic semialdehyde; Belongs to the HpcH/HpaI aldolase family. KDGluc aldolase subfamily.


ensembl_gene_id: NG42_13490
symbol: garR
gene_biotype: protein_coding
description:
  Tartronate semialdehyde reductase; Catalyzes the reduction of tatronate semialdehyde to D- glycerate; Belongs to the HIBADH-related family. 2-hydroxy-3- oxopropionate reductase subfamily.


ensembl_gene_id: NG42_13495
symbol: KOC89124.1
gene_biotype: protein_coding
description:
  Glycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13500
symbol: KOC89125.1
gene_biotype: protein_coding
description:
  Histidine kinase; Part of the two-component regulatory system with UvrY; involved in the regulation of carbon metabolism via the csrA/csrB regulatory system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13505
symbol: rumA
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.


ensembl_gene_id: NG42_13510
symbol: relA
gene_biotype: protein_coding
description:
  (p)ppGpp synthetase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: NG42_13515
symbol: mazG
gene_biotype: protein_coding
description:
  Nucleoside triphosphate hydrolase; Functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13520
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: NG42_13525
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.


ensembl_gene_id: NG42_13540
symbol: queE
gene_biotype: protein_coding
description:
  Pyrroloquinoline quinone biosynthesis protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: NG42_13545
symbol: KOC89134.1
gene_biotype: protein_coding
description:
  6-carboxy-5,6,7,8-tetrahydropterin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13550
symbol: cysJ
gene_biotype: protein_coding
description:
  Sulfite reductase subunit alpha; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component. Belongs to the NADPH-dependent sulphite reductase flavoprotein subunit CysJ family. In the N-terminal section; belongs to the flavodoxin family.


ensembl_gene_id: NG42_13555
symbol: cysI
gene_biotype: protein_coding
description:
  Sulfite reductase subunit beta; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: NG42_13560
symbol: cysH
gene_biotype: protein_coding
description:
  Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.


ensembl_gene_id: NG42_13575
symbol: KOC89140.1
gene_biotype: protein_coding
description:
  Alkaline phosphatase; Catalyzes the sequential removal of 2 amino-terminal arginines from alkaline phosphatase isozyme 1 to form isozymes 2 and 3; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13580
symbol: cysG-2
gene_biotype: protein_coding
description:
  Sirohydrochlorin ferrochelatase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family.  In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family.


ensembl_gene_id: NG42_13585
symbol: cysD
gene_biotype: protein_coding
description:
  Sulfate adenylyltransferase subunit 2; With CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13590
symbol: cysN
gene_biotype: protein_coding
description:
  Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.


ensembl_gene_id: NG42_13605
symbol: KOC89145.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13620
symbol: ftsB
gene_biotype: protein_coding
description:
  Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: NG42_13625
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). Belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.


ensembl_gene_id: NG42_13630
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: NG42_13635
symbol: truD
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.


ensembl_gene_id: NG42_13640
symbol: surE
gene_biotype: protein_coding
description:
  Stationary phase survival protein SurE; Nucleotidase with a broad substrate specificity as it can dephosphorylate various ribo- and deoxyribonucleoside 5'-monophosphates and ribonucleoside 3'-monophosphates with highest affinity to 3'-AMP. Also hydrolyzes polyphosphate (exopolyphosphatase activity) with the preference for short-chain-length substrates (P20-25). Might be involved in the regulation of dNTP and NTP pools, and in the turnover of 3'-mononucleotides produced by numerous intracellular RNases (T1, T2, and F) during the degradation of various RNAs.


ensembl_gene_id: NG42_13645
symbol: pcm
gene_biotype: protein_coding
description:
  protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.


ensembl_gene_id: NG42_13655
symbol: rpoS
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response.


ensembl_gene_id: NG42_13660
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: NG42_13700
symbol: acpS-2
gene_biotype: protein_coding
description:
  Hypothetical protein; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: NG42_13725
symbol: KOC89164.1
gene_biotype: protein_coding
description:
  beta-ketoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: NG42_13775
symbol: malS
gene_biotype: protein_coding
description:
  Alpha-amylase; Periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB; hydrolyzes alpha-(1,4) glycosidic linkages; contains internal disulfide bonds; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13785
symbol: KOC89173.1
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DapA family.


ensembl_gene_id: NG42_13790
symbol: tam
gene_biotype: protein_coding
description:
  Trans-aconitate methyltransferase; Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate.


ensembl_gene_id: NG42_13800
symbol: recA
gene_biotype: protein_coding
description:
  Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: NG42_13810
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: NG42_13815
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s).


ensembl_gene_id: NG42_13845
symbol: KOC89180.1
gene_biotype: protein_coding
description:
  6-phosphogluconate phosphatase; YqaB; catalyzes the dephosphorylation of fructose 1-phosphate, 6-phosphogluconate and p-nitrophenyl phosphate (pNPP); presents beta-phosphoglucomutase activity at a lower extent; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13855
symbol: gshA
gene_biotype: protein_coding
description:
  Glutamate--cysteine ligase; Involved in the first step of glutathione biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.


ensembl_gene_id: NG42_13860
symbol: luxS
gene_biotype: protein_coding
description:
  S-ribosylhomocysteinase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family.


ensembl_gene_id: NG42_13875
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components; Belo [...]


ensembl_gene_id: NG42_13880
symbol: rpsP
gene_biotype: protein_coding
description:
  30S ribosomal protein S16; Binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family.


ensembl_gene_id: NG42_13885
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA-processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: NG42_13890
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: NG42_13895
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: NG42_13905
symbol: KOC89192.1
gene_biotype: protein_coding
description:
  Ribosomal-protein-serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13915
symbol: tyrA
gene_biotype: protein_coding
description:
  Chorismate mutase; Catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13920
symbol: pheA
gene_biotype: protein_coding
description:
  Chorismate mutase; Catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13925
symbol: KOC89196.1
gene_biotype: protein_coding
description:
  Translation inhibitor protein RaiA; Associated with 30S ribosomal subunit; interferes with translation elongation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13930
symbol: bamD
gene_biotype: protein_coding
description:
  Membrane biogenesis protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamA, the core component of the assembly machinery.


ensembl_gene_id: NG42_13940
symbol: KOC89199.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the multicopper oxidase YfiH/RL5 family.


ensembl_gene_id: NG42_13945
symbol: clpB
gene_biotype: protein_coding
description:
  Protein disaggregation chaperone; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: NG42_13950
symbol: KOC89080.1
gene_biotype: protein_coding
description:
  Keto-deoxy-phosphogluconate aldolase; Catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13955
symbol: KOC88981.1
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate. Belongs to the PurK/PurT family.


ensembl_gene_id: NG42_13960
symbol: KOC88982.1
gene_biotype: protein_coding
description:
  DNA damage-inducible SOS regulon protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13975
symbol: KOC88985.1
gene_biotype: protein_coding
description:
  Protease 2; PtrB; oligopeptidase that cleaves peptide bonds following arginine and lysine residues; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13980
symbol: KOC88986.1
gene_biotype: protein_coding
description:
  3'-5' exonuclease activity on single or double-strand DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_13990
symbol: KOC88988.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit theta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14000
symbol: KOC88990.1
gene_biotype: protein_coding
description:
  Copper resistance protein CopD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14030
symbol: KOC88995.1
gene_biotype: protein_coding
description:
  Bactoprenol glucosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14040
symbol: KOC88997.1
gene_biotype: protein_coding
description:
  Colicin transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14055
symbol: KOC88999.1
gene_biotype: protein_coding
description:
  Antitoxin HicB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14085
symbol: KOC89004.1
gene_biotype: protein_coding
description:
  Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14090
symbol: yebU
gene_biotype: protein_coding
description:
  RNA methyltransferase RsmF; Specifically methylates the cytosine at position 1407 (m5C1407) of 16S rRNA.


ensembl_gene_id: NG42_14105
symbol: KOC89007.1
gene_biotype: protein_coding
description:
  Free methionine-R-sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14110
symbol: proQ
gene_biotype: protein_coding
description:
  Prop expression regulator; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities. May regulate ProP activity through an RNA-based, post-transcriptional mechanism. Belongs to the ProQ family.


ensembl_gene_id: NG42_14115
symbol: KOC89009.1
gene_biotype: protein_coding
description:
  Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family.


ensembl_gene_id: NG42_14120
symbol: htpX
gene_biotype: protein_coding
description:
  Heat shock protein HtpX; Metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M48B family.


ensembl_gene_id: NG42_14125
symbol: KOC89011.1
gene_biotype: protein_coding
description:
  Multidrug MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.


ensembl_gene_id: NG42_14130
symbol: KOC89012.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates the genes involved in 2-keto-3-deoxy gluconate transport and catabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14155
symbol: KOC89017.1
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14170
symbol: KOC89020.1
gene_biotype: protein_coding
description:
  PTS mannose transporter subunit IID; Hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IID with IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14175
symbol: KOC89085.1
gene_biotype: protein_coding
description:
  PTS mannose transporter subunit IIC; Catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14180
symbol: KOC89021.1
gene_biotype: protein_coding
description:
  PTS mannose transporter subunit IIAB; Catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; subunit IIA transfers a phosphoryl group to subunit IIB; subunit IIB transfers the phosphoryl group to the substrate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14190
symbol: KOC89023.1
gene_biotype: protein_coding
description:
  c-di-GMP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14195
symbol: KOC89024.1
gene_biotype: protein_coding
description:
  Serine dehydratase; Catalyzes the formation of pyruvate from serine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron-sulfur dependent L-serine dehydratase family.


ensembl_gene_id: NG42_14200
symbol: KOC89025.1
gene_biotype: protein_coding
description:
  NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family. PCD1 subfamily.


ensembl_gene_id: NG42_14205
symbol: pabB
gene_biotype: protein_coding
description:
  Para-aminobenzoate synthase component 1; catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and L-glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14210
symbol: KOC89027.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0181 family.


ensembl_gene_id: NG42_14220
symbol: KOC89029.1
gene_biotype: protein_coding
description:
  ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14235
symbol: KOC89031.1
gene_biotype: protein_coding
description:
  Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14240
symbol: rnd
gene_biotype: protein_coding
description:
  Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family.


ensembl_gene_id: NG42_14245
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: NG42_14250
symbol: KOC89034.1
gene_biotype: protein_coding
description:
  ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14255
symbol: minC
gene_biotype: protein_coding
description:
  Septum formation inhibitor; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: NG42_14265
symbol: KOC89037.1
gene_biotype: protein_coding
description:
  Lytic murein transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14275
symbol: KOC89039.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0260 family.


ensembl_gene_id: NG42_14280
symbol: dsbB
gene_biotype: protein_coding
description:
  Disulfide bond formation protein B; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family.


ensembl_gene_id: NG42_14285
symbol: nhaB
gene_biotype: protein_coding
description:
  Sodium/proton antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaB Na(+)/H(+) (TC 2.A.34) antiporter family.


ensembl_gene_id: NG42_14295
symbol: KOC89043.1
gene_biotype: protein_coding
description:
  SpoVR family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14300
symbol: KOC89044.1
gene_biotype: protein_coding
description:
  Amino acid dehydrogenase; Catalyzes the oxidative deamination of D-amino acids; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14305
symbol: KOC89045.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: NG42_14315
symbol: KOC89047.1
gene_biotype: protein_coding
description:
  Exopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14325
symbol: cvrA
gene_biotype: protein_coding
description:
  Potassium/proton antiporter; K(+)/H(+) antiporter that extrudes potassium in exchange for external protons and maintains the internal concentration of potassium under toxic levels; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. NhaP2 subfamily.


ensembl_gene_id: NG42_14340
symbol: KOC89051.1
gene_biotype: protein_coding
description:
  ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14345
symbol: KOC89052.1
gene_biotype: protein_coding
description:
  Amino acid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14375
symbol: KOC89057.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0229 family.


ensembl_gene_id: NG42_14385
symbol: KOC89059.1
gene_biotype: protein_coding
description:
  MltA-interacting protein MipA; Scaffolding protein for the murein polymerase MrcB and the lytic transglycosylase MltA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14395
symbol: KOC89061.1
gene_biotype: protein_coding
description:
  Glucose-6-phosphate 1-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glucose-6-phosphate 1-epimerase family.


ensembl_gene_id: NG42_14400
symbol: KOC89062.1
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: NG42_14405
symbol: msrB
gene_biotype: protein_coding
description:
  Methionine sulfoxide reductase B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MsrB Met sulfoxide reductase family.


ensembl_gene_id: NG42_14420
symbol: ansA
gene_biotype: protein_coding
description:
  Cytoplasmic asparaginase I; Converts asparagine to aspartate and ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14425
symbol: KOC89067.1
gene_biotype: protein_coding
description:
  Protease 4; SppA; catalyzes the degradation of cleaved signal peptides; essential to maintain secretion of mature proteins across the membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14435
symbol: topB
gene_biotype: protein_coding
description:
  DNA topoisomerase III; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA su [...]


ensembl_gene_id: NG42_14440
symbol: KOC89070.1
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14450
symbol: purU
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).


ensembl_gene_id: NG42_14455
symbol: KOC89072.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0225 family.


ensembl_gene_id: NG42_14465
symbol: rssB
gene_biotype: protein_coding
description:
  Response regulator of RpoS; Regulates the turnover of the sigma S factor (RpoS) by promoting its proteolysis in exponentially growing cells. Acts by binding and delivering RpoS to the ClpXP protease. RssB is not co- degraded with RpoS, but is released from the complex and can initiate a new cycle of RpoS recognition and degradation.


ensembl_gene_id: NG42_14470
symbol: KOC89075.1
gene_biotype: protein_coding
description:
  Together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase, an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate; regulates cellular levels of UDP-glucose; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14475
symbol: KOC89076.1
gene_biotype: protein_coding
description:
  UDP-glucose 6-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14480
symbol: KOC89077.1
gene_biotype: protein_coding
description:
  Protein CapI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14485
symbol: KOC89078.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the histone-like protein H-NS family.


