# geneInfo

ensembl_gene_id: RPIT_00010
symbol: RPIT_00010
gene_biotype: protein_coding
description:
  Phosphoadenosine phosphosulfate reductase; Incomplete; partial on complete genome; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00015
symbol: AQP43405.1
gene_biotype: protein_coding
description:
  Sulfate adenylyltransferase; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.


ensembl_gene_id: RPIT_00020
symbol: AQP43406.1
gene_biotype: protein_coding
description:
  Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00025
symbol: AQP43407.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00030
symbol: AQP43408.1
gene_biotype: protein_coding
description:
  2-oxoglutarate ferredoxin oxidoreductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00035
symbol: AQP43409.1
gene_biotype: protein_coding
description:
  2-oxoacid:ferredoxin oxidoreductase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00040
symbol: AQP43410.1
gene_biotype: protein_coding
description:
  uroporphyrinogen-III C-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00050
symbol: AQP43412.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: RPIT_00055
symbol: AQP43413.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00070
symbol: RPIT_00070
gene_biotype: protein_coding
description:
  methylmalonyl-CoA carboxyltransferase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00075
symbol: AQP43415.1
gene_biotype: protein_coding
description:
  DUF4440 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00080
symbol: AQP43416.1
gene_biotype: protein_coding
description:
  tRNA-specific adenosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00100
symbol: AQP43420.1
gene_biotype: protein_coding
description:
  aminoacyl-tRNA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00105
symbol: AQP43421.1
gene_biotype: protein_coding
description:
  O-acetyl-ADP-ribose deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00125
symbol: RPIT_00125
gene_biotype: protein_coding
description:
  Hypothetical protein; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00130
symbol: AQP43425.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00135
symbol: AQP45932.1
gene_biotype: protein_coding
description:
  MOSC domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00175
symbol: glpK
gene_biotype: protein_coding
description:
  Converts glycerol and ADP to glycerol-3-phosphate and ADP; internal stop; incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00200
symbol: RPIT_00200
gene_biotype: protein_coding
description:
  Amino acid permease; Incomplete; partial on complete genome; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: RPIT_00215
symbol: RPIT_00215
gene_biotype: protein_coding
description:
  Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00220
symbol: AQP43439.1
gene_biotype: protein_coding
description:
  ISL3 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00250
symbol: RPIT_00250
gene_biotype: protein_coding
description:
  Hypothetical protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00275
symbol: RPIT_00275
gene_biotype: protein_coding
description:
  Transposase; Frameshifted; incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00295
symbol: RPIT_00295
gene_biotype: protein_coding
description:
  Hypothetical protein; Incomplete; partial on complete genome; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00310
symbol: RPIT_00310
gene_biotype: protein_coding
description:
  IS1380 family transposase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00315
symbol: AQP43451.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid transporter AzlD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00320
symbol: AQP45935.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00330
symbol: AQP43452.1
gene_biotype: protein_coding
description:
  DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00335
symbol: AQP45937.1
gene_biotype: protein_coding
description:
  Low molecular weight phosphatase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: RPIT_00340
symbol: AQP43453.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: RPIT_00350
symbol: AQP45938.1
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00355
symbol: AQP43455.1
gene_biotype: protein_coding
description:
  Alpha-ketoacid dehydrogenase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00360
symbol: AQP43456.1
gene_biotype: protein_coding
description:
  Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00370
symbol: AQP43458.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: RPIT_00380
symbol: aat
gene_biotype: protein_coding
description:
  leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: RPIT_00385
symbol: AQP43461.1
gene_biotype: protein_coding
description:
  Endonuclease VIII; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPG family.


ensembl_gene_id: RPIT_00400
symbol: AQP43463.1
gene_biotype: protein_coding
description:
  Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00410
symbol: AQP43465.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WXG100 family.


ensembl_gene_id: RPIT_00415
symbol: pheA
gene_biotype: protein_coding
description:
  Prephenate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00425
symbol: AQP43468.1
gene_biotype: protein_coding
description:
  Arabinose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00430
symbol: serS
gene_biotype: protein_coding
description:
  serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: RPIT_00435
symbol: AQP43470.1
gene_biotype: protein_coding
description:
  HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00440
symbol: AQP43471.1
gene_biotype: protein_coding
description:
  Peptidase C56; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00445
symbol: AQP43472.1
gene_biotype: protein_coding
description:
  Trehalose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00450
symbol: AQP43473.1
gene_biotype: protein_coding
description:
  LLM class F420-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00460
symbol: AQP43475.1
gene_biotype: protein_coding
description:
  Type 1 glutamine amidotransferase domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00465
symbol: argG
gene_biotype: protein_coding
description:
  Argininosuccinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the argininosuccinate synthase family. Type 2 subfamily.


ensembl_gene_id: RPIT_00495
symbol: AQP43482.1
gene_biotype: protein_coding
description:
  UDP-glucose 6-dehydrogenase; Catalyzes the formation of UDP-glucuronate from UDP-glucose; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00505
symbol: AQP43484.1
gene_biotype: protein_coding
description:
  VOC family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00520
symbol: AQP43487.1
gene_biotype: protein_coding
description:
  Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00530
symbol: AQP45940.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00540
symbol: AQP43490.1
gene_biotype: protein_coding
description:
  IS110 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00545
symbol: AQP43491.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing); Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: RPIT_00550
symbol: AQP43492.1
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-mannosamine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: RPIT_00575
symbol: RPIT_00575
gene_biotype: protein_coding
description:
  LLM class F420-dependent oxidoreductase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00580
symbol: AQP43497.1
gene_biotype: protein_coding
description:
  N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00585
symbol: AQP43498.1
gene_biotype: protein_coding
description:
  Aminotransferase DegT; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: RPIT_00590
symbol: AQP45941.1
gene_biotype: protein_coding
description:
  Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00595
symbol: kbl
gene_biotype: protein_coding
description:
  Glycine C-acetyltransferase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.


ensembl_gene_id: RPIT_00600
symbol: tdh
gene_biotype: protein_coding
description:
  L-threonine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family.


ensembl_gene_id: RPIT_00605
symbol: AQP43500.1
gene_biotype: protein_coding
description:
  Nucleotide sugar dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: RPIT_00615
symbol: AQP43502.1
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00620
symbol: pgi
gene_biotype: protein_coding
description:
  Glucose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GPI family.


ensembl_gene_id: RPIT_00635
symbol: AQP43506.1
gene_biotype: protein_coding
description:
  Potassium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00650
symbol: argS
gene_biotype: protein_coding
description:
  arginine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00655
symbol: AQP43510.1
gene_biotype: protein_coding
description:
  Polyphosphate glucokinase; Catalyzes the phosphorylation of glucose using polyphosphate or ATP as the phosphoryl donor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00675
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.


ensembl_gene_id: RPIT_00695
symbol: AQP43517.1
gene_biotype: protein_coding
description:
  DUF368 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00705
symbol: AQP43519.1
gene_biotype: protein_coding
description:
  GNAT family N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00715
symbol: AQP43521.1
gene_biotype: protein_coding
description:
  ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nlpA lipoprotein family.


ensembl_gene_id: RPIT_00720
symbol: AQP43522.1
gene_biotype: protein_coding
description:
  Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00725
symbol: metN
gene_biotype: protein_coding
description:
  Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: RPIT_00750
symbol: AQP43528.1
gene_biotype: protein_coding
description:
  Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00755
symbol: AQP43529.1
gene_biotype: protein_coding
description:
  propionyl-CoA--succinate CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00760
symbol: AQP43530.1
gene_biotype: protein_coding
description:
  Histidine phosphatase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00765
symbol: AQP45943.1
gene_biotype: protein_coding
description:
  Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00780
symbol: RPIT_00780
gene_biotype: protein_coding
description:
  Hypothetical protein; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methyltransferase superfamily.


ensembl_gene_id: RPIT_00790
symbol: AQP43533.1
gene_biotype: protein_coding
description:
  Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00815
symbol: AQP43538.1
gene_biotype: protein_coding
description:
  Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome P450 family.


ensembl_gene_id: RPIT_00825
symbol: AQP43540.1
gene_biotype: protein_coding
description:
  Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00845
symbol: AQP43544.1
gene_biotype: protein_coding
description:
  Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00850
symbol: AQP43545.1
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00905
symbol: AQP43556.1
gene_biotype: protein_coding
description:
  Sugar phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00920
symbol: RPIT_00920
gene_biotype: protein_coding
description:
  Glycosyltransferase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00935
symbol: AQP43561.1
gene_biotype: protein_coding
description:
  TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00945
symbol: RPIT_00945
gene_biotype: protein_coding
description:
  NAD(P)-dependent alcohol dehydrogenase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_00975
symbol: AQP43568.1
gene_biotype: protein_coding
description:
  Aspartate/tyrosine/aromatic aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01010
symbol: AQP43574.1
gene_biotype: protein_coding
description:
  PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01020
symbol: RPIT_01020
gene_biotype: protein_coding
description:
  Sulfatase modifying factor 1 (C-alpha-formyglycine- generating enzyme 1); Frameshifted; incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01025
symbol: AQP43576.1
gene_biotype: protein_coding
description:
  HNH endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01050
symbol: AQP43580.1
gene_biotype: protein_coding
description:
  Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01060
symbol: AQP43582.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01065
symbol: AQP43583.1
gene_biotype: protein_coding
description:
  ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01105
symbol: AQP43590.1
gene_biotype: protein_coding
description:
  HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HAD-like hydrolase superfamily.


ensembl_gene_id: RPIT_01110
symbol: AQP43591.1
gene_biotype: protein_coding
description:
  Sn-glycerol-3-phosphate dehydrogenase subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01115
symbol: AQP43592.1
gene_biotype: protein_coding
description:
  Anaerobic glycerol-3-phosphate dehydrogenase subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01120
symbol: AQP43593.1
gene_biotype: protein_coding
description:
  Sn-glycerol-3-phosphate dehydrogenase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01125
symbol: AQP43594.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.


ensembl_gene_id: RPIT_01180
symbol: RPIT_01180
gene_biotype: protein_coding
description:
  Glutamate receptor; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01200
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: RPIT_01205
symbol: AQP43605.1
gene_biotype: protein_coding
description:
  Nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: RPIT_01210
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: RPIT_01225
symbol: pdxS
gene_biotype: protein_coding
description:
  Pyridoxal biosynthesis lyase PdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.


ensembl_gene_id: RPIT_01230
symbol: pdxT
gene_biotype: protein_coding
description:
  Glutamine amidotransferase subunit PdxT; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.


ensembl_gene_id: RPIT_01235
symbol: AQP43609.1
gene_biotype: protein_coding
description:
  ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01250
symbol: RPIT_01250
gene_biotype: protein_coding
description:
  ABC transporter; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01260
symbol: AQP43613.1
gene_biotype: protein_coding
description:
  Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01270
symbol: AQP43615.1
gene_biotype: protein_coding
description:
  HPr family phosphocarrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01290
symbol: AQP43619.1
gene_biotype: protein_coding
description:
  Thymidine phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01295
symbol: AQP43620.1
gene_biotype: protein_coding
description:
  LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01300
symbol: AQP43621.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01305
symbol: AQP45951.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: RPIT_01315
symbol: RPIT_01315
gene_biotype: protein_coding
description:
  Sugar ABC transporter permease YjfF; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01330
symbol: pckG
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family.


ensembl_gene_id: RPIT_01355
symbol: AQP43628.1
gene_biotype: protein_coding
description:
  Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01360
symbol: AQP43629.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01365
symbol: whiB
gene_biotype: protein_coding
description:
  WhiB family transcriptional regulator; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.


ensembl_gene_id: RPIT_01380
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: RPIT_01385
symbol: AQP43632.1
gene_biotype: protein_coding
description:
  LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01405
symbol: AQP43636.1
gene_biotype: protein_coding
description:
  Pilus assembly protein CpaF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01420
symbol: AQP43639.1
gene_biotype: protein_coding
description:
  Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01440
symbol: AQP43642.1
gene_biotype: protein_coding
description:
  Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01445
symbol: AQP43643.1
gene_biotype: protein_coding
description:
  Transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methyltransferase superfamily.


ensembl_gene_id: RPIT_01450
symbol: AQP45956.1
gene_biotype: protein_coding
description:
  AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01455
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: RPIT_01465
symbol: tmk
gene_biotype: protein_coding
description:
  dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: RPIT_01475
symbol: AQP43647.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01500
symbol: AQP43650.1
gene_biotype: protein_coding
description:
  Amine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01510
symbol: AQP43652.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01515
symbol: AQP43653.1
gene_biotype: protein_coding
description:
  Ammonia channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01525
symbol: AQP43655.1
gene_biotype: protein_coding
description:
  SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01530
symbol: AQP43656.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity.


ensembl_gene_id: RPIT_01535
symbol: crcB
gene_biotype: protein_coding
description:
  Hypothetical protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: RPIT_01540
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: RPIT_01545
symbol: AQP43658.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01555
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA lysidine(34) synthetase TilS; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: RPIT_01560
symbol: AQP43661.1
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: RPIT_01565
symbol: ftsH
gene_biotype: protein_coding
description:
  Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: RPIT_01570
symbol: folE
gene_biotype: protein_coding
description:
  GTP cyclohydrolase I FolE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01575
symbol: AQP45960.1
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01580
symbol: AQP45963.1
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: RPIT_01585
symbol: AQP43662.1
gene_biotype: protein_coding
description:
  2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01595
symbol: AQP45964.1
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: RPIT_01615
symbol: AQP43667.1
gene_biotype: protein_coding
description:
  NDP-hexose 4-ketoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family.


