# geneInfo

ensembl_gene_id: GM3708_1006
symbol: fcl
gene_biotype: protein_coding
description:
  Nucleoside-diphosphate-sugar epimerases; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.


ensembl_gene_id: GM3708_1007
symbol: gmd
gene_biotype: protein_coding
description:
  GDP-D-mannose dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.


ensembl_gene_id: GM3708_1014
symbol: BAQ60608.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: GM3708_1018
symbol: cobD
gene_biotype: protein_coding
description:
  Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: GM3708_102
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl-tRNA(Asn) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: GM3708_1039
symbol: BAQ60633.1
gene_biotype: protein_coding
description:
  Protoporphyrin IX Mg-chelatase subunit D; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.


ensembl_gene_id: GM3708_1066
symbol: glmU
gene_biotype: protein_coding
description:
  N-acetylglucosamine-1-phosphate uridyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: GM3708_1068
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: GM3708_1090
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: GM3708_1095
symbol: ndhA
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase chain 1; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: GM3708_1102
symbol: recA
gene_biotype: protein_coding
description:
  RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: GM3708_1107
symbol: BAQ60701.1
gene_biotype: protein_coding
description:
  Cyanobacteria-specific RpoD-like sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: GM3708_111
symbol: BAQ59706.1
gene_biotype: protein_coding
description:
  Light-dependent protochlorophyllide reductase; Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide).


ensembl_gene_id: GM3708_1114
symbol: BAQ60708.1
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CobG; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: GM3708_1116
symbol: argJ
gene_biotype: protein_coding
description:
  Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: GM3708_1117
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor 3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: GM3708_1118
symbol: BAQ60712.1
gene_biotype: protein_coding
description:
  High-affinity branched-chain amino acid transport system permease protein LivH; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: GM3708_1133
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: GM3708_1134
symbol: BAQ60728.1
gene_biotype: protein_coding
description:
  23S rRNA (guanosine-2'-O-) -methyltransferase rlmB; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: GM3708_1142
symbol: BAQ60736.1
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: GM3708_1148
symbol: BAQ60742.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.


ensembl_gene_id: GM3708_1149
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: GM3708_115
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: GM3708_1152
symbol: BAQ60746.1
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase E; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: GM3708_1155
symbol: BAQ60749.1
gene_biotype: protein_coding
description:
  Assimilatory nitrate reductase large subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.


ensembl_gene_id: GM3708_1168
symbol: BAQ60762.1
gene_biotype: protein_coding
description:
  Maltose/maltodextrin transport ATP-binding protein MalK; Belongs to the ABC transporter superfamily.


ensembl_gene_id: GM3708_1169
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: GM3708_1173
symbol: BAQ60767.1
gene_biotype: protein_coding
description:
  Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake.


ensembl_gene_id: GM3708_1184
symbol: pcm
gene_biotype: protein_coding
description:
  protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.


ensembl_gene_id: GM3708_1190
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome partition protein smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: GM3708_1191
symbol: rplT
gene_biotype: protein_coding
description:
  LSU ribosomal protein L20p; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: GM3708_1193
symbol: rpsJ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S10p; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: GM3708_1194
symbol: tuf
gene_biotype: protein_coding
description:
  Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: GM3708_1195
symbol: fusA
gene_biotype: protein_coding
description:
  Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]


ensembl_gene_id: GM3708_1197
symbol: rpsG
gene_biotype: protein_coding
description:
  SSU ribosomal protein S7p; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: GM3708_1198
symbol: rpsL
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12p; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: GM3708_1199
symbol: BAQ60793.1
gene_biotype: protein_coding
description:
  Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: GM3708_1202
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl-tRNA(Asn) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: GM3708_1210
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: GM3708_1211
symbol: BAQ60805.1
gene_biotype: protein_coding
description:
  Photosystem II protein PsbZ; Controls the interaction of photosystem II (PSII) cores with the light-harvesting antenna.


ensembl_gene_id: GM3708_1229
symbol: cas1
gene_biotype: protein_coding
description:
  CRISPR-associated RecB family exonuclease Cas4; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: GM3708_1230
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: GM3708_1232
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: GM3708_1236
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia.


ensembl_gene_id: GM3708_1242
symbol: BAQ60836.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoaB; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.


ensembl_gene_id: GM3708_1252
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: GM3708_1257
symbol: pcxA
gene_biotype: protein_coding
description:
  Membrane protein PxcA; Involved in light-induced Na(+)-dependent proton extrusion. Also seems to be involved in CO(2) transport; Belongs to the CemA family.


ensembl_gene_id: GM3708_1262
symbol: nadE
gene_biotype: protein_coding
description:
  nAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: GM3708_1266
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: GM3708_1269
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.


ensembl_gene_id: GM3708_1270
symbol: psaI
gene_biotype: protein_coding
description:
  Photosystem I subunit VIII PsaI; May help in the organization of the PsaL subunit. Belongs to the PsaI family.


ensembl_gene_id: GM3708_1272
symbol: BAQ60866.1
gene_biotype: protein_coding
description:
  Type III restriction-modification system methylation subunit; Belongs to the N(4)/N(6)-methyltransferase family.


ensembl_gene_id: GM3708_1280
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: GM3708_1284
symbol: BAQ60878.1
gene_biotype: protein_coding
description:
  uroporphyrinogen-III methyltransferase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: GM3708_1288
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: GM3708_1289
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: GM3708_1295
symbol: ndhB
gene_biotype: protein_coding
description:
  NAD(P)H-plastoquinone oxidoreductase chain 2; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.


ensembl_gene_id: GM3708_1296
symbol: queG
gene_biotype: protein_coding
description:
  Epoxyqueuosine (oQ) reductase QueG; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family.


ensembl_gene_id: GM3708_1299
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: GM3708_1331
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: GM3708_1339
symbol: ndhI
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase chain I; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient; Belongs to the complex I 23 kDa subunit family.


ensembl_gene_id: GM3708_1340
symbol: BAQ60934.1
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase chain J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I subunit 6 family.


ensembl_gene_id: GM3708_1341
symbol: ndhE
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit 4L; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.


ensembl_gene_id: GM3708_1348
symbol: efp
gene_biotype: protein_coding
description:
  Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: GM3708_1349
symbol: BAQ60943.1
gene_biotype: protein_coding
description:
  Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: GM3708_1354
symbol: BAQ60948.1
gene_biotype: protein_coding
description:
  Sulfate transport system permease protein CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: GM3708_1361
symbol: BAQ60955.1
gene_biotype: protein_coding
description:
  RNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: GM3708_1364
symbol: sigA
gene_biotype: protein_coding
description:
  Group 2 RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: GM3708_1379
symbol: ldh
gene_biotype: protein_coding
description:
  L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.


ensembl_gene_id: GM3708_1380
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12p Asp88 (E. coli) methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: GM3708_1382
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA-i(6)A37 methylthiotransferase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: GM3708_1384
symbol: psbD
gene_biotype: protein_coding
description:
  Photosystem II protein D2 PsbD; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors. D2 is needed for assembly of a stable PSII complex.


ensembl_gene_id: GM3708_1388
symbol: sepF
gene_biotype: protein_coding
description:
  CBSS-74546.3.peg.720: hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: GM3708_1389
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: GM3708_1390
symbol: BAQ60984.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: GM3708_1393
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: GM3708_1395
symbol: BAQ60989.1
gene_biotype: protein_coding
description:
  trkA-N:Sodium/hydrogen exchanger; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: GM3708_1400
symbol: ureG
gene_biotype: protein_coding
description:
  Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.


ensembl_gene_id: GM3708_1401
symbol: BAQ60995.1
gene_biotype: protein_coding
description:
  50S ribosomal subunit maturation GTPase RbgA; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: GM3708_1409
symbol: BAQ61003.1
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: GM3708_1413
symbol: fcl-2
gene_biotype: protein_coding
description:
  GDP-L-fucose synthetase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.


ensembl_gene_id: GM3708_1419
symbol: ftsH
gene_biotype: protein_coding
description:
  Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: GM3708_142
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoate synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: GM3708_1426
symbol: ahcY
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: GM3708_143
symbol: plsY
gene_biotype: protein_coding
description:
  Acyl-phosphate:glycerol-3-phosphate O-acyltransferase PlsY; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: GM3708_1447
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: GM3708_145
symbol: BAQ59740.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: GM3708_1463
symbol: petB
gene_biotype: protein_coding
description:
  Cytochrome b6-f complex subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.


ensembl_gene_id: GM3708_1464
symbol: petD
gene_biotype: protein_coding
description:
  Cytochrome b6-f complex subunit IV; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.


ensembl_gene_id: GM3708_147
symbol: ndhD
gene_biotype: protein_coding
description:
  NADH dehydrogenase I subunit 4; NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4 family.


ensembl_gene_id: GM3708_1476
symbol: BAQ61070.1
gene_biotype: protein_coding
description:
  Phycobilisome phycoerythrin-associated linker polypeptide; Belongs to the phycobilisome linker protein family.


ensembl_gene_id: GM3708_1488
symbol: BAQ61082.1
gene_biotype: protein_coding
description:
  Phycobilisome phycoerythrin-associated linker polypeptide CpeE; Belongs to the phycobilisome linker protein family.


ensembl_gene_id: GM3708_1493
symbol: cpcS
gene_biotype: protein_coding
description:
  Phycoerythrin linker protein CpeS homolog; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.


ensembl_gene_id: GM3708_1498
symbol: pebB
gene_biotype: protein_coding
description:
  Phycoerythrobilin:ferredoxin oxidoreductase PebB; Catalyzes the two-electron reduction of the C2 and C3(1) diene system of 15,16-dihydrobiliverdin; Belongs to the HY2 family.


ensembl_gene_id: GM3708_150
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family.


ensembl_gene_id: GM3708_1502
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding and nucleic acid-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: GM3708_1509
symbol: cbbL
gene_biotype: protein_coding
description:
  Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site.


ensembl_gene_id: GM3708_1514
symbol: nadK
gene_biotype: protein_coding
description:
  NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: GM3708_1522
symbol: acsA
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: GM3708_1526
symbol: BAQ61120.1
gene_biotype: protein_coding
description:
  Nucleoside 5-triphosphatase RdgB; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: GM3708_1534
symbol: BAQ61128.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: GM3708_1580
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine46-N7-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: GM3708_1581
symbol: pcyA
gene_biotype: protein_coding
description:
  Phycocyanobilin:ferredoxin oxidoreductase PcyA; Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin. Belongs to the HY2 family.


ensembl_gene_id: GM3708_1582
symbol: tatA
gene_biotype: protein_coding
description:
  Twin-arginine translocation protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: GM3708_1583
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: GM3708_1589
symbol: coaX
gene_biotype: protein_coding
description:
  Pantothenate kinase type III; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: GM3708_1590
symbol: plqA
gene_biotype: protein_coding
description:
  4-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of plastoquinone-9 (PQ-9) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 4-hydroxy-3-solanesylbenzoate. Belongs to the UbiA prenyltransferase family.


ensembl_gene_id: GM3708_16
symbol: cofH
gene_biotype: protein_coding
description:
  7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 2; Catalyzes the radical-mediated synthesis of 5-amino-5-(4- hydroxybenzyl)-6-(D-ribitylimino)-5,6-dihydrouracil from 5-amino-6-(D- ribitylamino)uracil and L-tyrosine.


ensembl_gene_id: GM3708_160
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: GM3708_1618
symbol: BAQ61212.1
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: GM3708_1620
symbol: BAQ61214.1
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: GM3708_1631
symbol: rpoC2
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase delta (beta'') subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the RNA polymerase beta' chain family. RpoC2 subfamily.


ensembl_gene_id: GM3708_1632
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: GM3708_1642
symbol: clpS
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease adaptor protein ClpS Cyano2; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: GM3708_1661
symbol: BAQ61255.1
gene_biotype: protein_coding
description:
  Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...]


ensembl_gene_id: GM3708_167
symbol: chlB
gene_biotype: protein_coding
description:
  Light-independent protochlorophyllide reductase subunit B; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex.


ensembl_gene_id: GM3708_1674
symbol: psbC
gene_biotype: protein_coding
description:
  Photosystem II CP43 protein PsbC; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbC subfamily.


ensembl_gene_id: GM3708_1680
symbol: BAQ61274.1
gene_biotype: protein_coding
description:
  23S rRNA (guanine-N-2-) -methyltransferase rlmL EC 2.1.1.-); Belongs to the methyltransferase superfamily.


ensembl_gene_id: GM3708_1687
symbol: BAQ61281.1
gene_biotype: protein_coding
description:
  RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: GM3708_1690
symbol: kptA
gene_biotype: protein_coding
description:
  RNA:NAD 2'-phosphotransferase; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.


ensembl_gene_id: GM3708_1691
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: GM3708_1692
symbol: bioD
gene_biotype: protein_coding
description:
  Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: GM3708_1697
symbol: BAQ61291.1
gene_biotype: protein_coding
description:
  TRAP transporter solute receptor; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.


ensembl_gene_id: GM3708_170
symbol: BAQ59765.1
gene_biotype: protein_coding
description:
  Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: GM3708_1701
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist in  [...]


ensembl_gene_id: GM3708_1702
symbol: mtnB
gene_biotype: protein_coding
description:
  Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). Belongs to the aldolase class II family. MtnB subfamily.


ensembl_gene_id: GM3708_1703
symbol: mtnD
gene_biotype: protein_coding
description:
  1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway.


ensembl_gene_id: GM3708_1704
symbol: mtnC
gene_biotype: protein_coding
description:
  2,3-diketo-5-methylthiopentyl-1-phosphate enolase-phosphatase; Bifunctional enzyme that catalyzes the enolization of 2,3- diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK- MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene). Belongs to the HAD-like hydrolase superfamily. MasA/MtnC family.


ensembl_gene_id: GM3708_1709
symbol: BAQ61303.1
gene_biotype: protein_coding
description:
  Cyanophycinase; Exopeptidase that catalyzes the hydrolytic cleavage of multi- L-arginyl-poly-L-aspartic acid (cyanophycin; a water-insoluble reserve polymer) into aspartate-arginine dipeptides.


ensembl_gene_id: GM3708_1710
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (Guanine37-N1) -methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: GM3708_1714
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarate hydratase class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: GM3708_173
symbol: cynS
gene_biotype: protein_coding
description:
  Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.


ensembl_gene_id: GM3708_1740
symbol: rplU
gene_biotype: protein_coding
description:
  LSU ribosomal protein L21p; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: GM3708_1743
symbol: menD
gene_biotype: protein_coding
description:
  2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily.


ensembl_gene_id: GM3708_1745
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: GM3708_1746
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate transport ATP-binding protein PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: GM3708_1748
symbol: BAQ61342.1
gene_biotype: protein_coding
description:
  Phosphate transport system permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: GM3708_1751
symbol: BAQ61345.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: GM3708_1752
symbol: rimP
gene_biotype: protein_coding
description:
  Clustered with transcription termination protein NusA; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: GM3708_1753
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription termination protein NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: GM3708_1755
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor 2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: GM3708_1758
symbol: BAQ61352.1
gene_biotype: protein_coding
description:
  Leader peptidase (Prepilin peptidase); Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: GM3708_1759
symbol: BAQ61353.1
gene_biotype: protein_coding
description:
  FO 2-phospho-L-lactate transferase like; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.


ensembl_gene_id: GM3708_1767
symbol: BAQ61361.1
gene_biotype: protein_coding
description:
  Flavodoxin 1; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family.


ensembl_gene_id: GM3708_177
symbol: BAQ59772.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: GM3708_1772
symbol: purU
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).


ensembl_gene_id: GM3708_178
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: GM3708_1780
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase alpha chain; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: GM3708_1794
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: GM3708_1805
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: GM3708_1821
symbol: surE
gene_biotype: protein_coding
description:
  5-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: GM3708_183
symbol: BAQ59778.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: GM3708_1837
symbol: ureD
gene_biotype: protein_coding
description:
  Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: GM3708_1843
symbol: BAQ61437.1
gene_biotype: protein_coding
description:
  DNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: GM3708_1856
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: GM3708_186
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: GM3708_1886
symbol: queF
gene_biotype: protein_coding
description:
  NADPH dependent preQ0 reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.


ensembl_gene_id: GM3708_1887
symbol: tig
gene_biotype: protein_coding
description:
  Cell division trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: GM3708_1890
symbol: rlmN
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: GM3708_1891
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: GM3708_190
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: GM3708_1900
symbol: ndhN
gene_biotype: protein_coding
description:
  Putative subunit of NAD(P)H:quinone oxidoreductase; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.


ensembl_gene_id: GM3708_1905
symbol: aat
gene_biotype: protein_coding
description:
  leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: GM3708_1906
symbol: rsmI
gene_biotype: protein_coding
description:
  rRNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: GM3708_1907
symbol: BAQ61501.1
gene_biotype: protein_coding
description:
  NAD-dependent glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: GM3708_1911
symbol: BAQ61505.1
gene_biotype: protein_coding
description:
  Cytosolic Fe-S cluster assembling factor NBP35; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: GM3708_1912
symbol: rodA
gene_biotype: protein_coding
description:
  Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: GM3708_1937
symbol: BAQ61531.1
gene_biotype: protein_coding
description:
  CRISPR-associated RecB family exonuclease Cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.


ensembl_gene_id: GM3708_1939
symbol: cas1-2
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: GM3708_1943
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: GM3708_1953
symbol: mobA
gene_biotype: protein_coding
description:
  Molybdopterin-guanine dinucleotide biosynthesis protein MobA; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.


ensembl_gene_id: GM3708_1957
symbol: gloB
gene_biotype: protein_coding
description:
  Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.