ensembl_gene_id: NG42_14490
symbol: tdk
gene_biotype: protein_coding
description:
  Thymidine kinase; Catalyzes the formation of thymidine 5'-phosphate from thymidine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14495
symbol: KOC88863.1
gene_biotype: protein_coding
description:
  Pvp sensor (virulence sensor protein bvgs); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14510
symbol: KOC88866.1
gene_biotype: protein_coding
description:
  Chromosome replication initiation inhibitor protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: NG42_14520
symbol: KOC88868.1
gene_biotype: protein_coding
description:
  N-terminal cleavage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14525
symbol: KOC88869.1
gene_biotype: protein_coding
description:
  General secretion pathway protein GspG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14530
symbol: KOC88870.1
gene_biotype: protein_coding
description:
  Bacterial type II and III secretion system family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14555
symbol: KOC88875.1
gene_biotype: protein_coding
description:
  Type II secretion system protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14560
symbol: KOC88876.1
gene_biotype: protein_coding
description:
  Type II secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14565
symbol: KOC88877.1
gene_biotype: protein_coding
description:
  Invasion protein IagB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14575
symbol: KOC88878.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: NG42_14585
symbol: KOC88879.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 18 family.


ensembl_gene_id: NG42_14590
symbol: apaH
gene_biotype: protein_coding
description:
  Diadenosine tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.


ensembl_gene_id: NG42_14595
symbol: apaG
gene_biotype: protein_coding
description:
  Heavy metal transporter; Protein associated with Co2+ and Mg2+ efflux; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14600
symbol: ksgA
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: NG42_14605
symbol: pdxA
gene_biotype: protein_coding
description:
  4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PdxA family.


ensembl_gene_id: NG42_14610
symbol: surA
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation.


ensembl_gene_id: NG42_14615
symbol: lptD
gene_biotype: protein_coding
description:
  LPS biosynthesis protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.


ensembl_gene_id: NG42_14620
symbol: djlA
gene_biotype: protein_coding
description:
  Dna-J like membrane chaperone protein; Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB/RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host.


ensembl_gene_id: NG42_14630
symbol: rapA
gene_biotype: protein_coding
description:
  ATP-dependent helicase; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily.


ensembl_gene_id: NG42_14635
symbol: KOC88887.1
gene_biotype: protein_coding
description:
  Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14645
symbol: KOC88889.1
gene_biotype: protein_coding
description:
  Pentapeptide repeat; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14650
symbol: KOC88890.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG1357: Uncharacterized low-complexity proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14660
symbol: KOC88892.1
gene_biotype: protein_coding
description:
  Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14670
symbol: thiQ
gene_biotype: protein_coding
description:
  Thiamine ABC transporter ATP-binding protein; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family.


ensembl_gene_id: NG42_14675
symbol: thiP
gene_biotype: protein_coding
description:
  Permease; with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell; repressed in presence of exogenous thiamine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14680
symbol: tbpA
gene_biotype: protein_coding
description:
  Thiamine ABC transporter substrate-binding protein; Part of the thiamine and TPP transport system tbpA-thiPQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14685
symbol: KOC88897.1
gene_biotype: protein_coding
description:
  Transcriptional regulator SgrR; Activates sgrS under glucose-phosphate stress conditions; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14695
symbol: leuD
gene_biotype: protein_coding
description:
  Isopropylmalate isomerase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: NG42_14700
symbol: leuC
gene_biotype: protein_coding
description:
  Isopropylmalate isomerase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: NG42_14705
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: NG42_14710
symbol: leuA-2
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: NG42_14720
symbol: KOC88904.1
gene_biotype: protein_coding
description:
  Acetolactate synthase 3 catalytic subunit; Catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14725
symbol: ilvH
gene_biotype: protein_coding
description:
  Acetolactate synthase 3 regulatory subunit; With IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14730
symbol: KOC88906.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Binds D-fructose as an inducer; involved in regulation of operons for central pathways of carbon metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14735
symbol: mraZ
gene_biotype: protein_coding
description:
  Cell division protein MraZ; Negatively regulates its own expression and that of the subsequent genes in the proximal part of the division and cell wall (dcw) gene cluster. Acts by binding directly to DNA. May also regulate the expression of genes outside the dcw cluster.


ensembl_gene_id: NG42_14740
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: NG42_14745
symbol: ftsL
gene_biotype: protein_coding
description:
  Cell division protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: NG42_14750
symbol: ftsI
gene_biotype: protein_coding
description:
  Cell division protein FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum.


ensembl_gene_id: NG42_14755
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: NG42_14760
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: NG42_14765
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: NG42_14770
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: NG42_14775
symbol: ftsW
gene_biotype: protein_coding
description:
  Cell division protein FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily.


ensembl_gene_id: NG42_14780
symbol: murG
gene_biotype: protein_coding
description:
  UDP-diphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: NG42_14790
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: NG42_14795
symbol: ftsQ
gene_biotype: protein_coding
description:
  Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly.


ensembl_gene_id: NG42_14800
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: NG42_14805
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: NG42_14810
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: NG42_14815
symbol: secM
gene_biotype: protein_coding
description:
  Secretion monitor; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family.


ensembl_gene_id: NG42_14820
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not es [...]


ensembl_gene_id: NG42_14825
symbol: KOC88924.1
gene_biotype: protein_coding
description:
  Nucleoside triphosphate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family.


ensembl_gene_id: NG42_14830
symbol: yacG
gene_biotype: protein_coding
description:
  DNA gyrase inhibitor; Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C- terminal domain of GyrB, which probably disrupts DNA binding by the gyrase.


ensembl_gene_id: NG42_14835
symbol: zapD
gene_biotype: protein_coding
description:
  Hypothetical protein; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.


ensembl_gene_id: NG42_14840
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: NG42_14845
symbol: guaC
gene_biotype: protein_coding
description:
  Guanosine 5'-monophosphate oxidoreductase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides.


ensembl_gene_id: NG42_14850
symbol: KOC88929.1
gene_biotype: protein_coding
description:
  Type IV pilin biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14855
symbol: KOC88930.1
gene_biotype: protein_coding
description:
  Transporter HofB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14860
symbol: KOC88931.1
gene_biotype: protein_coding
description:
  Major pilin subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14865
symbol: KOC88932.1
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide pyrophosphorylase; Catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NadC/ModD family.


ensembl_gene_id: NG42_14870
symbol: KOC88933.1
gene_biotype: protein_coding
description:
  Amino acid deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14875
symbol: KOC88934.1
gene_biotype: protein_coding
description:
  N-acetyl-anhydromuranmyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14880
symbol: KOC88935.1
gene_biotype: protein_coding
description:
  Regulatory protein AmpE; Involved in regulation of beta-lactamase; putative signaling protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14885
symbol: KOC88936.1
gene_biotype: protein_coding
description:
  alpha-N-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 43 family.


ensembl_gene_id: NG42_14890
symbol: KOC88937.1
gene_biotype: protein_coding
description:
  Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14895
symbol: KOC88938.1
gene_biotype: protein_coding
description:
  Aromatic amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14900
symbol: pdhR
gene_biotype: protein_coding
description:
  Transcriptional regulator PdhR; Activates lctPRD operon; autoregulates itself through repression of pdhR-aceEF-lpdA operon; regulates pyruvate dehydrogenase complex; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14905
symbol: aceE
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: NG42_14910
symbol: aceF
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: NG42_14915
symbol: KOC88942.1
gene_biotype: protein_coding
description:
  E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14935
symbol: KOC88716.1
gene_biotype: protein_coding
description:
  ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14940
symbol: KOC88717.1
gene_biotype: protein_coding
description:
  Thiaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14945
symbol: KOC88718.1
gene_biotype: protein_coding
description:
  dNA-directed RNA polymerase, beta subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14955
symbol: KOC88720.1
gene_biotype: protein_coding
description:
  Alkane 1-monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14985
symbol: KOC88723.1
gene_biotype: protein_coding
description:
  Protocatechuate 3,4-dioxygenase; Extradiol catechol dioxygenase that catalyzes the oxidative cleavage of substituted catechols; part of the bacterial aromatic compound degradation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_14995
symbol: mtfA
gene_biotype: protein_coding
description:
  DgsA anti-repressor MtfA; Involved in the regulation of ptsG expression by binding and inactivating Mlc.


ensembl_gene_id: NG42_15010
symbol: queH
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: NG42_15015
symbol: KOC88728.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.


ensembl_gene_id: NG42_15030
symbol: KOC88730.1
gene_biotype: protein_coding
description:
  Very short patch repair endonuclease; May nick specific sequences that contain T:G mispairs resulting from m5C-deamination.


ensembl_gene_id: NG42_15050
symbol: KOC88734.1
gene_biotype: protein_coding
description:
  Repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15070
symbol: KOC88737.1
gene_biotype: protein_coding
description:
  Mannosyl-3-phosphoglycerate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15085
symbol: dsrB
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DsrB family.


ensembl_gene_id: NG42_15095
symbol: rcsA
gene_biotype: protein_coding
description:
  Capsule biosynthesis protein CapA; Component of the Rcs signaling system, which controls transcription of numerous genes. Binds to DNA to regulate expression of genes.


ensembl_gene_id: NG42_15100
symbol: fliR
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: NG42_15105
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: NG42_15110
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein flip; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: NG42_15115
symbol: KOC88745.1
gene_biotype: protein_coding
description:
  Flagellar assembly protein FliO; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15120
symbol: fliN
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.


ensembl_gene_id: NG42_15125
symbol: fliM
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.


ensembl_gene_id: NG42_15130
symbol: fliL
gene_biotype: protein_coding
description:
  Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: NG42_15140
symbol: fliJ
gene_biotype: protein_coding
description:
  Flagellar biosynthesis chaperone; Flagellar protein that affects chemotactic events. Belongs to the FliJ family.


ensembl_gene_id: NG42_15150
symbol: fliH
gene_biotype: protein_coding
description:
  Flagellar assembly protein H; Binds to and inhibits the function of flagella specific ATPase FliI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15155
symbol: fliG
gene_biotype: protein_coding
description:
  Flagellar motor switch protein G; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.


ensembl_gene_id: NG42_15160
symbol: KOC88754.1
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: NG42_15165
symbol: fliE
gene_biotype: protein_coding
description:
  Flagellar hook-basal body protein FliE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15180
symbol: KOC88758.1
gene_biotype: protein_coding
description:
  Virulence protein MsgA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15210
symbol: KOC88764.1
gene_biotype: protein_coding
description:
  Cytoplasmic alpha-amylase; Converts 1,4-alpha-D-glucans to maltodextrin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15215
symbol: KOC88765.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliT; Binds flagellar cap subunits (FliD) and seems to prevents their oligomerization prior to its translocation through the flagellum-specific type III export pathway; acts as a repressor of flagellar class 2 operons by preventing FlhD2C2 to bind the promoter and inhibiting the FlhD2C2-dependent transcription; member of the type III cytoplasmic chaperone family; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15220
symbol: fliS
gene_biotype: protein_coding
description:
  Flagellar protein FliS; Flagellin specific chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15225
symbol: fliD
gene_biotype: protein_coding
description:
  Flagellar capping protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: NG42_15230
symbol: KOC88768.1
gene_biotype: protein_coding
description:
  Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: NG42_15235
symbol: fliA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.


ensembl_gene_id: NG42_15240
symbol: KOC88770.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliZ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15245
symbol: dcyD
gene_biotype: protein_coding
description:
  Cysteine desulfhydrase; Catalyzes the alpha,beta-elimination reaction of D-cysteine and of several D-cysteine derivatives. It could be a defense mechanism against D-cysteine; Belongs to the ACC deaminase/D-cysteine desulfhydrase family.


ensembl_gene_id: NG42_15250
symbol: KOC88772.1
gene_biotype: protein_coding
description:
  Cystine transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: NG42_15270
symbol: putA
gene_biotype: protein_coding
description:
  Transcriptional regulator; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family.  In the N-terminal section; belongs to the proline dehydrogenase family.


ensembl_gene_id: NG42_15275
symbol: KOC88777.1
gene_biotype: protein_coding
description:
  Proline:sodium symporter PutP; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: NG42_15280
symbol: KOC88778.1
gene_biotype: protein_coding
description:
  Iron permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15285
symbol: KOC88779.1
gene_biotype: protein_coding
description:
  Ferrous iron transporter; With EfeUB forms an iron transport system which is silent in E. coli K-12 due to a mutation in EfeU; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15290
symbol: KOC88780.1
gene_biotype: protein_coding
description:
  Peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.


ensembl_gene_id: NG42_15305
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: NG42_15310
symbol: KOC88783.1
gene_biotype: protein_coding
description:
  Phosphinothricin acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15325
symbol: KOC88784.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15345
symbol: KOC88788.1
gene_biotype: protein_coding
description:
  Enterobactin ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: NG42_15355
symbol: KOC88790.1
gene_biotype: protein_coding
description:
  2-oxobutyrate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron/ascorbate-dependent oxidoreductase family.


ensembl_gene_id: NG42_15360
symbol: KOC88791.1
gene_biotype: protein_coding
description:
  Metal ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nlpA lipoprotein family.


ensembl_gene_id: NG42_15370
symbol: KOC88792.1
gene_biotype: protein_coding
description:
  Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15385
symbol: KOC88794.1
gene_biotype: protein_coding
description:
  Trehalose-6-phosphate synthase; Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-alpha-D- glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose- 6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor; Belongs to the glycosyltransferase 20 family.


ensembl_gene_id: NG42_15390
symbol: flhD
gene_biotype: protein_coding
description:
  Transcriptional regulator; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhD family.


ensembl_gene_id: NG42_15395
symbol: flhC
gene_biotype: protein_coding
description:
  Transcriptional regulator; Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhC family.