ensembl_gene_id: RPIT_01620
symbol: AQP43668.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: RPIT_01630
symbol: AQP43670.1
gene_biotype: protein_coding
description:
  Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01635
symbol: AQP43671.1
gene_biotype: protein_coding
description:
  Thiamine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01645
symbol: RPIT_01645
gene_biotype: protein_coding
description:
  DNA integrity scanning protein DisA; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01655
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: RPIT_01660
symbol: AQP43675.1
gene_biotype: protein_coding
description:
  Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01670
symbol: RPIT_01670
gene_biotype: protein_coding
description:
  AP endonuclease; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01675
symbol: AQP43677.1
gene_biotype: protein_coding
description:
  CAAX protease family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01680
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: RPIT_01685
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: RPIT_01715
symbol: AQP45965.1
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein ResC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01720
symbol: AQP43684.1
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01725
symbol: AQP43685.1
gene_biotype: protein_coding
description:
  C-type cytochrome biogenesis protein CcsB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01735
symbol: AQP43687.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: RPIT_01740
symbol: AQP43688.1
gene_biotype: protein_coding
description:
  Mycothione reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01750
symbol: AQP43690.1
gene_biotype: protein_coding
description:
  NAD(P)-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01755
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: RPIT_01760
symbol: AQP43692.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, permease protein PstA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01765
symbol: AQP43693.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter permease subunit PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: RPIT_01770
symbol: AQP43694.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter substrate-binding protein PstS; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.


ensembl_gene_id: RPIT_01780
symbol: ppk
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: RPIT_01785
symbol: mshD
gene_biotype: protein_coding
description:
  Mycothiol synthase; Catalyzes the transfer of acetyl from acetyl-CoA to desacetylmycothiol (Cys-GlcN-Ins) to form mycothiol.


ensembl_gene_id: RPIT_01800
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: RPIT_01810
symbol: AQP43699.1
gene_biotype: protein_coding
description:
  Folate-binding protein YgfZ; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.


ensembl_gene_id: RPIT_01815
symbol: tpx
gene_biotype: protein_coding
description:
  Lipid hydroperoxide peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.


ensembl_gene_id: RPIT_01820
symbol: AQP43701.1
gene_biotype: protein_coding
description:
  Polyphosphate kinase 2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01840
symbol: AQP43704.1
gene_biotype: protein_coding
description:
  Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01845
symbol: AQP43705.1
gene_biotype: protein_coding
description:
  GTP-binding protein TypA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01865
symbol: AQP45971.1
gene_biotype: protein_coding
description:
  Dihydroxyacetone kinase subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01870
symbol: AQP43708.1
gene_biotype: protein_coding
description:
  Dihydroxyacetone kinase subunit DhaK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01875
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: RPIT_01890
symbol: AQP43712.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01905
symbol: purD
gene_biotype: protein_coding
description:
  Phosphoribosylamine--glycine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GARS family.


ensembl_gene_id: RPIT_01925
symbol: AQP43719.1
gene_biotype: protein_coding
description:
  acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: RPIT_01930
symbol: AQP43720.1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01945
symbol: AQP43722.1
gene_biotype: protein_coding
description:
  Adenylosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: RPIT_01950
symbol: AQP43723.1
gene_biotype: protein_coding
description:
  Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_01975
symbol: purC
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazolesuccinocarboxamide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SAICAR synthetase family.


ensembl_gene_id: RPIT_01985
symbol: AQP45973.1
gene_biotype: protein_coding
description:
  3-methyladenine DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA glycosylase MPG family.


ensembl_gene_id: RPIT_01990
symbol: purS
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase subunit PurS; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought  [...]


ensembl_gene_id: RPIT_01995
symbol: purQ
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]


ensembl_gene_id: RPIT_02010
symbol: AQP43734.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S8 family.


ensembl_gene_id: RPIT_02015
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase II; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist  [...]


ensembl_gene_id: RPIT_02035
symbol: AQP43739.1
gene_biotype: protein_coding
description:
  Dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02050
symbol: aspA
gene_biotype: protein_coding
description:
  Aspartate ammonia-lyase; Catalyzes the formation of fumarate from aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02055
symbol: AQP43743.1
gene_biotype: protein_coding
description:
  2-nitropropane dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02065
symbol: AQP43745.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate--protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: RPIT_02085
symbol: AQP43748.1
gene_biotype: protein_coding
description:
  Maltose ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02090
symbol: AQP43749.1
gene_biotype: protein_coding
description:
  Maltose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02115
symbol: moaA
gene_biotype: protein_coding
description:
  Cyclic pyranopterin phosphate synthase; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: RPIT_02130
symbol: AQP43757.1
gene_biotype: protein_coding
description:
  Nitrate reductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: RPIT_02135
symbol: AQP43758.1
gene_biotype: protein_coding
description:
  Nitrate reductase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02140
symbol: AQP43759.1
gene_biotype: protein_coding
description:
  Nitrate reductase molybdenum cofactor assembly chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02145
symbol: AQP43760.1
gene_biotype: protein_coding
description:
  Respiratory nitrate reductase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02150
symbol: AQP43761.1
gene_biotype: protein_coding
description:
  Nitrate transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02155
symbol: AQP43762.1
gene_biotype: protein_coding
description:
  MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02160
symbol: AQP43763.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoaE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02170
symbol: AQP43765.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: RPIT_02200
symbol: AQP43770.1
gene_biotype: protein_coding
description:
  ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02285
symbol: AQP43787.1
gene_biotype: protein_coding
description:
  IS5 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02300
symbol: AQP43790.1
gene_biotype: protein_coding
description:
  Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02340
symbol: AQP43798.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02345
symbol: AQP43799.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02380
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: RPIT_02385
symbol: purM
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine cyclo-ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02410
symbol: AQP43812.1
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase (NADP(+)); Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the monomeric-type IDH family.


ensembl_gene_id: RPIT_02425
symbol: AQP43814.1
gene_biotype: protein_coding
description:
  Cytochrome c nitrite reductase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02430
symbol: AQP43815.1
gene_biotype: protein_coding
description:
  Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cytochrome c-552 family.


ensembl_gene_id: RPIT_02475
symbol: AQP43821.1
gene_biotype: protein_coding
description:
  Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02520
symbol: AQP43829.1
gene_biotype: protein_coding
description:
  Glucohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02540
symbol: glyQ
gene_biotype: protein_coding
description:
  glycine--tRNA ligase subunit alpha/beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02545
symbol: AQP43833.1
gene_biotype: protein_coding
description:
  Cation-efflux pump; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: RPIT_02550
symbol: AQP43834.1
gene_biotype: protein_coding
description:
  Galactokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GHMP kinase family.


ensembl_gene_id: RPIT_02555
symbol: AQP43835.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02575
symbol: menA
gene_biotype: protein_coding
description:
  Hypothetical protein; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.


ensembl_gene_id: RPIT_02580
symbol: menC
gene_biotype: protein_coding
description:
  O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).


ensembl_gene_id: RPIT_02585
symbol: menD
gene_biotype: protein_coding
description:
  2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily.


ensembl_gene_id: RPIT_02595
symbol: menG
gene_biotype: protein_coding
description:
  Bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).


ensembl_gene_id: RPIT_02620
symbol: AQP43846.1
gene_biotype: protein_coding
description:
  Isochorismate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02625
symbol: AQP45979.1
gene_biotype: protein_coding
description:
  Drug:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02630
symbol: AQP43847.1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain.


ensembl_gene_id: RPIT_02635
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: RPIT_02640
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: RPIT_02645
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: RPIT_02650
symbol: AQP43850.1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02655
symbol: AQP43851.1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.


ensembl_gene_id: RPIT_02660
symbol: AQP43852.1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.


ensembl_gene_id: RPIT_02665
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: RPIT_02670
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: RPIT_02675
symbol: AQP43855.1
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: RPIT_02680
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: RPIT_02685
symbol: AQP45981.1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02690
symbol: AQP43857.1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02695
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: RPIT_02700
symbol: AQP45982.1
gene_biotype: protein_coding
description:
  Geranylgeranyl pyrophosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: RPIT_02705
symbol: AQP43859.1
gene_biotype: protein_coding
description:
  Peptidase M13; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02710
symbol: AQP43860.1
gene_biotype: protein_coding
description:
  Ribonuclease BN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02750
symbol: AQP43867.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02770
symbol: AQP43870.1
gene_biotype: protein_coding
description:
  YajQ family cyclic di-GMP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0234 family.


ensembl_gene_id: RPIT_02785
symbol: AQP43872.1
gene_biotype: protein_coding
description:
  Purine-nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02800
symbol: rpmG
gene_biotype: protein_coding
description:
  50S ribosomal protein L33; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL33 family.


ensembl_gene_id: RPIT_02810
symbol: AQP43875.1
gene_biotype: protein_coding
description:
  Dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02855
symbol: nusG
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: RPIT_02860
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: RPIT_02865
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: RPIT_02870
symbol: AQP43885.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Removes 5-oxoproline from various penultimate amino acid residues except L-proline.


ensembl_gene_id: RPIT_02875
symbol: AQP43886.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: RPIT_02880
symbol: AQP43887.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate mutase family.


ensembl_gene_id: RPIT_02885
symbol: nnrD
gene_biotype: protein_coding
description:
  NAD(P)H-hydrate dehydratase; Catalyzes the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. Together with NAD(P)HX epimerase, which catalyzes the epimerization of the S-and R-forms, the enzyme allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.


ensembl_gene_id: RPIT_02890
symbol: AQP45985.1
gene_biotype: protein_coding
description:
  Ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02900
symbol: AQP43890.1
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02905
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: RPIT_02910
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: RPIT_02915
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: RPIT_02925
symbol: AQP43895.1
gene_biotype: protein_coding
description:
  ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: RPIT_02950
symbol: rpsL
gene_biotype: protein_coding
description:
  30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: RPIT_02955
symbol: rpsG
gene_biotype: protein_coding
description:
  30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: RPIT_02960
symbol: fusA
gene_biotype: protein_coding
description:
  Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]


ensembl_gene_id: RPIT_02965
symbol: AQP43902.1
gene_biotype: protein_coding
description:
  Formate C-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_02970
symbol: AQP45987.1
gene_biotype: protein_coding
description:
  Pyruvate formate-lyase 1-activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.


ensembl_gene_id: RPIT_02975
symbol: vapC
gene_biotype: protein_coding
description:
  VapC toxin family PIN domain ribonuclease; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.


ensembl_gene_id: RPIT_02985
symbol: tuf
gene_biotype: protein_coding
description:
  Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: RPIT_02990
symbol: AQP43906.1
gene_biotype: protein_coding
description:
  glutamine--tRNA ligase; Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03000
symbol: gltX
gene_biotype: protein_coding
description:
  glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: RPIT_03005
symbol: AQP43908.1
gene_biotype: protein_coding
description:
  Glutathione-dependent reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03035
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: RPIT_03040
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: RPIT_03050
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: RPIT_03055
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: RPIT_03060
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: RPIT_03065
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: RPIT_03070
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: RPIT_03075
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: RPIT_03080
symbol: rpmC
gene_biotype: protein_coding
description:
  50S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL29 family.


ensembl_gene_id: RPIT_03085
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: RPIT_03105
symbol: AQP43927.1
gene_biotype: protein_coding
description:
  MBL fold metallo-hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03115
symbol: AQP43929.1
gene_biotype: protein_coding
description:
  2,3-diaminopropionate biosynthesis protein SbnA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03125
symbol: AQP43931.1
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03130
symbol: AQP43932.1
gene_biotype: protein_coding
description:
  NAD-dependent epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03135
symbol: AQP43933.1
gene_biotype: protein_coding
description:
  RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03140
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: RPIT_03145
symbol: rplX
gene_biotype: protein_coding
description:
  50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: RPIT_03150
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: RPIT_03155
symbol: rpsN
gene_biotype: protein_coding
description:
  30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: RPIT_03160
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: RPIT_03165
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: RPIT_03170
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: RPIT_03175
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: RPIT_03180
symbol: rpmD
gene_biotype: protein_coding
description:
  50S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03185
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: RPIT_03190
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: RPIT_03200
symbol: map
gene_biotype: protein_coding
description:
  Adenylate kinase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: RPIT_03225
symbol: RPIT_03225
gene_biotype: protein_coding
description:
  Inositol 2-dehydrogenase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03230
symbol: AQP45991.1
gene_biotype: protein_coding
description:
  5-deoxy-glucuronate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03235
symbol: AQP43948.1
gene_biotype: protein_coding
description:
  3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing); Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.


ensembl_gene_id: RPIT_03245
symbol: AQP43950.1
gene_biotype: protein_coding
description:
  Sugar kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03265
symbol: AQP43954.1
gene_biotype: protein_coding
description:
  DeoR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03270
symbol: AQP43955.1
gene_biotype: protein_coding
description:
  6-phospho-beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03280
symbol: AQP43957.1
gene_biotype: protein_coding
description:
  Glutathione-dependent formaldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03285
symbol: AQP43958.1
gene_biotype: protein_coding
description:
  Methylmalonate-semialdehyde dehydrogenase (CoA acylating); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03295
symbol: rbsA
gene_biotype: protein_coding
description:
  D-xylose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.


ensembl_gene_id: RPIT_03305
symbol: AQP43961.1
gene_biotype: protein_coding
description:
  Protein iolH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03310
symbol: iolG
gene_biotype: protein_coding
description:
  Inositol 2-dehydrogenase; Involved in the oxidation of myo-inositol (MI) to 2-keto-myo- inositol (2KMI or 2-inosose).


ensembl_gene_id: RPIT_03315
symbol: AQP43963.1
gene_biotype: protein_coding
description:
  2-keto-myo-inositol dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03320
symbol: AQP43964.1
gene_biotype: protein_coding
description:
  Myo-inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03330
symbol: AQP43966.1
gene_biotype: protein_coding
description:
  Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03335
symbol: AQP43967.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: RPIT_03345
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: RPIT_03350
symbol: rpmJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L36; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL36 family.