ensembl_gene_id: GM3708_1963
symbol: groS
gene_biotype: protein_coding
description:
  Heat shock protein 60 family co-chaperone GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: GM3708_1964
symbol: groL
gene_biotype: protein_coding
description:
  Heat shock protein 60 family chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: GM3708_1970
symbol: rsmA
gene_biotype: protein_coding
description:
  SSU rRNA (adenine(1518)-N(6)/adenine(1519)-N(6)) -dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: GM3708_1975
symbol: dapL
gene_biotype: protein_coding
description:
  L,L-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate.


ensembl_gene_id: GM3708_1979
symbol: ppc
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.


ensembl_gene_id: GM3708_1983
symbol: secA
gene_biotype: protein_coding
description:
  Protein export cytoplasm protein SecA ATPase RNA helicase; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: GM3708_2001
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: GM3708_2004
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosomal silencing factor RsfA; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: GM3708_2010
symbol: BAQ61604.1
gene_biotype: protein_coding
description:
  Biotin carboxylase of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: GM3708_2014
symbol: obg
gene_biotype: protein_coding
description:
  GTP-binding protein Obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: GM3708_2018
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: GM3708_2046
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: GM3708_205
symbol: BAQ59799.1
gene_biotype: protein_coding
description:
  1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: GM3708_2059
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: GM3708_208
symbol: murQ
gene_biotype: protein_coding
description:
  N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.


ensembl_gene_id: GM3708_2086
symbol: mutS2
gene_biotype: protein_coding
description:
  Recombination inhibitory protein MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: GM3708_2098
symbol: ndhL
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit NdhL; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.


ensembl_gene_id: GM3708_2100
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: GM3708_2105
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: GM3708_2120
symbol: dacA
gene_biotype: protein_coding
description:
  Diadenylate cyclase spyDAC; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria; Belongs to the adenylate cyclase family. DacA/CdaA subfamily.


ensembl_gene_id: GM3708_2121
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: GM3708_2159
symbol: hpf
gene_biotype: protein_coding
description:
  Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: GM3708_2164
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: GM3708_2172
symbol: BAQ61766.1
gene_biotype: protein_coding
description:
  Folate-dependent protein for Fe/S cluster synthesis/repair in oxidative stress; Belongs to the GcvT family.


ensembl_gene_id: GM3708_2177
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamin-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: GM3708_222
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: GM3708_2253
symbol: BAQ61847.1
gene_biotype: protein_coding
description:
  Calcium/proton exchanger; Ca(+)/H(+) antiporter that extrudes calcium in exchange for external protons.


ensembl_gene_id: GM3708_2255
symbol: cysH
gene_biotype: protein_coding
description:
  Phosphoadenylyl-sulfate reductase [thioredoxin]; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.


ensembl_gene_id: GM3708_2260
symbol: ispG
gene_biotype: protein_coding
description:
  1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: GM3708_2272
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: GM3708_2278
symbol: hemF
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Involved in the heme and chlorophyll biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen-IX.


ensembl_gene_id: GM3708_2292
symbol: psbA
gene_biotype: protein_coding
description:
  Photosystem II protein D1 PsbA; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.


ensembl_gene_id: GM3708_2295
symbol: BAQ61889.1
gene_biotype: protein_coding
description:
  Probable RND efflux membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: GM3708_2302
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: GM3708_2304
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: GM3708_2309
symbol: BAQ61903.1
gene_biotype: protein_coding
description:
  Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.


ensembl_gene_id: GM3708_2310
symbol: BAQ61904.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: GM3708_233
symbol: mnmE
gene_biotype: protein_coding
description:
  GTPase and tRNA-U34 5-formylation enzyme TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: GM3708_2334
symbol: moaC
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: GM3708_2335
symbol: rpsN
gene_biotype: protein_coding
description:
  SSU ribosomal protein S14p; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: GM3708_2338
symbol: rlpA
gene_biotype: protein_coding
description:
  Rare lipoprotein A precursor; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: GM3708_234
symbol: psbY
gene_biotype: protein_coding
description:
  Hypothetical protein; Manganese-binding polypeptide with L-arginine metabolizing enzyme activity. Component of the core of photosystem II. Belongs to the PsbY family.


ensembl_gene_id: GM3708_2340
symbol: minC
gene_biotype: protein_coding
description:
  Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: GM3708_2342
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: GM3708_2343
symbol: thiC
gene_biotype: protein_coding
description:
  Hydroxymethylpyrimidine phosphate synthase ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.


ensembl_gene_id: GM3708_2348
symbol: rplS
gene_biotype: protein_coding
description:
  LSU ribosomal protein L19p; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: GM3708_2349
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: GM3708_2350
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: GM3708_2351
symbol: rplK
gene_biotype: protein_coding
description:
  LSU ribosomal protein L11p; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: GM3708_2352
symbol: rplA
gene_biotype: protein_coding
description:
  LSU ribosomal protein L1p; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: GM3708_2370
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: GM3708_2378
symbol: rpiA
gene_biotype: protein_coding
description:
  Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.


ensembl_gene_id: GM3708_2383
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: GM3708_2387
symbol: BAQ61981.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: GM3708_2388
symbol: pdxA
gene_biotype: protein_coding
description:
  4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).


ensembl_gene_id: GM3708_239
symbol: nanE
gene_biotype: protein_coding
description:
  N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).


ensembl_gene_id: GM3708_2392
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: GM3708_2393
symbol: BAQ61987.1
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: GM3708_2399
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: GM3708_240
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: GM3708_2402
symbol: cofG
gene_biotype: protein_coding
description:
  7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase subunit 1; Catalyzes the radical-mediated synthesis of 7,8-didemethyl-8- hydroxy-5-deazariboflavin (FO) from 5-amino-5-(4-hydroxybenzyl)-6-(D- ribitylimino)-5,6-dihydrouracil.


ensembl_gene_id: GM3708_2404
symbol: BAQ61998.1
gene_biotype: protein_coding
description:
  Ribosomal small subunit pseudouridine synthase A; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: GM3708_2408
symbol: rsmG
gene_biotype: protein_coding
description:
  rRNA small subunit 7-methylguanosine (m7G) methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: GM3708_2411
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: GM3708_2413
symbol: ndhH
gene_biotype: protein_coding
description:
  NAD(P)H-plastoquinone oxidoreductase subunit H; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.


ensembl_gene_id: GM3708_2414
symbol: BAQ62008.1
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: GM3708_2419
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: GM3708_242
symbol: BAQ59836.1
gene_biotype: protein_coding
description:
  Protoporphyrin IX Mg-chelatase subunit I; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.


ensembl_gene_id: GM3708_243
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: GM3708_2439
symbol: rpoC1
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase gamma subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: GM3708_2447
symbol: BAQ62041.1
gene_biotype: protein_coding
description:
  Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: GM3708_2449
symbol: pdhA
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: GM3708_246
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: GM3708_2469
symbol: fusA-2
gene_biotype: protein_coding
description:
  Translation elongation factor G paralog; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF- [...]


ensembl_gene_id: GM3708_2471
symbol: BAQ62065.1
gene_biotype: protein_coding
description:
  Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.


ensembl_gene_id: GM3708_2473
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA-specific 2-thiouridylase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: GM3708_2476
symbol: BAQ62070.1
gene_biotype: protein_coding
description:
  NADPH-dependent glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: GM3708_2483
symbol: BAQ62077.1
gene_biotype: protein_coding
description:
  TsaC protein (YrdC domain) required for threonylcarbamoyladenosine t(6)A37 modification in tRNA; Belongs to the SUA5 family.


ensembl_gene_id: GM3708_2484
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: GM3708_2489
symbol: BAQ62083.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: GM3708_2494
symbol: clpS-2
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: GM3708_25
symbol: GM3708_25
gene_biotype: protein_coding
description:
  Sodium/glutamate symport protein; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family.


ensembl_gene_id: GM3708_2501
symbol: aroA
gene_biotype: protein_coding
description:
  5-Enolpyruvylshikimate-3-phosphate synthase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: GM3708_2502
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: GM3708_2508
symbol: ccsA
gene_biotype: protein_coding
description:
  Cytochrome c-type biogenesis protein CcsA/ResC; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.


ensembl_gene_id: GM3708_2515
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: GM3708_2517
symbol: mtnP
gene_biotype: protein_coding
description:
  5'-methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily.


ensembl_gene_id: GM3708_2521
symbol: cysA
gene_biotype: protein_coding
description:
  Sulfate and thiosulfate import ATP-binding protein CysA; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.


ensembl_gene_id: GM3708_2532
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: GM3708_2551
symbol: BAQ62145.1
gene_biotype: protein_coding
description:
  ABC-type Fe3+-siderophore transport system; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: GM3708_2553
symbol: BAQ62147.1
gene_biotype: protein_coding
description:
  RelB/StbD replicon stabilization protein; Antitoxin component of a type II toxin-antitoxin (TA) system.


ensembl_gene_id: GM3708_2562
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: GM3708_2563
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: GM3708_2565
symbol: BAQ62159.1
gene_biotype: protein_coding
description:
  Molybdopterin biosynthesis protein MoeA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: GM3708_2580
symbol: BAQ62174.1
gene_biotype: protein_coding
description:
  Putative formate dehydrogenase oxidoreductase protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: GM3708_2583
symbol: BAQ62177.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.


ensembl_gene_id: GM3708_2584
symbol: BAQ62178.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: GM3708_2597
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: GM3708_26
symbol: lipB
gene_biotype: protein_coding
description:
  octanoate-[acyl-carrier-protein]-protein-N- octanoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: GM3708_2617
symbol: rsmH
gene_biotype: protein_coding
description:
  rRNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: GM3708_2618
symbol: BAQ62212.1
gene_biotype: protein_coding
description:
  Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.


ensembl_gene_id: GM3708_2620
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: GM3708_2633
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: GM3708_2635
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: GM3708_2639
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: GM3708_2646
symbol: BAQ62240.1
gene_biotype: protein_coding
description:
  Pyruvate formate-lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.


ensembl_gene_id: GM3708_2656
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: GM3708_2660
symbol: BAQ62254.1
gene_biotype: protein_coding
description:
  Phycobilisome small core linker polypeptide; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.


ensembl_gene_id: GM3708_2681
symbol: smpB
gene_biotype: protein_coding
description:
  tmRNA-binding protein SmpB; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switc [...]


ensembl_gene_id: GM3708_2685
symbol: mtnA
gene_biotype: protein_coding
description:
  Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: GM3708_2687
symbol: BAQ62281.1
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: GM3708_269
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: GM3708_2708
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: GM3708_2712
symbol: BAQ62306.1
gene_biotype: protein_coding
description:
  DNA polymerase III beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of  [...]


ensembl_gene_id: GM3708_2713
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: GM3708_2714
symbol: BAQ62308.1
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: GM3708_2727
symbol: BAQ62321.1
gene_biotype: protein_coding
description:
  Fructose-bisphosphate aldolase class II; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.


ensembl_gene_id: GM3708_2728
symbol: mscL
gene_biotype: protein_coding
description:
  Large-conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: GM3708_2731
symbol: prmC
gene_biotype: protein_coding
description:
  protein-N(5)-glutamine methyltransferase PrmC; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: GM3708_2732
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: GM3708_2734
symbol: BAQ62328.1
gene_biotype: protein_coding
description:
  Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: GM3708_2741
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: GM3708_2745
symbol: BAQ62339.1
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: GM3708_275
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: GM3708_2753
symbol: mrnC
gene_biotype: protein_coding
description:
  Ribonuclease III family protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.


ensembl_gene_id: GM3708_2765
symbol: hisZ
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: GM3708_2768
symbol: pepA
gene_biotype: protein_coding
description:
  Cytosol aminopeptidase PepA; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: GM3708_279
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: GM3708_2797
symbol: queE
gene_biotype: protein_coding
description:
  Queuosine biosynthesis QueE Radical SAM; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: GM3708_2798
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle receptor protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: GM3708_28
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: GM3708_2804
symbol: BAQ62398.1
gene_biotype: protein_coding
description:
  5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: GM3708_2805
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: GM3708_2806
symbol: BAQ62400.1
gene_biotype: protein_coding
description:
  Nitrogen assimilation transcriptional activator NtcB; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: GM3708_2807
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 1 subfamily.


ensembl_gene_id: GM3708_2813
symbol: argB
gene_biotype: protein_coding
description:
  Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: GM3708_2815
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: GM3708_2825
symbol: BAQ62419.1
gene_biotype: protein_coding
description:
  cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.


ensembl_gene_id: GM3708_2841
symbol: BAQ62435.1
gene_biotype: protein_coding
description:
  NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.


ensembl_gene_id: GM3708_2843
symbol: BAQ62437.1
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: GM3708_2849
symbol: BAQ62443.1
gene_biotype: protein_coding
description:
  Probable 30S ribosomal protein PSRP-3; Probably a ribosomal protein or a ribosome-associated protein; Belongs to the chloroplast-specific ribosomal protein cS23 family.


ensembl_gene_id: GM3708_2851
symbol: cbiM
gene_biotype: protein_coding
description:
  Substrate-specific component CbiM of cobalt ECF transporter; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.


ensembl_gene_id: GM3708_2852
symbol: cbiN
gene_biotype: protein_coding
description:
  Additional substrate-specific component CbiN of cobalt ECF transporter; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.


ensembl_gene_id: GM3708_286
symbol: hypA
gene_biotype: protein_coding
description:
  [NiFe] hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.


ensembl_gene_id: GM3708_2861
symbol: nusB
gene_biotype: protein_coding
description:
  Transcription termination protein NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: GM3708_2863
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA-specific adenosine-34 deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: GM3708_2897
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: GM3708_2902
symbol: ureE
gene_biotype: protein_coding
description:
  Urease accessory protein UreE; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.


ensembl_gene_id: GM3708_2906
symbol: BAQ62500.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport system permease protein LivM; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: GM3708_2907
symbol: BAQ62501.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: GM3708_2910
symbol: nnrE
gene_biotype: protein_coding
description:
  NAD(P)HX epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epime [...]


ensembl_gene_id: GM3708_2913
symbol: dapB
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: GM3708_2921
symbol: BAQ62515.1
gene_biotype: protein_coding
description:
  ribosomal-protein-S18p-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.


ensembl_gene_id: GM3708_2936
symbol: tatA-2
gene_biotype: protein_coding
description:
  Twin-arginine translocation protein TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: GM3708_2937
symbol: psbH
gene_biotype: protein_coding
description:
  Photosystem II 10 kDa phosphoprotein PsbH; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.


ensembl_gene_id: GM3708_2938
symbol: psbN
gene_biotype: protein_coding
description:
  Photosystem II protein PsbN; May play a role in photosystem I and II biogenesis. Belongs to the PsbN family.


ensembl_gene_id: GM3708_2940
symbol: BAQ62534.1
gene_biotype: protein_coding
description:
  Ferredoxin; Catalytic subunit of the ferredoxin-thioredoxin reductase (FTR), which catalyzes the two-electron reduction of thioredoxins by the electrons provided by reduced ferredoxin.


ensembl_gene_id: GM3708_2965
symbol: tatC
gene_biotype: protein_coding
description:
  Twin-arginine translocation protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.


ensembl_gene_id: GM3708_2970
symbol: psaJ
gene_biotype: protein_coding
description:
  Photosystem I subunit IX PsaJ; May help in the organization of the PsaE and PsaF subunits. Belongs to the PsaJ family.


ensembl_gene_id: GM3708_2972
symbol: tsaD
gene_biotype: protein_coding
description:
  TsaD/Kae1/Qri7 protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: GM3708_2973
symbol: psaB
gene_biotype: protein_coding
description:
  Photosystem I P700 chlorophyll a apoprotein subunit Ib PsaB; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6; Belongs to the PsaA/PsaB family.


ensembl_gene_id: GM3708_2974
symbol: psaA
gene_biotype: protein_coding
description:
  Photosystem I P700 chlorophyll a apoprotein subunit Ia PsaA; PsaA and PsaB bind P700, the primary electron donor of photosystem I (PSI), as well as the electron acceptors A0, A1 and FX. PSI is a plastocyanin/cytochrome c6-ferredoxin oxidoreductase, converting photonic excitation into a charge separation, which transfers an electron from the donor P700 chlorophyll pair to the spectroscopically characterized acceptors A0, A1, FX, FA and FB in turn. Oxidized P700 is reduced on the lumenal side of the thylakoid membrane by plastocyanin or cytochrome c6; Belongs to the PsaA/PsaB family.


ensembl_gene_id: GM3708_2976
symbol: lpxA
gene_biotype: protein_coding
description:
  acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: GM3708_2977
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: GM3708_2979
symbol: rnz
gene_biotype: protein_coding
description:
  Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.


ensembl_gene_id: GM3708_298
symbol: BAQ59892.1
gene_biotype: protein_coding
description:
  Molybdenum transport system permease protein ModB; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: GM3708_2998
symbol: psbX
gene_biotype: protein_coding
description:
  Photosystem II protein PsbX; Involved in the binding and/or turnover of quinones at the Q(B) site of Photosystem II.


ensembl_gene_id: GM3708_3000
symbol: BAQ62594.1
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: GM3708_3020
symbol: selO
gene_biotype: protein_coding
description:
  Selenoprotein O and cysteine-containing homologs; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.


ensembl_gene_id: GM3708_3036
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: GM3708_3048
symbol: BAQ62642.1
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Belongs to the UPF0284 family.


ensembl_gene_id: GM3708_3049
symbol: panD
gene_biotype: protein_coding
description:
  Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: GM3708_3058
symbol: chlL
gene_biotype: protein_coding
description:
  Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein ChlL; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The L component serves as a unique electron donor to the NB-component of the complex, and binds Mg-ATP.


ensembl_gene_id: GM3708_3060
symbol: chlN
gene_biotype: protein_coding
description:
  Light-independent protochlorophyllide reductase subunit N; Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein (ChlN-ChlB) is the catalytic component of the complex.