ensembl_gene_id: NG42_15400
symbol: KOC88797.1
gene_biotype: protein_coding
description:
  Flagellar motor protein MotA; With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15405
symbol: KOC88798.1
gene_biotype: protein_coding
description:
  Flagellar motor protein MotB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15410
symbol: KOC88799.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15415
symbol: KOC88800.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15420
symbol: KOC88801.1
gene_biotype: protein_coding
description:
  Chemotaxis protein; Serine sensor receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15445
symbol: hdfR
gene_biotype: protein_coding
description:
  Transcriptional regulator HdfR; Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon.


ensembl_gene_id: NG42_15455
symbol: KOC88620.1
gene_biotype: protein_coding
description:
  Among the AAA+ ATPases, the YifB protease family belongs to the Helix 2 insert clade; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15460
symbol: KOC88621.1
gene_biotype: protein_coding
description:
  Acetolactate synthase catalytic subunit; Catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15465
symbol: ilvM
gene_biotype: protein_coding
description:
  Acetolactate synthase 2 regulatory subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15470
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: NG42_15475
symbol: ilvD
gene_biotype: protein_coding
description:
  Dihydroxy-acid dehydratase; Catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IlvD/Edd family.


ensembl_gene_id: NG42_15480
symbol: ilvA
gene_biotype: protein_coding
description:
  Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: NG42_15485
symbol: KOC88626.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Participates in controlling several genes involved in isoleucine and valine biosynthesis; activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: NG42_15490
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: NG42_15495
symbol: KOC88628.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; Rotamase C; accelerates isomerization of the peptidyl prolyl bond; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15500
symbol: KOC88629.1
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase Rep; Single-stranded DNA-dependent ATPase; initiates unwinding at a nick in the DNA; involved in DNA replication; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15505
symbol: gppA
gene_biotype: protein_coding
description:
  Guanosine polyphosphate pyrophosphohydrolase; Catalyzes the conversion of pppGpp to ppGpp. Guanosine pentaphosphate (pppGpp) is a cytoplasmic signaling molecule which together with ppGpp controls the 'stringent response', an adaptive process that allows bacteria to respond to amino acid starvation, resulting in the coordinated regulation of numerous cellular activities.


ensembl_gene_id: NG42_15510
symbol: rhlB
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase RhlB; DEAD-box RNA helicase involved in RNA degradation. Has RNA- dependent ATPase activity and unwinds double-stranded RNA. Belongs to the DEAD box helicase family. RhlB subfamily.


ensembl_gene_id: NG42_15515
symbol: trxA
gene_biotype: protein_coding
description:
  Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thioredoxin family.


ensembl_gene_id: NG42_15520
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: NG42_15525
symbol: wecA
gene_biotype: protein_coding
description:
  UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase; Catalyzes the transfer of the GlcNAc-1-phosphate moiety from UDP-GlcNAc onto the carrier lipid undecaprenyl phosphate (C55-P), yielding GlcNAc-pyrophosphoryl-undecaprenyl (GlcNAc-PP-C55).


ensembl_gene_id: NG42_15530
symbol: wzzE
gene_biotype: protein_coding
description:
  Lipopolysaccharide biosynthesis protein WzzE; Modulates the polysaccharide chain length of enterobacterial common antigen (ECA); Belongs to the WzzB/Cld/Rol family.


ensembl_gene_id: NG42_15535
symbol: wecB
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase; Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) and thereby provides bacteria with UDP- N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues.


ensembl_gene_id: NG42_15540
symbol: wecC
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-mannosamine dehydrogenase; Catalyzes the four-electron oxidation of UDP-N-acetyl-D- mannosamine (UDP-ManNAc), reducing NAD(+) and releasing UDP-N- acetylmannosaminuronic acid (UDP-ManNAcA); Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. WecC subfamily.


ensembl_gene_id: NG42_15545
symbol: KOC88637.1
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: NG42_15550
symbol: KOC88638.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: NG42_15555
symbol: wecD
gene_biotype: protein_coding
description:
  TDP-fucosamine acetyltransferase; Catalyzes the acetylation of dTDP-fucosamine (dTDP-4-amino- 4,6-dideoxy-D-galactose) to dTDP-Fuc4NAc, which is utilized in the biosynthesis of the enterobacterial common antigen (ECA). Belongs to the WecD family.


ensembl_gene_id: NG42_15560
symbol: wecE
gene_biotype: protein_coding
description:
  TDP-4-oxo-6-deoxy-D-glucose aminotransferase; Catalyzes the synthesis of dTDP-4-amino-4,6-dideoxy-D- galactose (dTDP-Fuc4N) from dTDP-4-keto-6-deoxy-D-glucose (dTDP-D- Glc4O) and L-glutamate; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: NG42_15565
symbol: wzxE
gene_biotype: protein_coding
description:
  O-antigen translocase; Mediates the transbilayer movement of Und-PP-GlcNAc-ManNAcA- Fuc4NAc (lipid III) from the inner to the outer leaflet of the cytoplasmic membrane during the assembly of enterobacterial common antigen (ECA); Belongs to the polysaccharide transport (PST) (TC 2.A.66.2) family.


ensembl_gene_id: NG42_15570
symbol: wecF
gene_biotype: protein_coding
description:
  4-alpha-L-fucosyltransferase; Catalyzes the synthesis of Und-PP-GlcNAc-ManNAcA-Fuc4NAc (Lipid III), the third lipid-linked intermediate involved in ECA synthesis; Belongs to the glycosyltransferase 56 family.


ensembl_gene_id: NG42_15575
symbol: wzyE
gene_biotype: protein_coding
description:
  Common antigen polymerase; Probably involved in the polymerization of enterobacterial common antigen (ECA) trisaccharide repeat units; Belongs to the WzyE family.


ensembl_gene_id: NG42_15580
symbol: wecG
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-mannosaminuronic acid transferase; Catalyzes the synthesis of Und-PP-GlcNAc-ManNAcA (Lipid II), the second lipid-linked intermediate involved in enterobacterial common antigen (ECA) synthesis.


ensembl_gene_id: NG42_15605
symbol: KOC88645.1
gene_biotype: protein_coding
description:
  Protoheme IX biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15610
symbol: KOC88688.1
gene_biotype: protein_coding
description:
  uroporphyrin-III methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15615
symbol: hemD
gene_biotype: protein_coding
description:
  uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: NG42_15620
symbol: hemC
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: NG42_15625
symbol: cyaA
gene_biotype: protein_coding
description:
  Adenylate cyclase; Catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15635
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: NG42_15645
symbol: xerC
gene_biotype: protein_coding
description:
  Site-specific tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Binds cooperatively to specific DNA consensus sequences that are separated from XerD binding sites by a short central region, forming the heterotetrameric XerC-XerD complex that recombines DNA substrates. The complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. In the complex XerC specifical [...]


ensembl_gene_id: NG42_15650
symbol: KOC88651.1
gene_biotype: protein_coding
description:
  Flavin mononucleotide phosphatase; YigB; member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15655
symbol: uvrD
gene_biotype: protein_coding
description:
  DNA-dependent helicase II; Unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15660
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium transporter CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: NG42_15665
symbol: KOC88654.1
gene_biotype: protein_coding
description:
  AbrB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15670
symbol: KOC88691.1
gene_biotype: protein_coding
description:
  Chloramphenical resistance permease RarD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15680
symbol: KOC88656.1
gene_biotype: protein_coding
description:
  Phospholipase A; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family.


ensembl_gene_id: NG42_15685
symbol: KOC88657.1
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecQ; Functions in blocking illegitimate recombination, enhancing topoisomerase activity, initiating SOS signaling and clearing blocked replication forks; component of the RecF recombinational pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15695
symbol: rhtB
gene_biotype: protein_coding
description:
  Homoserine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15700
symbol: KOC88660.1
gene_biotype: protein_coding
description:
  Lysophospholipase L2; Lecithinase B; catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine; can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15710
symbol: glpQ
gene_biotype: protein_coding
description:
  Glycerophosphodiester phosphodiesterase; Hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols; periplasmic; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15715
symbol: glpT
gene_biotype: protein_coding
description:
  Sn-glycerol-3-phosphate transporter; Catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15730
symbol: KOC88665.1
gene_biotype: protein_coding
description:
  Homocysteine-binding; positive regulator of metA, metE and metH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: NG42_15735
symbol: metE
gene_biotype: protein_coding
description:
  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.


ensembl_gene_id: NG42_15740
symbol: KOC88667.1
gene_biotype: protein_coding
description:
  Carboxymethylenebutenolidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15745
symbol: KOC88668.1
gene_biotype: protein_coding
description:
  Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the PNP/UDP phosphorylase family.


ensembl_gene_id: NG42_15750
symbol: KOC88669.1
gene_biotype: protein_coding
description:
  DNA recombination protein RmuC; YigN; nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence; transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15755
symbol: ubiE
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: NG42_15765
symbol: ubiB
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis protein UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis.


ensembl_gene_id: NG42_15770
symbol: tatA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: NG42_15775
symbol: tatB
gene_biotype: protein_coding
description:
  Translocase; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.


ensembl_gene_id: NG42_15780
symbol: tatC
gene_biotype: protein_coding
description:
  Twin-arginine protein translocation system subunit TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: NG42_15785
symbol: tatD
gene_biotype: protein_coding
description:
  DNase TatD; 3'-5' exonuclease that prefers single-stranded DNA and RNA. May play a role in the H(2)O(2)-induced DNA damage repair. Belongs to the metallo-dependent hydrolases superfamily. TatD-type hydrolase family. TatD subfamily.


ensembl_gene_id: NG42_15790
symbol: KOC88677.1
gene_biotype: protein_coding
description:
  Delta-aminolevulinic acid dehydratase; Catalyzes the formation of porphobilinogen from 5-aminolevulinate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ALAD family.


ensembl_gene_id: NG42_15795
symbol: rfaH
gene_biotype: protein_coding
description:
  Transcriptional regulator; Enhances distal genes transcription elongation in a specialized subset of operons that encode extracytoplasmic components. RfaH is recruited into a multi-component RNA polymerase complex by the ops element, which is a short conserved DNA sequence located downstream of the main promoter of these operons. Once bound, RfaH suppresses pausing and inhibits Rho-dependent and intrinsic termination at a subset of sites. Termination signals are bypassed, which allows complete synthesis of long RNA chains.


ensembl_gene_id: NG42_15800
symbol: ubiD
gene_biotype: protein_coding
description:
  3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis.


ensembl_gene_id: NG42_15805
symbol: fre
gene_biotype: protein_coding
description:
  NAD(P)H-flavin reductase; catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide; in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15815
symbol: fadB
gene_biotype: protein_coding
description:
  Multifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.


ensembl_gene_id: NG42_15830
symbol: KOC88685.1
gene_biotype: protein_coding
description:
  Potassium transporter; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.


ensembl_gene_id: NG42_15835
symbol: KOC88686.1
gene_biotype: protein_coding
description:
  Protoporphyrinogen oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15890
symbol: KOC88540.1
gene_biotype: protein_coding
description:
  Type VI secretion protein ImpG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15905
symbol: KOC88542.1
gene_biotype: protein_coding
description:
  Type VI secretion system lysozyme-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15925
symbol: KOC88545.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0246 family.


ensembl_gene_id: NG42_15935
symbol: mogA
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MogA; Forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15950
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: NG42_15955
symbol: KOC88550.1
gene_biotype: protein_coding
description:
  Lipoprotein bor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15960
symbol: nhaA
gene_biotype: protein_coding
description:
  pH-dependent sodium/proton antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.


ensembl_gene_id: NG42_15965
symbol: nhaR
gene_biotype: protein_coding
description:
  Na+/H+ antiporter regulatory protein; activates the genes nhaA and osmC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: NG42_15975
symbol: KOC88554.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribF family.


ensembl_gene_id: NG42_15980
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: NG42_15985
symbol: lspA
gene_biotype: protein_coding
description:
  Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: NG42_15990
symbol: KOC88557.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; Rotamase; accelerates isomerization of the peptidyl prolyl bond, involved in the folding of proteases; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_15995
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis.


ensembl_gene_id: NG42_16010
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: NG42_16015
symbol: carA
gene_biotype: protein_coding
description:
  Carbamoyl phosphate synthase small subunit; Catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16020
symbol: carB
gene_biotype: protein_coding
description:
  Carbamoyl phosphate synthase large subunit; Four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16030
symbol: folA
gene_biotype: protein_coding
description:
  Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: NG42_16080
symbol: KOC88587.1
gene_biotype: protein_coding
description:
  EvpB family type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16090
symbol: KOC88568.1
gene_biotype: protein_coding
description:
  Lysozyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16095
symbol: KOC88569.1
gene_biotype: protein_coding
description:
  Type VI secretion protein TssF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16105
symbol: KOC88570.1
gene_biotype: protein_coding
description:
  Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family.


ensembl_gene_id: NG42_16165
symbol: KOC88578.1
gene_biotype: protein_coding
description:
  Transcriptional initiation protein Tat; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16175
symbol: KOC88579.1
gene_biotype: protein_coding
description:
  Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16190
symbol: KOC88436.1
gene_biotype: protein_coding
description:
  Magnesium ABC transporter ATPase; P-type; involved in magnesium transport into the cytoplasm; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16195
symbol: KOC88508.1
gene_biotype: protein_coding
description:
  Bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aconitase/IPM isomerase family.


ensembl_gene_id: NG42_16200
symbol: KOC88437.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0231 family.


ensembl_gene_id: NG42_16220
symbol: speD
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 2 subfamily.