ensembl_gene_id: RPIT_03355
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: RPIT_03360
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: RPIT_03370
symbol: rpoA
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: RPIT_03375
symbol: rplQ
gene_biotype: protein_coding
description:
  50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03400
symbol: AQP43979.1
gene_biotype: protein_coding
description:
  Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03415
symbol: AQP43981.1
gene_biotype: protein_coding
description:
  Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: RPIT_03425
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine(38-40) synthase TruA; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: RPIT_03430
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanosine(46)-N7)-methyltransferase TrmB; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: RPIT_03440
symbol: AQP45994.1
gene_biotype: protein_coding
description:
  Elongation factor G; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03445
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: RPIT_03450
symbol: rpsI
gene_biotype: protein_coding
description:
  30S ribosomal protein S9; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS9 family.


ensembl_gene_id: RPIT_03455
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: RPIT_03485
symbol: AQP43991.1
gene_biotype: protein_coding
description:
  Transglutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03490
symbol: map-2
gene_biotype: protein_coding
description:
  Type I methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: RPIT_03500
symbol: AQP43994.1
gene_biotype: protein_coding
description:
  Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family.


ensembl_gene_id: RPIT_03510
symbol: AQP43996.1
gene_biotype: protein_coding
description:
  Bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of [...]


ensembl_gene_id: RPIT_03535
symbol: RPIT_03535
gene_biotype: protein_coding
description:
  Oxidoreductase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03540
symbol: AQP44000.1
gene_biotype: protein_coding
description:
  Type I glutamate--ammonia ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03545
symbol: AQP44001.1
gene_biotype: protein_coding
description:
  Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: RPIT_03550
symbol: AQP44002.1
gene_biotype: protein_coding
description:
  RDD family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03555
symbol: AQP44003.1
gene_biotype: protein_coding
description:
  Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03570
symbol: lipB
gene_biotype: protein_coding
description:
  Lipoyl synthase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: RPIT_03580
symbol: AQP44006.1
gene_biotype: protein_coding
description:
  Dihydrolipoamide acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03585
symbol: AQP44007.1
gene_biotype: protein_coding
description:
  Dihydrolipoyl dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03595
symbol: pepA
gene_biotype: protein_coding
description:
  Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: RPIT_03615
symbol: AQP44013.1
gene_biotype: protein_coding
description:
  Phage shock protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03630
symbol: AQP44016.1
gene_biotype: protein_coding
description:
  Iron-sulfur cluster insertion protein ErpA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HesB/IscA family.


ensembl_gene_id: RPIT_03635
symbol: AQP44017.1
gene_biotype: protein_coding
description:
  Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).


ensembl_gene_id: RPIT_03640
symbol: AQP45998.1
gene_biotype: protein_coding
description:
  Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.


ensembl_gene_id: RPIT_03645
symbol: AQP44018.1
gene_biotype: protein_coding
description:
  Cytochrome C oxidase subunit IV; Part of cytochrome c oxidase, its function is unknown. Belongs to the cytochrome c oxidase bacterial subunit CtaF family.


ensembl_gene_id: RPIT_03655
symbol: RPIT_03655
gene_biotype: protein_coding
description:
  Transposase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03695
symbol: AQP44027.1
gene_biotype: protein_coding
description:
  Pirin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pirin family.


ensembl_gene_id: RPIT_03700
symbol: AQP44028.1
gene_biotype: protein_coding
description:
  Inosine 5-monophosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03705
symbol: AQP44029.1
gene_biotype: protein_coding
description:
  Ubiquinol-cytochrome c reductase cytochrome b subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03710
symbol: AQP44030.1
gene_biotype: protein_coding
description:
  Ubiquinol-cytochrome C reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03715
symbol: AQP44031.1
gene_biotype: protein_coding
description:
  Cystathionine beta-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03725
symbol: AQP44032.1
gene_biotype: protein_coding
description:
  Cytochrome C oxidase assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03730
symbol: AQP44033.1
gene_biotype: protein_coding
description:
  Response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03735
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: RPIT_03760
symbol: AQP44039.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: RPIT_03765
symbol: AQP44040.1
gene_biotype: protein_coding
description:
  Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03780
symbol: AQP44043.1
gene_biotype: protein_coding
description:
  1-acyl-sn-glycerol-3-phosphate acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03795
symbol: AQP44046.1
gene_biotype: protein_coding
description:
  3-deoxy-7-phosphoheptulonate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II DAHP synthase family.


ensembl_gene_id: RPIT_03805
symbol: RPIT_03805
gene_biotype: protein_coding
description:
  Low specificity L-threonine aldolase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03820
symbol: AQP44050.1
gene_biotype: protein_coding
description:
  Magnesium-transporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03825
symbol: AQP46000.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: RPIT_03830
symbol: AQP44051.1
gene_biotype: protein_coding
description:
  5,10-methylenetetrahydrofolate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: RPIT_03870
symbol: AQP44058.1
gene_biotype: protein_coding
description:
  Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03895
symbol: AQP44063.1
gene_biotype: protein_coding
description:
  UDP-glucose 6-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03910
symbol: AQP44066.1
gene_biotype: protein_coding
description:
  Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03920
symbol: AQP44068.1
gene_biotype: protein_coding
description:
  Colanic acid biosynthesis glycosyltransferase WcaL; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03925
symbol: AQP44069.1
gene_biotype: protein_coding
description:
  Glycosyl transferase family 28; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03940
symbol: RPIT_03940
gene_biotype: protein_coding
description:
  Hypothetical protein; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_03950
symbol: AQP46002.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA polymerase type-C family. DnaE2 subfamily.


ensembl_gene_id: RPIT_03955
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: RPIT_03985
symbol: mraZ
gene_biotype: protein_coding
description:
  Cell division/cell wall cluster transcriptional repressor MraZ; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MraZ family.


ensembl_gene_id: RPIT_03990
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA (cytosine(1402)-N(4))-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: RPIT_04000
symbol: AQP46005.1
gene_biotype: protein_coding
description:
  Cell division protein FtsI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_04005
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: RPIT_04010
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramyl peptide synthase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: RPIT_04015
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: RPIT_04020
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: RPIT_04025
symbol: AQP46007.1
gene_biotype: protein_coding
description:
  Putative lipid II flippase FtsW; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.


ensembl_gene_id: RPIT_04030
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: RPIT_04045
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: RPIT_04050
symbol: sepF
gene_biotype: protein_coding
description:
  Cell division protein SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: RPIT_04065
symbol: AQP44089.1
gene_biotype: protein_coding
description:
  DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_04070
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: RPIT_04075
symbol: AQP44091.1
gene_biotype: protein_coding
description:
  RNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: RPIT_04080
symbol: AQP44092.1
gene_biotype: protein_coding
description:
  Pyruvate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pyruvate kinase family.


ensembl_gene_id: RPIT_04100
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: RPIT_04120
symbol: AQP44098.1
gene_biotype: protein_coding
description:
  30S ribosomal protein S1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_04125
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: RPIT_04130
symbol: gcvP
gene_biotype: protein_coding
description:
  Glycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.


ensembl_gene_id: RPIT_04135
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: RPIT_04140
symbol: gcvT
gene_biotype: protein_coding
description:
  Glycine cleavage system protein T; Catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_04155
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: RPIT_04165
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: RPIT_04175
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: RPIT_04185
symbol: AQP44110.1
gene_biotype: protein_coding
description:
  Cobalt ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_04200
symbol: AQP44113.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.


ensembl_gene_id: RPIT_04210
symbol: AQP46011.1
gene_biotype: protein_coding
description:
  Type I glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: RPIT_04215
symbol: pgk
gene_biotype: protein_coding
description:
  Phosphoglycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate kinase family.


ensembl_gene_id: RPIT_04220
symbol: tpiA
gene_biotype: protein_coding
description:
  Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: RPIT_04230
symbol: AQP44118.1
gene_biotype: protein_coding
description:
  Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_04235
symbol: AQP44119.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_04245
symbol: RPIT_04245
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_04250
symbol: AQP44121.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: RPIT_04255
symbol: rbpA
gene_biotype: protein_coding
description:
  Electron transporter; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.


ensembl_gene_id: RPIT_04265
symbol: AQP44124.1
gene_biotype: protein_coding
description:
  OpcA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_04270
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: RPIT_04295
symbol: AQP44128.1
gene_biotype: protein_coding
description:
  Nitric-oxide reductase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_04300
symbol: ctaB
gene_biotype: protein_coding
description:
  Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.


ensembl_gene_id: RPIT_04305
symbol: AQP44130.1
gene_biotype: protein_coding
description:
  DUF4921 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_04340
symbol: AQP44137.1
gene_biotype: protein_coding
description:
  Fe-S cluster assembly protein SufB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_04345
symbol: AQP44138.1
gene_biotype: protein_coding
description:
  Fe-S cluster assembly protein SufD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_04355
symbol: AQP44140.1
gene_biotype: protein_coding
description:
  Fe-S cluster assembly ATPase SufC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_04360
symbol: AQP44141.1
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: RPIT_04365
symbol: AQP44142.1
gene_biotype: protein_coding
description:
  SUF system NifU family Fe-S cluster assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_04370
symbol: AQP44143.1
gene_biotype: protein_coding
description:
  Metal-sulfur cluster biosynthetic enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_04400
symbol: AQP44148.1
gene_biotype: protein_coding
description:
  Phosphonomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_04410
symbol: AQP44150.1
gene_biotype: protein_coding
description:
  Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_04430
symbol: AQP44153.1
gene_biotype: protein_coding
description:
  beta-ketoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_04435
symbol: AQP44154.1
gene_biotype: protein_coding
description:
  Enoyl-[acyl-carrier-protein] reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_04440
symbol: AQP44155.1
gene_biotype: protein_coding
description:
  Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_04445
symbol: AQP46016.1
gene_biotype: protein_coding
description:
  Nodulation efficiency protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_04450
symbol: AQP44156.1
gene_biotype: protein_coding
description:
  Paraslipin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_04480
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: RPIT_04485
symbol: xerC
gene_biotype: protein_coding
description:
  Recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: RPIT_04495
symbol: rpsB
gene_biotype: protein_coding
description:
  30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family.


ensembl_gene_id: RPIT_04500
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: RPIT_04510
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: RPIT_04515
symbol: AQP44167.1
gene_biotype: protein_coding
description:
  Phosphatidate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDS family.


ensembl_gene_id: RPIT_04520
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: RPIT_04525
symbol: AQP44169.1
gene_biotype: protein_coding
description:
  Glutamate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: RPIT_04535
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: RPIT_04540
symbol: AQP46018.1
gene_biotype: protein_coding
description:
  Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_04545
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: RPIT_04555
symbol: proS
gene_biotype: protein_coding
description:
  proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacy [...]


ensembl_gene_id: RPIT_04570
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: RPIT_04575
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription termination/antitermination protein NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: RPIT_04600
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: RPIT_04605
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: RPIT_04610
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine(55) synthase TruB; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: RPIT_04615
symbol: AQP44186.1
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibF; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribF family.


ensembl_gene_id: RPIT_04630
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: RPIT_04635
symbol: AQP44190.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: RPIT_04640
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: RPIT_04645
symbol: dapB
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: RPIT_04650
symbol: AQP44192.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BCCT transporter (TC 2.A.15) family.


ensembl_gene_id: RPIT_04660
symbol: rnj
gene_biotype: protein_coding
description:
  RNase J family beta-CASP ribonuclease; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: RPIT_04665
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: RPIT_04670
symbol: rpmA
gene_biotype: protein_coding
description:
  50S ribosomal protein L27; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL27 family.


ensembl_gene_id: RPIT_04675
symbol: obg
gene_biotype: protein_coding
description:
  GTPase ObgE; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: RPIT_04680
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: RPIT_04690
symbol: proA
gene_biotype: protein_coding
description:
  Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: RPIT_04695
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinic acid mononucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: RPIT_04700
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosome silencing factor; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: RPIT_04715
symbol: hemA
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: RPIT_04720
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: RPIT_04730
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: RPIT_04735
symbol: AQP44208.1
gene_biotype: protein_coding
description:
  Delta-aminolevulinic acid dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ALAD family.


ensembl_gene_id: RPIT_04740
symbol: hemL
gene_biotype: protein_coding
description:
  Glutamate-1-semialdehyde-2,1-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_04745
symbol: AQP44209.1
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps.


ensembl_gene_id: RPIT_04755
symbol: AQP44210.1
gene_biotype: protein_coding
description:
  Deoxyribodipyrimidine photolyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA photolyase family.


ensembl_gene_id: RPIT_04780
symbol: AQP44215.1
gene_biotype: protein_coding
description:
  Anion permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_04800
symbol: RPIT_04800
gene_biotype: protein_coding
description:
  Murein L,D-transpeptidase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_04825
symbol: leuS
gene_biotype: protein_coding
description:
  leucine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: RPIT_04855
symbol: AQP46025.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_04865
symbol: lepA
gene_biotype: protein_coding
description:
  Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: RPIT_04870
symbol: AQP44227.1
gene_biotype: protein_coding
description:
  ATP-dependent helicase HrpB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_04875
symbol: AQP44228.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 31 family.


ensembl_gene_id: RPIT_04880
symbol: AQP44229.1
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: RPIT_04890
symbol: AQP44231.1
gene_biotype: protein_coding
description:
  GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_04930
symbol: RPIT_04930
gene_biotype: protein_coding
description:
  mRNA interferase MazF3; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_04935
symbol: AQP44238.1
gene_biotype: protein_coding
description:
  YfcE family phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_04965
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcriptional repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: RPIT_04970
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: RPIT_04975
symbol: AQP46026.1
gene_biotype: protein_coding
description:
  16S rRNA (uracil(1498)-N(3))-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: RPIT_04980
symbol: tgt
gene_biotype: protein_coding
description:
  tRNA guanosine(34) transglycosylase Tgt; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose t [...]


ensembl_gene_id: RPIT_04985
symbol: AQP44247.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: RPIT_04995
symbol: AQP44249.1
gene_biotype: protein_coding
description:
  Phosphate starvation-inducible protein PhoH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05000
symbol: ybeY
gene_biotype: protein_coding
description:
  rRNA maturation RNase YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: RPIT_05005
symbol: AQP44251.1
gene_biotype: protein_coding
description:
  Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05015
symbol: era
gene_biotype: protein_coding
description:
  GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: RPIT_05035
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.