ensembl_gene_id: GM3708_3066
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate 5-dehydrogenase I alpha; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: GM3708_3071
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: GM3708_3074
symbol: BAQ62668.1
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family.


ensembl_gene_id: GM3708_3087
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: GM3708_3093
symbol: fni
gene_biotype: protein_coding
description:
  Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).


ensembl_gene_id: GM3708_3094
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: GM3708_3095
symbol: BAQ62689.1
gene_biotype: protein_coding
description:
  CRP/FNR family transcriptional regulator, cyclic AMP receptor protein; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.


ensembl_gene_id: GM3708_3100
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: GM3708_3107
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: GM3708_3108
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: GM3708_3109
symbol: rplY
gene_biotype: protein_coding
description:
  LSU ribosomal protein L25p; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: GM3708_312
symbol: BAQ59906.1
gene_biotype: protein_coding
description:
  Ribonucleotide reductase of class Ia; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: GM3708_3123
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: GM3708_3124
symbol: mutM
gene_biotype: protein_coding
description:
  formamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: GM3708_3125
symbol: psaE
gene_biotype: protein_coding
description:
  Photosystem I subunit IV PsaE; Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family.


ensembl_gene_id: GM3708_3135
symbol: ycf4
gene_biotype: protein_coding
description:
  Photosystem I assembly related protein Ycf4; Seems to be required for the assembly of the photosystem I complex; Belongs to the Ycf4 family.


ensembl_gene_id: GM3708_3136
symbol: BAQ62730.1
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: GM3708_3137
symbol: BAQ62731.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: GM3708_3143
symbol: sbcD
gene_biotype: protein_coding
description:
  Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: GM3708_3147
symbol: trmJ
gene_biotype: protein_coding
description:
  tRNA:Cm32/Um32 methyltransferase; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: GM3708_3156
symbol: BAQ62750.1
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: GM3708_3157
symbol: cugP
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanylyltransferase; Catalyzes the formation of UDP-glucose, from UTP and glucose 1-phosphate.


ensembl_gene_id: GM3708_3166
symbol: cobQ
gene_biotype: protein_coding
description:
  Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: GM3708_3169
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: GM3708_3172
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: GM3708_3178
symbol: menG
gene_biotype: protein_coding
description:
  2-heptaprenyl-1,4-naphthoquinone methyltransferase MenG; Methyltransferase required for the conversion of 2-phytyl- 1,4-beta-naphthoquinol to phylloquinol.


ensembl_gene_id: GM3708_3182
symbol: speH
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.


ensembl_gene_id: GM3708_3188
symbol: pdxH
gene_biotype: protein_coding
description:
  Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).


ensembl_gene_id: GM3708_3191
symbol: accA
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A carboxyl transferase alpha chain; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: GM3708_3193
symbol: menA
gene_biotype: protein_coding
description:
  1,4-dihydroxy-2-naphthoate polyprenyltransferase; Involved in the synthesis of phylloquinone (vitamin K1). Catalyzes the transfer of a prenyl chain to 2-carboxy-1,4- naphthoquinone; Belongs to the MenA family. Type 2 subfamily.


ensembl_gene_id: GM3708_3197
symbol: petM
gene_biotype: protein_coding
description:
  Hypothetical protein; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.


ensembl_gene_id: GM3708_3201
symbol: BAQ62795.1
gene_biotype: protein_coding
description:
  Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.


ensembl_gene_id: GM3708_3219
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: GM3708_3223
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: GM3708_3236
symbol: ribBA
gene_biotype: protein_coding
description:
  3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: GM3708_3237
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase [ATP]; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.


ensembl_gene_id: GM3708_3238
symbol: ndhO
gene_biotype: protein_coding
description:
  Pyruvate/2-oxoglutarate dehydrogenase complex; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.


ensembl_gene_id: GM3708_3239
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.


ensembl_gene_id: GM3708_325
symbol: BAQ59919.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: GM3708_3251
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: GM3708_3252
symbol: BAQ62846.1
gene_biotype: protein_coding
description:
  Putative Holliday junction resolvase YggF; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: GM3708_3266
symbol: psbK
gene_biotype: protein_coding
description:
  Photosystem II protein PsbK; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.


ensembl_gene_id: GM3708_3274
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: GM3708_3281
symbol: menB
gene_biotype: protein_coding
description:
  Naphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA).


ensembl_gene_id: GM3708_3283
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: GM3708_3291
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: GM3708_3295
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: GM3708_3299
symbol: BAQ62893.1
gene_biotype: protein_coding
description:
  Superoxide dismutase [Fe]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: GM3708_33
symbol: ycf3
gene_biotype: protein_coding
description:
  Photosystem I assembly related protein Ycf3; Seems to be required for the assembly of the photosystem I complex; Belongs to the Ycf3 family.


ensembl_gene_id: GM3708_330
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: GM3708_3301
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: GM3708_3318
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: GM3708_332
symbol: aqpZ
gene_biotype: protein_coding
description:
  Aquaporin Z; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family.


ensembl_gene_id: GM3708_3322
symbol: BAQ62916.1
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: GM3708_3325
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.


ensembl_gene_id: GM3708_3328
symbol: BAQ62922.1
gene_biotype: protein_coding
description:
  S-(hydroxymethyl)glutathione dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.


ensembl_gene_id: GM3708_3334
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: GM3708_334
symbol: BAQ59928.1
gene_biotype: protein_coding
description:
  Protein YidD; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: GM3708_3349
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: GM3708_3351
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: GM3708_3352
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase delta chain; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: GM3708_3353
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase F0 sector subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: GM3708_3354
symbol: atpG-2
gene_biotype: protein_coding
description:
  ATP synthase B' chain; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). The b'-subunit is a diverged and duplicated form of b found in plants and photosynthetic bacteria. Belongs to the ATPase B chain family.


ensembl_gene_id: GM3708_3355
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0 sector subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: GM3708_3356
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0 sector subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: GM3708_3367
symbol: accD
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A carboxyl transferase beta chain; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: GM3708_3371
symbol: purE
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: GM3708_3375
symbol: gcvP
gene_biotype: protein_coding
description:
  Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.


ensembl_gene_id: GM3708_3376
symbol: BAQ62970.1
gene_biotype: protein_coding
description:
  Group 2 RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: GM3708_338
symbol: murJ
gene_biotype: protein_coding
description:
  Proposed peptidoglycan lipid II flippase MurJ; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: GM3708_3393
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: GM3708_3395
symbol: folD
gene_biotype: protein_coding
description:
  Methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: GM3708_3396
symbol: rpsD
gene_biotype: protein_coding
description:
  SSU ribosomal protein S4p; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: GM3708_3404
symbol: psbJ
gene_biotype: protein_coding
description:
  Photosystem II protein PsbJ; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.


ensembl_gene_id: GM3708_3405
symbol: psbL
gene_biotype: protein_coding
description:
  Photosystem II protein PsbL; One of the components of the core complex of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. This subunit is found at the monomer-monomer interface and is required for correct PSII assembly and/or dimerization.


ensembl_gene_id: GM3708_3406
symbol: psbF
gene_biotype: protein_coding
description:
  Cytochrome b559 beta chain; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family.


ensembl_gene_id: GM3708_3407
symbol: psbE
gene_biotype: protein_coding
description:
  Cytochrome b559 alpha chain; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.


ensembl_gene_id: GM3708_3408
symbol: BAQ63002.1
gene_biotype: protein_coding
description:
  Photosystem II stability/assembly factor HCF136/Ycf48; Unknown. The ortholog in A.thaliana is involved in photosystem II (PSII) assembly, but knockout of the corresponding gene in Synechoccus PCC 7002 has no effect on PSII activity.


ensembl_gene_id: GM3708_3414
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: GM3708_3419
symbol: BAQ63013.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: GM3708_342
symbol: BAQ59936.1
gene_biotype: protein_coding
description:
  SOS-response repressor and protease LexA; Represses a number of genes involved in the response to DNA damage (SOS response).


ensembl_gene_id: GM3708_3420
symbol: gpmI
gene_biotype: protein_coding
description:
  2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: GM3708_3421
symbol: BAQ63015.1
gene_biotype: protein_coding
description:
  Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.


ensembl_gene_id: GM3708_3424
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: GM3708_3436
symbol: clpB
gene_biotype: protein_coding
description:
  ClpB protein; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: GM3708_3444
symbol: secF
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecF subfamily.


ensembl_gene_id: GM3708_3445
symbol: secD
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.


ensembl_gene_id: GM3708_3446
symbol: BAQ63040.1
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 component beta subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.


ensembl_gene_id: GM3708_3458
symbol: BAQ63052.1
gene_biotype: protein_coding
description:
  Pro-zeta-carotene desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.


ensembl_gene_id: GM3708_3459
symbol: BAQ63053.1
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: GM3708_3460
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: GM3708_3462
symbol: tgt
gene_biotype: protein_coding
description:
  tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...]


ensembl_gene_id: GM3708_3466
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome small subunit-stimulated GTPase EngC; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: GM3708_3468
symbol: dnaJ
gene_biotype: protein_coding
description:
  Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]


ensembl_gene_id: GM3708_3474
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: GM3708_3481
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: GM3708_3486
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: GM3708_349
symbol: ruvC
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: GM3708_3500
symbol: cbiA
gene_biotype: protein_coding
description:
  Cobyrinic acid A,C-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: GM3708_352
symbol: BAQ59946.1
gene_biotype: protein_coding
description:
  Circadian clock protein KaiA; Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of kaiC. In contrast, the presence of kaiB in the complex decreases the phosphorylation status of kaiC, suggesting that kaiB acts by antagonizing the interaction between kaiA and kaiC. A kaiA dimer is sufficient to enhance kaiC he [...]


ensembl_gene_id: GM3708_353
symbol: kaiB
gene_biotype: protein_coding
description:
  Circadian oscillation regulator KaiB; Component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The KaiABC complex may act as a promoter-non-specific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it decreases the phosphorylation status of KaiC. It has no effect on KaiC by itself, but instead needs the presence of both KaiA and KaiC, suggesting that it acts by antagonizing the interaction between KaiA and KaiC; Belongs to the KaiB family.


ensembl_gene_id: GM3708_354
symbol: kaiC
gene_biotype: protein_coding
description:
  Circadian clock protein KaiC; Core component of the KaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. Binds to DNA. The KaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction; Belongs to the KaiC family.


ensembl_gene_id: GM3708_363
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: GM3708_376
symbol: anmK
gene_biotype: protein_coding
description:
  anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.


ensembl_gene_id: GM3708_378
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: GM3708_392
symbol: BAQ59986.1
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.


ensembl_gene_id: GM3708_397
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: GM3708_405
symbol: kdpA
gene_biotype: protein_coding
description:
  Potassium-transporting ATPase A chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane.


ensembl_gene_id: GM3708_407
symbol: kdpB
gene_biotype: protein_coding
description:
  Potassium-transporting ATPase B chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily.


ensembl_gene_id: GM3708_41
symbol: nrdR
gene_biotype: protein_coding
description:
  Ribonucleotide reductase transcriptional regulator NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: GM3708_410
symbol: kdpC
gene_biotype: protein_coding
description:
  Potassium-transporting ATPase C chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.


ensembl_gene_id: GM3708_42
symbol: psbB
gene_biotype: protein_coding
description:
  Photosystem II CP47 protein PsbB; One of the components of the core complex of photosystem II (PSII). It binds chlorophyll and helps catalyze the primary light- induced photochemical processes of PSII. PSII is a light-driven water:plastoquinone oxidoreductase, using light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation; Belongs to the PsbB/PsbC family. PsbB subfamily.


ensembl_gene_id: GM3708_440
symbol: BAQ60034.1
gene_biotype: protein_coding
description:
  Proton/glutamate symport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: GM3708_46
symbol: rpsO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S15p; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: GM3708_467
symbol: BAQ60061.1
gene_biotype: protein_coding
description:
  5-methyltetrahydrofolate--homocysteine methyltransferase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.


ensembl_gene_id: GM3708_484
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: GM3708_486
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: GM3708_487
symbol: BAQ60081.1
gene_biotype: protein_coding
description:
  Ribonucleotide reductase of class Ia; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.


ensembl_gene_id: GM3708_488
symbol: BAQ60082.1
gene_biotype: protein_coding
description:
  Cobalt-zinc-cadmium resistance protein CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: GM3708_490
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan (glycogen) branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: GM3708_50
symbol: recF
gene_biotype: protein_coding
description:
  DNA recombination and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: GM3708_500
symbol: queC
gene_biotype: protein_coding
description:
  Queuosine biosynthesis QueC ATPase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: GM3708_507
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: GM3708_523
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: GM3708_531
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: GM3708_533
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: GM3708_547
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: GM3708_55
symbol: GM3708_55
gene_biotype: protein_coding
description:
  Peroxiredoxin family protein/glutaredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Prx5 subfamily.


ensembl_gene_id: GM3708_553
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: GM3708_560
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: GM3708_567
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: GM3708_573
symbol: petG
gene_biotype: protein_coding
description:
  Cytochrome b6-f complex subunit V; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. PetG is required for either the stability or assembly of the cytochrome b6-f complex.


ensembl_gene_id: GM3708_585
symbol: acsF
gene_biotype: protein_coding
description:
  Mg protoporphyrin IX monomethyl ester oxidative cyclase; Catalyzes the formation of the isocyclic ring in chlorophyll biosynthesis. Mediates the cyclase reaction, which results in the formation of divinylprotochlorophyllide (Pchlide) characteristic of all chlorophylls from magnesium-protoporphyrin IX 13-monomethyl ester (MgPMME); Belongs to the AcsF family.


ensembl_gene_id: GM3708_595
symbol: BAQ60189.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase iron-sulfur protein; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.


ensembl_gene_id: GM3708_597
symbol: BAQ60191.1
gene_biotype: protein_coding
description:
  tRNA (cytidine(34)-2'-O)-methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: GM3708_6
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]


ensembl_gene_id: GM3708_60
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: GM3708_61
symbol: cbiD
gene_biotype: protein_coding
description:
  Cobalt-precorrin-6 synthase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.


ensembl_gene_id: GM3708_612
symbol: ndhC
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase subunit 3; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.


ensembl_gene_id: GM3708_613
symbol: ndhK
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase chain K; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration; Belongs to the complex I 20 kDa subunit family.


ensembl_gene_id: GM3708_614
symbol: ndhJ
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase chain J; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.


ensembl_gene_id: GM3708_617
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: GM3708_622
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: GM3708_63
symbol: lspA
gene_biotype: protein_coding
description:
  Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: GM3708_630
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: GM3708_640
symbol: BAQ60234.1
gene_biotype: protein_coding
description:
  Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: GM3708_645
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: GM3708_65
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: GM3708_657
symbol: psbI
gene_biotype: protein_coding
description:
  Photosystem II protein PsbI; One of the components of the core complex of photosystem II (PSII), required for its stability and/or assembly. PSII is a light- driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation.


ensembl_gene_id: GM3708_658
symbol: pyrR
gene_biotype: protein_coding
description:
  Phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.


ensembl_gene_id: GM3708_668
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: GM3708_671
symbol: rpsR
gene_biotype: protein_coding
description:
  SSU ribosomal protein S18p; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: GM3708_681
symbol: argD
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: GM3708_682
symbol: mntP
gene_biotype: protein_coding
description:
  Hypothetical protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.


ensembl_gene_id: GM3708_695
symbol: BAQ60289.1
gene_biotype: protein_coding
description:
  tRNA dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily.


ensembl_gene_id: GM3708_696
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: GM3708_706
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: GM3708_71
symbol: proA
gene_biotype: protein_coding
description:
  Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: GM3708_710
symbol: BAQ60304.1
gene_biotype: protein_coding
description:
  Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.


ensembl_gene_id: GM3708_711
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: GM3708_712
symbol: hemC
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: GM3708_713
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: GM3708_717
symbol: BAQ60311.1
gene_biotype: protein_coding
description:
  Uncharacterized monothiol glutaredoxin ycf64-like; Belongs to the glutaredoxin family. Monothiol subfamily.


ensembl_gene_id: GM3708_726
symbol: rpmE
gene_biotype: protein_coding
description:
  LSU ribosomal protein L31p; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.


ensembl_gene_id: GM3708_728
symbol: rplM
gene_biotype: protein_coding
description:
  LSU ribosomal protein L13p; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: GM3708_729
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: GM3708_731
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: GM3708_732
symbol: rpsK
gene_biotype: protein_coding
description:
  SSU ribosomal protein S11p; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: GM3708_733
symbol: rpsM
gene_biotype: protein_coding
description:
  SSU ribosomal protein S13p; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: GM3708_734
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor 1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: GM3708_736
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase secY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: GM3708_737
symbol: rplO
gene_biotype: protein_coding
description:
  LSU ribosomal protein L15p; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: GM3708_738
symbol: rpsE
gene_biotype: protein_coding
description:
  SSU ribosomal protein S5p; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: GM3708_739
symbol: rplR
gene_biotype: protein_coding
description:
  LSU ribosomal protein L18p; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: GM3708_74
symbol: GM3708_74
gene_biotype: protein_coding
description:
  Chorismate mutase II; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.