ensembl_gene_id: NG42_16225
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: NG42_16235
symbol: KOC88443.1
gene_biotype: protein_coding
description:
  Multicopper oxidase; Laccase; copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16245
symbol: KOC88445.1
gene_biotype: protein_coding
description:
  Methionine gamma-lyase; Catalyzes the formation of methanethiol and 2-ocobutanoate from L-methionine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16250
symbol: KOC88446.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of inosine monophosphate from hypoxanthine and 5-phospho-alpha-D-ribose 1-diphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: NG42_16270
symbol: panD
gene_biotype: protein_coding
description:
  Aspartate decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: NG42_16275
symbol: panC
gene_biotype: protein_coding
description:
  Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: NG42_16285
symbol: KOC88452.1
gene_biotype: protein_coding
description:
  2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; Catalyzes the formation of 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate from 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine and ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16290
symbol: pcnB
gene_biotype: protein_coding
description:
  poly(A) polymerase I; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: NG42_16295
symbol: gluQ
gene_biotype: protein_coding
description:
  glutamyl-Q tRNA(Asp) ligase; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily.


ensembl_gene_id: NG42_16300
symbol: dksA
gene_biotype: protein_coding
description:
  RNA polymerase-binding transcription factor; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression.


ensembl_gene_id: NG42_16305
symbol: sfsA
gene_biotype: protein_coding
description:
  Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SfsA family.


ensembl_gene_id: NG42_16310
symbol: KOC88456.1
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: NG42_16315
symbol: KOC88457.1
gene_biotype: protein_coding
description:
  Similar in sequence to the ATP-dependent RNA helicase HrpA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16320
symbol: mrcB
gene_biotype: protein_coding
description:
  Bifunctional glycosyl transferase/transpeptidase; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits).


ensembl_gene_id: NG42_16325
symbol: KOC88459.1
gene_biotype: protein_coding
description:
  Iron-hydroxamate transporter ATP-binding subunit; Part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16330
symbol: KOC88460.1
gene_biotype: protein_coding
description:
  Iron-hydroxamate transporter substrate-binding subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16335
symbol: KOC88461.1
gene_biotype: protein_coding
description:
  Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16345
symbol: KOC88463.1
gene_biotype: protein_coding
description:
  Glutamate-1-semialdehyde aminotransferase; Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16350
symbol: erpA
gene_biotype: protein_coding
description:
  Iron-sulfur cluster insertion protein ErpA; Required for insertion of 4Fe-4S clusters for at least IspG.


ensembl_gene_id: NG42_16360
symbol: btuF
gene_biotype: protein_coding
description:
  Vitamin B12-transporter protein BtuF; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC.


ensembl_gene_id: NG42_16365
symbol: mtnN
gene_biotype: protein_coding
description:
  5'-methylthioadenosine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Also cleaves 5'-deoxyadenosine, a toxic by-product of radical S-adenosylmethionine (SAM) enzymes, into 5-deoxyribose and adenine. Thus, is required for in vivo function of the radical SAM enzymes biotin synthase and lipoic acid synthase, that are inhibited by 5'-deoxyadenosine accumulation. Belongs to the PNP/U [...]


ensembl_gene_id: NG42_16370
symbol: dgt
gene_biotype: protein_coding
description:
  Deoxyguanosinetriphosphate triphosphohydrolase; dGTPase preferentially hydrolyzes dGTP over the other canonical NTPs; Belongs to the dGTPase family. Type 1 subfamily.


ensembl_gene_id: NG42_16375
symbol: KOC88469.1
gene_biotype: protein_coding
description:
  Serine endoprotease; Protease Do; required at high temperature; degrades damaged proteins; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family.


ensembl_gene_id: NG42_16380
symbol: KOC88470.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates the expression of the operons for the enzymes involved in galactarate, glucarate and glycerate utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16385
symbol: KOC88471.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0325 family.


ensembl_gene_id: NG42_16390
symbol: dapD
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transferase hexapeptide repeat family.


ensembl_gene_id: NG42_16395
symbol: KOC88473.1
gene_biotype: protein_coding
description:
  protein-PII uridylyltransferase; Catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16400
symbol: map-2
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: NG42_16405
symbol: rpsB
gene_biotype: protein_coding
description:
  30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family.


ensembl_gene_id: NG42_16410
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: NG42_16420
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: NG42_16425
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP).


ensembl_gene_id: NG42_16430
symbol: uppS
gene_biotype: protein_coding
description:
  UDP pyrophosphate synthase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di- trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide.


ensembl_gene_id: NG42_16435
symbol: cdsA
gene_biotype: protein_coding
description:
  Catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDS family.


ensembl_gene_id: NG42_16440
symbol: KOC88482.1
gene_biotype: protein_coding
description:
  Zinc metallopeptidase RseP; Catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16445
symbol: bamA
gene_biotype: protein_coding
description:
  Outer membrane protein assembly protein YaeT; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamD, the core component of the assembly machinery.


ensembl_gene_id: NG42_16450
symbol: KOC88484.1
gene_biotype: protein_coding
description:
  Molecular chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the skp family.


ensembl_gene_id: NG42_16455
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O- (hydroxytetradecanoyl)glucosamine using 3-hydroxytetradecanoyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell; Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: NG42_16460
symbol: fabZ
gene_biotype: protein_coding
description:
  hydroxymyristoyl-ACP dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: NG42_16465
symbol: lpxA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: NG42_16470
symbol: lpxB
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: NG42_16480
symbol: dnaE
gene_biotype: protein_coding
description:
  DNA polymerase III subunit alpha; Catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16485
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: NG42_16495
symbol: KOC88493.1
gene_biotype: protein_coding
description:
  Lysine decarboxylase LdcC; Constitutive; catalyzes the formation of cadaverine from lysine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16505
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine ligase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: NG42_16510
symbol: KOC88496.1
gene_biotype: protein_coding
description:
  Cytochrome C554; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16515
symbol: KOC88497.1
gene_biotype: protein_coding
description:
  Rho-binding antiterminator; Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16520
symbol: KOC88498.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0253 family.


ensembl_gene_id: NG42_16535
symbol: proS
gene_biotype: protein_coding
description:
  proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacy [...]


ensembl_gene_id: NG42_16540
symbol: KOC88502.1
gene_biotype: protein_coding
description:
  tRNA (adenine(37)-N6)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16545
symbol: rcsF
gene_biotype: protein_coding
description:
  Membrane protein; Essential component of the Rcs signaling system, which controls transcription of numerous genes. Plays a role in signal transduction from the cell surface to the histidine kinase RcsC. May detect outer membrane defects; Belongs to the RcsF family.


ensembl_gene_id: NG42_16550
symbol: metQ
gene_biotype: protein_coding
description:
  DL-methionine transporter substrate-binding subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nlpA lipoprotein family.


ensembl_gene_id: NG42_16555
symbol: KOC88505.1
gene_biotype: protein_coding
description:
  DL-methionine transporter permease subunit; Part of the MetNIQ methionine uptake system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16560
symbol: metN
gene_biotype: protein_coding
description:
  DL-methionine transporter ATP-binding subunit; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: NG42_16565
symbol: KOC88507.1
gene_biotype: protein_coding
description:
  D,D-heptose 1,7-bisphosphate phosphatase; Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16575
symbol: KOC88341.1
gene_biotype: protein_coding
description:
  DNA-3-methyladenine glycosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16595
symbol: KOC88344.1
gene_biotype: protein_coding
description:
  2-dehydro-3-deoxygluconokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16605
symbol: ghrB
gene_biotype: protein_coding
description:
  Bifunctional glyoxylate/hydroxypyruvate reductase B; Catalyzes the NADPH-dependent reduction of glyoxylate and hydroxypyruvate into glycolate and glycerate, respectively. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. GhrB subfamily.


ensembl_gene_id: NG42_16610
symbol: avtA
gene_biotype: protein_coding
description:
  Valine--pyruvate aminotransferase; Transaminase C; catalyzes transamination of alanine, valine, and 2-aminobutyrate with their respective 2-keto acids; also catalyzes terminal step in valine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16615
symbol: KOC88347.1
gene_biotype: protein_coding
description:
  Acetylserine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16620
symbol: ibpA
gene_biotype: protein_coding
description:
  Heat shock protein IbpA; Associates with aggregated proteins, together with IbpB, to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress. Aggregated proteins bound to the IbpAB complex are more efficiently refolded and reactivated by the ATP-dependent chaperone systems ClpB and DnaK/DnaJ/GrpE. Its activity is ATP-independent.


ensembl_gene_id: NG42_16630
symbol: KOC88349.1
gene_biotype: protein_coding
description:
  Biopolymer transporter Tol; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16645
symbol: dgoD
gene_biotype: protein_coding
description:
  Galactonate dehydratase; Catalyzes the dehydration of D-galactonate to 2-keto-3-deoxy- D-galactonate.


ensembl_gene_id: NG42_16650
symbol: KOC88352.1
gene_biotype: protein_coding
description:
  2-dehydro-3-deoxy-6-phosphogalactonate aldolase; Catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16655
symbol: KOC88353.1
gene_biotype: protein_coding
description:
  2-oxo-3-deoxygalactonate kinase; Catalyzes the formation of 2-dehydro-3-deoxy-D-galactonate 6-phosphate from 2-dehydro-3-deoxy-D-galactonate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16660
symbol: KOC88354.1
gene_biotype: protein_coding
description:
  Sugar phosphatase; YidA; catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate), mannose 1-phosphate and p-nitrophenyl phosphate; hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form; member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16670
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: NG42_16675
symbol: recF
gene_biotype: protein_coding
description:
  Recombination protein F; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: NG42_16680
symbol: KOC88358.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of  [...]


ensembl_gene_id: NG42_16685
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: NG42_16690
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: NG42_16695
symbol: yidC
gene_biotype: protein_coding
description:
  Membrane protein insertase; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: NG42_16700
symbol: trmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: NG42_16710
symbol: KOC88364.1
gene_biotype: protein_coding
description:
  Phosphopantetheinyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the P-Pant transferase superfamily.


ensembl_gene_id: NG42_16715
symbol: KOC88365.1
gene_biotype: protein_coding
description:
  Adenine permease PurP; Involved in the transport or adenine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16720
symbol: KOC88366.1
gene_biotype: protein_coding
description:
  6-phosphogluconate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16730
symbol: KOC88368.1
gene_biotype: protein_coding
description:
  Transcriptional regulator PhoU; Part of the phosphate (Pho) regulon, which plays a key role in phosphate homeostasis. PhoU is essential for the repression of the Pho regulon at high phosphate conditions.


ensembl_gene_id: NG42_16740
symbol: pstA
gene_biotype: protein_coding
description:
  Phosphate transporter permease subunit PtsA; Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16745
symbol: pstC
gene_biotype: protein_coding
description:
  Phosphate transporter permease subunit PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: NG42_16750
symbol: KOC88372.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter substrate-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.


ensembl_gene_id: NG42_16760
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: NG42_16765
symbol: glmU
gene_biotype: protein_coding
description:
  Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: NG42_16770
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: NG42_16775
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: NG42_16780
symbol: atpG
gene_biotype: protein_coding
description:
  ATP F0F1 synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: NG42_16785
symbol: atpA
gene_biotype: protein_coding
description:
  ATP F0F1 synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: NG42_16790
symbol: atpH
gene_biotype: protein_coding
description:
  ATP F0F1 synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: NG42_16795
symbol: atpF
gene_biotype: protein_coding
description:
  ATP F0F1 synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: NG42_16800
symbol: atpE
gene_biotype: protein_coding
description:
  ATP F0F1 synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: NG42_16805
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: NG42_16810
symbol: KOC88384.1
gene_biotype: protein_coding
description:
  ATP F0F1 synthase subunit I; Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16815
symbol: gidB
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.


ensembl_gene_id: NG42_16820
symbol: mnmG
gene_biotype: protein_coding
description:
  Hypothetical protein; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: NG42_16825
symbol: KOC88387.1
gene_biotype: protein_coding
description:
  FMN-binding protein MioC; An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16830
symbol: KOC88388.1
gene_biotype: protein_coding
description:
  Transcriptional repressor of asnA which codes for aspartate-ammonia ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16840
symbol: viaA
gene_biotype: protein_coding
description:
  Hypothetical protein; Contains a von Willibrand factor type A domain; stimulates the ATPase activity of RavA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16845
symbol: KOC88391.1
gene_biotype: protein_coding
description:
  ATPase; Interacts with LdcI, lysine decarboxylase; may be active in late log/ early stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16850
symbol: trkD
gene_biotype: protein_coding
description:
  Potassium transport protein Kup; Responsible for the low-affinity transport of potassium into the cell, with the probable concomitant uptake of protons (symport system); Belongs to the HAK/KUP transporter (TC 2.A.72) family.


ensembl_gene_id: NG42_16855
symbol: KOC88393.1
gene_biotype: protein_coding
description:
  Sensor protein QseC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16860
symbol: KOC88394.1
gene_biotype: protein_coding
description:
  Response regulator in two-component regulatory system with QseC; regulates FlhCD which is the master regulator for flagella and motility genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16865
symbol: KOC88395.1
gene_biotype: protein_coding
description:
  Protein ygiW precursor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16875
symbol: KOC88397.1
gene_biotype: protein_coding
description:
  Alpha-acetolactate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the alpha-acetolactate decarboxylase family.


ensembl_gene_id: NG42_16880
symbol: KOC88398.1
gene_biotype: protein_coding
description:
  Acetolactate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.


ensembl_gene_id: NG42_16890
symbol: rbsA-2
gene_biotype: protein_coding
description:
  Sugar ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.


ensembl_gene_id: NG42_16895
symbol: rbsC
gene_biotype: protein_coding
description:
  Ribose ABC transporter permease; Functions to transport ribose at high affinity; forms a complex with RbsA2C2B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: NG42_16900
symbol: KOC88409.1
gene_biotype: protein_coding
description:
  D-ribose transporter subunit RbsB; Periplasmic substrate-binding component of the ATP-dependent ribose transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16905
symbol: rbsK
gene_biotype: protein_coding
description:
  Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: NG42_16910
symbol: KOC88403.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis; is involved in regulation of purB, purC, purEK, purHD, purL, purMN and guaBA expression; binds hypoxanthine and guanine as inducers; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16915
symbol: KOC88404.1
gene_biotype: protein_coding
description:
  Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.