ensembl_gene_id: RPIT_05040
symbol: AQP44257.1
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05050
symbol: AQP44259.1
gene_biotype: protein_coding
description:
  Isoprenyl transferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: RPIT_05060
symbol: AQP44261.1
gene_biotype: protein_coding
description:
  Transcriptional repressor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family.


ensembl_gene_id: RPIT_05065
symbol: AQP46028.1
gene_biotype: protein_coding
description:
  Metal ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05080
symbol: AQP44264.1
gene_biotype: protein_coding
description:
  Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05085
symbol: AQP44265.1
gene_biotype: protein_coding
description:
  tRNA dihydrouridine synthase DusB; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: RPIT_05095
symbol: AQP44267.1
gene_biotype: protein_coding
description:
  Citrate (Si)-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the citrate synthase family.


ensembl_gene_id: RPIT_05100
symbol: AQP44268.1
gene_biotype: protein_coding
description:
  Deoxyguanosinetriphosphate triphosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the dGTPase family. Type 2 subfamily.


ensembl_gene_id: RPIT_05105
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: RPIT_05115
symbol: AQP44271.1
gene_biotype: protein_coding
description:
  Cation acetate symporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: RPIT_05120
symbol: AQP44272.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.


ensembl_gene_id: RPIT_05140
symbol: RPIT_05140
gene_biotype: protein_coding
description:
  Trehalose-6-phosphate synthase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.


ensembl_gene_id: RPIT_05170
symbol: AQP46029.1
gene_biotype: protein_coding
description:
  Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05180
symbol: AQP44279.1
gene_biotype: protein_coding
description:
  YggS family pyridoxal phosphate enzyme; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: RPIT_05195
symbol: AQP44282.1
gene_biotype: protein_coding
description:
  FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: RPIT_05205
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: RPIT_05210
symbol: AQP44285.1
gene_biotype: protein_coding
description:
  ACP S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05215
symbol: AQP44286.1
gene_biotype: protein_coding
description:
  PucR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05220
symbol: AQP44287.1
gene_biotype: protein_coding
description:
  precorrin-6A synthase (deacetylating); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05225
symbol: AQP44288.1
gene_biotype: protein_coding
description:
  Sodium:alanine symporter family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05235
symbol: AQP44290.1
gene_biotype: protein_coding
description:
  PHP domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05250
symbol: AQP44293.1
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase (acetyl-transferring), homodimeric type; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: RPIT_05260
symbol: AQP44294.1
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: RPIT_05285
symbol: AQP44298.1
gene_biotype: protein_coding
description:
  glutamyl-tRNA amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05290
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: RPIT_05295
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: RPIT_05300
symbol: AQP46032.1
gene_biotype: protein_coding
description:
  Cell division protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: RPIT_05310
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: RPIT_05325
symbol: AQP44304.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0301 (AlgH) family.


ensembl_gene_id: RPIT_05335
symbol: AQP44306.1
gene_biotype: protein_coding
description:
  Two-component sensor histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05350
symbol: hpf
gene_biotype: protein_coding
description:
  Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: RPIT_05355
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: RPIT_05385
symbol: ku
gene_biotype: protein_coding
description:
  Ku protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.


ensembl_gene_id: RPIT_05400
symbol: AQP44317.1
gene_biotype: protein_coding
description:
  Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05405
symbol: AQP44318.1
gene_biotype: protein_coding
description:
  tryptophan--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: RPIT_05410
symbol: AQP44319.1
gene_biotype: protein_coding
description:
  RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family.


ensembl_gene_id: RPIT_05430
symbol: AQP46035.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the helicase family. UvrD subfamily.


ensembl_gene_id: RPIT_05445
symbol: AQP44325.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: RPIT_05460
symbol: AQP44328.1
gene_biotype: protein_coding
description:
  DNA topoisomerase IV subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05465
symbol: AQP44329.1
gene_biotype: protein_coding
description:
  Lactate utilization protein C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05470
symbol: AQP44330.1
gene_biotype: protein_coding
description:
  Iron-sulfur cluster-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05475
symbol: AQP44331.1
gene_biotype: protein_coding
description:
  Fe-S oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05480
symbol: AQP44332.1
gene_biotype: protein_coding
description:
  Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: RPIT_05490
symbol: AQP44334.1
gene_biotype: protein_coding
description:
  Carbonic anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05495
symbol: AQP44335.1
gene_biotype: protein_coding
description:
  DNA topoisomerase IV; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05520
symbol: AQP44340.1
gene_biotype: protein_coding
description:
  Thymidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05535
symbol: AQP44343.1
gene_biotype: protein_coding
description:
  dUTPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05550
symbol: AQP44346.1
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.


ensembl_gene_id: RPIT_05570
symbol: RPIT_05570
gene_biotype: protein_coding
description:
  Daunorubicin resistance protein DrrC; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05575
symbol: AQP46037.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate--protein phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05590
symbol: AQP44350.1
gene_biotype: protein_coding
description:
  Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05605
symbol: AQP44353.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: RPIT_05610
symbol: acnA
gene_biotype: protein_coding
description:
  Aconitate hydratase; Catalyzes the conversion of citrate to isocitrate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05620
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: RPIT_05635
symbol: AQP44359.1
gene_biotype: protein_coding
description:
  Peptide-methionine (R)-S-oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MsrB Met sulfoxide reductase family.


ensembl_gene_id: RPIT_05670
symbol: AQP44362.1
gene_biotype: protein_coding
description:
  EamA family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05675
symbol: AQP44363.1
gene_biotype: protein_coding
description:
  Catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05680
symbol: AQP44364.1
gene_biotype: protein_coding
description:
  aminoacyl-tRNA deacylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.


ensembl_gene_id: RPIT_05690
symbol: thrS
gene_biotype: protein_coding
description:
  threonine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: RPIT_05695
symbol: AQP44366.1
gene_biotype: protein_coding
description:
  HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05710
symbol: AQP44369.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: RPIT_05730
symbol: AQP44372.1
gene_biotype: protein_coding
description:
  Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05755
symbol: pfp
gene_biotype: protein_coding
description:
  Pyrophosphate--fructose-6-phosphate 1-phosphotransferase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.


ensembl_gene_id: RPIT_05775
symbol: AQP44381.1
gene_biotype: protein_coding
description:
  threonylcarbamoyl-AMP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SUA5 family.


ensembl_gene_id: RPIT_05790
symbol: AQP44384.1
gene_biotype: protein_coding
description:
  GlcNAc-PI de-N-acetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05800
symbol: AQP44386.1
gene_biotype: protein_coding
description:
  DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05820
symbol: AQP44390.1
gene_biotype: protein_coding
description:
  ATP-dependent DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent DNA ligase family.


ensembl_gene_id: RPIT_05855
symbol: AQP44396.1
gene_biotype: protein_coding
description:
  Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05905
symbol: AQP44406.1
gene_biotype: protein_coding
description:
  Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05915
symbol: RPIT_05915
gene_biotype: protein_coding
description:
  Beta-glucosidase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05930
symbol: AQP44410.1
gene_biotype: protein_coding
description:
  CopG family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05950
symbol: AQP46042.1
gene_biotype: protein_coding
description:
  Short chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05960
symbol: AQP44414.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05965
symbol: AQP46043.1
gene_biotype: protein_coding
description:
  Pyridoxal kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pyridoxine kinase family.


ensembl_gene_id: RPIT_05975
symbol: rbpA-2
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters.


ensembl_gene_id: RPIT_05985
symbol: AQP44418.1
gene_biotype: protein_coding
description:
  Dolichol-phosphate mannosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_05990
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: RPIT_05995
symbol: AQP46045.1
gene_biotype: protein_coding
description:
  Flap endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06000
symbol: AQP44419.1
gene_biotype: protein_coding
description:
  Methionine biosynthesis protein MetW; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06005
symbol: metXS
gene_biotype: protein_coding
description:
  Homoserine O-acetyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine.


ensembl_gene_id: RPIT_06020
symbol: AQP44423.1
gene_biotype: protein_coding
description:
  O-acetylhomoserine aminocarboxypropyltransferase; Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06035
symbol: fhs
gene_biotype: protein_coding
description:
  Formate--tetrahydrofolate ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the formate--tetrahydrofolate ligase family.


ensembl_gene_id: RPIT_06040
symbol: AQP44427.1
gene_biotype: protein_coding
description:
  Four-helix bundle copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06060
symbol: selO
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.


ensembl_gene_id: RPIT_06090
symbol: der
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: RPIT_06095
symbol: cmk
gene_biotype: protein_coding
description:
  Cytidylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06100
symbol: AQP44437.1
gene_biotype: protein_coding
description:
  Prephenate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06115
symbol: RPIT_06115
gene_biotype: protein_coding
description:
  Transposase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06120
symbol: AQP46046.1
gene_biotype: protein_coding
description:
  Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.


ensembl_gene_id: RPIT_06130
symbol: AQP44441.1
gene_biotype: protein_coding
description:
  Ribulose-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribulose-phosphate 3-epimerase family.


ensembl_gene_id: RPIT_06135
symbol: AQP44442.1
gene_biotype: protein_coding
description:
  rRNA cytosine-C5-methylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: RPIT_06140
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: RPIT_06145
symbol: priA
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: RPIT_06150
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: RPIT_06155
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: RPIT_06165
symbol: AQP44448.1
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06170
symbol: AQP44449.1
gene_biotype: protein_coding
description:
  Orotidine-5'-phosphate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06175
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase (quinone); Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: RPIT_06180
symbol: carB
gene_biotype: protein_coding
description:
  Carbamoyl phosphate synthase large subunit; Four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06185
symbol: carA
gene_biotype: protein_coding
description:
  Carbamoyl phosphate synthase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CarA family.


ensembl_gene_id: RPIT_06190
symbol: nusB
gene_biotype: protein_coding
description:
  Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: RPIT_06195
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: RPIT_06200
symbol: AQP46047.1
gene_biotype: protein_coding
description:
  Choline transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BCCT transporter (TC 2.A.15) family.


ensembl_gene_id: RPIT_06205
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: RPIT_06210
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: RPIT_06215
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: RPIT_06225
symbol: mltG
gene_biotype: protein_coding
description:
  Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: RPIT_06230
symbol: AQP44458.1
gene_biotype: protein_coding
description:
  Holliday junction resolvase RuvX; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: RPIT_06235
symbol: alaS
gene_biotype: protein_coding
description:
  alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: RPIT_06245
symbol: AQP44461.1
gene_biotype: protein_coding
description:
  DUF948 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06255
symbol: AQP44463.1
gene_biotype: protein_coding
description:
  Bcr/CflA family drug resistance efflux transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06260
symbol: aspS
gene_biotype: protein_coding
description:
  aspartate--tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: RPIT_06275
symbol: AQP44467.1
gene_biotype: protein_coding
description:
  histidine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06290
symbol: AQP44469.1
gene_biotype: protein_coding
description:
  Bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: RPIT_06295
symbol: AQP44470.1
gene_biotype: protein_coding
description:
  Potassium transporter Kef; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06300
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: RPIT_06305
symbol: secF
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: RPIT_06310
symbol: secD
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: RPIT_06315
symbol: AQP44473.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit YajC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06320
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction branch migration DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: RPIT_06325
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction branch migration protein RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: RPIT_06330
symbol: ruvC
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: RPIT_06355
symbol: AQP44480.1
gene_biotype: protein_coding
description:
  Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06360
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06365
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: RPIT_06370
symbol: hisB
gene_biotype: protein_coding
description:
  Imidazoleglycerol-phosphate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06375
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: RPIT_06380
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: RPIT_06390
symbol: AQP44486.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06395
symbol: AQP44487.1
gene_biotype: protein_coding
description:
  Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06400
symbol: AQP46053.1
gene_biotype: protein_coding
description:
  Iron transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06405
symbol: potA
gene_biotype: protein_coding
description:
  Polyamine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: RPIT_06415
symbol: gltD
gene_biotype: protein_coding
description:
  Glutamate synthase is composed of subunits alpha and beta; beta subunit is a flavin adenine dinucleotide-NADPH dependent oxidoreductase; provides electrons to the alpha subunit, which binds L-glutamine and 2-oxoglutarate and forms L-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06420
symbol: AQP44491.1
gene_biotype: protein_coding
description:
  Glutamate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06430
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: RPIT_06435
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: RPIT_06440
symbol: trpC
gene_biotype: protein_coding
description:
  Indole-3-glycerol phosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TrpC family.


ensembl_gene_id: RPIT_06455
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]


ensembl_gene_id: RPIT_06460
symbol: hisI
gene_biotype: protein_coding
description:
  phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.


ensembl_gene_id: RPIT_06465
symbol: AQP44497.1
gene_biotype: protein_coding
description:
  TIGR03085 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06505
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: RPIT_06510
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: RPIT_06515
symbol: gatC
gene_biotype: protein_coding
description:
  asparaginyl/glutamyl-tRNA amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: RPIT_06530
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA 2-thiouridine(34) synthase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: RPIT_06535
symbol: AQP44509.1
gene_biotype: protein_coding
description:
  S9 family peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06540
symbol: AQP44510.1
gene_biotype: protein_coding
description:
  Class V aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06545
symbol: AQP44511.1
gene_biotype: protein_coding
description:
  Glycogen debranching enzyme GlgX; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: RPIT_06550
symbol: glgE
gene_biotype: protein_coding
description:
  Alpha-1,4-glucan--maltose-1-phosphate maltosyltransferase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.