ensembl_gene_id: GM3708_740
symbol: rplF
gene_biotype: protein_coding
description:
  LSU ribosomal protein L6p; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: GM3708_741
symbol: rpsH
gene_biotype: protein_coding
description:
  SSU ribosomal protein S8p; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: GM3708_742
symbol: rplE
gene_biotype: protein_coding
description:
  LSU ribosomal protein L5p; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: GM3708_743
symbol: rplX
gene_biotype: protein_coding
description:
  LSU ribosomal protein L24p; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: GM3708_744
symbol: rplN
gene_biotype: protein_coding
description:
  LSU ribosomal protein L14p; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: GM3708_745
symbol: rpsQ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S17p; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: GM3708_747
symbol: rplP
gene_biotype: protein_coding
description:
  LSU ribosomal protein L16p; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: GM3708_748
symbol: rpsC
gene_biotype: protein_coding
description:
  SSU ribosomal protein S3p; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: GM3708_749
symbol: rplV
gene_biotype: protein_coding
description:
  LSU ribosomal protein L22p; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: GM3708_75
symbol: GM3708_75
gene_biotype: protein_coding
description:
  Cytochrome c oxidase polypeptide II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).


ensembl_gene_id: GM3708_750
symbol: rpsS
gene_biotype: protein_coding
description:
  SSU ribosomal protein S19p; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: GM3708_751
symbol: rplB
gene_biotype: protein_coding
description:
  LSU ribosomal protein L2p; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: GM3708_752
symbol: rplW
gene_biotype: protein_coding
description:
  LSU ribosomal protein L23p; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: GM3708_754
symbol: rplC
gene_biotype: protein_coding
description:
  LSU ribosomal protein L3p; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: GM3708_76
symbol: GM3708_76
gene_biotype: protein_coding
description:
  Cytochrome c oxidase polypeptide I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.


ensembl_gene_id: GM3708_762
symbol: petC
gene_biotype: protein_coding
description:
  Cytochrome b6-f complex iron-sulfur subunit PetC1; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.


ensembl_gene_id: GM3708_771
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: GM3708_80
symbol: panC/cmk
gene_biotype: protein_coding
description:
  Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. In the N-terminal section; belongs to the pantothenate synthetase family.


ensembl_gene_id: GM3708_802
symbol: BAQ60396.1
gene_biotype: protein_coding
description:
  2-methyl-6-phytyl-1,4-benzoquinone methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. gTMT family.


ensembl_gene_id: GM3708_810
symbol: BAQ60404.1
gene_biotype: protein_coding
description:
  Chemotaxis response regulator protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: GM3708_824
symbol: hslO
gene_biotype: protein_coding
description:
  Chaperonin; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: GM3708_825
symbol: ccsB
gene_biotype: protein_coding
description:
  Cytochrome c-type biogenesis protein Ccs1/ResB; Required during biogenesis of c-type cytochromes (cytochrome c6 and cytochrome f) at the step of heme attachment.


ensembl_gene_id: GM3708_828
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: GM3708_832
symbol: gatC
gene_biotype: protein_coding
description:
  aspartyl-tRNA(Asn) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: GM3708_834
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate-2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: GM3708_840
symbol: BAQ60434.1
gene_biotype: protein_coding
description:
  Hypothetical protein co-occurring with RecR; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: GM3708_849
symbol: trmFO
gene_biotype: protein_coding
description:
  tRNA:m(5)U-54 MTase gid; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: GM3708_851
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: GM3708_856
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: GM3708_857
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: GM3708_859
symbol: BAQ60453.1
gene_biotype: protein_coding
description:
  Thymidylate synthase thyX; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: GM3708_86
symbol: sbcC
gene_biotype: protein_coding
description:
  Exonuclease SbcC; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SMC family. SbcC subfamily.


ensembl_gene_id: GM3708_860
symbol: ctaB
gene_biotype: protein_coding
description:
  Heme O synthase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.


ensembl_gene_id: GM3708_867
symbol: BAQ60461.1
gene_biotype: protein_coding
description:
  tRNA dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: GM3708_876
symbol: rnj
gene_biotype: protein_coding
description:
  Zn-dependent hydrolase; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: GM3708_877
symbol: dapA
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: GM3708_878
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: GM3708_879
symbol: psb27
gene_biotype: protein_coding
description:
  Photosystem II protein Psb27; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster.


ensembl_gene_id: GM3708_890
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: GM3708_900
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen III decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: GM3708_903
symbol: BAQ60497.1
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: GM3708_911
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase epsilon chain; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: GM3708_912
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: GM3708_915
symbol: BAQ60509.1
gene_biotype: protein_coding
description:
  Sodium/hydrogen exchanger family protein; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: GM3708_920
symbol: petJ
gene_biotype: protein_coding
description:
  Cytochrome C553; Functions as an electron carrier between membrane-bound cytochrome b6-f and photosystem I in oxygenic photosynthesis.


ensembl_gene_id: GM3708_922
symbol: ybeY
gene_biotype: protein_coding
description:
  Metal-dependent hydrolase YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: GM3708_925
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase I; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: GM3708_929
symbol: BAQ60523.1
gene_biotype: protein_coding
description:
  Cobalt-zinc-cadmium resistance protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: GM3708_946
symbol: priA
gene_biotype: protein_coding
description:
  Helicase PriA essential for oriC/DnaA-independent DNA replication; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: GM3708_947
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: GM3708_950
symbol: menC
gene_biotype: protein_coding
description:
  O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).


ensembl_gene_id: GM3708_955
symbol: purK
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: GM3708_966
symbol: BAQ60560.1
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: GM3708_972
symbol: plsX
gene_biotype: protein_coding
description:
  phosphate:acyl-ACP acyltransferase PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: GM3708_973
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: GM3708_979
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: GM3708_98
symbol: rplJ
gene_biotype: protein_coding
description:
  LSU ribosomal protein L10p; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: GM3708_99
symbol: rplL
gene_biotype: protein_coding
description:
  LSU ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: GM3708_993
symbol: ureF
gene_biotype: protein_coding
description:
  Urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: GM3708_997
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: GM3708_998
symbol: BAQ60592.1
gene_biotype: protein_coding
description:
  8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.


# pathwayInfo

id: CL:1052
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1052_Electron_transporter,_transferring_electrons_within_cytochrome_b6/f_complex_of_photosystem_II_activity,_and_Cytochrome_b6f_complex

description:
  Electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity, and Cytochrome b6f complex


id: CL:1068
description: Mixed, incl. Subtilase family, and PspA/IM30 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1068_Mixed,_incl._Subtilase_family,_and_PspA/IM30_family


id: CL:1081
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1081_Mostly_uncharacterized,_incl._Antiporter_activity,_and_Cyclic_nucleotide-monophosphate_binding_domain

description:
  Mostly uncharacterized, incl. Antiporter activity, and Cyclic nucleotide-monophosphate binding domain


id: CL:1082
description: Mostly uncharacterized, incl. Antiporter activity, and Respiratory electron transport chain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1082_Mostly_uncharacterized,_incl._Antiporter_activity,_and_Respiratory_electron_transport_chain


id: CL:1083
description: Mostly uncharacterized, incl. Antiporter activity, and Respiratory electron transport chain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1083_Mostly_uncharacterized,_incl._Antiporter_activity,_and_Respiratory_electron_transport_chain


id: CL:1085
description: Mostly uncharacterized, incl. Tetratricopeptide repeat, and Ubiquitin-protein transferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1085_Mostly_uncharacterized,_incl._Tetratricopeptide_repeat,_and_Ubiquitin-protein_transferase_activity


id: CL:1103
description: Mixed, incl. Ubiquitin-protein transferase activity, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1103_Mixed,_incl._Ubiquitin-protein_transferase_activity,_and_Glycosyl_transferases_group_1


id: CL:1118
description: Mixed, incl. Antiporter activity, and Di-haem cytochrome, transmembrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1118_Mixed,_incl._Antiporter_activity,_and_Di-haem_cytochrome,_transmembrane


id: CL:1123
description: Antiporter activity, and Proton-conducting membrane transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1123_Antiporter_activity,_and_Proton-conducting_membrane_transporter


id: CL:1146
description: Mixed, incl. Ferritin-like, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1146_Mixed,_incl._Ferritin-like,_and_Signal


id: CL:1155
description: Mixed, incl. Peptidase M4/M1, CTD superfamily, and Cyclic nucleotide-monophosphate binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1155_Mixed,_incl._Peptidase_M4/M1,_CTD_superfamily,_and_Cyclic_nucleotide-monophosphate_binding_domain


id: CL:1167
description: Mixed, incl. HAS barrel domain, and Exonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1167_Mixed,_incl._HAS_barrel_domain,_and_Exonuclease


id: CL:1170
description: HAS barrel domain, and Exonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1170_HAS_barrel_domain,_and_Exonuclease


id: CL:1181
description: Mixed, incl. O-Antigen ligase, and Peptidase family M50
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1181_Mixed,_incl._O-Antigen_ligase,_and_Peptidase_family_M50


id: CL:1198
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1198_Mixed,_incl._Regulation_of_division_septum_assembly,_and_Type_ISP_restriction-modification_enzyme_LLaBIII,_C-terminal_specificity_domain

description:
  Mixed, incl. Regulation of division septum assembly, and Type ISP restriction-modification enzyme LLaBIII, C-terminal specificity domain


id: CL:1210
description: Mixed, incl. Integral component of membrane, and Envelope
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1210_Mixed,_incl._Integral_component_of_membrane,_and_Envelope


id: CL:1211
description: Mixed, incl. Pectin lyase fold/virulence factor, and Integral component of membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1211_Mixed,_incl._Pectin_lyase_fold/virulence_factor,_and_Integral_component_of_membrane


id: CL:1212
description: Mostly uncharacterized, incl. Pectin lyase fold/virulence factor, and Protein localization
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1212_Mostly_uncharacterized,_incl._Pectin_lyase_fold/virulence_factor,_and_Protein_localization


id: CL:1213
description: Mostly uncharacterized, incl. Pectin lyase fold/virulence factor, and Cell cycle process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1213_Mostly_uncharacterized,_incl._Pectin_lyase_fold/virulence_factor,_and_Cell_cycle_process


id: CL:1215
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1215_Mostly_uncharacterized,_incl._Pectin_lyase_fold/virulence_factor,_and_Protein_of_unknown_function_DUF1822

description:
  Mostly uncharacterized, incl. Pectin lyase fold/virulence factor, and Protein of unknown function DUF1822


id: CL:1216
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1216_Mostly_uncharacterized,_incl._Pectin_lyase_fold/virulence_factor,_and_Protein_of_unknown_function_DUF1822

description:
  Mostly uncharacterized, incl. Pectin lyase fold/virulence factor, and Protein of unknown function DUF1822


id: CL:1218
description: Mostly uncharacterized, incl. CHAT domain, and Protein of unknown function DUF1822
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1218_Mostly_uncharacterized,_incl._CHAT_domain,_and_Protein_of_unknown_function_DUF1822


id: CL:1220
description: Mixed, incl. CHAT domain, and Protein of unknown function DUF1822
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1220_Mixed,_incl._CHAT_domain,_and_Protein_of_unknown_function_DUF1822


id: CL:1222
description: Mixed, incl. TPR and ankyrin repeat-containing protein 1, and Macro domain-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1222_Mixed,_incl._TPR_and_ankyrin_repeat-containing_protein_1,_and_Macro_domain-like


id: CL:1225
description: Mixed, incl. TPR and ankyrin repeat-containing protein 1, and Parallel beta-helix repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1225_Mixed,_incl._TPR_and_ankyrin_repeat-containing_protein_1,_and_Parallel_beta-helix_repeats


id: CL:1237
description: Mixed, incl. Macro domain-like, and Protein of unknown function DUF1822
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1237_Mixed,_incl._Macro_domain-like,_and_Protein_of_unknown_function_DUF1822


id: CL:1254
description: Mixed, incl. Protein of unknown function DUF4335, and Translocation and assembly module TamB
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1254_Mixed,_incl._Protein_of_unknown_function_DUF4335,_and_Translocation_and_assembly_module_TamB


id: CL:1267
description: Protein of unknown function DUF3038, and Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1267_Protein_of_unknown_function_DUF3038,_and_Chromosome_segregation


id: CL:128
description: Mixed, incl. Integral component of membrane, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:128_Mixed,_incl._Integral_component_of_membrane,_and_Signal


id: CL:1283
description: Pectin lyase fold/virulence factor, and Pyrroline-5-carboxylate reductase, catalytic, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1283_Pectin_lyase_fold/virulence_factor,_and_Pyrroline-5-carboxylate_reductase,_catalytic,_N-terminal


id: CL:129
description: Mixed, incl. Integral component of membrane, and Outer membrane-bounded periplasmic space
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:129_Mixed,_incl._Integral_component_of_membrane,_and_Outer_membrane-bounded_periplasmic_space


id: CL:1300
description: Mostly uncharacterized, incl. Cutinase, and Dicarboxylic acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1300_Mostly_uncharacterized,_incl._Cutinase,_and_Dicarboxylic_acid_transport


id: CL:1303
description: Mixed, incl. Glycosyl transferases group 1, and Glycosyltransferase Family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1303_Mixed,_incl._Glycosyl_transferases_group_1,_and_Glycosyltransferase_Family_4


id: CL:131
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:131_Mostly_uncharacterized,_incl._AbrB-like_transcriptional_regulator,_and_Mo-dependent_nitrogenase_C-terminus

description:
  Mostly uncharacterized, incl. AbrB-like transcriptional regulator, and Mo-dependent nitrogenase C-terminus


id: CL:133
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:133_Mostly_uncharacterized,_incl._AbrB-like_transcriptional_regulator,_and_Mo-dependent_nitrogenase_C-terminus

description:
  Mostly uncharacterized, incl. AbrB-like transcriptional regulator, and Mo-dependent nitrogenase C-terminus


id: CL:1331
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1331_Mostly_uncharacterized,_incl._4-vinyl_reductase,_4VR,_and_Type_II_secretion_system_protein_GspE,_N-terminal_superfamily

description:
  Mostly uncharacterized, incl. 4-vinyl reductase, 4VR, and Type II secretion system protein GspE, N-terminal superfamily


id: CL:1332
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1332_Mostly_uncharacterized,_incl._Type_II_secretion_system_protein_GspE,_N-terminal_superfamily,_and_TonB,_C-terminal

description:
  Mostly uncharacterized, incl. Type II secretion system protein GspE, N-terminal superfamily, and TonB, C-terminal


id: CL:1333
description: Mixed, incl. Type II secretion system protein GspE, N-terminal superfamily, and TonB, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1333_Mixed,_incl._Type_II_secretion_system_protein_GspE,_N-terminal_superfamily,_and_TonB,_C-terminal


id: CL:1335
description: Type II secretion system protein GspE, N-terminal superfamily, and TonB, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1335_Type_II_secretion_system_protein_GspE,_N-terminal_superfamily,_and_TonB,_C-terminal


id: CL:134
description: Mostly uncharacterized, incl. Mo-dependent nitrogenase C-terminus, and Heparin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:134_Mostly_uncharacterized,_incl._Mo-dependent_nitrogenase_C-terminus,_and_Heparin_binding


id: CL:1352
description: Mixed, incl. MmeI-like, N-terminal domain, and Solute:cation symporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1352_Mixed,_incl._MmeI-like,_N-terminal_domain,_and_Solute:cation_symporter_activity


id: CL:136
description: Mostly uncharacterized, incl. Mo-dependent nitrogenase C-terminus, and Heparin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:136_Mostly_uncharacterized,_incl._Mo-dependent_nitrogenase_C-terminus,_and_Heparin_binding


id: CL:1367
description: Mixed, incl. 4-vinyl reductase, 4VR, and Phycobilisome protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1367_Mixed,_incl._4-vinyl_reductase,_4VR,_and_Phycobilisome_protein


id: CL:1370
description: 4-vinyl reductase, 4VR, and Adrenodoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1370_4-vinyl_reductase,_4VR,_and_Adrenodoxin


id: CL:138
description: Mostly uncharacterized, incl. Mo-dependent nitrogenase C-terminus, and CO2 hydration
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:138_Mostly_uncharacterized,_incl._Mo-dependent_nitrogenase_C-terminus,_and_CO2_hydration


id: CL:1386
description: Mixed, incl. Band 7 domain, and Bacterial-type flagellum organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1386_Mixed,_incl._Band_7_domain,_and_Bacterial-type_flagellum_organization


id: CL:1388
description: Flotillin, and Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1388_Flotillin,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: CL:140
description: Mixed, incl. Protein import, and Outer membrane-bounded periplasmic space
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:140_Mixed,_incl._Protein_import,_and_Outer_membrane-bounded_periplasmic_space


id: CL:1403
description: Bacterial-type flagellum organization, and Protein of unknown function DUF928
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1403_Bacterial-type_flagellum_organization,_and_Protein_of_unknown_function_DUF928


id: CL:1414
description: Mostly uncharacterized, incl. Cyclic nucleotide-binding domain superfamily, and CoA-ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1414_Mostly_uncharacterized,_incl._Cyclic_nucleotide-binding_domain_superfamily,_and_CoA-ligase_activity


id: CL:1415
description: Mixed, incl. Cyclic nucleotide-binding domain superfamily, and CoA-ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1415_Mixed,_incl._Cyclic_nucleotide-binding_domain_superfamily,_and_CoA-ligase_activity


id: CL:1416
description: Mixed, incl. CoA-ligase activity, and Phospholipase D/Transphosphatidylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1416_Mixed,_incl._CoA-ligase_activity,_and_Phospholipase_D/Transphosphatidylase


id: CL:1429
description: Mixed, incl. Protein of unknown function DUF2808, and Carbohydrate-selective porin OprB superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1429_Mixed,_incl._Protein_of_unknown_function_DUF2808,_and_Carbohydrate-selective_porin_OprB_superfamily


id: CL:1440
description: Mixed, incl. Coenzyme F420 binding, and Regulator of K+ conductance, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1440_Mixed,_incl._Coenzyme_F420_binding,_and_Regulator_of_K+_conductance,_C-terminal


id: CL:1460
description: Mostly uncharacterized, incl. Channel activity, and CsbD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1460_Mostly_uncharacterized,_incl._Channel_activity,_and_CsbD-like