ensembl_gene_id: NG42_16935
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: NG42_16940
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: NG42_16945
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: NG42_16950
symbol: bamB
gene_biotype: protein_coding
description:
  Membrane biogenesis protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: NG42_16960
symbol: hisS
gene_biotype: protein_coding
description:
  histidine--tRNA ligase; Catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16965
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: NG42_16970
symbol: rodZ
gene_biotype: protein_coding
description:
  Cytoskeletal protein RodZ; Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis.


ensembl_gene_id: NG42_16975
symbol: KOC88226.1
gene_biotype: protein_coding
description:
  Pilus assembly protein PilW; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_16980
symbol: rlmN
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: NG42_16985
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: NG42_16990
symbol: KOC88229.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein 1C; Penicillin-insensitive transglycosylase/transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17000
symbol: sseA
gene_biotype: protein_coding
description:
  3-mercaptopyruvate sulfurtransferase; Catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17005
symbol: KOC88232.1
gene_biotype: protein_coding
description:
  Enhanced serine sensitivity protein SseB; Enhances serine sensitivity caused by inhibition of homoserine dehydrogenase I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17015
symbol: iscS
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins.


ensembl_gene_id: NG42_17020
symbol: iscR
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins.


ensembl_gene_id: NG42_17025
symbol: trmJ
gene_biotype: protein_coding
description:
  tRNA (cytidine/uridine-2'-O-)-methyltransferase; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: NG42_17030
symbol: KOC88237.1
gene_biotype: protein_coding
description:
  Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the inositol monophosphatase superfamily.


ensembl_gene_id: NG42_17035
symbol: KOC88238.1
gene_biotype: protein_coding
description:
  Nickel transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NiCoT transporter (TC 2.A.52) family.


ensembl_gene_id: NG42_17045
symbol: KOC88285.1
gene_biotype: protein_coding
description:
  Stationary phase inducible protein CsiE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17050
symbol: KOC88239.1
gene_biotype: protein_coding
description:
  3-phenylpropionic acid transporter; Transporter of 3-phenylpropionate across the inner membrane; member of the major facilitator superfamily of transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17055
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: NG42_17060
symbol: hmp
gene_biotype: protein_coding
description:
  Dihydropteridine reductase; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily.


ensembl_gene_id: NG42_17070
symbol: KOC88243.1
gene_biotype: protein_coding
description:
  Response regulator GlrR; With GlrK is part of a two-component signal transduction system regulating glmY; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17080
symbol: KOC88244.1
gene_biotype: protein_coding
description:
  Histidine kinase; Part of the GlrKR two-component signal transduction system involved in the regulation of glmY; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17085
symbol: KOC88245.1
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase; Catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17090
symbol: mltF
gene_biotype: protein_coding
description:
  Murein transglycosylase; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella.


ensembl_gene_id: NG42_17095
symbol: tadA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: NG42_17115
symbol: KOC88250.1
gene_biotype: protein_coding
description:
  Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17120
symbol: acpS
gene_biotype: protein_coding
description:
  4'-phosphopantetheinyl transferase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: NG42_17125
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: NG42_17135
symbol: era
gene_biotype: protein_coding
description:
  Hypothetical protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: NG42_17140
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: NG42_17145
symbol: KOC88256.1
gene_biotype: protein_coding
description:
  Signal peptidase I; Catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.


ensembl_gene_id: NG42_17150
symbol: lepA
gene_biotype: protein_coding
description:
  Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: NG42_17155
symbol: KOC88258.1
gene_biotype: protein_coding
description:
  SoxR reducing system protein RseC; Involved in the reduction of the SoxR iron-sulfur cluster; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17160
symbol: rseB
gene_biotype: protein_coding
description:
  Anti-sigma E factor; Periplasmic protein; interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17165
symbol: KOC88260.1
gene_biotype: protein_coding
description:
  anti-RNA polymerase sigma factor SigE; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic protea [...]


ensembl_gene_id: NG42_17170
symbol: KOC88261.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor RpoE; Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: NG42_17180
symbol: KOC88263.1
gene_biotype: protein_coding
description:
  SAM-dependent methlyltransferase; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC).


ensembl_gene_id: NG42_17185
symbol: srmB
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase SrmB; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit at low temperature. Exhibits RNA-stimulated ATP hydrolysis and RNA unwinding activity; Belongs to the DEAD box helicase family. SrmB subfamily.


ensembl_gene_id: NG42_17190
symbol: grcA
gene_biotype: protein_coding
description:
  Autonomous glycyl radical cofactor GrcA; Acts as a radical domain for damaged PFL and possibly other radical proteins.


ensembl_gene_id: NG42_17195
symbol: ung
gene_biotype: protein_coding
description:
  uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: NG42_17200
symbol: grpE
gene_biotype: protein_coding
description:
  Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...]


ensembl_gene_id: NG42_17205
symbol: ppnK
gene_biotype: protein_coding
description:
  Inorganic polyphosphate kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: NG42_17220
symbol: KOC88271.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0125 (RnfH) family.


ensembl_gene_id: NG42_17225
symbol: KOC88272.1
gene_biotype: protein_coding
description:
  Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17230
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: NG42_17235
symbol: KOC88274.1
gene_biotype: protein_coding
description:
  Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.


ensembl_gene_id: NG42_17260
symbol: KOC88279.1
gene_biotype: protein_coding
description:
  CI repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17275
symbol: KOC88282.1
gene_biotype: protein_coding
description:
  DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17320
symbol: KOC88156.1
gene_biotype: protein_coding
description:
  Siderophore synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17355
symbol: KOC88160.1
gene_biotype: protein_coding
description:
  Multidrug ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17365
symbol: KOC88161.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.


ensembl_gene_id: NG42_17380
symbol: pqqB
gene_biotype: protein_coding
description:
  Pyrroloquinoline quinone biosynthesis protein PqqB; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family.


ensembl_gene_id: NG42_17385
symbol: pqqC
gene_biotype: protein_coding
description:
  Pyrroloquinoline quinone biosynthesis protein PqqC; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ.


ensembl_gene_id: NG42_17390
symbol: pqqD
gene_biotype: protein_coding
description:
  Pyrroloquinoline quinone biosynthesis protein PqqD; Functions as a PqqA binding protein and presents PqqA to PqqE, in the pyrroloquinoline quinone (PQQ) biosynthetic pathway.


ensembl_gene_id: NG42_17395
symbol: pqqE
gene_biotype: protein_coding
description:
  Pyrroloquinoline quinone biosynthesis protein PqqE; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).


ensembl_gene_id: NG42_17400
symbol: KOC88166.1
gene_biotype: protein_coding
description:
  Pyrroloquinoline quinone biosynthesis protein F; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17440
symbol: KOC88173.1
gene_biotype: protein_coding
description:
  Protein-disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17450
symbol: KOC88174.1
gene_biotype: protein_coding
description:
  Ketosteroid isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17460
symbol: KOC88176.1
gene_biotype: protein_coding
description:
  Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17490
symbol: KOC88181.1
gene_biotype: protein_coding
description:
  Quinoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17500
symbol: KOC88198.1
gene_biotype: protein_coding
description:
  FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17505
symbol: KOC88183.1
gene_biotype: protein_coding
description:
  PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17560
symbol: KOC88037.1
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17575
symbol: KOC88039.1
gene_biotype: protein_coding
description:
  Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17585
symbol: KOC88040.1
gene_biotype: protein_coding
description:
  GNAT family acetyltraansferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17600
symbol: KOC88043.1
gene_biotype: protein_coding
description:
  CopG family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17625
symbol: KOC88048.1
gene_biotype: protein_coding
description:
  Ferrous iron transporter B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17655
symbol: KOC88053.1
gene_biotype: protein_coding
description:
  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17675
symbol: KOC88055.1
gene_biotype: protein_coding
description:
  EF hand domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17680
symbol: KOC88056.1
gene_biotype: protein_coding
description:
  Phosphoglycerol transferase I; Catalyzes the transfer of phosphoglycerol to the glucan backbone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17685
symbol: KOC88057.1
gene_biotype: protein_coding
description:
  Tautomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17705
symbol: KOC88060.1
gene_biotype: protein_coding
description:
  Chloramphenicol acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17725
symbol: KOC88063.1
gene_biotype: protein_coding
description:
  Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IUNH family.


ensembl_gene_id: NG42_17740
symbol: KOC88066.1
gene_biotype: protein_coding
description:
  Glyoxalase/bleomycin resistance protein/dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17745
symbol: KOC88067.1
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17750
symbol: KOC88068.1
gene_biotype: protein_coding
description:
  Iron reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17770
symbol: rsmC
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle; Belongs to the methyltransferase superfamily. RsmC family.


ensembl_gene_id: NG42_17775
symbol: KOC88072.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit psi; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown.


ensembl_gene_id: NG42_17780
symbol: rimI
gene_biotype: protein_coding
description:
  Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.


ensembl_gene_id: NG42_17785
symbol: KOC88074.1
gene_biotype: protein_coding
description:
  dUMP phosphatase; Manganese-dependent 5'-nucleotidase; specific for 5'-UMP, 5'-dUMP, and 5'-dTMP; member of haloacid dehalogenase (HAD)-like hydrolase superfamily; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17795
symbol: KOC88075.1
gene_biotype: protein_coding
description:
  Type VI secretion lipoprotein/VasD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17875
symbol: KOC88090.1
gene_biotype: protein_coding
description:
  Type VI secretion system protein ImpG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17885
symbol: KOC88092.1
gene_biotype: protein_coding
description:
  Molecular chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family.


ensembl_gene_id: NG42_17925
symbol: btuB
gene_biotype: protein_coding
description:
  Vitamin B12/cobalamin outer membrane transporter; Involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space. It derives its energy for transport by interacting with the trans- periplasmic membrane protein TonB; Belongs to the TonB-dependent receptor family. BtuB (TC 1.B.14.3.1) subfamily.


ensembl_gene_id: NG42_17930
symbol: trmA
gene_biotype: protein_coding
description:
  tRNA (uracil-5-)-methyltransferase; Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA).


ensembl_gene_id: NG42_17940
symbol: fabR
gene_biotype: protein_coding
description:
  Transcriptional regulator; Represses the transcription of fabB, involved in unsaturated fatty acid (UFA) biosynthesis. By controlling UFA production, FabR directly influences the physical properties of the membrane bilayer.


ensembl_gene_id: NG42_17945
symbol: sthA
gene_biotype: protein_coding
description:
  Pyridine nucleotide transhydrogenase; Conversion of NADPH, generated by peripheral catabolic pathways, to NADH, which can enter the respiratory chain for energy generation; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.


ensembl_gene_id: NG42_17950
symbol: KOC87956.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG, gor, ahpC, ahpF, oxyS, dps, fur and grxA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: NG42_17955
symbol: KOC87957.1
gene_biotype: protein_coding
description:
  Glutathione peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17960
symbol: argH
gene_biotype: protein_coding
description:
  Argininosuccinate lyase; Catalyzes the formation of arginine from (N-L-arginino)succinate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17965
symbol: argG
gene_biotype: protein_coding
description:
  Argininosuccinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the argininosuccinate synthase family. Type 1 subfamily.


ensembl_gene_id: NG42_17970
symbol: KOC87960.1
gene_biotype: protein_coding
description:
  Acetylglutamate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17975
symbol: argC-2
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: NG42_17980
symbol: KOC87962.1
gene_biotype: protein_coding
description:
  Acetylornithine deacetylase; Catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_17985
symbol: ppc
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.


ensembl_gene_id: NG42_17990
symbol: metF
gene_biotype: protein_coding
description:
  MTHFR; catalyzes NADH-linked reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: NG42_17995
symbol: metL
gene_biotype: protein_coding
description:
  Aspartate kinase; Multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18000
symbol: KOC87966.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18005
symbol: metJ
gene_biotype: protein_coding
description:
  Transcriptional repressor protein MetJ; This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis; Belongs to the MetJ family.


ensembl_gene_id: NG42_18015
symbol: priA
gene_biotype: protein_coding
description:
  Primosome assembly protein PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: NG42_18025
symbol: ftsN
gene_biotype: protein_coding
description:
  Cell division protein FtsN; Essential cell division protein that activates septal peptidoglycan synthesis and constriction of the cell. Acts on both sides of the membrane, via interaction with FtsA in the cytoplasm and interaction with the FtsQBL complex in the periplasm. These interactions may induce a conformational switch in both FtsA and FtsQBL, leading to septal peptidoglycan synthesis by FtsI and associated synthases.


ensembl_gene_id: NG42_18030
symbol: hslV
gene_biotype: protein_coding
description:
  ATP-dependent protease subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: NG42_18035
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: NG42_18040
symbol: rraA
gene_biotype: protein_coding
description:
  Ribonuclease activity regulator protein RraA; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome. Modulates RNA-binding and helicase activities of the degradosome.


ensembl_gene_id: NG42_18045
symbol: zapB
gene_biotype: protein_coding
description:
  Septal ring assembly protein ZapB; Non-essential, abundant cell division factor that is required for proper Z-ring formation. It is recruited early to the divisome by direct interaction with FtsZ, stimulating Z-ring assembly and thereby promoting cell division earlier in the cell cycle. Its recruitment to the Z-ring requires functional FtsA or ZipA.


ensembl_gene_id: NG42_18050
symbol: KOC87976.1
gene_biotype: protein_coding
description:
  Glycerol uptake facilitator GlpF; Involved in the transport of glycerol into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MIP/aquaporin (TC 1.A.8) family.


ensembl_gene_id: NG42_18055
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.