ensembl_gene_id: RPIT_06560
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: RPIT_06570
symbol: RPIT_06570
gene_biotype: protein_coding
description:
  NUDIX hydrolase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06580
symbol: AQP44517.1
gene_biotype: protein_coding
description:
  Malto-oligosyltrehalose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06585
symbol: AQP44518.1
gene_biotype: protein_coding
description:
  Malto-oligosyltrehalose trehalohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06595
symbol: AQP44520.1
gene_biotype: protein_coding
description:
  Phosphoglucomutase, alpha-D-glucose phosphate-specific; Catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06600
symbol: AQP44521.1
gene_biotype: protein_coding
description:
  Membrane-flanked domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06605
symbol: AQP44522.1
gene_biotype: protein_coding
description:
  methylmalonyl-CoA epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06615
symbol: AQP44524.1
gene_biotype: protein_coding
description:
  AI-2E family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06620
symbol: nucS
gene_biotype: protein_coding
description:
  Endonuclease; Cleaves both 3' and 5' ssDNA extremities of branched DNA structures; Belongs to the NucS endonuclease family.


ensembl_gene_id: RPIT_06645
symbol: AQP44530.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06650
symbol: AQP44531.1
gene_biotype: protein_coding
description:
  ATP:cob(I)alamin adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Cob(I)alamin adenosyltransferase family.


ensembl_gene_id: RPIT_06660
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase F1 subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: RPIT_06665
symbol: atpD
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: RPIT_06670
symbol: atpG
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: RPIT_06675
symbol: atpA
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: RPIT_06680
symbol: atpH
gene_biotype: protein_coding
description:
  Hypothetical protein; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: RPIT_06685
symbol: atpF
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: RPIT_06690
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0 subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: RPIT_06695
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0 subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: RPIT_06710
symbol: AQP44543.1
gene_biotype: protein_coding
description:
  Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06720
symbol: prmC
gene_biotype: protein_coding
description:
  protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: RPIT_06725
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: RPIT_06735
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: RPIT_06740
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: RPIT_06745
symbol: AQP44550.1
gene_biotype: protein_coding
description:
  Homoserine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06750
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: RPIT_06770
symbol: kgd
gene_biotype: protein_coding
description:
  Alpha-ketoglutarate decarboxylase; Kgd; produces succinic semialdehyde; part of alternative pathway from alpha-ketoglutarate to succinate; essential for normal growth; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06775
symbol: galK
gene_biotype: protein_coding
description:
  Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.


ensembl_gene_id: RPIT_06795
symbol: RPIT_06795
gene_biotype: protein_coding
description:
  ATPase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06800
symbol: AQP46061.1
gene_biotype: protein_coding
description:
  RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: RPIT_06805
symbol: AQP44557.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SOS response-associated peptidase family.


ensembl_gene_id: RPIT_06815
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: RPIT_06820
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: RPIT_06825
symbol: AQP44560.1
gene_biotype: protein_coding
description:
  Histidinol-phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06830
symbol: AQP44561.1
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: RPIT_06845
symbol: AQP44564.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06925
symbol: recB
gene_biotype: protein_coding
description:
  Hypothetical protein; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme [...]


ensembl_gene_id: RPIT_06930
symbol: recD
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V subunit alpha; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and re [...]


ensembl_gene_id: RPIT_06935
symbol: AQP44580.1
gene_biotype: protein_coding
description:
  Aromatic amino acid aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06940
symbol: AQP44581.1
gene_biotype: protein_coding
description:
  Hypothetical protein; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.


ensembl_gene_id: RPIT_06945
symbol: AQP44582.1
gene_biotype: protein_coding
description:
  Glutamine amidotransferase; Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_06955
symbol: sigA
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: RPIT_06960
symbol: AQP44585.1
gene_biotype: protein_coding
description:
  RNA polymerase subunit sigma; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: RPIT_06970
symbol: AQP44587.1
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase HrpA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07000
symbol: ilvD
gene_biotype: protein_coding
description:
  Dihydroxy-acid dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IlvD/Edd family.


ensembl_gene_id: RPIT_07010
symbol: AQP44594.1
gene_biotype: protein_coding
description:
  Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07015
symbol: AQP44595.1
gene_biotype: protein_coding
description:
  Helix-turn-helix transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07020
symbol: AQP44596.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: RPIT_07025
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional regulator NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: RPIT_07035
symbol: lexA
gene_biotype: protein_coding
description:
  Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: RPIT_07040
symbol: AQP44600.1
gene_biotype: protein_coding
description:
  ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07045
symbol: hflX
gene_biotype: protein_coding
description:
  GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: RPIT_07050
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: RPIT_07055
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: RPIT_07070
symbol: RPIT_07070
gene_biotype: protein_coding
description:
  tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07085
symbol: recA
gene_biotype: protein_coding
description:
  Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: RPIT_07095
symbol: AQP46065.1
gene_biotype: protein_coding
description:
  Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07105
symbol: AQP44610.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.


ensembl_gene_id: RPIT_07115
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: RPIT_07120
symbol: AQP44613.1
gene_biotype: protein_coding
description:
  Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07125
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-phosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: RPIT_07130
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase A; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: RPIT_07140
symbol: AQP44616.1
gene_biotype: protein_coding
description:
  Proteasome protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07150
symbol: AQP44618.1
gene_biotype: protein_coding
description:
  Deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07155
symbol: AQP44619.1
gene_biotype: protein_coding
description:
  TIGR02453 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07160
symbol: AQP44620.1
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07180
symbol: AQP44623.1
gene_biotype: protein_coding
description:
  Ornithine--oxo-acid transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: RPIT_07185
symbol: AQP46068.1
gene_biotype: protein_coding
description:
  Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07190
symbol: AQP46069.1
gene_biotype: protein_coding
description:
  AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07245
symbol: RPIT_07245
gene_biotype: protein_coding
description:
  Cation transporter; Incomplete; partial on complete genome; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07250
symbol: AQP44630.1
gene_biotype: protein_coding
description:
  Redoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07275
symbol: AQP44633.1
gene_biotype: protein_coding
description:
  DUF305 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07290
symbol: lgt
gene_biotype: protein_coding
description:
  Diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: RPIT_07305
symbol: AQP44638.1
gene_biotype: protein_coding
description:
  Copper-translocating P-type ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07360
symbol: AQP44649.1
gene_biotype: protein_coding
description:
  Heme-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07425
symbol: RPIT_07425
gene_biotype: protein_coding
description:
  Hypothetical protein; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07490
symbol: RPIT_07490
gene_biotype: protein_coding
description:
  IS110 family transposase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07500
symbol: AQP44672.1
gene_biotype: protein_coding
description:
  Rifampin ADP-ribosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07550
symbol: RPIT_07550
gene_biotype: protein_coding
description:
  IS1380 family transposase; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07565
symbol: RPIT_07565
gene_biotype: protein_coding
description:
  IS1380 family transposase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07575
symbol: AQP44682.1
gene_biotype: protein_coding
description:
  IS1380 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07590
symbol: AQP44685.1
gene_biotype: protein_coding
description:
  Restriction endonuclease subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07605
symbol: AQP44688.1
gene_biotype: protein_coding
description:
  Antitoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07620
symbol: AQP44690.1
gene_biotype: protein_coding
description:
  Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07665
symbol: AQP44699.1
gene_biotype: protein_coding
description:
  Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07730
symbol: RPIT_07730
gene_biotype: protein_coding
description:
  propionyl-CoA--succinate CoA transferase; Frameshifted; incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07745
symbol: RPIT_07745
gene_biotype: protein_coding
description:
  ATP-dependent chaperone ClpB; Frameshifted; incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07770
symbol: AQP44716.1
gene_biotype: protein_coding
description:
  IMP dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07775
symbol: AQP44717.1
gene_biotype: protein_coding
description:
  uracil-DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07785
symbol: RPIT_07785
gene_biotype: protein_coding
description:
  Peptidase C56; Incomplete; partial on complete genome; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07815
symbol: vapC-3
gene_biotype: protein_coding
description:
  Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.


ensembl_gene_id: RPIT_07825
symbol: AQP44725.1
gene_biotype: protein_coding
description:
  Glycoside hydrolase family 6; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase family 6.


ensembl_gene_id: RPIT_07860
symbol: RPIT_07860
gene_biotype: protein_coding
description:
  Acetyltransferase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07900
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: RPIT_07905
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: RPIT_07910
symbol: AQP44740.1
gene_biotype: protein_coding
description:
  IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07935
symbol: AQP44743.1
gene_biotype: protein_coding
description:
  2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07940
symbol: AQP44744.1
gene_biotype: protein_coding
description:
  Citramalate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the alpha-IPM synthase/homocitrate synthase family.


ensembl_gene_id: RPIT_07945
symbol: AQP44745.1
gene_biotype: protein_coding
description:
  Catalyzes the oxidation of 3-isopropylmalate to 3-carboxy-4-methyl-2-oxopentanoate in leucine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07960
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: RPIT_07965
symbol: AQP44748.1
gene_biotype: protein_coding
description:
  Acetolactate synthase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07970
symbol: AQP44749.1
gene_biotype: protein_coding
description:
  Acetolactate synthase large subunit; catalyzes the formation of 2-acetolactate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07980
symbol: AQP44751.1
gene_biotype: protein_coding
description:
  HIT family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_07985
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: RPIT_07995
symbol: AQP44753.1
gene_biotype: protein_coding
description:
  Lipid kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_08000
symbol: tatC
gene_biotype: protein_coding
description:
  Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: RPIT_08005
symbol: tatA
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: RPIT_08020
symbol: gluQ
gene_biotype: protein_coding
description:
  tRNA glutamyl-Q(34) synthetase GluQRS; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily.


ensembl_gene_id: RPIT_08030
symbol: AQP44760.1
gene_biotype: protein_coding
description:
  MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: RPIT_08035
symbol: AQP44761.1
gene_biotype: protein_coding
description:
  SMC-Scp complex subunit ScpB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_08040
symbol: AQP44762.1
gene_biotype: protein_coding
description:
  Segregation/condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: RPIT_08050
symbol: AQP46082.1
gene_biotype: protein_coding
description:
  Chromosome partitioning ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_08065
symbol: RPIT_08065
gene_biotype: protein_coding
description:
  Hypothetical protein; Frameshifted; incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_08070
symbol: xerD
gene_biotype: protein_coding
description:
  Site-specific tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: RPIT_08075
symbol: AQP44765.1
gene_biotype: protein_coding
description:
  ADP-ribose pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_08080
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: RPIT_08095
symbol: nadK
gene_biotype: protein_coding
description:
  NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: RPIT_08100
symbol: AQP44770.1
gene_biotype: protein_coding
description:
  TlyA family rRNA (cytidine-2'-O)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_08120
symbol: RPIT_08120
gene_biotype: protein_coding
description:
  Endoglucanase; Incomplete; partial on complete genome; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_08150
symbol: RPIT_08150
gene_biotype: protein_coding
description:
  ISL3 family transposase; Incomplete; partial on complete genome; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: RPIT_08185
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: RPIT_08190
symbol: AQP44778.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_08195
symbol: argH
gene_biotype: protein_coding
description:
  Argininosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_08205
symbol: argD
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: RPIT_08210
symbol: argB
gene_biotype: protein_coding
description:
  Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: RPIT_08215
symbol: argJ
gene_biotype: protein_coding
description:
  Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: RPIT_08220
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: RPIT_08235
symbol: AQP44787.1
gene_biotype: protein_coding
description:
  LD-carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_08255
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanine--tRNA ligase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: RPIT_08260
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanine--tRNA ligase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: RPIT_08265
symbol: AQP44793.1
gene_biotype: protein_coding
description:
  rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: RPIT_08270
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: RPIT_08275
symbol: rpmI
gene_biotype: protein_coding
description:
  50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL35 family.


ensembl_gene_id: RPIT_08280
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: RPIT_08300
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.


ensembl_gene_id: RPIT_08305
symbol: hisE
gene_biotype: protein_coding
description:
  phosphoribosyl-ATP diphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_08310
symbol: mshC
gene_biotype: protein_coding
description:
  cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside ligase; Catalyzes the ATP-dependent condensation of GlcN-Ins and L- cysteine to form L-Cys-GlcN-Ins; Belongs to the class-I aminoacyl-tRNA synthetase family. MshC subfamily.


ensembl_gene_id: RPIT_08330
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: RPIT_08425
symbol: AQP44817.1
gene_biotype: protein_coding
description:
  Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_08480
symbol: RPIT_08480
gene_biotype: protein_coding
description:
  Tellurium resistance protein TerC; Frameshifted; incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_08525
symbol: RPIT_08525
gene_biotype: protein_coding
description:
  ECF transporter S component; Cobalamin riboswitch; Derived by automated computational analysis using gene prediction method: cmsearch.


ensembl_gene_id: RPIT_08535
symbol: AQP44833.1
gene_biotype: protein_coding
description:
  DNA protecting protein DprA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_08545
symbol: RPIT_08545
gene_biotype: protein_coding
description:
  Mg chelatase-like protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0102 family.


ensembl_gene_id: RPIT_08550
symbol: AQP44835.1
gene_biotype: protein_coding
description:
  Protein often found in actinomycetes clustered with signal peptidase and/or RNaseHII; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_08560
symbol: AQP46092.1
gene_biotype: protein_coding
description:
  Signal peptidase I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.


ensembl_gene_id: RPIT_08565
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: RPIT_08570
symbol: AQP44837.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_08575
symbol: sdhA
gene_biotype: protein_coding
description:
  Part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_08585
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanosine(37)-N1)-methyltransferase TrmD; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: RPIT_08590
symbol: rimM
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: RPIT_08595
symbol: AQP44841.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0109 family.


ensembl_gene_id: RPIT_08600
symbol: rpsP
gene_biotype: protein_coding
description:
  30S ribosomal protein S16; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family.


ensembl_gene_id: RPIT_08630
symbol: RPIT_08630
gene_biotype: protein_coding
description:
  Recombinase RecQ; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_08650
symbol: AQP44849.1
gene_biotype: protein_coding
description:
  Export ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_08665
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: RPIT_08670
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: RPIT_08675
symbol: AQP44854.1
gene_biotype: protein_coding
description:
  Sugar translocase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_08680
symbol: mutM
gene_biotype: protein_coding
description:
  DNA-formamidopyrimidine glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: RPIT_08685
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: RPIT_08690
symbol: rpmF
gene_biotype: protein_coding
description:
  50S ribosomal protein L32; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL32 family.