id: CL:1461
description: Mostly uncharacterized, incl. Channel activity, and CsbD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1461_Mostly_uncharacterized,_incl._Channel_activity,_and_CsbD-like


id: CL:1462
description: Mostly uncharacterized, incl. CsbD-like, and Porin activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1462_Mostly_uncharacterized,_incl._CsbD-like,_and_Porin_activity


id: CL:1464
description: Mixed, incl. CsbD-like, and Porin activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1464_Mixed,_incl._CsbD-like,_and_Porin_activity


id: CL:1465
description: Mixed, incl. Porin activity, and Peroxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1465_Mixed,_incl._Porin_activity,_and_Peroxidase


id: CL:1466
description: Mixed, incl. Porin activity, and Peroxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1466_Mixed,_incl._Porin_activity,_and_Peroxidase


id: CL:1468
description: Porin activity, and Phycobilisome linker domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1468_Porin_activity,_and_Phycobilisome_linker_domain_superfamily


id: CL:1480
description: Mixed, incl. Peroxidase, and Late competence development protein ComFB
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1480_Mixed,_incl._Peroxidase,_and_Late_competence_development_protein_ComFB


id: CL:1489
description: Mixed, incl. OmpA family, and PspA/IM30 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1489_Mixed,_incl._OmpA_family,_and_PspA/IM30_family


id: CL:1498
description: Mixed, incl. CsbD-like, and Rho termination factor, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1498_Mixed,_incl._CsbD-like,_and_Rho_termination_factor,_N-terminal


id: CL:1518
description: Mixed, incl. Sulfotransferase family, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1518_Mixed,_incl._Sulfotransferase_family,_and_Acetyltransferase_(GNAT)_domain


id: CL:1520
description: Sulfotransferase family, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1520_Sulfotransferase_family,_and_Acetyltransferase_(GNAT)_domain


id: CL:1537
description: Mixed, incl. rSAM-associated Gly-rich repeat protein, and Sulfuric ester hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1537_Mixed,_incl._rSAM-associated_Gly-rich_repeat_protein,_and_Sulfuric_ester_hydrolase_activity


id: CL:1538
description: Mixed, incl. Gated channel activity, and Cutinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1538_Mixed,_incl._Gated_channel_activity,_and_Cutinase


id: CL:1541
description: Mixed, incl. Domain of unknown function DUF202, and Extracellular ligand-gated ion channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1541_Mixed,_incl._Domain_of_unknown_function_DUF202,_and_Extracellular_ligand-gated_ion_channel_activity


id: CL:1558
description: Mixed, incl. DNA binding HTH domain, AraC-type, and Protein of unknown function DUF2808
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1558_Mixed,_incl._DNA_binding_HTH_domain,_AraC-type,_and_Protein_of_unknown_function_DUF2808


id: CL:1567
description: rSAM-associated Gly-rich repeat protein, and Radical SAM superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1567_rSAM-associated_Gly-rich_repeat_protein,_and_Radical_SAM_superfamily


id: CL:1576
description: Mixed, incl. Response to hypoxia, and Lysyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1576_Mixed,_incl._Response_to_hypoxia,_and_Lysyltransferase_activity


id: CL:1586
description: Mixed, incl. PmbA/TldA metallopeptidase domain 1, and Papain-like cysteine peptidase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1586_Mixed,_incl._PmbA/TldA_metallopeptidase_domain_1,_and_Papain-like_cysteine_peptidase_superfamily


id: CL:1587
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1587_Mostly_uncharacterized,_incl._Papain-like_cysteine_peptidase_superfamily,_and_Glycosyl_transferase_family_2

description:
  Mostly uncharacterized, incl. Papain-like cysteine peptidase superfamily, and Glycosyl transferase family 2


id: CL:1589
description: Mixed, incl. Papain-like cysteine peptidase superfamily, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1589_Mixed,_incl._Papain-like_cysteine_peptidase_superfamily,_and_Glycosyl_transferase_family_2


id: CL:1591
description: Mixed, incl. Secretion of lysosomal enzymes, and S-layer homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1591_Mixed,_incl._Secretion_of_lysosomal_enzymes,_and_S-layer_homology_domain


id: CL:162
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:162_Mixed,_incl._Mo-dependent_nitrogenase_C-terminus,_and_Glyoxalase/Bleomycin_resistance_protein/Dioxygenase_superfamily

description:
  Mixed, incl. Mo-dependent nitrogenase C-terminus, and Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily


id: CL:1620
description: PmbA/TldA metallopeptidase domain 1, and DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1620_PmbA/TldA_metallopeptidase_domain_1,_and_DDE_transposase_sub-family


id: CL:1641
description: Mixed, incl. Poly A polymerase head domain, and Magnesium chelatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1641_Mixed,_incl._Poly_A_polymerase_head_domain,_and_Magnesium_chelatase_activity


id: CL:1659
description: Signaling, and PAS domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1659_Signaling,_and_PAS_domain_superfamily


id: CL:1661
description: Signaling, and PAS domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1661_Signaling,_and_PAS_domain_superfamily


id: CL:1667
description: cheY-homologous receiver domain, and EAL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1667_cheY-homologous_receiver_domain,_and_EAL_domain


id: CL:1669
description: cheY-homologous receiver domain, and EAL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1669_cheY-homologous_receiver_domain,_and_EAL_domain


id: CL:1672
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1672_PAS_domain_superfamily,_and_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain

description:
  PAS domain superfamily, and Signal transduction histidine kinase, dimerisation/phosphoacceptor domain


id: CL:1675
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1675_PAS_domain_superfamily,_and_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain

description:
  PAS domain superfamily, and Signal transduction histidine kinase, dimerisation/phosphoacceptor domain


id: CL:1677
description: Signal transduction histidine kinase, dimerisation/phosphoacceptor domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1677_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain


id: CL:1680
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1680_Motif_C-terminal_to_PAS_motifs_(likely_to_contribute_to_PAS_structural_domain),_and_Double_Cache_domain_1

description:
  Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain), and Double Cache domain 1


id: CL:1682
description: Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1682_Motif_C-terminal_to_PAS_motifs_(likely_to_contribute_to_PAS_structural_domain)


id: CL:1763
description: CheW-like domain, and Transducer
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1763_CheW-like_domain,_and_Transducer


id: CL:1765
description: CheW-like domain, and Transducer
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1765_CheW-like_domain,_and_Transducer


id: CL:1766
description: CheW-like domain, and Transducer
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1766_CheW-like_domain,_and_Transducer


id: CL:1785
description: CheW-like domain, and Transducer
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1785_CheW-like_domain,_and_Transducer


id: CL:1802
description: Histidine kinase CheA-like, homodimeric domain, and Transducer
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1802_Histidine_kinase_CheA-like,_homodimeric_domain,_and_Transducer


id: CL:1836
description: Phosphorelay signal transduction system
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1836_Phosphorelay_signal_transduction_system


id: CL:1839
description: Phosphorelay signal transduction system
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1839_Phosphorelay_signal_transduction_system


id: CL:1841
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1841_Two-component_regulatory_system,_and_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain

description:
  Two-component regulatory system, and Signal transduction histidine kinase, dimerisation/phosphoacceptor domain


id: CL:1843
description: Mixed, incl. OmpR/PhoB-type DNA-binding domain, and ArlS, sensor domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1843_Mixed,_incl._OmpR/PhoB-type_DNA-binding_domain,_and_ArlS,_sensor_domain


id: CL:1845
description: Mixed, incl. Sequence-specific DNA binding, and Phytochrome chromophore attachment domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1845_Mixed,_incl._Sequence-specific_DNA_binding,_and_Phytochrome_chromophore_attachment_domain


id: CL:186
description: Mixed, incl. Heat shock protein binding, and MFS transporter superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:186_Mixed,_incl._Heat_shock_protein_binding,_and_MFS_transporter_superfamily


id: CL:1875
description: Mixed, incl. Heterocyst, and ArlS, sensor domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1875_Mixed,_incl._Heterocyst,_and_ArlS,_sensor_domain


id: CL:1902
description: Mixed, incl. Protein autophosphorylation, and Receptor
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1902_Mixed,_incl._Protein_autophosphorylation,_and_Receptor


id: CL:1924
description: Potassium transport, and Ion channel
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1924_Potassium_transport,_and_Ion_channel


id: CL:1941
description: Mixed, incl. Anti-sigma factor antagonist, and PPM-type phosphatase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1941_Mixed,_incl._Anti-sigma_factor_antagonist,_and_PPM-type_phosphatase-like_domain


id: CL:1943
description: Mixed, incl. Anti-sigma factor antagonist, and Sigma factor antagonist activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1943_Mixed,_incl._Anti-sigma_factor_antagonist,_and_Sigma_factor_antagonist_activity


id: CL:195
description: Mostly uncharacterized, incl. TPM domain, and PRC-barrel domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:195_Mostly_uncharacterized,_incl._TPM_domain,_and_PRC-barrel_domain


id: CL:1958
description: STAS domain, and PPM-type phosphatase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1958_STAS_domain,_and_PPM-type_phosphatase-like_domain


id: CL:196
description: Mostly uncharacterized, incl. TPM domain, and Folic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:196_Mostly_uncharacterized,_incl._TPM_domain,_and_Folic_acid_metabolic_process


id: CL:197
description: Mixed, incl. Protein of unknown function DUF760, and AbrB-like transcriptional regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:197_Mixed,_incl._Protein_of_unknown_function_DUF760,_and_AbrB-like_transcriptional_regulator


id: CL:1976
description: Biological rhythms, and Circadian clock KaiC, bacteria
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1976_Biological_rhythms,_and_Circadian_clock_KaiC,_bacteria


id: CL:1999
description: Mixed, incl. Phosphoglucomutase, and Protein of unknown function DUF1816
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:1999_Mixed,_incl._Phosphoglucomutase,_and_Protein_of_unknown_function_DUF1816


id: CL:2009
description: Mixed, incl. Pilus organization, and Protein secretion by the type II secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2009_Mixed,_incl._Pilus_organization,_and_Protein_secretion_by_the_type_II_secretion_system


id: CL:2010
description: Pilus organization, and Protein secretion by the type II secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2010_Pilus_organization,_and_Protein_secretion_by_the_type_II_secretion_system


id: CL:2012
description: Pilus organization, and Protein secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2012_Pilus_organization,_and_Protein_secretion


id: CL:2015
description: Type IV pilin-like G and H, putative, and Aspartic-type peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2015_Type_IV_pilin-like_G_and_H,_putative,_and_Aspartic-type_peptidase_activity


id: CL:2045
description: Horizontal gene transfer, and Subunit ChlI of Mg-chelatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2045_Horizontal_gene_transfer,_and_Subunit_ChlI_of_Mg-chelatase


id: CL:2061
description: Mixed, incl. Protein kinase-like domain superfamily, and Tetratricopeptide repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2061_Mixed,_incl._Protein_kinase-like_domain_superfamily,_and_Tetratricopeptide_repeats


id: CL:2062
description: Mixed, incl. Tetratricopeptide repeats, and WD40 repeat, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2062_Mixed,_incl._Tetratricopeptide_repeats,_and_WD40_repeat,_conserved_site


id: CL:2064
description: Mixed, incl. Tetratricopeptide repeats, and WD40 repeat, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2064_Mixed,_incl._Tetratricopeptide_repeats,_and_WD40_repeat,_conserved_site


id: CL:2065
description: Mixed, incl. Tetratricopeptide repeats, and WD40 repeat, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2065_Mixed,_incl._Tetratricopeptide_repeats,_and_WD40_repeat,_conserved_site


id: CL:2067
description: Tetratricopeptide repeats, and WD40 repeat, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2067_Tetratricopeptide_repeats,_and_WD40_repeat,_conserved_site


id: CL:2069
description: Mixed, incl. MPN domain, and DHHA1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2069_Mixed,_incl._MPN_domain,_and_DHHA1_domain


id: CL:2086
description: Viral process, and Tetratricopeptide repeat 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2086_Viral_process,_and_Tetratricopeptide_repeat_2


id: CL:2103
description: Mixed, incl. Double-GTPase 1, and Dynamin family
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2103_Mixed,_incl._Double-GTPase_1,_and_Dynamin_family


id: CL:2106
description: Mixed, incl. Dynamin family, and Double-GTPase 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2106_Mixed,_incl._Dynamin_family,_and_Double-GTPase_1


id: CL:212
description: Mixed, incl. TPM domain, and Folic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:212_Mixed,_incl._TPM_domain,_and_Folic_acid_metabolic_process


id: CL:2127
description: Flavin amine oxidase, and Zinc finger, SWIM-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2127_Flavin_amine_oxidase,_and_Zinc_finger,_SWIM-type


id: CL:2142
description: Mostly uncharacterized, incl. Acid phosphatase homologues, and Prohibitin
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2142_Mostly_uncharacterized,_incl._Acid_phosphatase_homologues,_and_Prohibitin


id: CL:2143
description: Mixed, incl. Acid phosphatase homologues, and Prohibitin
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2143_Mixed,_incl._Acid_phosphatase_homologues,_and_Prohibitin


id: CL:2144
description: Mixed, incl. SNF2-like, N-terminal domain superfamily, and RNA polymerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2144_Mixed,_incl._SNF2-like,_N-terminal_domain_superfamily,_and_RNA_polymerase


id: CL:2155
description: Acid phosphatase homologues, and Prohibitin
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2155_Acid_phosphatase_homologues,_and_Prohibitin


id: CL:2164
description: Mixed, incl. mRNA catabolic process, and Short-chain dehydrogenase/reductase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2164_Mixed,_incl._mRNA_catabolic_process,_and_Short-chain_dehydrogenase/reductase,_conserved_site


id: CL:2174
description: Protein kinase domain, and Protein phosphatase 2C family
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2174_Protein_kinase_domain,_and_Protein_phosphatase_2C_family


id: CL:2175
description: Protein kinase domain, and Protein phosphatase 2C family
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2175_Protein_kinase_domain,_and_Protein_phosphatase_2C_family


id: CL:2178
description: Protein kinase domain, and Protein phosphatase 2C family
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2178_Protein_kinase_domain,_and_Protein_phosphatase_2C_family


id: CL:2181
description: Protein kinase domain, and Protein phosphatase 2C family
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2181_Protein_kinase_domain,_and_Protein_phosphatase_2C_family


id: CL:2209
description: Von Willebrand factor, type A, and Protein phosphatase 2C family
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2209_Von_Willebrand_factor,_type_A,_and_Protein_phosphatase_2C_family


id: CL:222
description: Mixed, incl. PRC-barrel domain, and Peptidoglycan binding-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:222_Mixed,_incl._PRC-barrel_domain,_and_Peptidoglycan_binding-like


id: CL:2224
description: Localization, and Lipid A metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2224_Localization,_and_Lipid_A_metabolic_process


id: CL:2225
description: Mixed, incl. HlyD family secretion protein, and Lipid A metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2225_Mixed,_incl._HlyD_family_secretion_protein,_and_Lipid_A_metabolic_process


id: CL:2227
description: Mixed, incl. Lipid A metabolic process, and LytR_cpsA_psr family
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2227_Mixed,_incl._Lipid_A_metabolic_process,_and_LytR_cpsA_psr_family


id: CL:2228
description: Mixed, incl. Lipid A metabolic process, and Permease LptG/LptF-related
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2228_Mixed,_incl._Lipid_A_metabolic_process,_and_Permease_LptG/LptF-related


id: CL:2231
description: Lipid A metabolic process, and Permease LptG/LptF-related
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2231_Lipid_A_metabolic_process,_and_Permease_LptG/LptF-related


id: CL:224
description: Mixed, incl. Protein of unknown function DUF3318, and Beta-lactamase, class-A
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:224_Mixed,_incl._Protein_of_unknown_function_DUF3318,_and_Beta-lactamase,_class-A


id: CL:2261
description: Mixed, incl. LytR_cpsA_psr family, and Regulation of cell cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2261_Mixed,_incl._LytR_cpsA_psr_family,_and_Regulation_of_cell_cycle


id: CL:2263
description: Mixed, incl. LytR_cpsA_psr family, and Glycosyl transferase family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2263_Mixed,_incl._LytR_cpsA_psr_family,_and_Glycosyl_transferase_family_4


id: CL:2284
description: Mixed, incl. HlyD family secretion protein, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2284_Mixed,_incl._HlyD_family_secretion_protein,_and_MacB,_ATP-binding_domain


id: CL:2286
description: Hydrophobe/amphiphile efflux-1 HAE1, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2286_Hydrophobe/amphiphile_efflux-1_HAE1,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:2312
description: Mixed, incl. Iron ion transport, and Iron ion homeostasis
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2312_Mixed,_incl._Iron_ion_transport,_and_Iron_ion_homeostasis


id: CL:2313
description: Mixed, incl. Iron ion transport, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2313_Mixed,_incl._Iron_ion_transport,_and_Protein_transport


id: CL:2315
description: Mixed, incl. Iron coordination entity transport, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2315_Mixed,_incl._Iron_coordination_entity_transport,_and_Protein_transport


id: CL:2316
description: Iron coordination entity transport, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2316_Iron_coordination_entity_transport,_and_Periplasmic_binding_protein


id: CL:2319
description: Import into cell, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2319_Import_into_cell,_and_Periplasmic_binding_protein


id: CL:2335
description: Biopolymer transport protein ExbD/TolR, and MotA/TolQ/ExbB proton channel
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2335_Biopolymer_transport_protein_ExbD/TolR,_and_MotA/TolQ/ExbB_proton_channel


id: CL:2356
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2356_Mixed,_incl._Bacterial_extracellular_solute-binding_protein,_and_Molybdate/tungstate_binding,_C-terminal