ensembl_gene_id: NG42_18060
symbol: KOC87977.1
gene_biotype: protein_coding
description:
  Fructose 1,6-bisphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18065
symbol: emrD
gene_biotype: protein_coding
description:
  Multidrug efflux protein involved in adaptation to low energy shock; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18070
symbol: KOC87979.1
gene_biotype: protein_coding
description:
  ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18085
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: NG42_18090
symbol: KOC87982.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18095
symbol: KOC87983.1
gene_biotype: protein_coding
description:
  Sulfate transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18100
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: NG42_18115
symbol: cpxP
gene_biotype: protein_coding
description:
  Periplasmic repressor CpxP; Repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA; CpxP is degraded by DegP protease especially in the presence of misfolded substrates; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18120
symbol: KOC87987.1
gene_biotype: protein_coding
description:
  Response regulator in two-component regulatory system with CpxA; part of the envelope stress response system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18125
symbol: cpxA
gene_biotype: protein_coding
description:
  Two-component sensor protein; Part of two-component CpxA/CpxR system; senses envelope stress; upregulates a number of periplasmic folding and trafficking factors; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18130
symbol: trmL
gene_biotype: protein_coding
description:
  rRNA methylase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.


ensembl_gene_id: NG42_18135
symbol: cysE
gene_biotype: protein_coding
description:
  Catalyzes the O-acetylation of serine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18140
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: NG42_18145
symbol: secB
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.


ensembl_gene_id: NG42_18150
symbol: KOC87993.1
gene_biotype: protein_coding
description:
  Glutaredoxin; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.


ensembl_gene_id: NG42_18160
symbol: KOC87995.1
gene_biotype: protein_coding
description:
  Peptidase M37; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18170
symbol: tdh
gene_biotype: protein_coding
description:
  L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family.


ensembl_gene_id: NG42_18175
symbol: kbl
gene_biotype: protein_coding
description:
  2-amino-3-ketobutyrate CoA ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.


ensembl_gene_id: NG42_18180
symbol: rfaD
gene_biotype: protein_coding
description:
  ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily.


ensembl_gene_id: NG42_18185
symbol: KOC87999.1
gene_biotype: protein_coding
description:
  ADP-heptose--LPS heptosyltransferase; Catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18190
symbol: KOC88000.1
gene_biotype: protein_coding
description:
  ADP-heptose--LPS heptosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18210
symbol: KOC88003.1
gene_biotype: protein_coding
description:
  Deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18220
symbol: KOC88005.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: NG42_18225
symbol: KOC88006.1
gene_biotype: protein_coding
description:
  Glycosyl transferase family 9; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18230
symbol: KOC88007.1
gene_biotype: protein_coding
description:
  Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18235
symbol: KOC88008.1
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonic acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: NG42_18240
symbol: KOC88009.1
gene_biotype: protein_coding
description:
  Lipopolysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18245
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: NG42_18250
symbol: mutM
gene_biotype: protein_coding
description:
  formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: NG42_18255
symbol: rpmG
gene_biotype: protein_coding
description:
  50S ribosomal protein L33; In Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18260
symbol: rpmB
gene_biotype: protein_coding
description:
  50S ribosomal protein L28; Required for 70S ribosome assembly; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family.


ensembl_gene_id: NG42_18265
symbol: KOC88014.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0758 family. YicR subfamily.


ensembl_gene_id: NG42_18270
symbol: KOC87878.1
gene_biotype: protein_coding
description:
  Iron ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: NG42_18275
symbol: hmuV
gene_biotype: protein_coding
description:
  Hemin importer ATP-binding subunit; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.


ensembl_gene_id: NG42_18280
symbol: selO
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.


ensembl_gene_id: NG42_18295
symbol: btuD
gene_biotype: protein_coding
description:
  Vitamin B12-transporter ATPase; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system.


ensembl_gene_id: NG42_18300
symbol: btuE
gene_biotype: protein_coding
description:
  Glutathione peroxidase; Non-specific peroxidase that can use thioredoxin or glutathione as a reducing agent.


ensembl_gene_id: NG42_18305
symbol: btuC
gene_biotype: protein_coding
description:
  Vitamin B12 import system permease BtuC; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane.


ensembl_gene_id: NG42_18325
symbol: ihfA
gene_biotype: protein_coding
description:
  Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: NG42_18330
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanine--tRNA ligase; Catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18335
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: NG42_18340
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: NG42_18345
symbol: rpmI
gene_biotype: protein_coding
description:
  50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL35 family.


ensembl_gene_id: NG42_18350
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: NG42_18355
symbol: thrS
gene_biotype: protein_coding
description:
  threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: NG42_18360
symbol: KOC87896.1
gene_biotype: protein_coding
description:
  Sugar:proton symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18400
symbol: KOC87902.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the fructosamine kinase family.


ensembl_gene_id: NG42_18410
symbol: KOC87904.1
gene_biotype: protein_coding
description:
  2-deoxyglucose-6-phosphatase; YniC; catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate, mannose 6-phosphate and p-nitrophenyl phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18415
symbol: KOC87937.1
gene_biotype: protein_coding
description:
  5-keto-4-deoxyuronate isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.


ensembl_gene_id: NG42_18420
symbol: KOC87905.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18430
symbol: KOC87939.1
gene_biotype: protein_coding
description:
  L-cystine transporter tcyP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: NG42_18440
symbol: KOC87908.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Osmotically-inducible lipoprotein E; activator of ntr-like gene protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18450
symbol: nadE
gene_biotype: protein_coding
description:
  NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.


ensembl_gene_id: NG42_18455
symbol: KOC87911.1
gene_biotype: protein_coding
description:
  Nucleotide excision repair endonuclease; 3' incision activity; acts with UvrC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18460
symbol: KOC87912.1
gene_biotype: protein_coding
description:
  Periplasmic protein induced by stress response via Cpx and BaeSR system; similar to CpxP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18465
symbol: astE
gene_biotype: protein_coding
description:
  Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily.


ensembl_gene_id: NG42_18470
symbol: astB
gene_biotype: protein_coding
description:
  Succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2).


ensembl_gene_id: NG42_18475
symbol: astD
gene_biotype: protein_coding
description:
  A high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18480
symbol: astA
gene_biotype: protein_coding
description:
  Arginine succinyltransferase; Catalyzes the transfer of succinyl-CoA to arginine to produce N(2)-succinylarginine.


ensembl_gene_id: NG42_18510
symbol: KOC87933.1
gene_biotype: protein_coding
description:
  Invasin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18550
symbol: KOC87927.1
gene_biotype: protein_coding
description:
  CysG; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the precorrin methyltransferase family.


ensembl_gene_id: NG42_18555
symbol: KOC87928.1
gene_biotype: protein_coding
description:
  Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.


ensembl_gene_id: NG42_18565
symbol: KOC87929.1
gene_biotype: protein_coding
description:
  Nitrate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18570
symbol: KOC87930.1
gene_biotype: protein_coding
description:
  Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18580
symbol: metAS
gene_biotype: protein_coding
description:
  Homoserine O-succinyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine; Belongs to the MetA family.


ensembl_gene_id: NG42_18585
symbol: KOC87820.1
gene_biotype: protein_coding
description:
  Malate synthase; Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18590
symbol: KOC87821.1
gene_biotype: protein_coding
description:
  Isocitrate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18595
symbol: aceK
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase; Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation.


ensembl_gene_id: NG42_18605
symbol: KOC87823.1
gene_biotype: protein_coding
description:
  Transcriptional repressor IclR; Regulates the glyoxylate bypass operon (aceBAK), which encodes isocitrate lyase, malate synthase and isocitrate dehydrogenase kinase/phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18610
symbol: metH
gene_biotype: protein_coding
description:
  B12-dependent methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.


ensembl_gene_id: NG42_18620
symbol: KOC87866.1
gene_biotype: protein_coding
description:
  Bile acid:sodium symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18625
symbol: KOC87825.1
gene_biotype: protein_coding
description:
  Aspartate kinase; Catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; functions in amino acid biosynthesis; lysine sensitive; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family.


ensembl_gene_id: NG42_18630
symbol: pgi
gene_biotype: protein_coding
description:
  Glucose-6-phosphate isomerase; Functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GPI family.


ensembl_gene_id: NG42_18655
symbol: psiE
gene_biotype: protein_coding
description:
  Phosphate-starvation-inducible protein PsiE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18660
symbol: malG
gene_biotype: protein_coding
description:
  Maltose transporter permease; With MalKFE is involved in the transport of maltose into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18665
symbol: malF
gene_biotype: protein_coding
description:
  Maltose transporter membrane protein; With MalKGE is involved in maltose transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18670
symbol: malE
gene_biotype: protein_coding
description:
  Sugar ABC transporter substrate-binding protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins. Belongs to the bacterial solute-binding protein 1 family.


ensembl_gene_id: NG42_18675
symbol: malK
gene_biotype: protein_coding
description:
  Maltose/maltodextrin transporter ATP-binding protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Maltooligosaccharide importer (TC 3.A.1.1.1) family.


ensembl_gene_id: NG42_18680
symbol: lamB
gene_biotype: protein_coding
description:
  Maltoporin; Porin involved in the transport of maltose and maltodextrins; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18685
symbol: KOC87836.1
gene_biotype: protein_coding
description:
  Maltose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18690
symbol: ubiC
gene_biotype: protein_coding
description:
  Chorismate--pyruvate lyase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway.


ensembl_gene_id: NG42_18695
symbol: ubiA
gene_biotype: protein_coding
description:
  4-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.


ensembl_gene_id: NG42_18720
symbol: plsB
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate acyltransferase; PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GPAT/DAPAT family.


ensembl_gene_id: NG42_18725
symbol: KOC87841.1
gene_biotype: protein_coding
description:
  Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.


ensembl_gene_id: NG42_18730
symbol: lexA
gene_biotype: protein_coding
description:
  LexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. Binds to the 16 bp palindromic sequence 5'-CTGTATATATATACAG-3'. In the presence of single- stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: NG42_18735
symbol: KOC87843.1
gene_biotype: protein_coding
description:
  Damage-inducible protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18745
symbol: KOC87845.1
gene_biotype: protein_coding
description:
  Zinc uptake transcriptional repressor; Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family.


ensembl_gene_id: NG42_18750
symbol: KOC87846.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein TraF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18755
symbol: dusA
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily.


ensembl_gene_id: NG42_18760
symbol: KOC87848.1
gene_biotype: protein_coding
description:
  Phage-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18780
symbol: KOC87851.1
gene_biotype: protein_coding
description:
  DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: NG42_18795
symbol: KOC87854.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18815
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: NG42_18820
symbol: KOC87859.1
gene_biotype: protein_coding
description:
  Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: NG42_18825
symbol: KOC87868.1
gene_biotype: protein_coding
description:
  Converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: NG42_18835
symbol: KOC87860.1
gene_biotype: protein_coding
description:
  Cytochrome P450; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.


ensembl_gene_id: NG42_18845
symbol: KOC87862.1
gene_biotype: protein_coding
description:
  Arylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18855
symbol: KOC87807.1
gene_biotype: protein_coding
description:
  Secretion protein EspA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18935
symbol: KOC87777.1
gene_biotype: protein_coding
description:
  Secretion system apparatus protein SsaU; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18945
symbol: KOC87779.1
gene_biotype: protein_coding
description:
  Type III secretion system protein SsaS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18970
symbol: KOC87784.1
gene_biotype: protein_coding
description:
  Type III secretion protein ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18975
symbol: KOC87808.1
gene_biotype: protein_coding
description:
  Secretion system apparatus protein SsaV; With SsaC forms part of a protein export system across the inner and outer cell membranes; part of the Salmonella pathogenicity island 2; part of the type III secretion system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_18980
symbol: KOC87785.1
gene_biotype: protein_coding
description:
  Secretion system apparatus; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19000
symbol: KOC87810.1
gene_biotype: protein_coding
description:
  Outer membrane secretin SsaC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19015
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: NG42_19040
symbol: fbp
gene_biotype: protein_coding
description:
  Catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FBPase class 1 family.


ensembl_gene_id: NG42_19045
symbol: mpl
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate. Belongs to the MurCDEF family. Mpl subfamily.


ensembl_gene_id: NG42_19050
symbol: KOC87796.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0307 family.


ensembl_gene_id: NG42_19055
symbol: pmbA
gene_biotype: protein_coding
description:
  Peptidase PmbA; Protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19060
symbol: KOC87811.1
gene_biotype: protein_coding
description:
  Glycine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19085
symbol: KOC87802.1
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19090
symbol: KOC87803.1
gene_biotype: protein_coding
description:
  L-seryl-tRNA selenium transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19095
symbol: KOC87804.1
gene_biotype: protein_coding
description:
  2-dehydro-3-deoxyphosphooctonate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19110
symbol: KOC87717.1
gene_biotype: protein_coding
description:
  Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: NG42_19115
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: NG42_19120
symbol: slmA
gene_biotype: protein_coding
description:
  Division inhibitor protein; Required for nucleoid occlusion (NO) phenomenon, which prevents Z-ring formation and cell division over the nucleoid. Acts as a DNA-associated cell division inhibitor that binds simultaneously chromosomal DNA and FtsZ, and disrupts the assembly of FtsZ polymers. SlmA-DNA-binding sequences (SBS) are dispersed on non-Ter regions of the chromosome, preventing FtsZ polymerization at these regions.


ensembl_gene_id: NG42_19135
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: NG42_19140
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: NG42_19145
symbol: KOC87724.1
gene_biotype: protein_coding
description:
  Nucleoside permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19160
symbol: KOC87726.1
gene_biotype: protein_coding
description:
  Cell division protein Fic; Adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins.


ensembl_gene_id: NG42_19165
symbol: KOC87727.1
gene_biotype: protein_coding
description:
  exo-poly-alpha-D-galacturonosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 28 family.


ensembl_gene_id: NG42_19180
symbol: KOC87730.1
gene_biotype: protein_coding
description:
  Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19195
symbol: ligB
gene_biotype: protein_coding
description:
  NAD-dependent DNA ligase LigB; Catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. Belongs to the NAD-dependent DNA ligase family. LigB subfamily.