ensembl_gene_id: RPIT_08695
symbol: AQP44857.1
gene_biotype: protein_coding
description:
  Metal-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_08700
symbol: coaD
gene_biotype: protein_coding
description:
  Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: RPIT_08705
symbol: AQP44859.1
gene_biotype: protein_coding
description:
  16S rRNA (guanine(966)-N(2))-methyltransferase RsmD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_08710
symbol: AQP44860.1
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_08725
symbol: rpmB
gene_biotype: protein_coding
description:
  50S ribosomal protein L28; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family.


ensembl_gene_id: RPIT_08730
symbol: AQP46095.1
gene_biotype: protein_coding
description:
  Ribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_08735
symbol: AQP44864.1
gene_biotype: protein_coding
description:
  Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_08745
symbol: AQP44866.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0371 family.


ensembl_gene_id: RPIT_08760
symbol: AQP44869.1
gene_biotype: protein_coding
description:
  B12-binding domain-containing radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_08765
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: RPIT_08775
symbol: AQP44872.1
gene_biotype: protein_coding
description:
  Dihydrofolate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: RPIT_08785
symbol: valS
gene_biotype: protein_coding
description:
  valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner.


ensembl_gene_id: RPIT_08800
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: RPIT_08805
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: RPIT_08820
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: RPIT_08825
symbol: AQP44882.1
gene_biotype: protein_coding
description:
  Patatin family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_08875
symbol: RPIT_08875
gene_biotype: protein_coding
description:
  Alpha-galactosidase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_08880
symbol: glsA
gene_biotype: protein_coding
description:
  Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaminase family.


ensembl_gene_id: RPIT_08910
symbol: AQP44894.1
gene_biotype: protein_coding
description:
  DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPG family.


ensembl_gene_id: RPIT_08915
symbol: AQP44895.1
gene_biotype: protein_coding
description:
  Ribose-5-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_08925
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase (NAD(+)) LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: RPIT_08940
symbol: pyrR
gene_biotype: protein_coding
description:
  Bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.


ensembl_gene_id: RPIT_08945
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: RPIT_08950
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: RPIT_08955
symbol: AQP44903.1
gene_biotype: protein_coding
description:
  Phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.


ensembl_gene_id: RPIT_08980
symbol: AQP44908.1
gene_biotype: protein_coding
description:
  L-ribulose-5-phosphate 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_08990
symbol: AQP44910.1
gene_biotype: protein_coding
description:
  Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_08995
symbol: AQP44911.1
gene_biotype: protein_coding
description:
  MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09000
symbol: AQP44912.1
gene_biotype: protein_coding
description:
  FAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09020
symbol: AQP44916.1
gene_biotype: protein_coding
description:
  Energy-dependent translational throttle protein EttA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09060
symbol: orn
gene_biotype: protein_coding
description:
  Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family.


ensembl_gene_id: RPIT_09075
symbol: RPIT_09075
gene_biotype: protein_coding
description:
  Recombinase family protein; Frameshifted; incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09080
symbol: AQP44923.1
gene_biotype: protein_coding
description:
  IS1634 family transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09095
symbol: AQP44926.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: RPIT_09115
symbol: AQP46099.1
gene_biotype: protein_coding
description:
  DNA (cytosine-5-)-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.


ensembl_gene_id: RPIT_09120
symbol: AQP46100.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09125
symbol: AQP44930.1
gene_biotype: protein_coding
description:
  Sulfate permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09180
symbol: RPIT_09180
gene_biotype: protein_coding
description:
  MFS transporter; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09190
symbol: RPIT_09190
gene_biotype: protein_coding
description:
  Deoxyribonuclease; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09205
symbol: AQP44940.1
gene_biotype: protein_coding
description:
  Maltose alpha-D-glucosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09210
symbol: AQP44941.1
gene_biotype: protein_coding
description:
  Thiol reductase thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09280
symbol: AQP44954.1
gene_biotype: protein_coding
description:
  Ketosteroid isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09320
symbol: RPIT_09320
gene_biotype: protein_coding
description:
  tRNA-Lys; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09470
symbol: AQP44984.1
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: RPIT_09480
symbol: AQP44986.1
gene_biotype: protein_coding
description:
  Diacylglycerol kinase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: RPIT_09490
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: RPIT_09495
symbol: AQP44989.1
gene_biotype: protein_coding
description:
  Non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: RPIT_09500
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: RPIT_09515
symbol: clpS
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease adapter ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: RPIT_09520
symbol: AQP44994.1
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: RPIT_09535
symbol: AQP44997.1
gene_biotype: protein_coding
description:
  4-alpha-glucanotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09555
symbol: ahcY
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: RPIT_09560
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: RPIT_09570
symbol: AQP45004.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0434 family.


ensembl_gene_id: RPIT_09575
symbol: manB
gene_biotype: protein_coding
description:
  Phosphomannomutase/phosphoglucomutase; Converts mannose-6-phosphate to mannose-1-phosphate; the resulting product is then converted to GDP-mannose by ManC which is then used in the synthesis of mannose-containing glycoconjugates that are important for mediating entry into host cells; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09600
symbol: whiB-3
gene_biotype: protein_coding
description:
  Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.


ensembl_gene_id: RPIT_09605
symbol: AQP45011.1
gene_biotype: protein_coding
description:
  Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09610
symbol: AQP45012.1
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09620
symbol: AQP45014.1
gene_biotype: protein_coding
description:
  Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09635
symbol: purE
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: RPIT_09640
symbol: purK
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: RPIT_09655
symbol: RPIT_09655
gene_biotype: protein_coding
description:
  biotin--[acetyl-CoA-carboxylase] ligase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09665
symbol: AQP46109.1
gene_biotype: protein_coding
description:
  Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: RPIT_09680
symbol: AQP45023.1
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09685
symbol: AQP46110.1
gene_biotype: protein_coding
description:
  acetyl-/propionyl-CoA carboxylase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09695
symbol: AQP45025.1
gene_biotype: protein_coding
description:
  AMP-dependent synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09700
symbol: AQP46111.1
gene_biotype: protein_coding
description:
  NAD(P)H-quinone dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09705
symbol: AQP45026.1
gene_biotype: protein_coding
description:
  Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: RPIT_09710
symbol: AQP45027.1
gene_biotype: protein_coding
description:
  Phosphomannomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09730
symbol: metG
gene_biotype: protein_coding
description:
  methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: RPIT_09755
symbol: AQP45035.1
gene_biotype: protein_coding
description:
  Adenosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09765
symbol: AQP45036.1
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: RPIT_09780
symbol: AQP45039.1
gene_biotype: protein_coding
description:
  Heme ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09785
symbol: AQP45040.1
gene_biotype: protein_coding
description:
  BMP family ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09795
symbol: AQP45042.1
gene_biotype: protein_coding
description:
  Phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09805
symbol: purU
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).


ensembl_gene_id: RPIT_09820
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.


ensembl_gene_id: RPIT_09825
symbol: AQP46114.1
gene_biotype: protein_coding
description:
  Vitamin K epoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09840
symbol: folD
gene_biotype: protein_coding
description:
  Bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: RPIT_09845
symbol: purH
gene_biotype: protein_coding
description:
  Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09850
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: RPIT_09865
symbol: sucD
gene_biotype: protein_coding
description:
  succinate--CoA ligase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: RPIT_09870
symbol: sucC
gene_biotype: protein_coding
description:
  succinate--CoA ligase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: RPIT_09880
symbol: AQP45058.1
gene_biotype: protein_coding
description:
  DNA helicase PcrA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09885
symbol: AQP45059.1
gene_biotype: protein_coding
description:
  Cardiolipin synthase B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09930
symbol: AQP45068.1
gene_biotype: protein_coding
description:
  Cysteine synthase A; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family.


ensembl_gene_id: RPIT_09945
symbol: AQP45071.1
gene_biotype: protein_coding
description:
  Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09955
symbol: guaB
gene_biotype: protein_coding
description:
  IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: RPIT_09965
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: RPIT_09970
symbol: groS
gene_biotype: protein_coding
description:
  Co-chaperone GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: RPIT_09975
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase BioB; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: RPIT_09980
symbol: AQP45076.1
gene_biotype: protein_coding
description:
  Maltose acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_09995
symbol: pxpA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.


ensembl_gene_id: RPIT_10010
symbol: AQP45082.1
gene_biotype: protein_coding
description:
  7,8-dihydro-8-oxoguanine triphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10020
symbol: RPIT_10020
gene_biotype: protein_coding
description:
  Glutathione ABC transporter ATP-binding protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10035
symbol: tsaD
gene_biotype: protein_coding
description:
  tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: RPIT_10045
symbol: AQP45088.1
gene_biotype: protein_coding
description:
  tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex dimerization subunit type 1 TsaB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10050
symbol: AQP45089.1
gene_biotype: protein_coding
description:
  tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10060
symbol: AQP45091.1
gene_biotype: protein_coding
description:
  Alpha-mannosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10075
symbol: nnrE
gene_biotype: protein_coding
description:
  NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of bot [...]


ensembl_gene_id: RPIT_10080
symbol: acpS
gene_biotype: protein_coding
description:
  holo-ACP synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: RPIT_10085
symbol: glmS
gene_biotype: protein_coding
description:
  Glutamine--fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: RPIT_10090
symbol: coaA
gene_biotype: protein_coding
description:
  Type I pantothenate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10100
symbol: AQP45097.1
gene_biotype: protein_coding
description:
  Xaa-Pro aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M24B family.


ensembl_gene_id: RPIT_10120
symbol: AQP45101.1
gene_biotype: protein_coding
description:
  Magnesium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10135
symbol: AQP45104.1
gene_biotype: protein_coding
description:
  Sodium:proton antiporter; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: RPIT_10150
symbol: AQP45107.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor SigE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: RPIT_10155
symbol: dapA
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: RPIT_10160
symbol: AQP45109.1
gene_biotype: protein_coding
description:
  Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10165
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: RPIT_10175
symbol: AQP45111.1
gene_biotype: protein_coding
description:
  DUF3117 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10185
symbol: AQP45113.1
gene_biotype: protein_coding
description:
  Rossman fold protein, TIGR00730 family; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LOG family.


ensembl_gene_id: RPIT_10190
symbol: AQP45114.1
gene_biotype: protein_coding
description:
  Succinyl-diaminopimelate desuccinylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10205
symbol: AQP45117.1
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10210
symbol: AQP45118.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0176 family.


ensembl_gene_id: RPIT_10215
symbol: dapD
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA.


ensembl_gene_id: RPIT_10235
symbol: AQP45123.1
gene_biotype: protein_coding
description:
  methylmalonyl-CoA carboxyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10240
symbol: AQP46120.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the OadG family.


ensembl_gene_id: RPIT_10250
symbol: AQP45125.1
gene_biotype: protein_coding
description:
  glutaconyl-CoA decarboxylase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10255
symbol: AQP45126.1
gene_biotype: protein_coding
description:
  Succinyldiaminopimelate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10260
symbol: AQP45127.1
gene_biotype: protein_coding
description:
  Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: RPIT_10275
symbol: AQP45130.1
gene_biotype: protein_coding
description:
  Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transketolase family.


ensembl_gene_id: RPIT_10285
symbol: AQP45132.1
gene_biotype: protein_coding
description:
  Phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10315
symbol: AQP45138.1
gene_biotype: protein_coding
description:
  Nicotinamidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10330
symbol: AQP45140.1
gene_biotype: protein_coding
description:
  Rhodanese; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10335
symbol: AQP45141.1
gene_biotype: protein_coding
description:
  Serine O-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10385
symbol: AQP45151.1
gene_biotype: protein_coding
description:
  Pyridoxamine 5'-phosphate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10390
symbol: AQP46122.1
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: RPIT_10405
symbol: AQP45154.1
gene_biotype: protein_coding
description:
  ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10420
symbol: AQP45157.1
gene_biotype: protein_coding
description:
  Addiction module antidote protein, HigA family; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10425
symbol: AQP45158.1
gene_biotype: protein_coding
description:
  Plasmid maintenance system killer; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10435
symbol: AQP45160.1
gene_biotype: protein_coding
description:
  Lincomycin resistance protein LmrB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10465
symbol: ychF
gene_biotype: protein_coding
description:
  Redox-regulated ATPase YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: RPIT_10475
symbol: AQP45168.1
gene_biotype: protein_coding
description:
  Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: RPIT_10480
symbol: AQP46123.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: RPIT_10495
symbol: AQP45171.1
gene_biotype: protein_coding
description:
  M18 family aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10505
symbol: ilvA
gene_biotype: protein_coding
description:
  Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: RPIT_10510
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: RPIT_10520
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: RPIT_10525
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: RPIT_10540
symbol: AQP45180.1
gene_biotype: protein_coding
description:
  Hemolysin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10550
symbol: AQP45182.1
gene_biotype: protein_coding
description:
  Thioredoxin domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10555
symbol: AQP46124.1
gene_biotype: protein_coding
description:
  Rhomboid family intramembrane serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10560
symbol: mca
gene_biotype: protein_coding
description:
  Mycothiol conjugate amidase Mca; A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl-inositol) S- conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics; Belongs to the MshB deacetylase family. Mca subfamily.


ensembl_gene_id: RPIT_10570
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: RPIT_10585
symbol: ung
gene_biotype: protein_coding
description:
  uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: RPIT_10595
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: RPIT_10630
symbol: AQP46126.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family.