description:
  Mixed, incl. Bacterial extracellular solute-binding protein, and Molybdate/tungstate binding, C-terminal


id: CL:2367
description: Mixed, incl. Serine-type endopeptidase activity, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2367_Mixed,_incl._Serine-type_endopeptidase_activity,_and_AAA_domain


id: CL:2368
description: Mixed, incl. AAA domain, and Serine-type endopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2368_Mixed,_incl._AAA_domain,_and_Serine-type_endopeptidase_activity


id: CL:2381
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2381_Mixed,_incl._Quinoprotein_alcohol_dehydrogenase-like_superfamily,_and_Acetyltransferase_(GNAT)_family

description:
  Mixed, incl. Quinoprotein alcohol dehydrogenase-like superfamily, and Acetyltransferase (GNAT) family


id: CL:2390
description: Mixed, incl. Carboxypeptidase, and Amino sugar metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2390_Mixed,_incl._Carboxypeptidase,_and_Amino_sugar_metabolic_process


id: CL:2391
description: Mixed, incl. Carboxypeptidase, and Amino sugar metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2391_Mixed,_incl._Carboxypeptidase,_and_Amino_sugar_metabolic_process


id: CL:2392
description: Amino sugar metabolic process, and Ami_3
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2392_Amino_sugar_metabolic_process,_and_Ami_3


id: CL:2412
description: D-Ala-D-Ala carboxypeptidase 3 (S13) family, and Peptidase S49
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2412_D-Ala-D-Ala_carboxypeptidase_3_(S13)_family,_and_Peptidase_S49


id: CL:2432
description: Mixed, incl. RNA polymerase sigma-70 like, and Adaptor protein ClpS, core
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2432_Mixed,_incl._RNA_polymerase_sigma-70_like,_and_Adaptor_protein_ClpS,_core


id: CL:2434
description: Mixed, incl. Adaptor protein ClpS, core, and RNA polymerase sigma-70 like
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2434_Mixed,_incl._Adaptor_protein_ClpS,_core,_and_RNA_polymerase_sigma-70_like


id: CL:2461
description: Mixed, incl. Dolichyl-phosphate-mannose-protein mannosyltransferase, and Lysyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2461_Mixed,_incl._Dolichyl-phosphate-mannose-protein_mannosyltransferase,_and_Lysyltransferase_activity


id: CL:2462
description: Mixed, incl. Lysyltransferase activity, and Dicarboxylic acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2462_Mixed,_incl._Lysyltransferase_activity,_and_Dicarboxylic_acid_transport


id: CL:247
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:247_Mixed,_incl._Histidine_kinase-like_ATPase_domain,_and_Glutamine_synthetase/guanido_kinase,_catalytic_domain

description:
  Mixed, incl. Histidine kinase-like ATPase domain, and Glutamine synthetase/guanido kinase, catalytic domain


id: CL:2473
description: Dolichyl-phosphate-mannose-protein mannosyltransferase, and Mannosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2473_Dolichyl-phosphate-mannose-protein_mannosyltransferase,_and_Mannosylation


id: CL:2501
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2501_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:2502
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2502_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:2503
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2503_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:2504
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2504_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:2505
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2505_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:2507
description: Ribosome, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2507_Ribosome,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:2508
description: Ribosome, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2508_Ribosome,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:2511
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2511_Ribosome,_and_Regulation_of_translation


id: CL:2514
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2514_Ribosome,_and_Regulation_of_translation


id: CL:2516
description: Ribosome, and Elongation factor
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2516_Ribosome,_and_Elongation_factor


id: CL:2519
description: Ribosome, and Elongation factor
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2519_Ribosome,_and_Elongation_factor


id: CL:2535
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2535_Mixed,_incl._KOW_(Kyprides,_Ouzounis,_Woese)_motif.,_and_Nucleotide-binding_alpha-beta_plait_domain_superfamily

description:
  Mixed, incl. KOW (Kyprides, Ouzounis, Woese) motif., and Nucleotide-binding alpha-beta plait domain superfamily


id: CL:2551
description: Large ribosomal subunit, and tRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2551_Large_ribosomal_subunit,_and_tRNA-binding


id: CL:2576
description: Mixed, incl. L28p-like, and Translation elongation factor EF1B/ribosomal protein S6
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2576_Mixed,_incl._L28p-like,_and_Translation_elongation_factor_EF1B/ribosomal_protein_S6


id: CL:2592
description: Small ribosomal subunit, and rRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2592_Small_ribosomal_subunit,_and_rRNA-binding


id: CL:2596
description: Mixed, incl. Small ribosomal subunit, and K Homology domain, type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2596_Mixed,_incl._Small_ribosomal_subunit,_and_K_Homology_domain,_type_2


id: CL:261
description: Mostly uncharacterized, incl. Outer membrane-bounded periplasmic space, and DICT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:261_Mostly_uncharacterized,_incl._Outer_membrane-bounded_periplasmic_space,_and_DICT_domain


id: CL:262
description: Mostly uncharacterized, incl. Outer membrane-bounded periplasmic space, and DICT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:262_Mostly_uncharacterized,_incl._Outer_membrane-bounded_periplasmic_space,_and_DICT_domain


id: CL:263
description: Mostly uncharacterized, incl. DICT domain, and Enzyme binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:263_Mostly_uncharacterized,_incl._DICT_domain,_and_Enzyme_binding


id: CL:264
description: Mostly uncharacterized, incl. DICT domain, and LSM domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:264_Mostly_uncharacterized,_incl._DICT_domain,_and_LSM_domain_superfamily


id: CL:2643
description: RNA polymerase, and Transcription termination
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2643_RNA_polymerase,_and_Transcription_termination


id: CL:266
description: Mixed, incl. DICT domain, and LSM domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:266_Mixed,_incl._DICT_domain,_and_LSM_domain_superfamily


id: CL:268
description: Mixed, incl. DICT domain, and GTP binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:268_Mixed,_incl._DICT_domain,_and_GTP_binding


id: CL:2733
description: Mixed, incl. Pseudouridine synthase, RluA-like, conserved site, and RNA helicase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2733_Mixed,_incl._Pseudouridine_synthase,_RluA-like,_conserved_site,_and_RNA_helicase_activity


id: CL:2734
description: RNA helicase activity, and NusB family
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2734_RNA_helicase_activity,_and_NusB_family


id: CL:2743
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2743_Pseudouridine_synthase,_RluA-like,_conserved_site,_and_OBG-type_guanine_nucleotide-binding_(G)_domain

description:
  Pseudouridine synthase, RluA-like, conserved site, and OBG-type guanine nucleotide-binding (G) domain


id: CL:2763
description: aminoacyl-tRNA editing activity, and glutamyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2763_aminoacyl-tRNA_editing_activity,_and_glutamyl-tRNA_aminoacylation


id: CL:2776
description: Mixed, incl. phenylalanyl-tRNA aminoacylation, and histidine-tRNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2776_Mixed,_incl._phenylalanyl-tRNA_aminoacylation,_and_histidine-tRNA_ligase_activity


id: CL:2793
description: glutamyl-tRNA(Gln) amidotransferase complex, and OB-fold nucleic acid binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2793_glutamyl-tRNA(Gln)_amidotransferase_complex,_and_OB-fold_nucleic_acid_binding_domain


id: CL:2804
description: Mixed, incl. R3H domain, and tRNA 5-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2804_Mixed,_incl._R3H_domain,_and_tRNA_5-end_processing


id: CL:2813
description: Mixed, incl. Ribonuclease II/R, and 3-5 exonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2813_Mixed,_incl._Ribonuclease_II/R,_and_3-5_exonuclease


id: CL:2816
description: Ribonuclease II/R, and 3-5 exonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2816_Ribonuclease_II/R,_and_3-5_exonuclease


id: CL:2834
description: Protein folding, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2834_Protein_folding,_and_ATP-dependent_peptidase_activity


id: CL:2835
description: Protein folding, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2835_Protein_folding,_and_ATP-dependent_peptidase_activity


id: CL:2836
description: Protein folding, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2836_Protein_folding,_and_ATP-dependent_peptidase_activity


id: CL:2838
description: Stress response, and DnaJ domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2838_Stress_response,_and_DnaJ_domain


id: CL:2839
description: Stress response, and DnaJ domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2839_Stress_response,_and_DnaJ_domain


id: CL:2841
description: Stress response, and DnaJ C terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2841_Stress_response,_and_DnaJ_C_terminal_domain


id: CL:2844
description: ATP-dependent protein folding chaperone, and GrpE
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2844_ATP-dependent_protein_folding_chaperone,_and_GrpE


id: CL:2872
description: Clp protease, and Clp ATPase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2872_Clp_protease,_and_Clp_ATPase,_C-terminal


id: CL:2893
description: Peptidyl-proline modification, and Antigen processing-Cross presentation
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2893_Peptidyl-proline_modification,_and_Antigen_processing-Cross_presentation


id: CL:2904
description: Mixed, incl. MmeI-like, N-terminal domain, and MreB/Mbl protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2904_Mixed,_incl._MmeI-like,_N-terminal_domain,_and_MreB/Mbl_protein


id: CL:2914
description: DNA repair, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2914_DNA_repair,_and_DNA_replication


id: CL:2916
description: DNA repair, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2916_DNA_repair,_and_DNA_replication


id: CL:2917
description: Homologous recombination, and DNA damage
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2917_Homologous_recombination,_and_DNA_damage


id: CL:2918
description: DNA damage, and DNA helicase, UvrD/REP type
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2918_DNA_damage,_and_DNA_helicase,_UvrD/REP_type


id: CL:2919
description: DNA damage, and DNA helicase, UvrD/REP type
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2919_DNA_damage,_and_DNA_helicase,_UvrD/REP_type


id: CL:2922
description: Mixed, incl. Holliday junction helicase complex, and RecF/RecN/SMC, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2922_Mixed,_incl._Holliday_junction_helicase_complex,_and_RecF/RecN/SMC,_N-terminal


id: CL:2953
description: RecQ zinc-binding, and DNA recombination and repair protein RecA-like, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2953_RecQ_zinc-binding,_and_DNA_recombination_and_repair_protein_RecA-like,_ATP-binding_domain


id: CL:2969
description: Mismatch repair, and DDH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2969_Mismatch_repair,_and_DDH_domain


id: CL:2981
description: DNA replication, and DNA-templated DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2981_DNA_replication,_and_DNA-templated_DNA_replication


id: CL:2983
description: DNA replication, and Sigma-70 factor, region 1.2
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2983_DNA_replication,_and_Sigma-70_factor,_region_1.2


id: CL:2985
description: DNA-directed DNA polymerase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:2985_DNA-directed_DNA_polymerase_activity


id: CL:3012
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3012_Base-excision_repair,_and_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Base-excision repair, and Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: CL:3034
description: Mixed, incl. tRNA processing, and Queuosine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3034_Mixed,_incl._tRNA_processing,_and_Queuosine_biosynthesis


id: CL:3035
description: tRNA processing, and rRNA processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3035_tRNA_processing,_and_rRNA_processing


id: CL:3037
description: tRNA processing, and rRNA base methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3037_tRNA_processing,_and_rRNA_base_methylation


id: CL:3039
description: Mixed, incl. rRNA base methylation, and MnmG, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3039_Mixed,_incl._rRNA_base_methylation,_and_MnmG,_N-terminal_domain


id: CL:304
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:304_Mostly_uncharacterized,_incl._Zinc-dependent_metalloprotease,_and_Domain_of_unknown_function_DUF1400

description:
  Mostly uncharacterized, incl. Zinc-dependent metalloprotease, and Domain of unknown function DUF1400


id: CL:3066
description: Mixed, incl. Methylthiotransferase, and Dynamin family
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3066_Mixed,_incl._Methylthiotransferase,_and_Dynamin_family


id: CL:307
description: Mixed, incl. Zinc-dependent metalloprotease, and Protein secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:307_Mixed,_incl._Zinc-dependent_metalloprotease,_and_Protein_secretion


id: CL:3095
description: Mixed, incl. Regulation of cell shape, and Serine hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3095_Mixed,_incl._Regulation_of_cell_shape,_and_Serine_hydrolase_activity


id: CL:3096
description: Mixed, incl. Regulation of cell shape, and PDZ domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3096_Mixed,_incl._Regulation_of_cell_shape,_and_PDZ_domain


id: CL:3097
description: Regulation of cell shape, and Penicillin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3097_Regulation_of_cell_shape,_and_Penicillin_binding


id: CL:3098
description: Regulation of cell shape, and Penicillin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3098_Regulation_of_cell_shape,_and_Penicillin_binding


id: CL:3100
description: Regulation of cell shape, and Penicillin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3100_Regulation_of_cell_shape,_and_Penicillin_binding


id: CL:3102
description: Cell shape, and Penicillin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3102_Cell_shape,_and_Penicillin_binding


id: CL:3104
description: Cell shape, and Penicillin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3104_Cell_shape,_and_Penicillin_binding


id: CL:3126
description: Penicillin binding, and Cell cycle protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3126_Penicillin_binding,_and_Cell_cycle_protein


id: CL:3161
description: Phosphoglucosamine mutase activity, and MobA-like NTP transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3161_Phosphoglucosamine_mutase_activity,_and_MobA-like_NTP_transferase


id: CL:3173
description: Peptidase S26, and Peptidase M50
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3173_Peptidase_S26,_and_Peptidase_M50


id: CL:3195
description: Mixed, incl. Reproduction, and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3195_Mixed,_incl._Reproduction,_and_Ribosome_biogenesis


id: CL:3198
description: Mixed, incl. Reproduction, and Ribonuclease III family
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3198_Mixed,_incl._Reproduction,_and_Ribonuclease_III_family


id: CL:3220
description: Biosynthesis of amino acids, and Nucleotide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3220_Biosynthesis_of_amino_acids,_and_Nucleotide_metabolic_process


id: CL:3221
description: Cellular amino acid biosynthetic process, and Nucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3221_Cellular_amino_acid_biosynthetic_process,_and_Nucleoside_monophosphate_metabolic_process


id: CL:3222
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3222_Mixed,_incl._Nucleoside_monophosphate_metabolic_process,_and_Glutamine_family_amino_acid_biosynthetic_process

description:
  Mixed, incl. Nucleoside monophosphate metabolic process, and Glutamine family amino acid biosynthetic process


id: CL:3223
description: Nucleoside monophosphate metabolic process, and Arginine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3223_Nucleoside_monophosphate_metabolic_process,_and_Arginine_biosynthetic_process


id: CL:3225
description: Ribonucleoside monophosphate biosynthetic process, and Arginine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3225_Ribonucleoside_monophosphate_biosynthetic_process,_and_Arginine_biosynthetic_process


id: CL:3226
description: Purine biosynthesis, and Glycine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3226_Purine_biosynthesis,_and_Glycine_metabolic_process


id: CL:3251
description: Glycine metabolic process, and Cobalamin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3251_Glycine_metabolic_process,_and_Cobalamin_binding


id: CL:3265
description: Arginine biosynthetic process, and UMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3265_Arginine_biosynthetic_process,_and_UMP_biosynthetic_process


id: CL:3267
description: Pyrimidine biosynthesis, and Amino acid binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3267_Pyrimidine_biosynthesis,_and_Amino_acid_binding


id: CL:327
description: Mixed, incl. RNA 3-end processing, and Glycoside hydrolase family 57, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:327_Mixed,_incl._RNA_3-end_processing,_and_Glycoside_hydrolase_family_57,_N-terminal_domain


id: CL:3305
description: Mixed, incl. Deoxyribonucleotide metabolic process, and AMP salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3305_Mixed,_incl._Deoxyribonucleotide_metabolic_process,_and_AMP_salvage


id: CL:3306
description: Nucleoside phosphate catabolic process, and GMP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3306_Nucleoside_phosphate_catabolic_process,_and_GMP_metabolic_process


id: CL:3308
description: Ribonucleotide catabolic process, and GMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3308_Ribonucleotide_catabolic_process,_and_GMP_biosynthetic_process


id: CL:3325
description: Deoxyribonucleotide biosynthetic process, and Adenylate kinase/UMP-CMP kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3325_Deoxyribonucleotide_biosynthetic_process,_and_Adenylate_kinase/UMP-CMP_kinase


id: CL:3339
description: Nitrogen metabolism, and Proline metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3339_Nitrogen_metabolism,_and_Proline_metabolic_process


id: CL:3357
description: Proline metabolic process, and Symporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3357_Proline_metabolic_process,_and_Symporter_activity


id: CL:336
description: Mixed, incl. Signal, and Transmembrane helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:336_Mixed,_incl._Signal,_and_Transmembrane_helix


id: CL:337
description: Mixed, incl. Signal, and Transmembrane helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:337_Mixed,_incl._Signal,_and_Transmembrane_helix


id: CL:3377
description: Amino-acid biosynthesis, and Aminotransferase, class I/classII
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3377_Amino-acid_biosynthesis,_and_Aminotransferase,_class_I/classII


id: CL:3378
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Histidine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3378_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Histidine_biosynthesis


id: CL:3379
description: Phenylalanine, tyrosine and tryptophan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3379_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis


id: CL:338
description: Mixed, incl. Signal, and Integral component of membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:338_Mixed,_incl._Signal,_and_Integral_component_of_membrane


id: CL:3380
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3380_Chorismate_biosynthetic_process,_and_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway

description:
  Chorismate biosynthetic process, and Aromatic amino acid family biosynthetic process, prephenate pathway


id: CL:3383
description: Chorismate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3383_Chorismate_biosynthetic_process


id: CL:339
description: Mostly uncharacterized, incl. Lipopolysaccharide transport, and Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:339_Mostly_uncharacterized,_incl._Lipopolysaccharide_transport,_and_Chromosome_segregation