ensembl_gene_id: NG42_19205
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: NG42_19215
symbol: trmH
gene_biotype: protein_coding
description:
  tRNA guanosine-2'-O-methyltransferase; Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: NG42_19220
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: NG42_19230
symbol: KOC87739.1
gene_biotype: protein_coding
description:
  Xanthine permease XanP; High-affinity transporter for xanthine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19245
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: NG42_19255
symbol: KOC87744.1
gene_biotype: protein_coding
description:
  alpha-D-glucose-1-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19260
symbol: KOC87745.1
gene_biotype: protein_coding
description:
  GTP-binding protein TypA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19265
symbol: glnA
gene_biotype: protein_coding
description:
  Forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues; addition of adenylyl groups results in inactivation of the enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19270
symbol: glnL
gene_biotype: protein_coding
description:
  Nitrogen regulation protein NR(II); Sensory histidine kinase in two-component regulatory system with GlnG; acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19275
symbol: glnG
gene_biotype: protein_coding
description:
  Nitrogen regulation protein NR(I); Response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes; interacts with sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19280
symbol: KOC87749.1
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: NG42_19285
symbol: yihI
gene_biotype: protein_coding
description:
  GTPase activator; A GTPase-activating protein (GAP) that modifies Der/EngA GTPase function. May play a role in ribosome biogenesis. Belongs to the YihI family.


ensembl_gene_id: NG42_19290
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: NG42_19295
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: NG42_19305
symbol: srkA
gene_biotype: protein_coding
description:
  Serine/threonine protein kinase; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response.


ensembl_gene_id: NG42_19315
symbol: mobA
gene_biotype: protein_coding
description:
  Molybdopterin-guanine dinucleotide biosynthesis protein MobA; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.


ensembl_gene_id: NG42_19320
symbol: KOC87755.1
gene_biotype: protein_coding
description:
  Molybdopterin-guanine dinucleotide biosynthesis protein B; In Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19355
symbol: KOC87679.1
gene_biotype: protein_coding
description:
  Growth inhibitor PemK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19360
symbol: KOC87680.1
gene_biotype: protein_coding
description:
  Nucleoid-associated protein NdpA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19365
symbol: KOC87681.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0352 family.


ensembl_gene_id: NG42_19410
symbol: KOC87689.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the P-Pant transferase superfamily.


ensembl_gene_id: NG42_19450
symbol: KOC87695.1
gene_biotype: protein_coding
description:
  Phenolic acid decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19460
symbol: KOC87696.1
gene_biotype: protein_coding
description:
  Multidrug transporter membrane component/ATP-binding component; Efflux pump for the antibacterial peptide microcin J25; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19465
symbol: KOC87697.1
gene_biotype: protein_coding
description:
  Alpha-ketoglutarate-dependent dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19470
symbol: KOC87698.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.


ensembl_gene_id: NG42_19480
symbol: KOC87700.1
gene_biotype: protein_coding
description:
  Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19515
symbol: KOC87649.1
gene_biotype: protein_coding
description:
  Methyl-accepting protein IV; Mediates taxis toward dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19520
symbol: KOC87616.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.


ensembl_gene_id: NG42_19525
symbol: cheB
gene_biotype: protein_coding
description:
  Chemotaxis protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: NG42_19530
symbol: KOC87618.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheY; Chemotaxis regulator that, when phosphorylated, interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19535
symbol: KOC87619.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).


ensembl_gene_id: NG42_19540
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: NG42_19545
symbol: KOC87653.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19550
symbol: KOC87650.1
gene_biotype: protein_coding
description:
  Flagellar protein flhE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19555
symbol: argS
gene_biotype: protein_coding
description:
  arginyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19570
symbol: cutC
gene_biotype: protein_coding
description:
  Copper homeostasis protein CutC; Participates in the control of copper homeostasis. Belongs to the CutC family.


ensembl_gene_id: NG42_19590
symbol: KOC87627.1
gene_biotype: protein_coding
description:
  Threonine transporter RhtB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19595
symbol: cmoB
gene_biotype: protein_coding
description:
  tRNA methyltransferase; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs.


ensembl_gene_id: NG42_19600
symbol: cmoA
gene_biotype: protein_coding
description:
  tRNA methyltransferase; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM).


ensembl_gene_id: NG42_19615
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: NG42_19620
symbol: nudB
gene_biotype: protein_coding
description:
  Catalyzes the formation of dihydroneopterin phosphate from dihydroneopterin triphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19630
symbol: ruvC
gene_biotype: protein_coding
description:
  Holliday junction resolvase; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: NG42_19635
symbol: ruvA
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: NG42_19640
symbol: ruvB
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: NG42_19645
symbol: znuB
gene_biotype: protein_coding
description:
  High-affinity zinc transporter membrane component; Involved in transport of zinc(II) with ZnuA and C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19650
symbol: znuC
gene_biotype: protein_coding
description:
  Zinc ABC transporter ATPase; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.


ensembl_gene_id: NG42_19655
symbol: znuA
gene_biotype: protein_coding
description:
  Zinc ABC transporter substrate-binding protein; Involved in transport of zinc(II) with ZnuA and C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19665
symbol: lpxM
gene_biotype: protein_coding
description:
  Lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase; Catalyzes the transfer of myristate from myristoyl-acyl carrier protein (ACP) to Kdo(2)-(lauroyl)-lipid IV(A) to form Kdo(2)- lipid A.


ensembl_gene_id: NG42_19680
symbol: KOC87644.1
gene_biotype: protein_coding
description:
  Alcaligin biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19685
symbol: KOC87645.1
gene_biotype: protein_coding
description:
  Pyridoxal-dependent decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19695
symbol: KOC87647.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Represses the expression of the zwf, eda, glp and gap; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19700
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: NG42_19710
symbol: KOC87580.1
gene_biotype: protein_coding
description:
  Catalyzes the hydrolysis of allophanate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19725
symbol: KOC87582.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19730
symbol: KOC87609.1
gene_biotype: protein_coding
description:
  Urea ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: NG42_19735
symbol: KOC87583.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: NG42_19740
symbol: KOC87584.1
gene_biotype: protein_coding
description:
  Urea ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19750
symbol: KOC87586.1
gene_biotype: protein_coding
description:
  Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: NG42_19760
symbol: KOC87588.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19765
symbol: KOC87589.1
gene_biotype: protein_coding
description:
  Iron utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19775
symbol: KOC87591.1
gene_biotype: protein_coding
description:
  NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.


ensembl_gene_id: NG42_19780
symbol: KOC87592.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Catalyzes the formation of NAD(+) from nicotinamide ribonucleotide; catalyzes the formation of nicotinamide mononucleotide from nicotinamide riboside; also has a regulatory function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19785
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: NG42_19790
symbol: serB
gene_biotype: protein_coding
description:
  Phosphoserine phosphatase; Catalyzes the formation of serine from O-phosphoserine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19805
symbol: deoD
gene_biotype: protein_coding
description:
  Purine nucleoside phosphorylase; Catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19810
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: NG42_19815
symbol: deoA
gene_biotype: protein_coding
description:
  Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family.


ensembl_gene_id: NG42_19820
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 2 subfamily.


ensembl_gene_id: NG42_19825
symbol: KOC87601.1
gene_biotype: protein_coding
description:
  Nucleoside transporter NupC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family.


ensembl_gene_id: NG42_19830
symbol: KOC87602.1
gene_biotype: protein_coding
description:
  Deoxyribonuclease YjjV; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19840
symbol: KOC87604.1
gene_biotype: protein_coding
description:
  Stress-response protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19850
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: NG42_19875
symbol: KOC87541.1
gene_biotype: protein_coding
description:
  Alpha-ketoglutarate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19880
symbol: KOC87542.1
gene_biotype: protein_coding
description:
  Lipoprotein; Required for high salt suppression of motility; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19885
symbol: pssA
gene_biotype: protein_coding
description:
  Catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19890
symbol: KOC87544.1
gene_biotype: protein_coding
description:
  Protein acetyltransferase; Catalyzes the acetylation of lysine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19895
symbol: KOC87545.1
gene_biotype: protein_coding
description:
  DTW domain-containing protein YfiP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19900
symbol: KOC87546.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thioredoxin family.


ensembl_gene_id: NG42_19905
symbol: KOC87547.1
gene_biotype: protein_coding
description:
  Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: NG42_19910
symbol: emrB
gene_biotype: protein_coding
description:
  Multidrug resistance protein B; Multidrug MFS transporte; with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.


ensembl_gene_id: NG42_19915
symbol: KOC87549.1
gene_biotype: protein_coding
description:
  With ErmA and TolC forms a multidrug efflux system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19920
symbol: KOC87550.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux; negative regulator of the multidrug operon emrAB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19935
symbol: proX
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter substrate-binding protein; With ProVW, part of the high-affinity transport system for the osmoprotectant glycine betaine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19940
symbol: KOC87554.1
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter permease; With ProVX is involved in the high-affinity uptake of glycine betaine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19945
symbol: KOC87555.1
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter ATP-binding protein; With ProWX is involved in the high-affinity uptake of glycine betaine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19950
symbol: KOC87556.1
gene_biotype: protein_coding
description:
  Ribonucleotide-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.


ensembl_gene_id: NG42_19960
symbol: nrdI
gene_biotype: protein_coding
description:
  Ribonucleotide reductase stimulatory protein; Probably involved in ribonucleotide reductase function.


ensembl_gene_id: NG42_19985
symbol: KOC87563.1
gene_biotype: protein_coding
description:
  Homocysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_19995
symbol: KOC87565.1
gene_biotype: protein_coding
description:
  Spermidine acetyltransferase; Catalyzes the formation of N(1)- and N(8)-acetylspermidine from spermidine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20005
symbol: KOC87566.1
gene_biotype: protein_coding
description:
  Isopropylmalate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20060
symbol: KOC87499.1
gene_biotype: protein_coding
description:
  Acetaldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.


ensembl_gene_id: NG42_20080
symbol: oppB
gene_biotype: protein_coding
description:
  Oligopeptide transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20085
symbol: KOC87504.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter permease; With OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20090
symbol: oppD
gene_biotype: protein_coding
description:
  Oligopeptide transporter ATP-binding component; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: NG42_20095
symbol: KOC87506.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter ATP-binding protein; With OppABCD is involved in the transport of oligopeptides; OppF and OppD are ATP-binding proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20100
symbol: KOC87507.1
gene_biotype: protein_coding
description:
  Highly acidic protein; the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi); binds heat-unstable protein (HU-alpha) which is a histone-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0263 family.


ensembl_gene_id: NG42_20105
symbol: cls
gene_biotype: protein_coding
description:
  Cardiolipin synthetase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.


ensembl_gene_id: NG42_20115
symbol: KOC87510.1
gene_biotype: protein_coding
description:
  Energy transducer TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.


ensembl_gene_id: NG42_20125
symbol: KOC87512.1
gene_biotype: protein_coding
description:
  Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.


ensembl_gene_id: NG42_20140
symbol: KOC87515.1
gene_biotype: protein_coding
description:
  Membrane protein; Receptor for colicin S4; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20155
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: NG42_20160
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: NG42_20165
symbol: KOC87520.1
gene_biotype: protein_coding
description:
  Indole-3-glycerol phosphate synthase; Monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20170
symbol: KOC87521.1
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20175
symbol: KOC87522.1
gene_biotype: protein_coding
description:
  Anthranilate synthase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20180
symbol: KOC87523.1
gene_biotype: protein_coding
description:
  With component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20185
symbol: KOC87524.1
gene_biotype: protein_coding
description:
  S-adenosylmethionine tRNA ribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20190
symbol: KOC87525.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SUA5 family.


ensembl_gene_id: NG42_20240
symbol: purH
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazolecarboxamide formyltransferase; Involved in de novo purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20245
symbol: purD
gene_biotype: protein_coding
description:
  Phosphoribosylamine--glycine ligase; Catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GARS family.


ensembl_gene_id: NG42_20255
symbol: KOC87465.1
gene_biotype: protein_coding
description:
  DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: NG42_20265
symbol: nfi
gene_biotype: protein_coding
description:
  Endonuclease V; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA.


ensembl_gene_id: NG42_20270
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: NG42_20275
symbol: nudC
gene_biotype: protein_coding
description:
  NADH pyrophosphatase; Can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH; requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family. NudC subfamily.


ensembl_gene_id: NG42_20280
symbol: rsd
gene_biotype: protein_coding
description:
  anti-RNA polymerase sigma 70 factor; Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase.


ensembl_gene_id: NG42_20285
symbol: thiC
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.


ensembl_gene_id: NG42_20290
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: NG42_20305
symbol: KOC87474.1
gene_biotype: protein_coding
description:
  Hydroxyisourate hydrolase; Catalyzes the formation of 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline from 5-hydroxyisourate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.


ensembl_gene_id: NG42_20310
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: NG42_20320
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: NG42_20325
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: NG42_20330
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: NG42_20335
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: NG42_20340
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antiterminator NusG; Participates in transcription elongation, termination and antitermination. In the absence of Rho, increases the rate of transcription elongation by the RNA polymerase (RNAP), probably by partially suppressing pausing. In the presence of Rho, modulates most Rho-dependent termination events by interacting with the RNAP to render the complex more susceptible to the termination activity of Rho. May be required to overcome a kinetic limitation of Rho to function at certain terminators. Also involved in ribosomal RNA transcriptional antitermination; Belongs [...]


ensembl_gene_id: NG42_20345
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family.


ensembl_gene_id: NG42_20380
symbol: coaA
gene_biotype: protein_coding
description:
  Pantothenate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20405
symbol: KOC87492.1
gene_biotype: protein_coding
description:
  Fimbria A protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20415
symbol: birA
gene_biotype: protein_coding
description:
  biotin--[acetyl-CoA-carboxylase] synthetase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon.


ensembl_gene_id: NG42_20425
symbol: rlmI
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Specifically methylates the cytosine at position 1962 (m5C1962) of 23S rRNA.


ensembl_gene_id: NG42_20430
symbol: hspQ
gene_biotype: protein_coding
description:
  Heat shock protein HspQ; Involved in the degradation of certain denaturated proteins, including DnaA, during heat shock stress; Belongs to the HspQ family.