ensembl_gene_id: RPIT_10655
symbol: AQP45198.1
gene_biotype: protein_coding
description:
  Flotillin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10680
symbol: AQP45202.1
gene_biotype: protein_coding
description:
  DNA alkylation repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10695
symbol: AQP46127.1
gene_biotype: protein_coding
description:
  Septum formation initiator family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10705
symbol: eno
gene_biotype: protein_coding
description:
  Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: RPIT_10710
symbol: AQP45206.1
gene_biotype: protein_coding
description:
  Nucleoside triphosphate pyrophosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10720
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: RPIT_10725
symbol: pth
gene_biotype: protein_coding
description:
  aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: RPIT_10730
symbol: rplY
gene_biotype: protein_coding
description:
  50S ribosomal protein L25/general stress protein Ctc; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: RPIT_10735
symbol: AQP45211.1
gene_biotype: protein_coding
description:
  NADPH-dependent ferric siderophore reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10740
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: RPIT_10745
symbol: glmU
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: RPIT_10815
symbol: RPIT_10815
gene_biotype: protein_coding
description:
  L-rhamnose 1-epimerase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10830
symbol: AQP45228.1
gene_biotype: protein_coding
description:
  Dimethyl sulfoxide reductase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: RPIT_10840
symbol: RPIT_10840
gene_biotype: protein_coding
description:
  Dimethylsulfoxide reductase, chain B; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10850
symbol: AQP45230.1
gene_biotype: protein_coding
description:
  DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10860
symbol: AQP45232.1
gene_biotype: protein_coding
description:
  Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10865
symbol: AQP45233.1
gene_biotype: protein_coding
description:
  Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10890
symbol: RPIT_10890
gene_biotype: protein_coding
description:
  uroporphyrinogen-III synthase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: RPIT_10900
symbol: AQP45239.1
gene_biotype: protein_coding
description:
  Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: RPIT_10920
symbol: AQP45243.1
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10925
symbol: AQP45244.1
gene_biotype: protein_coding
description:
  DNA-3-methyladenine glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10945
symbol: ispE
gene_biotype: protein_coding
description:
  4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: RPIT_10950
symbol: rsmA
gene_biotype: protein_coding
description:
  16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: RPIT_10960
symbol: rsmI
gene_biotype: protein_coding
description:
  16S rRNA (cytidine(1402)-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: RPIT_10965
symbol: AQP46131.1
gene_biotype: protein_coding
description:
  Dolichyl-phosphate-mannose--protein mannosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_10990
symbol: RPIT_10990
gene_biotype: protein_coding
description:
  DNA alkylation repair protein; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11000
symbol: AQP45257.1
gene_biotype: protein_coding
description:
  Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11010
symbol: AQP45258.1
gene_biotype: protein_coding
description:
  Glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11030
symbol: AQP45261.1
gene_biotype: protein_coding
description:
  5-formyltetrahydrofolate cyclo-ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.


ensembl_gene_id: RPIT_11035
symbol: AQP45262.1
gene_biotype: protein_coding
description:
  FmdB family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11045
symbol: AQP45264.1
gene_biotype: protein_coding
description:
  Mechanosensitive ion channel protein MscL; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11055
symbol: AQP45266.1
gene_biotype: protein_coding
description:
  UTP--glucose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11070
symbol: AQP45268.1
gene_biotype: protein_coding
description:
  Hemerythrin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11095
symbol: AQP45272.1
gene_biotype: protein_coding
description:
  Pyruvate:ferredoxin (flavodoxin) oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11100
symbol: AQP45273.1
gene_biotype: protein_coding
description:
  Glutamate synthase; Unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11105
symbol: AQP45274.1
gene_biotype: protein_coding
description:
  Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thioredoxin family.


ensembl_gene_id: RPIT_11115
symbol: AQP45276.1
gene_biotype: protein_coding
description:
  Dihydrofolate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11120
symbol: AQP45277.1
gene_biotype: protein_coding
description:
  N-acetylglucosamine-6-phosphate deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11125
symbol: AQP45278.1
gene_biotype: protein_coding
description:
  Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.


ensembl_gene_id: RPIT_11140
symbol: AQP45281.1
gene_biotype: protein_coding
description:
  Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.


ensembl_gene_id: RPIT_11145
symbol: AQP45282.1
gene_biotype: protein_coding
description:
  Pyruvate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11165
symbol: AQP45285.1
gene_biotype: protein_coding
description:
  Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11170
symbol: nagB
gene_biotype: protein_coding
description:
  Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily.


ensembl_gene_id: RPIT_11185
symbol: AQP45289.1
gene_biotype: protein_coding
description:
  Copper homeostasis protein CutC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CutC family.


ensembl_gene_id: RPIT_11195
symbol: AQP45291.1
gene_biotype: protein_coding
description:
  Glutamine-hydrolyzing GMP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11215
symbol: AQP45295.1
gene_biotype: protein_coding
description:
  Mannose-6-phosphate isomerase, class I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11240
symbol: RPIT_11240
gene_biotype: protein_coding
description:
  Sn-glycerol-3-phosphate ABC transporter ATP-binding protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11245
symbol: AQP45299.1
gene_biotype: protein_coding
description:
  Lipopolysaccharide kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11260
symbol: AQP46136.1
gene_biotype: protein_coding
description:
  Disulfide bond formation protein DsbA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11265
symbol: cysS
gene_biotype: protein_coding
description:
  cysteine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: RPIT_11270
symbol: AQP45302.1
gene_biotype: protein_coding
description:
  23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: RPIT_11275
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: RPIT_11290
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: RPIT_11295
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: RPIT_11300
symbol: AQP45308.1
gene_biotype: protein_coding
description:
  CarD family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11320
symbol: AQP45312.1
gene_biotype: protein_coding
description:
  Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake.


ensembl_gene_id: RPIT_11340
symbol: AQP45316.1
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11370
symbol: AQP45321.1
gene_biotype: protein_coding
description:
  Converts oxaloacetate to phosphoenolpyruvate using ATP as an energy source; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11385
symbol: AQP45324.1
gene_biotype: protein_coding
description:
  Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.


ensembl_gene_id: RPIT_11400
symbol: AQP45326.1
gene_biotype: protein_coding
description:
  Thiamine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11415
symbol: AQP45329.1
gene_biotype: protein_coding
description:
  Phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11440
symbol: AQP45334.1
gene_biotype: protein_coding
description:
  Acetoin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11460
symbol: AQP45338.1
gene_biotype: protein_coding
description:
  Fructose-bisphosphate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11465
symbol: AQP45339.1
gene_biotype: protein_coding
description:
  Lysophospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11470
symbol: AQP45340.1
gene_biotype: protein_coding
description:
  Lipoate--protein ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11475
symbol: AQP45341.1
gene_biotype: protein_coding
description:
  RbsD or FucU transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RbsD / FucU family.


ensembl_gene_id: RPIT_11485
symbol: AQP45343.1
gene_biotype: protein_coding
description:
  Rhamnulokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11500
symbol: AQP46139.1
gene_biotype: protein_coding
description:
  Ribose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: RPIT_11505
symbol: AQP45346.1
gene_biotype: protein_coding
description:
  D-xylose ABC transporter ATP-binding protein; With RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11530
symbol: RPIT_11530
gene_biotype: protein_coding
description:
  ISL3 family transposase; Incomplete; partial on complete genome; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11555
symbol: AQP45354.1
gene_biotype: protein_coding
description:
  Class II fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.


ensembl_gene_id: RPIT_11565
symbol: AQP45356.1
gene_biotype: protein_coding
description:
  rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11585
symbol: AQP45359.1
gene_biotype: protein_coding
description:
  Polyisoprenoid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0312 family.


ensembl_gene_id: RPIT_11595
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: RPIT_11605
symbol: AQP45362.1
gene_biotype: protein_coding
description:
  Murein biosynthesis integral membrane protein MurJ; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: RPIT_11625
symbol: AQP45366.1
gene_biotype: protein_coding
description:
  Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11655
symbol: AQP45371.1
gene_biotype: protein_coding
description:
  FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11695
symbol: AQP45379.1
gene_biotype: protein_coding
description:
  Mannose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11710
symbol: AQP45382.1
gene_biotype: protein_coding
description:
  Small-conductance mechanosensitive ion channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11715
symbol: nadE
gene_biotype: protein_coding
description:
  NAD(+) synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.


ensembl_gene_id: RPIT_11735
symbol: AQP45386.1
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11740
symbol: AQP45387.1
gene_biotype: protein_coding
description:
  Glycine betaine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11750
symbol: AQP45389.1
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11760
symbol: AQP46144.1
gene_biotype: protein_coding
description:
  acyl-CoA desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11765
symbol: AQP45391.1
gene_biotype: protein_coding
description:
  stearoyl-CoA 9-desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11790
symbol: pdxH
gene_biotype: protein_coding
description:
  Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).


ensembl_gene_id: RPIT_11800
symbol: clpB
gene_biotype: protein_coding
description:
  ATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: RPIT_11825
symbol: AQP46145.1
gene_biotype: protein_coding
description:
  beta-N-acetylhexosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.


ensembl_gene_id: RPIT_11830
symbol: AQP45403.1
gene_biotype: protein_coding
description:
  NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11835
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: RPIT_11840
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: RPIT_11845
symbol: AQP45406.1
gene_biotype: protein_coding
description:
  Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11875
symbol: AQP46146.1
gene_biotype: protein_coding
description:
  Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: RPIT_11890
symbol: RPIT_11890
gene_biotype: protein_coding
description:
  Hypothetical protein; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.


ensembl_gene_id: RPIT_11895
symbol: AQP45413.1
gene_biotype: protein_coding
description:
  NAD(P) transhydrogenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11905
symbol: ldh
gene_biotype: protein_coding
description:
  L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.


ensembl_gene_id: RPIT_11915
symbol: AQP45417.1
gene_biotype: protein_coding
description:
  MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_11925
symbol: grpE
gene_biotype: protein_coding
description:
  Nucleotide exchange factor GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds [...]


ensembl_gene_id: RPIT_11940
symbol: AQP45421.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: RPIT_12005
symbol: AQP45434.1
gene_biotype: protein_coding
description:
  Glycosyl hydrolase family 32; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_12030
symbol: gshB
gene_biotype: protein_coding
description:
  Glutathione synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic GSH synthase family.


ensembl_gene_id: RPIT_12040
symbol: AQP45441.1
gene_biotype: protein_coding
description:
  N-formylglutamate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_12105
symbol: AQP45454.1
gene_biotype: protein_coding
description:
  Threonine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_12160
symbol: AQP46148.1
gene_biotype: protein_coding
description:
  Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: RPIT_12165
symbol: AQP45465.1
gene_biotype: protein_coding
description:
  Sulfur transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_12170
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: RPIT_12185
symbol: RPIT_12185
gene_biotype: protein_coding
description:
  dCTP deaminase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_12195
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.


ensembl_gene_id: RPIT_12210
symbol: AQP46149.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0502 family.


ensembl_gene_id: RPIT_12215
symbol: AQP45473.1
gene_biotype: protein_coding
description:
  Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family.


ensembl_gene_id: RPIT_12220
symbol: AQP45474.1
gene_biotype: protein_coding
description:
  Carbohydrate ABC transporter, N-acetylglucosamine/diacetylchitobiose-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_12260
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: RPIT_12265
symbol: AQP45480.1
gene_biotype: protein_coding
description:
  tRNA adenosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_12270
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: RPIT_12280
symbol: menB
gene_biotype: protein_coding
description:
  1,4-dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.


ensembl_gene_id: RPIT_12300
symbol: AQP45486.1
gene_biotype: protein_coding
description:
  Cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: RPIT_12330
symbol: AQP45490.1
gene_biotype: protein_coding
description:
  Pseudouridylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_12390
symbol: nanE
gene_biotype: protein_coding
description:
  N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).


ensembl_gene_id: RPIT_12395
symbol: AQP45503.1
gene_biotype: protein_coding
description:
  Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_12400
symbol: AQP45504.1
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DapA family.


ensembl_gene_id: RPIT_12405
symbol: AQP45505.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: RPIT_12410
symbol: AQP45506.1
gene_biotype: protein_coding
description:
  ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: RPIT_12470
symbol: AQP45515.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_12525
symbol: AQP45526.1
gene_biotype: protein_coding
description:
  Inosose dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_12535
symbol: AQP45528.1
gene_biotype: protein_coding
description:
  5-dehydro-2-deoxygluconokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_12555
symbol: AQP45532.1
gene_biotype: protein_coding
description:
  DNA topoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_12560
symbol: AQP46154.1
gene_biotype: protein_coding
description:
  Glycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycerate kinase type-1 family.


ensembl_gene_id: RPIT_12590
symbol: AQP45538.1
gene_biotype: protein_coding
description:
  methylmalonyl-CoA mutase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_12595
symbol: AQP45539.1
gene_biotype: protein_coding
description:
  methylmalonyl-CoA mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_12625
symbol: rbsK
gene_biotype: protein_coding
description:
  Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: RPIT_12640
symbol: AQP45547.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: RPIT_12645
symbol: AQP45548.1
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: RPIT_12650
symbol: AQP45549.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.


ensembl_gene_id: RPIT_12675
symbol: AQP45553.1
gene_biotype: protein_coding
description:
  ATPase/protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_12700
symbol: AQP45558.1
gene_biotype: protein_coding
description:
  Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SEDS family.


ensembl_gene_id: RPIT_12715
symbol: AQP45561.1
gene_biotype: protein_coding
description:
  Aminodeoxychorismate/anthranilate synthase component II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_12735
symbol: lysS
gene_biotype: protein_coding
description:
  lysine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: RPIT_12755
symbol: AQP45567.1
gene_biotype: protein_coding
description:
  Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_12765
symbol: AQP45569.1
gene_biotype: protein_coding
description:
  NADP-dependent succinic semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_12780
symbol: AQP46158.1
gene_biotype: protein_coding
description:
  NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_12785
symbol: AQP45572.1
gene_biotype: protein_coding
description:
  Quinolinate synthase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: RPIT_12795
symbol: AQP45574.1
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide diphosphorylase (carboxylating); Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NadC/ModD family.


ensembl_gene_id: RPIT_12800
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 2 subfamily.