id: CL:340
description: Mostly uncharacterized, incl. Lipopolysaccharide transport, and Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:340_Mostly_uncharacterized,_incl._Lipopolysaccharide_transport,_and_Chromosome_segregation


id: CL:341
description: Mostly uncharacterized, incl. Lipopolysaccharide transport, and Protein of unknown function DUF1816
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:341_Mostly_uncharacterized,_incl._Lipopolysaccharide_transport,_and_Protein_of_unknown_function_DUF1816


id: CL:343
description: Mixed, incl. Lipopolysaccharide transport, and PspA/IM30
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:343_Mixed,_incl._Lipopolysaccharide_transport,_and_PspA/IM30


id: CL:3437
description: Branched-chain amino acid metabolic process, and Lysine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3437_Branched-chain_amino_acid_metabolic_process,_and_Lysine_metabolic_process


id: CL:3438
description: Branched-chain amino acid metabolic process, and Threonine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3438_Branched-chain_amino_acid_metabolic_process,_and_Threonine_biosynthetic_process


id: CL:3439
description: Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3439_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:345
description: Mixed, incl. PspA/IM30, and DnaJ domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:345_Mixed,_incl._PspA/IM30,_and_DnaJ_domain


id: CL:3473
description: Lysine biosynthesis, and L,L-diaminopimelate aminotransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3473_Lysine_biosynthesis,_and_L,L-diaminopimelate_aminotransferase_activity


id: CL:3484
description: Carbon metabolism, and Protein lipoylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3484_Carbon_metabolism,_and_Protein_lipoylation


id: CL:3485
description: Carbon metabolism, and Protein lipoylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3485_Carbon_metabolism,_and_Protein_lipoylation


id: CL:3486
description: Pentose phosphate pathway, and Glycolysis / Gluconeogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3486_Pentose_phosphate_pathway,_and_Glycolysis_/_Gluconeogenesis


id: CL:3488
description: Glycolysis / Gluconeogenesis, and Calcium
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3488_Glycolysis_/_Gluconeogenesis,_and_Calcium


id: CL:3490
description: Carbon fixation in photosynthetic organisms, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3490_Carbon_fixation_in_photosynthetic_organisms,_and_Glycolysis


id: CL:3491
description: Glycolysis, and Glyceraldehyde-3-phosphate dehydrogenase, type I
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3491_Glycolysis,_and_Glyceraldehyde-3-phosphate_dehydrogenase,_type_I


id: CL:3493
description: Glyceraldehyde-3-phosphate dehydrogenase, type I, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3493_Glyceraldehyde-3-phosphate_dehydrogenase,_type_I,_and_Glycolysis


id: CL:3510
description: Sugar-phosphatase activity, and Calcium
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3510_Sugar-phosphatase_activity,_and_Calcium


id: CL:3545
description: Citrate cycle (TCA cycle), and Protein lipoylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3545_Citrate_cycle_(TCA_cycle),_and_Protein_lipoylation


id: CL:3547
description: Citrate cycle (TCA cycle), and Malate dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3547_Citrate_cycle_(TCA_cycle),_and_Malate_dehydrogenase_activity


id: CL:3548
description: Malate dehydrogenase activity, and Citrate cycle (TCA cycle)
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3548_Malate_dehydrogenase_activity,_and_Citrate_cycle_(TCA_cycle)


id: CL:3562
description: succinate-CoA ligase complex, and Butanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3562_succinate-CoA_ligase_complex,_and_Butanoate_metabolism


id: CL:3575
description: Mixed, incl. Protein lipoylation, and acetyl-CoA biosynthetic process from pyruvate
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3575_Mixed,_incl._Protein_lipoylation,_and_acetyl-CoA_biosynthetic_process_from_pyruvate


id: CL:3578
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3578_acetyl-CoA_biosynthetic_process_from_pyruvate,_and_Pyridine_nucleotide-disulphide_oxidoreductase,_class_I

description:
  acetyl-CoA biosynthetic process from pyruvate, and Pyridine nucleotide-disulphide oxidoreductase, class I


id: CL:3602
description: 3-hydroxyisobutyrate dehydrogenase-related, and acetyl-CoA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3602_3-hydroxyisobutyrate_dehydrogenase-related,_and_acetyl-CoA_metabolic_process


id: CL:3617
description: Mixed, incl. Nicotinate and nicotinamide metabolism, and Folate biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3617_Mixed,_incl._Nicotinate_and_nicotinamide_metabolism,_and_Folate_biosynthesis


id: CL:3618
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3618_Mixed,_incl._Nicotinate_and_nicotinamide_metabolism,_and_Cellular_modified_amino_acid_biosynthetic_process

description:
  Mixed, incl. Nicotinate and nicotinamide metabolism, and Cellular modified amino acid biosynthetic process


id: CL:3619
description: Mixed, incl. Cellular modified amino acid biosynthetic process, and Riboflavin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3619_Mixed,_incl._Cellular_modified_amino_acid_biosynthetic_process,_and_Riboflavin_metabolic_process


id: CL:3620
description: Riboflavin metabolic process, and Pantothenate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3620_Riboflavin_metabolic_process,_and_Pantothenate_metabolic_process


id: CL:3638
description: Pantothenate metabolic process, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3638_Pantothenate_metabolic_process,_and_Coenzyme_A_biosynthesis


id: CL:3650
description: Folic acid-containing compound biosynthetic process, and Folate biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3650_Folic_acid-containing_compound_biosynthetic_process,_and_Folate_biosynthesis


id: CL:366
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:366_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF1816,_and_Protein_of_unknown_function_DUF4335

description:
  Mostly uncharacterized, incl. Protein of unknown function DUF1816, and Protein of unknown function DUF4335


id: CL:3669
description: Nicotinate and nicotinamide metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3669_Nicotinate_and_nicotinamide_metabolism


id: CL:368
description: Mixed, incl. Protein of unknown function DUF4335, and Protein of unknown function DUF1997
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:368_Mixed,_incl._Protein_of_unknown_function_DUF4335,_and_Protein_of_unknown_function_DUF1997


id: CL:3696
description: Mixed, incl. HIT-like domain, and NUDIX hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3696_Mixed,_incl._HIT-like_domain,_and_NUDIX_hydrolase


id: CL:3708
description: Mixed, incl. Lipid metabolism, and Biotin metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3708_Mixed,_incl._Lipid_metabolism,_and_Biotin_metabolism


id: CL:3710
description: Fatty acid metabolism, and Biotin biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3710_Fatty_acid_metabolism,_and_Biotin_biosynthesis


id: CL:3749
description: Phospholipid metabolism, and rRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3749_Phospholipid_metabolism,_and_rRNA_pseudouridine_synthesis


id: CL:3771
description: Mixed, incl. Oxidative phosphorylation, and Peptidase M16, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3771_Mixed,_incl._Oxidative_phosphorylation,_and_Peptidase_M16,_N-terminal


id: CL:3772
description: Mixed, incl. Oxidative phosphorylation, and Peptidase M16, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3772_Mixed,_incl._Oxidative_phosphorylation,_and_Peptidase_M16,_N-terminal


id: CL:3774
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3774_Mixed,_incl._Oxidoreduction-driven_active_transmembrane_transporter_activity,_and_Peptidase_M16,_N-terminal

description:
  Mixed, incl. Oxidoreduction-driven active transmembrane transporter activity, and Peptidase M16, N-terminal


id: CL:3776
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3776_Mixed,_incl._Oxidoreduction-driven_active_transmembrane_transporter_activity,_and_Peptidase_M16,_N-terminal

description:
  Mixed, incl. Oxidoreduction-driven active transmembrane transporter activity, and Peptidase M16, N-terminal


id: CL:3779
description: Oxidoreduction-driven active transmembrane transporter activity, and Peptidase M16, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3779_Oxidoreduction-driven_active_transmembrane_transporter_activity,_and_Peptidase_M16,_N-terminal


id: CL:3782
description: NADH dehydrogenase activity, and Homeobox
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3782_NADH_dehydrogenase_activity,_and_Homeobox


id: CL:3786
description: NADH dehydrogenase activity, and Homeobox
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3786_NADH_dehydrogenase_activity,_and_Homeobox


id: CL:3832
description: Cytochrome-c oxidase activity, and UbiA prenyltransferase conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3832_Cytochrome-c_oxidase_activity,_and_UbiA_prenyltransferase_conserved_site


id: CL:3871
description: RNA recognition motif, and Type I phosphodiesterase / nucleotide pyrophosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3871_RNA_recognition_motif,_and_Type_I_phosphodiesterase_/_nucleotide_pyrophosphatase


id: CL:3887
description: Mixed, incl. Lipid modification, and SNase-like, OB-fold superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3887_Mixed,_incl._Lipid_modification,_and_SNase-like,_OB-fold_superfamily


id: CL:389
description: Mixed, incl. Ycf66 protein N-terminus, and PsbQ-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:389_Mixed,_incl._Ycf66_protein_N-terminus,_and_PsbQ-like_domain_superfamily


id: CL:3896
description: Terpenoid backbone biosynthesis, and Ubiquinone and other terpenoid-quinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3896_Terpenoid_backbone_biosynthesis,_and_Ubiquinone_and_other_terpenoid-quinone_biosynthesis


id: CL:3897
description: Terpenoid backbone biosynthesis, and Squalene/phytoene synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3897_Terpenoid_backbone_biosynthesis,_and_Squalene/phytoene_synthase


id: CL:3899
description: Isoprenoid synthase domain superfamily, and Terpenoid backbone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3899_Isoprenoid_synthase_domain_superfamily,_and_Terpenoid_backbone_biosynthesis


id: CL:3918
description: Isopentenyl diphosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3918_Isopentenyl_diphosphate_metabolic_process


id: CL:3930
description: Ubiquinone and other terpenoid-quinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3930_Ubiquinone_and_other_terpenoid-quinone_biosynthesis


id: CL:3932
description: Ubiquinone and other terpenoid-quinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3932_Ubiquinone_and_other_terpenoid-quinone_biosynthesis


id: CL:3951
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3951_Mixed,_incl._Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_and_Ferric-uptake_regulator

description:
  Mixed, incl. Oxidoreductase activity, acting on a sulfur group of donors, and Ferric-uptake regulator


id: CL:3953
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3953_Mixed,_incl._Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_and_Ferric-uptake_regulator

description:
  Mixed, incl. Oxidoreductase activity, acting on a sulfur group of donors, and Ferric-uptake regulator


id: CL:3955
description: Mixed, incl. Ferric-uptake regulator, and Thioredoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3955_Mixed,_incl._Ferric-uptake_regulator,_and_Thioredoxin_domain


id: CL:3956
description: Ferric-uptake regulator, and Thioredoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3956_Ferric-uptake_regulator,_and_Thioredoxin_domain


id: CL:3959
description: Peroxiredoxin activity, and Thioredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3959_Peroxiredoxin_activity,_and_Thioredoxin


id: CL:3977
description: Mixed, incl. Rubredoxin, and Flavin reductase like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3977_Mixed,_incl._Rubredoxin,_and_Flavin_reductase_like_domain


id: CL:3996
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:3996_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor,_and_Thioredoxin,_conserved_site

description:
  Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor, and Thioredoxin, conserved site


id: CL:4016
description: Mixed, incl. Glycine biosynthetic process, and Flavoprotein-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4016_Mixed,_incl._Glycine_biosynthetic_process,_and_Flavoprotein-like_superfamily


id: CL:4028
description: Mixed, incl. Type 1 protein exporter, and CNNM, transmembrane domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4028_Mixed,_incl._Type_1_protein_exporter,_and_CNNM,_transmembrane_domain


id: CL:4029
description: Mixed, incl. Type 1 protein exporter, and DNA photolyase
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4029_Mixed,_incl._Type_1_protein_exporter,_and_DNA_photolyase


id: CL:4031
description: Mixed, incl. DNA photolyase, and Rhodanese Homology Domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4031_Mixed,_incl._DNA_photolyase,_and_Rhodanese_Homology_Domain


id: CL:4034
description: Rhodanese Homology Domain, and Cellular response to oxygen-containing compound
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4034_Rhodanese_Homology_Domain,_and_Cellular_response_to_oxygen-containing_compound


id: CL:404
description: Mixed, incl. Domain of unknown function DUF4388, and Translocation and assembly module TamB
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:404_Mixed,_incl._Domain_of_unknown_function_DUF4388,_and_Translocation_and_assembly_module_TamB


id: CL:4064
description: CNNM, transmembrane domain, and SNARE associated Golgi protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4064_CNNM,_transmembrane_domain,_and_SNARE_associated_Golgi_protein


id: CL:4075
description: Mixed, incl. Glutathione metabolism, and TAT protein transport complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4075_Mixed,_incl._Glutathione_metabolism,_and_TAT_protein_transport_complex


id: CL:4076
description: Glutathione metabolism, and Ketone catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4076_Glutathione_metabolism,_and_Ketone_catabolic_process


id: CL:4078
description: Glutathione metabolic process, and Ketone catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4078_Glutathione_metabolic_process,_and_Ketone_catabolic_process


id: CL:4080
description: Glutathione S-transferase, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4080_Glutathione_S-transferase,_N-terminal_domain


id: CL:4111
description: TAT protein transport complex, and Glutaredoxin, GrxC
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4111_TAT_protein_transport_complex,_and_Glutaredoxin,_GrxC


id: CL:4122
description: Mixed, incl. Sulfur metabolism, and Sulfur relay system
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4122_Mixed,_incl._Sulfur_metabolism,_and_Sulfur_relay_system


id: CL:4123
description: Mixed, incl. Sulfur relay system, and Iron-sulfur cluster assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4123_Mixed,_incl._Sulfur_relay_system,_and_Iron-sulfur_cluster_assembly


id: CL:4124
description: Prosthetic group metabolic process, and Thiamine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4124_Prosthetic_group_metabolic_process,_and_Thiamine_metabolic_process


id: CL:4125
description: Prosthetic group metabolic process, and Molybdate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4125_Prosthetic_group_metabolic_process,_and_Molybdate_ion_transport


id: CL:4128
description: Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4128_Prosthetic_group_metabolic_process


id: CL:4159
description: Iron-sulfur cluster assembly, and Aminotransferase class V domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4159_Iron-sulfur_cluster_assembly,_and_Aminotransferase_class_V_domain


id: CL:4161
description: Cysteine desulfurase, and Sulfur carrier activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4161_Cysteine_desulfurase,_and_Sulfur_carrier_activity


id: CL:4175
description: SUF system FeS cluster assembly, SufBD, and Aminotransferase class V domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4175_SUF_system_FeS_cluster_assembly,_SufBD,_and_Aminotransferase_class_V_domain


id: CL:418
description: Mostly uncharacterized, incl. Lipopolysaccharide metabolic process, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:418_Mostly_uncharacterized,_incl._Lipopolysaccharide_metabolic_process,_and_Signal


id: CL:419
description: Mostly uncharacterized, incl. Lipopolysaccharide metabolic process, and Cell adhesion
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:419_Mostly_uncharacterized,_incl._Lipopolysaccharide_metabolic_process,_and_Cell_adhesion


id: CL:4190
description: ABC-type sulfate transporter activity, and Thiosulphate/Sulfate-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4190_ABC-type_sulfate_transporter_activity,_and_Thiosulphate/Sulfate-binding_protein


id: CL:420
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:420_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF4359,_and_Type_II_protein_secretion_system_complex

description:
  Mostly uncharacterized, incl. Protein of unknown function DUF4359, and Type II protein secretion system complex


id: CL:4212
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4212_Cysteine_metabolic_process,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_iron-sulfur_protein_as_acceptor

description:
  Cysteine metabolic process, and Oxidoreductase activity, acting on a sulfur group of donors, iron-sulfur protein as acceptor


id: CL:4228
description: Mixed, incl. Chromosome partition, and Sister chromatid cohesion
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4228_Mixed,_incl._Chromosome_partition,_and_Sister_chromatid_cohesion


id: CL:4248
description: Mixed, incl. Cation transport, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4248_Mixed,_incl._Cation_transport,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:4249
description: Mixed, incl. Solute:cation antiporter activity, and Potassium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4249_Mixed,_incl._Solute:cation_antiporter_activity,_and_Potassium_ion_transport


id: CL:4251
description: Mixed, incl. Cation/H+ exchanger, and Potassium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4251_Mixed,_incl._Cation/H+_exchanger,_and_Potassium_ion_transport


id: CL:4253
description: Cation/H+ exchanger, and Potassium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4253_Cation/H+_exchanger,_and_Potassium_ion_transport


id: CL:4257
description: Cation/H+ exchanger, and TrkA-C domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4257_Cation/H+_exchanger,_and_TrkA-C_domain


id: CL:4260
description: Cation/H+ exchanger, and Chloride transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4260_Cation/H+_exchanger,_and_Chloride_transport


id: CL:4287
description: Mixed, incl. Mechanosensitive ion channel MscS, transmembrane-2, and RimK-like ATP-grasp domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4287_Mixed,_incl._Mechanosensitive_ion_channel_MscS,_transmembrane-2,_and_RimK-like_ATP-grasp_domain


id: CL:4310
description: Mixed, incl. HTH ArsR-type DNA-binding domain, and Copper ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4310_Mixed,_incl._HTH_ArsR-type_DNA-binding_domain,_and_Copper_ion_binding


id: CL:4311
description: Mixed, incl. HTH ArsR-type DNA-binding domain, and Copper ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4311_Mixed,_incl._HTH_ArsR-type_DNA-binding_domain,_and_Copper_ion_binding


id: CL:4312
description: Mixed, incl. Copper ion binding, and Cation efflux family
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4312_Mixed,_incl._Copper_ion_binding,_and_Cation_efflux_family