ensembl_gene_id: NG42_20445
symbol: KOC87435.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0319 family.


ensembl_gene_id: NG42_20455
symbol: helD
gene_biotype: protein_coding
description:
  DNA helicase IV; Catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20470
symbol: KOC87440.1
gene_biotype: protein_coding
description:
  Competence protein TfoX; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20475
symbol: sulA
gene_biotype: protein_coding
description:
  Hypothetical protein; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division.


ensembl_gene_id: NG42_20480
symbol: KOC87442.1
gene_biotype: protein_coding
description:
  Membrane protein; OmpA is believed to be a porin, involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli, and it is known to play a role as a phage receptor, a mediator of F-factor dependent conjugation, and in maintaining the structural shape of the outer membrane; 3a; II*; G; d; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.


ensembl_gene_id: NG42_20485
symbol: matP
gene_biotype: protein_coding
description:
  Ter macrodomain organizer matS-binding protein; Required for spatial organization of the terminus region of the chromosome (Ter macrodomain) during the cell cycle. Prevents early segregation of duplicated Ter macrodomains during cell division. Binds specifically to matS, which is a 13 bp signature motif repeated within the Ter macrodomain.


ensembl_gene_id: NG42_20490
symbol: KOC87443.1
gene_biotype: protein_coding
description:
  Lon protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20495
symbol: fabA
gene_biotype: protein_coding
description:
  3-hydroxydecanoyl-ACP dehydratase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length.


ensembl_gene_id: NG42_20505
symbol: KOC87446.1
gene_biotype: protein_coding
description:
  Paraquat-inducible protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20510
symbol: KOC87447.1
gene_biotype: protein_coding
description:
  Paraquat-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20515
symbol: KOC87448.1
gene_biotype: protein_coding
description:
  ABC transporter ATPase; Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20520
symbol: rlmL
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family.


ensembl_gene_id: NG42_20545
symbol: KOC87382.1
gene_biotype: protein_coding
description:
  Bacterioferritin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20550
symbol: KOC87383.1
gene_biotype: protein_coding
description:
  Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.


ensembl_gene_id: NG42_20560
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: NG42_20565
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.


ensembl_gene_id: NG42_20575
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: NG42_20580
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: NG42_20585
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: NG42_20590
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: NG42_20595
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: NG42_20600
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: NG42_20605
symbol: rpmC
gene_biotype: protein_coding
description:
  50S ribosomal protein L29; One of the stabilizing components for the large ribosomal subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20610
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: NG42_20615
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: NG42_20620
symbol: rplX
gene_biotype: protein_coding
description:
  50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: NG42_20625
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: NG42_20630
symbol: rpsN
gene_biotype: protein_coding
description:
  30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: NG42_20635
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: NG42_20640
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: NG42_20645
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: NG42_20650
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: NG42_20655
symbol: rpmD
gene_biotype: protein_coding
description:
  50S ribosomal protein L30; L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20660
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: NG42_20665
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: NG42_20670
symbol: rpmJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L36; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL36 family.


ensembl_gene_id: NG42_20675
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: NG42_20680
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: NG42_20685
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: NG42_20690
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: NG42_20695
symbol: rplQ
gene_biotype: protein_coding
description:
  50S ribosomal protein L17; Is a component of the macrolide binding site in the peptidyl transferase center; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20705
symbol: zntR
gene_biotype: protein_coding
description:
  Zinc-responsive transcriptional regulator; Mediates expression of the zinc export protein ZntA in response to high levels of zinc; member of MerR family of transcriptional regulators; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20715
symbol: mscL
gene_biotype: protein_coding
description:
  Large-conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: NG42_20720
symbol: trkA
gene_biotype: protein_coding
description:
  Involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20725
symbol: rsmB
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: NG42_20730
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: NG42_20735
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: NG42_20740
symbol: KOC87418.1
gene_biotype: protein_coding
description:
  DNA processing protein DprA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20745
symbol: smg
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Smg family.


ensembl_gene_id: NG42_20755
symbol: tsaC
gene_biotype: protein_coding
description:
  tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-)/CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate.


ensembl_gene_id: NG42_20760
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: NG42_20780
symbol: clsC
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the synthesis of cardiolipin (CL) (diphosphatidylglycerol) from phosphatidylglycerol (PG) and phosphatidylethanolamine (PE); Belongs to the phospholipase D family. Cardiolipin synthase subfamily. ClsC sub-subfamily.


ensembl_gene_id: NG42_20785
symbol: opgC
gene_biotype: protein_coding
description:
  Glucans biosynthesis protein; Necessary for the succinyl substitution of periplasmic glucans. Could catalyze the transfer of succinyl residues from the cytoplasmic side of the membrane to the nascent glucan backbones on the periplasmic side of the membrane.


ensembl_gene_id: NG42_20790
symbol: mdoG
gene_biotype: protein_coding
description:
  Glucan biosynthesis protein G; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs).


ensembl_gene_id: NG42_20805
symbol: KOC87361.1
gene_biotype: protein_coding
description:
  secY/secA suppressor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20830
symbol: lpxL
gene_biotype: protein_coding
description:
  Lipid A biosynthesis lauroyl acyltransferase; Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)-(lauroyl)-lipid IV(A).


ensembl_gene_id: NG42_20840
symbol: KOC87367.1
gene_biotype: protein_coding
description:
  Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0176 family.


ensembl_gene_id: NG42_20850
symbol: KOC87368.1
gene_biotype: protein_coding
description:
  Cytochrome B561; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20860
symbol: solA
gene_biotype: protein_coding
description:
  N-methyltryptophan oxidase; Catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde; FAD-binding; can also catalyze the demethylation of other N-methyl amino acids; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20865
symbol: bssS
gene_biotype: protein_coding
description:
  Biofilm formation regulatory protein BssS; BssS; regulator of biofilm through signal secretion; disruption of this gene in Escherichia coli led to effects on biofilm formation, alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20875
symbol: KOC87373.1
gene_biotype: protein_coding
description:
  Damage-inducible protein I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20895
symbol: mdtH
gene_biotype: protein_coding
description:
  Multidrug resistance protein MdtH; Confers resistance to norfloxacin and enoxacin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20900
symbol: KOC87378.1
gene_biotype: protein_coding
description:
  Ribosomal-protein-alanine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20905
symbol: KOC87379.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0502 family.


ensembl_gene_id: NG42_20910
symbol: KOC87329.1
gene_biotype: protein_coding
description:
  Cl- channel voltage-gated family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20915
symbol: KOC87330.1
gene_biotype: protein_coding
description:
  Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20920
symbol: rlmG
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA.


ensembl_gene_id: NG42_20925
symbol: fadH
gene_biotype: protein_coding
description:
  2,4-dienoyl-CoA reductase; Catalyzes the formation of trans-2- enoyl-CoA from 2,4-dienoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20930
symbol: KOC87332.1
gene_biotype: protein_coding
description:
  L-idonate 5-dehydrogenase; NAD-binding; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20935
symbol: KOC87333.1
gene_biotype: protein_coding
description:
  Gluconate 5-dehydrogenase; Involved in the nonphosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: NG42_20940
symbol: KOC87334.1
gene_biotype: protein_coding
description:
  Gluconate permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20955
symbol: KOC87337.1
gene_biotype: protein_coding
description:
  Gluconate 5-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20960
symbol: KOC87352.1
gene_biotype: protein_coding
description:
  GlcG protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20965
symbol: KOC87338.1
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20980
symbol: KOC87341.1
gene_biotype: protein_coding
description:
  GlcNAc-PI de-N-acetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_20995
symbol: KOC87344.1
gene_biotype: protein_coding
description:
  2-pyrone-4,6-dicarboxylate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_21015
symbol: KOC87348.1
gene_biotype: protein_coding
description:
  Calcium ABC transporter ATPase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.


ensembl_gene_id: NG42_21020
symbol: KOC87349.1
gene_biotype: protein_coding
description:
  SulP family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_21030
symbol: rsmI
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: NG42_21035
symbol: lpoA
gene_biotype: protein_coding
description:
  Penicillin-binding protein; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1A (PBP1a). Belongs to the LpoA family.


ensembl_gene_id: NG42_21040
symbol: KOC87303.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0102 family.


ensembl_gene_id: NG42_21045
symbol: diaA
gene_biotype: protein_coding
description:
  DnaA initiator-associating protein DiaA; Required for the timely initiation of chromosomal replication via direct interactions with the DnaA initiator protein. Belongs to the SIS family. DiaA subfamily.


ensembl_gene_id: NG42_21055
symbol: KOC87305.1
gene_biotype: protein_coding
description:
  Pirin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pirin family.


ensembl_gene_id: NG42_21075
symbol: KOC87309.1
gene_biotype: protein_coding
description:
  Glutathionyl-hydroquinone reductase YqjG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_21105
symbol: mzrA
gene_biotype: protein_coding
description:
  Modulator protein; Modulates the activity of the EnvZ/OmpR two-component regulatory system, probably by directly modulating EnvZ enzymatic activity and increasing stability of phosphorylated OmpR.


ensembl_gene_id: NG42_21115
symbol: KOC87316.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates the expression of uxuBA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_21120
symbol: uxaC
gene_biotype: protein_coding
description:
  Glucuronate isomerase; Catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_21125
symbol: KOC87318.1
gene_biotype: protein_coding
description:
  Altronate oxidoreductase; Catalyzes the formation of D-tagaturonate from D-altronate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_21130
symbol: KOC87319.1
gene_biotype: protein_coding
description:
  Altronate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_21135
symbol: sstT
gene_biotype: protein_coding
description:
  Serine/threonine protein kinase; Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system). Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: NG42_21165
symbol: KOC87290.1
gene_biotype: protein_coding
description:
  Hemin ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_21170
symbol: KOC87291.1
gene_biotype: protein_coding
description:
  Hemin transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_21180
symbol: KOC87293.1
gene_biotype: protein_coding
description:
  Hemin transporter HemP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_21190
symbol: KOC87295.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate synthase regulatory protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: NG42_21195
symbol: KOC87296.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: NG42_21205
symbol: KOC87298.1
gene_biotype: protein_coding
description:
  YdiK; inner membrane protein; ydiK promoter presents a PurR sequence, suggesting that its expression is purine-regulated; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_21215
symbol: KOC87299.1
gene_biotype: protein_coding
description:
  Thioesterase; Required for efficient enterobactin production; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_21225
symbol: KOC87276.1
gene_biotype: protein_coding
description:
  ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family.


ensembl_gene_id: NG42_21230
symbol: KOC87277.1
gene_biotype: protein_coding
description:
  Hcp family T6SS protein CtsH1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_21260
symbol: KOC87283.1
gene_biotype: protein_coding
description:
  Threonine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_21265
symbol: thrB
gene_biotype: protein_coding
description:
  Serine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: NG42_21270
symbol: thrA
gene_biotype: protein_coding
description:
  Aspartate kinase; Multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_21290
symbol: KOC87264.1
gene_biotype: protein_coding
description:
  Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_21310
symbol: KOC87271.1
gene_biotype: protein_coding
description:
  FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: NG42_21315
symbol: fabG-2
gene_biotype: protein_coding
description:
  3-ketoacyl-ACP reductase; Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_21320
symbol: KOC87268.1
gene_biotype: protein_coding
description:
  3-hydroxy-fatty acyl-ACP dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_21335
symbol: trmJ-2
gene_biotype: protein_coding
description:
  RNA methyltransferase; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: NG42_21340
symbol: KOC87253.1
gene_biotype: protein_coding
description:
  TorR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_21350
symbol: KOC87254.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; AraC family; binds to the right arm of the replication origin oriC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_21355
symbol: gpmB
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; Catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate mutase family. GpmB subfamily.


ensembl_gene_id: NG42_21360
symbol: yjjX
gene_biotype: protein_coding
description:
  Inositol monophosphatase; Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA/RNA precursor pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions.


ensembl_gene_id: NG42_21365
symbol: trpR
gene_biotype: protein_coding
description:
  Trp operon repressor; This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region.


ensembl_gene_id: NG42_21370
symbol: KOC87258.1
gene_biotype: protein_coding
description:
  Lytic murein transglycosylase; Catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_21385
symbol: fecE
gene_biotype: protein_coding
description:
  Iron-dicitrate transporter ATP-binding subunit; Part of the FecBCDE citrate-dependent iron (III) transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_21390
symbol: KOC87248.1
gene_biotype: protein_coding
description:
  Enterochelin esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_21395
symbol: KOC87241.1
gene_biotype: protein_coding
description:
  Ferrichrysobactin receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_21400
symbol: amn
gene_biotype: protein_coding
description:
  AMP nucleosidase; Catalyzes the hydrolysis of the N-glycosidic bond of AMP to form adenine and ribose 5-phosphate. Involved in regulation of AMP concentrations.


ensembl_gene_id: NG42_21410
symbol: KOC87244.1
gene_biotype: protein_coding
description:
  MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_21425
symbol: KOC87247.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_21430
symbol: adhP
gene_biotype: protein_coding
description:
  Ethanol-active dehydrogenase/acetaldehyde-active reductase; Similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_21445
symbol: KOC87237.1
gene_biotype: protein_coding
description:
  VCBS protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_21455
symbol: pntA
gene_biotype: protein_coding
description:
  NAD(P) transhydrogenase subunit alpha; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the AlaDH/PNT family.


ensembl_gene_id: NG42_21510
symbol: KOC86929.1
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; SAM-dependent;catalyzes the methylation of cytosine at position 1962 of the 23S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_21515
symbol: KOC86930.1
gene_biotype: protein_coding
description:
  Acylphosphatase; Catalyzes the hydrolysis of acylphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: NG42_21525
symbol: KOC86932.1
gene_biotype: protein_coding
description:
  Membrane protein; Binds to the HflBKC complex which modulates FtsH activity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BI1 family.


ensembl_gene_id: NG42_21720
symbol: KOC85281.1
gene_biotype: protein_coding
description:
  Rhs-family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