ensembl_gene_id: RPIT_12830
symbol: AQP45580.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: RPIT_12845
symbol: AQP45583.1
gene_biotype: protein_coding
description:
  N-acylglucosamine 2-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_12920
symbol: AQP45597.1
gene_biotype: protein_coding
description:
  Cytochrome ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_12925
symbol: AQP45598.1
gene_biotype: protein_coding
description:
  Cytochrome d ubiquinol oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_12930
symbol: AQP46161.1
gene_biotype: protein_coding
description:
  Thiol reductant ABC exporter subunit CydD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_12940
symbol: RPIT_12940
gene_biotype: protein_coding
description:
  Thiol reductant ABC exporter subunit CydC; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_12945
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: RPIT_12950
symbol: AQP45601.1
gene_biotype: protein_coding
description:
  Carbonate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_12955
symbol: AQP45602.1
gene_biotype: protein_coding
description:
  Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_12965
symbol: AQP45604.1
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: RPIT_12975
symbol: AQP45605.1
gene_biotype: protein_coding
description:
  Arsenical resistance operon transcriptional repressor ArsD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_12980
symbol: AQP45606.1
gene_biotype: protein_coding
description:
  Arsenical pump-driving ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_12985
symbol: AQP45607.1
gene_biotype: protein_coding
description:
  Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: RPIT_12990
symbol: AQP45608.1
gene_biotype: protein_coding
description:
  Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: RPIT_13000
symbol: AQP45610.1
gene_biotype: protein_coding
description:
  Adenine glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13020
symbol: rlpA
gene_biotype: protein_coding
description:
  Hypothetical protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: RPIT_13025
symbol: AQP45615.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13030
symbol: AQP45616.1
gene_biotype: protein_coding
description:
  Alanine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AlaDH/PNT family.


ensembl_gene_id: RPIT_13065
symbol: hppA
gene_biotype: protein_coding
description:
  Sodium-translocating pyrophosphatase; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force.


ensembl_gene_id: RPIT_13085
symbol: AQP46163.1
gene_biotype: protein_coding
description:
  Peptidoglycan bridge formation protein FemAB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13090
symbol: AQP45627.1
gene_biotype: protein_coding
description:
  Alanine racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13110
symbol: AQP46164.1
gene_biotype: protein_coding
description:
  CCA tRNA nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: RPIT_13120
symbol: AQP45632.1
gene_biotype: protein_coding
description:
  Murein biosynthesis integral membrane protein MurJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13140
symbol: AQP45635.1
gene_biotype: protein_coding
description:
  DNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13145
symbol: glpK-2
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: RPIT_13150
symbol: AQP45637.1
gene_biotype: protein_coding
description:
  Aquaporin family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MIP/aquaporin (TC 1.A.8) family.


ensembl_gene_id: RPIT_13170
symbol: AQP45641.1
gene_biotype: protein_coding
description:
  Zn-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13185
symbol: AQP45644.1
gene_biotype: protein_coding
description:
  Isorenieratene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13190
symbol: AQP45645.1
gene_biotype: protein_coding
description:
  Phytoene synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13195
symbol: AQP45646.1
gene_biotype: protein_coding
description:
  Phytoene dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13200
symbol: idi
gene_biotype: protein_coding
description:
  Isopentenyl-diphosphate delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).


ensembl_gene_id: RPIT_13230
symbol: AQP45652.1
gene_biotype: protein_coding
description:
  Ligand-binding protein SH3; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13245
symbol: AQP45655.1
gene_biotype: protein_coding
description:
  Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13265
symbol: AQP45659.1
gene_biotype: protein_coding
description:
  Alpha-galactosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13280
symbol: AQP45662.1
gene_biotype: protein_coding
description:
  Dolichyl-phosphate beta-glucosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: RPIT_13305
symbol: RPIT_13305
gene_biotype: protein_coding
description:
  Copper amine oxidase; Incomplete; partial on complete genome; missing start and stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13340
symbol: AQP45673.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the fructosamine kinase family.


ensembl_gene_id: RPIT_13370
symbol: AQP46168.1
gene_biotype: protein_coding
description:
  NAD-dependent protein deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13405
symbol: AQP45683.1
gene_biotype: protein_coding
description:
  alpha-L-arabinofuranosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13415
symbol: AQP45685.1
gene_biotype: protein_coding
description:
  NADH:flavin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13425
symbol: AQP45687.1
gene_biotype: protein_coding
description:
  Glyoxalase/bleomycin resistance/dioxygenase family protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: RPIT_13435
symbol: AQP45689.1
gene_biotype: protein_coding
description:
  Glyoxalase/bleomycin resistance/dioxygenase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13465
symbol: AQP45695.1
gene_biotype: protein_coding
description:
  Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13480
symbol: RPIT_13480
gene_biotype: protein_coding
description:
  Diacylglyceryl transferase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13515
symbol: AQP45702.1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: RPIT_13550
symbol: ddl-2
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: RPIT_13565
symbol: AQP45711.1
gene_biotype: protein_coding
description:
  Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family.


ensembl_gene_id: RPIT_13570
symbol: AQP45712.1
gene_biotype: protein_coding
description:
  Chromosome partitioning protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13575
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA (guanine(527)-N(7))-methyltransferase RsmG; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: RPIT_13580
symbol: AQP45714.1
gene_biotype: protein_coding
description:
  Single-stranded DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13585
symbol: AQP45715.1
gene_biotype: protein_coding
description:
  Membrane protein insertase YidC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13590
symbol: AQP45716.1
gene_biotype: protein_coding
description:
  Membrane protein insertion efficiency factor YidD; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: RPIT_13595
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: RPIT_13600
symbol: rpmH
gene_biotype: protein_coding
description:
  50S ribosomal protein L34; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL34 family.


ensembl_gene_id: RPIT_13605
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: RPIT_13610
symbol: AQP46171.1
gene_biotype: protein_coding
description:
  Cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13620
symbol: AQP45720.1
gene_biotype: protein_coding
description:
  CoA-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13635
symbol: AQP45723.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of  [...]


ensembl_gene_id: RPIT_13645
symbol: recF
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydrogenase (decarboxylating); The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: RPIT_13650
symbol: AQP45725.1
gene_biotype: protein_coding
description:
  Cell division protein DedD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13665
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA topoisomerase (ATP-hydrolyzing) subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP [...]


ensembl_gene_id: RPIT_13670
symbol: AQP45728.1
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13700
symbol: nhaA
gene_biotype: protein_coding
description:
  Na+/H+ antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.


ensembl_gene_id: RPIT_13715
symbol: RPIT_13715
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13720
symbol: AQP45733.1
gene_biotype: protein_coding
description:
  NAD-dependent deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13730
symbol: AQP45734.1
gene_biotype: protein_coding
description:
  Ferrous iron transporter B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13760
symbol: AQP45739.1
gene_biotype: protein_coding
description:
  Pyridoxal-5'-phosphate-dependent protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: RPIT_13765
symbol: AQP45740.1
gene_biotype: protein_coding
description:
  UDP-galactose phosphate transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13770
symbol: AQP45741.1
gene_biotype: protein_coding
description:
  Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13775
symbol: AQP45742.1
gene_biotype: protein_coding
description:
  Glycosyltransferase family 1 protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13780
symbol: AQP45743.1
gene_biotype: protein_coding
description:
  GDP-mannose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13795
symbol: AQP45746.1
gene_biotype: protein_coding
description:
  Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13805
symbol: RPIT_13805
gene_biotype: protein_coding
description:
  GNAT family N-acetyltransferase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13870
symbol: AQP45759.1
gene_biotype: protein_coding
description:
  Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13890
symbol: AQP45762.1
gene_biotype: protein_coding
description:
  Deoxycytidylate deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13935
symbol: AQP45768.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family.


ensembl_gene_id: RPIT_13945
symbol: RPIT_13945
gene_biotype: protein_coding
description:
  Sugar transferase; Internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_13980
symbol: AQP46183.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: RPIT_14040
symbol: AQP45783.1
gene_biotype: protein_coding
description:
  Vi polysaccharide biosynthesis protein VipA/TviB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: RPIT_14070
symbol: AQP45789.1
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14090
symbol: AQP45793.1
gene_biotype: protein_coding
description:
  Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.


ensembl_gene_id: RPIT_14115
symbol: AQP45798.1
gene_biotype: protein_coding
description:
  Fused acetyl/propionyl-CoA carboxylase subuit alpha/methylmalonyl-CoA decarboxylase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14125
symbol: AQP45800.1
gene_biotype: protein_coding
description:
  Cadmium-translocating P-type ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14130
symbol: AQP45801.1
gene_biotype: protein_coding
description:
  Heavy metal transport/detoxification protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14140
symbol: AQP45803.1
gene_biotype: protein_coding
description:
  TIGR01777 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14145
symbol: AQP46186.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.


ensembl_gene_id: RPIT_14180
symbol: AQP45809.1
gene_biotype: protein_coding
description:
  Radical SAM/SPASM domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14185
symbol: AQP45810.1
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14190
symbol: AQP45811.1
gene_biotype: protein_coding
description:
  NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14195
symbol: AQP45812.1
gene_biotype: protein_coding
description:
  L-serine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron-sulfur dependent L-serine dehydratase family.


ensembl_gene_id: RPIT_14205
symbol: AQP45813.1
gene_biotype: protein_coding
description:
  Hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14230
symbol: AQP45818.1
gene_biotype: protein_coding
description:
  Secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14260
symbol: AQP45824.1
gene_biotype: protein_coding
description:
  5,10-methylene tetrahydromethanopterin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14280
symbol: AQP45828.1
gene_biotype: protein_coding
description:
  N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha- D-glucopyranoside deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MshB deacetylase family.


ensembl_gene_id: RPIT_14290
symbol: AQP45830.1
gene_biotype: protein_coding
description:
  Band 7 protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14310
symbol: AQP45834.1
gene_biotype: protein_coding
description:
  Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14320
symbol: AQP45836.1
gene_biotype: protein_coding
description:
  Glycogen debranching enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: RPIT_14325
symbol: AQP45837.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate synthase regulatory protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: RPIT_14345
symbol: AQP45841.1
gene_biotype: protein_coding
description:
  Pyruvate, phosphate dikinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: RPIT_14375
symbol: RPIT_14375
gene_biotype: protein_coding
description:
  Hypothetical protein; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.


ensembl_gene_id: RPIT_14380
symbol: AQP45846.1
gene_biotype: protein_coding
description:
  Peroxide stress protein YaaA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0246 family.


ensembl_gene_id: RPIT_14385
symbol: AQP45847.1
gene_biotype: protein_coding
description:
  DNA lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14405
symbol: AQP45851.1
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: RPIT_14420
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: RPIT_14425
symbol: AQP45855.1
gene_biotype: protein_coding
description:
  Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.


ensembl_gene_id: RPIT_14440
symbol: AQP45858.1
gene_biotype: protein_coding
description:
  Luciferase family oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14455
symbol: AQP45860.1
gene_biotype: protein_coding
description:
  Na+/H+ antiporter subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14460
symbol: AQP45861.1
gene_biotype: protein_coding
description:
  Na+/H+ antiporter subunit D; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14465
symbol: AQP45862.1
gene_biotype: protein_coding
description:
  Na(+)/H(+) antiporter subunit C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14470
symbol: AQP45863.1
gene_biotype: protein_coding
description:
  Na+/H+ antiporter subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14510
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: RPIT_14540
symbol: RPIT_14540
gene_biotype: protein_coding
description:
  Arginine deiminase; Catalyzes the degradation of arginine to citruline and ammonia; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14550
symbol: AQP46192.1
gene_biotype: protein_coding
description:
  GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14565
symbol: AQP45879.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: RPIT_14580
symbol: AQP45882.1
gene_biotype: protein_coding
description:
  Sodium:calcium antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14595
symbol: RPIT_14595
gene_biotype: protein_coding
description:
  Tn3 family transposase; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14600
symbol: AQP45885.1
gene_biotype: protein_coding
description:
  Aminoglycoside O-phosphotransferase APH(3'')-Ib; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aminoglycoside phosphotransferase family.


ensembl_gene_id: RPIT_14605
symbol: AQP45886.1
gene_biotype: protein_coding
description:
  Aminoglycoside O-phosphotransferase APH(6)-Id; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14630
symbol: AQP45890.1
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CobQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14645
symbol: AQP45893.1
gene_biotype: protein_coding
description:
  Resolvase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14665
symbol: RPIT_14665
gene_biotype: protein_coding
description:
  Trimethoprim-resistant dihydrofolate reductase DfrA; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: RPIT_14690
symbol: AQP45899.1
gene_biotype: protein_coding
description:
  1,4-beta-xylanase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14715
symbol: RPIT_14715
gene_biotype: protein_coding
description:
  Fused acetyl/propionyl-CoA carboxylase subuit alpha/methylmalonyl-CoA decarboxylase subunit alpha; Incomplete; partial on complete genome; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: RPIT_14720
symbol: AQP45903.1
gene_biotype: protein_coding
description:
  Methionine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: RPIT_14735
symbol: AQP45905.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14740
symbol: xylB
gene_biotype: protein_coding
description:
  Xylulokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14745
symbol: AQP45907.1
gene_biotype: protein_coding
description:
  Xylose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14760
symbol: AQP45909.1
gene_biotype: protein_coding
description:
  Redox-active disulfide protein 2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14780
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: RPIT_14795
symbol: AQP45916.1
gene_biotype: protein_coding
description:
  Heat-shock protein Hsp20; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: RPIT_14800
symbol: AQP45917.1
gene_biotype: protein_coding
description:
  RNA-binding protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14805
symbol: AQP45918.1
gene_biotype: protein_coding
description:
  UDP-glucose 4-epimerase GalE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: RPIT_14820
symbol: AQP45921.1
gene_biotype: protein_coding
description:
  Sodium-independent anion transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14830
symbol: AQP46195.1
gene_biotype: protein_coding
description:
  Hemolysin III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14870
symbol: AQP45928.1
gene_biotype: protein_coding
description:
  Sulfur relay protein DsrC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: RPIT_14880
symbol: AQP45930.1
gene_biotype: protein_coding
description:
  Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