id: CL:4314
description: Cation efflux family, and Heavy-metal-associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4314_Cation_efflux_family,_and_Heavy-metal-associated_domain


id: CL:4330
description: Multicopper oxidases, conserved site, and Glutaredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4330_Multicopper_oxidases,_conserved_site,_and_Glutaredoxin


id: CL:434
description: Mixed, incl. Protein of unknown function DUF4359, and Type II protein secretion system complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:434_Mixed,_incl._Protein_of_unknown_function_DUF4359,_and_Type_II_protein_secretion_system_complex


id: CL:4342
description: HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4342_HTH_ArsR-type_DNA-binding_domain


id: CL:4352
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4352_Mixed,_incl._Citrate_transporter-like_domain,_and_Aspartyl/glutamyl-tRNA_amidotransferase_subunit_B-like

description:
  Mixed, incl. Citrate transporter-like domain, and Aspartyl/glutamyl-tRNA amidotransferase subunit B-like


id: CL:4364
description: Mixed, incl. Carbohydrate metabolic process, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4364_Mixed,_incl._Carbohydrate_metabolic_process,_and_Glycosyl_transferases_group_1


id: CL:4365
description: Mixed, incl. Polysaccharide metabolic process, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4365_Mixed,_incl._Polysaccharide_metabolic_process,_and_Glycosyl_transferases_group_1


id: CL:4366
description: Mixed, incl. Carbohydrate metabolic process, and RTX calcium-binding nonapeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4366_Mixed,_incl._Carbohydrate_metabolic_process,_and_RTX_calcium-binding_nonapeptide_repeat


id: CL:4368
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4368_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthetic_process


id: CL:4369
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4369_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthetic_process


id: CL:4370
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4370_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthetic_process


id: CL:4371
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4371_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthetic_process


id: CL:4373
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4373_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthetic_process


id: CL:4374
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Polysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4374_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_transport


id: CL:4375
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Polysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4375_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_transport


id: CL:4376
description: O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4376_O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthesis_protein


id: CL:4378
description: Mixed, incl. Polyketide sugar unit biosynthesis, and Nucleotide-sugar biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4378_Mixed,_incl._Polyketide_sugar_unit_biosynthesis,_and_Nucleotide-sugar_biosynthetic_process


id: CL:4381
description: Polyketide sugar unit biosynthesis, and dTDP-4-dehydrorhamnose 3,5-epimerase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4381_Polyketide_sugar_unit_biosynthesis,_and_dTDP-4-dehydrorhamnose_3,5-epimerase_activity


id: CL:4413
description: Polysaccharide transport, and Protein tyrosine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4413_Polysaccharide_transport,_and_Protein_tyrosine_kinase_activity


id: CL:4416
description: Polysaccharide export protein, and Exopolysaccharide synthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4416_Polysaccharide_export_protein,_and_Exopolysaccharide_synthesis_protein


id: CL:443
description: Mixed, incl. Lipopolysaccharide metabolic process, and Cell adhesion
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:443_Mixed,_incl._Lipopolysaccharide_metabolic_process,_and_Cell_adhesion


id: CL:4434
description: NADP+ binding, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4434_NADP+_binding,_and_Lipopolysaccharide_biosynthesis


id: CL:4435
description: Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4435_Lipopolysaccharide_biosynthesis


id: CL:4444
description: NADP+ binding, and RutC-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4444_NADP+_binding,_and_RutC-like_superfamily


id: CL:445
description: Mixed, incl. Cell adhesion, and Protein of unknown function DUF2808
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:445_Mixed,_incl._Cell_adhesion,_and_Protein_of_unknown_function_DUF2808


id: CL:4453
description: ABC transporter, teichoic acids export TagH-like, and ABC-2 type transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4453_ABC_transporter,_teichoic_acids_export_TagH-like,_and_ABC-2_type_transporter


id: CL:4455
description: ABC transporter, teichoic acids export TagH-like, and ABC-2 type transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4455_ABC_transporter,_teichoic_acids_export_TagH-like,_and_ABC-2_type_transporter


id: CL:4488
description: Mixed, incl. Lipid droplet, and UbiA prenyltransferase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4488_Mixed,_incl._Lipid_droplet,_and_UbiA_prenyltransferase_superfamily


id: CL:4490
description: Mixed, incl. UbiA prenyltransferase superfamily, and Prenyltransferase and squalene oxidase repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4490_Mixed,_incl._UbiA_prenyltransferase_superfamily,_and_Prenyltransferase_and_squalene_oxidase_repeat


id: CL:4512
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4512_Mixed,_incl._DegT/DnrJ/EryC1/StrS_aminotransferase_family,_and_Oxidoreductase_family,_C-terminal_alpha/beta_domain

description:
  Mixed, incl. DegT/DnrJ/EryC1/StrS aminotransferase family, and Oxidoreductase family, C-terminal alpha/beta domain


id: CL:4524
description: Mixed, incl. Hexapeptide transferase, conserved site, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4524_Mixed,_incl._Hexapeptide_transferase,_conserved_site,_and_Glycosyl_transferases_group_1


id: CL:4546
description: Mixed, incl. RTX calcium-binding nonapeptide repeat, and Sulfotransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4546_Mixed,_incl._RTX_calcium-binding_nonapeptide_repeat,_and_Sulfotransferase_domain


id: CL:4547
description: Mixed, incl. RTX calcium-binding nonapeptide repeat (4 copies), and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4547_Mixed,_incl._RTX_calcium-binding_nonapeptide_repeat_(4_copies),_and_Glycosyl_transferase_family_2


id: CL:4548
description: Mixed, incl. RTX calcium-binding nonapeptide repeat (4 copies), and Sulfotransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4548_Mixed,_incl._RTX_calcium-binding_nonapeptide_repeat_(4_copies),_and_Sulfotransferase_domain


id: CL:455
description: Lipopolysaccharide metabolic process, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:455_Lipopolysaccharide_metabolic_process,_and_Signal


id: CL:4550
description: Mixed, incl. RTX calcium-binding nonapeptide repeat (4 copies), and FG-GAP repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4550_Mixed,_incl._RTX_calcium-binding_nonapeptide_repeat_(4_copies),_and_FG-GAP_repeat


id: CL:4552
description: RTX calcium-binding nonapeptide repeat (4 copies), and FG-GAP repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4552_RTX_calcium-binding_nonapeptide_repeat_(4_copies),_and_FG-GAP_repeat


id: CL:4554
description: Cadherin-like domain, and RTX calcium-binding nonapeptide repeat (4 copies)
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4554_Cadherin-like_domain,_and_RTX_calcium-binding_nonapeptide_repeat_(4_copies)


id: CL:4577
description: Mixed, incl. Haemolysin activator HlyB, C-terminal, and Trigger factor/SurA domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4577_Mixed,_incl._Haemolysin_activator_HlyB,_C-terminal,_and_Trigger_factor/SurA_domain_superfamily


id: CL:4592
description: Mixed, incl. Sulfotransferase domain, and N-terminal domain of galactosyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4592_Mixed,_incl._Sulfotransferase_domain,_and_N-terminal_domain_of_galactosyltransferase


id: CL:4594
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4594_Mixed,_incl._N-terminal_domain_of_galactosyltransferase,_and_P-type_ATPase,_transmembrane_domain_superfamily

description:
  Mixed, incl. N-terminal domain of galactosyltransferase, and P-type ATPase, transmembrane domain superfamily


id: CL:4612
description: Mixed, incl. Sulfotransferase domain, and Type I phosphodiesterase / nucleotide pyrophosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4612_Mixed,_incl._Sulfotransferase_domain,_and_Type_I_phosphodiesterase_/_nucleotide_pyrophosphatase


id: CL:4624
description: Mixed, incl. Creatinine amidohydrolase, and GtrA-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4624_Mixed,_incl._Creatinine_amidohydrolase,_and_GtrA-like_protein


id: CL:4625
description: Mixed, incl. GtrA-like protein, and Glycosyltransferase RgtA/B/C/D-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4625_Mixed,_incl._GtrA-like_protein,_and_Glycosyltransferase_RgtA/B/C/D-like


id: CL:4638
description: Creatinine amidohydrolase, and Lactate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4638_Creatinine_amidohydrolase,_and_Lactate_catabolic_process


id: CL:465
description: Mixed, incl. Subtilase family, and Penicillinase repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:465_Mixed,_incl._Subtilase_family,_and_Penicillinase_repressor


id: CL:4655
description: Mixed, incl. Chromate transport, and RapA2, cadherin-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4655_Mixed,_incl._Chromate_transport,_and_RapA2,_cadherin-like_domain


id: CL:467
description: Mixed, incl. Subtilase family, and SH3-like domain, bacterial-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:467_Mixed,_incl._Subtilase_family,_and_SH3-like_domain,_bacterial-type


id: CL:4671
description: Mixed, incl. Metalloprotease TldD/E, central domain, and Polysaccharide biosynthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4671_Mixed,_incl._Metalloprotease_TldD/E,_central_domain,_and_Polysaccharide_biosynthesis_protein


id: CL:4685
description: Mixed, incl. Starch and sucrose metabolism, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4685_Mixed,_incl._Starch_and_sucrose_metabolism,_and_Bacterial_extracellular_solute-binding_protein


id: CL:4690
description: Glycogen metabolic process, and Carbohydrate phosphorylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4690_Glycogen_metabolic_process,_and_Carbohydrate_phosphorylase


id: CL:4692
description: Glycosyl hydrolase, all-beta, and Carbohydrate phosphorylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4692_Glycosyl_hydrolase,_all-beta,_and_Carbohydrate_phosphorylase


id: CL:4715
description: Sucrose metabolic process, and Carbohydrate kinase PfkB
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4715_Sucrose_metabolic_process,_and_Carbohydrate_kinase_PfkB


id: CL:4731
description: Mixed, incl. Bacterial extracellular solute-binding protein, and MalK, OB fold domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4731_Mixed,_incl._Bacterial_extracellular_solute-binding_protein,_and_MalK,_OB_fold_domain


id: CL:4733
description: MalK, OB fold domain, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4733_MalK,_OB_fold_domain,_and_Bacterial_extracellular_solute-binding_protein


id: CL:4754
description: Mixed, incl. Glycosyltransferase like family 2, and Coenzyme PQQ synthesis protein D
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4754_Mixed,_incl._Glycosyltransferase_like_family_2,_and_Coenzyme_PQQ_synthesis_protein_D


id: CL:4757
description: Glycosyltransferase like family 2, and Coenzyme PQQ synthesis protein D
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4757_Glycosyltransferase_like_family_2,_and_Coenzyme_PQQ_synthesis_protein_D


id: CL:4759
description: Glycosyltransferase like family 2, and Coenzyme PQQ synthesis protein D
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4759_Glycosyltransferase_like_family_2,_and_Coenzyme_PQQ_synthesis_protein_D


id: CL:4784
description: Mixed, incl. Enoyl-(Acyl carrier protein) reductase, and Type 1 protein exporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4784_Mixed,_incl._Enoyl-(Acyl_carrier_protein)_reductase,_and_Type_1_protein_exporter


id: CL:4798
description: Mixed, incl. AI-2E family transporter, and Glycerolipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4798_Mixed,_incl._AI-2E_family_transporter,_and_Glycerolipid_metabolism


id: CL:4799
description: Mixed, incl. Glycerolipid metabolism, and AI-2E family transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4799_Mixed,_incl._Glycerolipid_metabolism,_and_AI-2E_family_transporter


id: CL:4800
description: Mixed, incl. Glycerolipid metabolism, and Lactone catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4800_Mixed,_incl._Glycerolipid_metabolism,_and_Lactone_catabolic_process


id: CL:4802
description: Mixed, incl. AMP-binding, conserved site, and Aldo-keto reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4802_Mixed,_incl._AMP-binding,_conserved_site,_and_Aldo-keto_reductase


id: CL:4828
description: AI-2E family transporter, and Response to abiotic stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4828_AI-2E_family_transporter,_and_Response_to_abiotic_stimulus


id: CL:4844
description: AI-2E family transporter, and Transition metal ion transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4844_AI-2E_family_transporter,_and_Transition_metal_ion_transmembrane_transporter_activity


id: CL:4858
description: Porphyrin and chlorophyll metabolism, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4858_Porphyrin_and_chlorophyll_metabolism,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:4859
description: Porphyrin and chlorophyll metabolism, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4859_Porphyrin_and_chlorophyll_metabolism,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:4860
description: Porphyrin-containing compound metabolic process, and Cytochrome complex assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4860_Porphyrin-containing_compound_metabolic_process,_and_Cytochrome_complex_assembly


id: CL:4861
description: Heme biosynthetic process, and Iron storage
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4861_Heme_biosynthetic_process,_and_Iron_storage


id: CL:4863
description: Protoporphyrinogen IX metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4863_Protoporphyrinogen_IX_metabolic_process


id: CL:4865
description: Porphobilinogen synthase activity, and Aminotransferase class-III
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4865_Porphobilinogen_synthase_activity,_and_Aminotransferase_class-III


id: CL:4893
description: Mixed, incl. Iron storage, and Ferrochelatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4893_Mixed,_incl._Iron_storage,_and_Ferrochelatase


id: CL:4906
description: Chlorophyll metabolic process, and Prolycopene isomerase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4906_Chlorophyll_metabolic_process,_and_Prolycopene_isomerase-like


id: CL:4912
description: Nitrogenase/oxidoreductase, component 1, and Chlorophyll biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4912_Nitrogenase/oxidoreductase,_component_1,_and_Chlorophyll_biosynthesis


id: CL:4927
description: Ligase activity, forming nitrogen-metal bonds
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4927_Ligase_activity,_forming_nitrogen-metal_bonds


id: CL:493
description: Mixed, incl. Response to radiation, and Protein of unknown function DUF2993
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:493_Mixed,_incl._Response_to_radiation,_and_Protein_of_unknown_function_DUF2993


id: CL:4943
description: Cobalamin biosynthetic process, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4943_Cobalamin_biosynthetic_process,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:4951
description: Tetrapyrrole methylase, and Precorrin-8X methylmutase
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4951_Tetrapyrrole_methylase,_and_Precorrin-8X_methylmutase


id: CL:4967
description: Cobalamin biosynthesis, and Aminotransferases, class-I, pyridoxal-phosphate-binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4967_Cobalamin_biosynthesis,_and_Aminotransferases,_class-I,_pyridoxal-phosphate-binding_site


id: CL:4984
description: Cobalt ion transport, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:4984_Cobalt_ion_transport,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:5004
description: Mixed, incl. Phosphoglycerate mutase family, and RNA-binding S4 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5004_Mixed,_incl._Phosphoglycerate_mutase_family,_and_RNA-binding_S4_domain


id: CL:5014
description: Mixed, incl. Alpha/beta hydrolase fold-1, and Antibiotic biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5014_Mixed,_incl._Alpha/beta_hydrolase_fold-1,_and_Antibiotic_biosynthetic_process


id: CL:5016
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5016_Mixed,_incl._Alpha/beta_hydrolase_fold-1,_and_Oxidoreductase_activity,_acting_on_paired_donors,_with_oxidation_of_a_pair_of_donors_resulting_in_the_reduction_of_molecular_oxygen_to_two_molecules_of_water

description:
  Mixed, incl. Alpha/beta hydrolase fold-1, and Oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water


id: CL:5017
description: Mixed, incl. Alpha/beta hydrolase fold-1, and Chromate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5017_Mixed,_incl._Alpha/beta_hydrolase_fold-1,_and_Chromate_transport


id: CL:5018
description: Alpha/beta hydrolase fold-1, and Chromate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5018_Alpha/beta_hydrolase_fold-1,_and_Chromate_transport


id: CL:5039
description: Mixed, incl. Pseudouridine synthase, RsuA/RluB/E/F, and Cupin 2, conserved barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5039_Mixed,_incl._Pseudouridine_synthase,_RsuA/RluB/E/F,_and_Cupin_2,_conserved_barrel


id: CL:5048
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5048_Mixed,_incl._Oxidoreductase_activity,_acting_on_paired_donors,_with_oxidation_of_a_pair_of_donors_resulting_in_the_reduction_of_molecular_oxygen_to_two_molecules_of_water,_and_Peptidase_complex

description:
  Mixed, incl. Oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water, and Peptidase complex


id: CL:5067
description: Mostly uncharacterized, incl. Sulfate permease family, and Phosphate acyltransferases
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5067_Mostly_uncharacterized,_incl._Sulfate_permease_family,_and_Phosphate_acyltransferases


id: CL:5069
description: Mixed, incl. Phosphate acyltransferases, and Rieske [2Fe-2S] domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5069_Mixed,_incl._Phosphate_acyltransferases,_and_Rieske_[2Fe-2S]_domain


id: CL:508
description: Mixed, incl. tRNA wobble uridine modification, and Glycoside hydrolase family 57, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:508_Mixed,_incl._tRNA_wobble_uridine_modification,_and_Glycoside_hydrolase_family_57,_N-terminal_domain


id: CL:5095
description: Mixed, incl. Vitamin B6 metabolism, and Aldo/keto reductase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5095_Mixed,_incl._Vitamin_B6_metabolism,_and_Aldo/keto_reductase,_conserved_site


id: CL:5109
description: Mixed, incl. Aldo/keto reductase, conserved site, and Helix_turn_helix, cAMP Regulatory protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5109_Mixed,_incl._Aldo/keto_reductase,_conserved_site,_and_Helix_turn_helix,_cAMP_Regulatory_protein


id: CL:5120
description: Mixed, incl. Arsenite transport, and Ubiquitin-protein transferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5120_Mixed,_incl._Arsenite_transport,_and_Ubiquitin-protein_transferase_activity


id: CL:5132
description: Mixed, incl. Transposition, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5132_Mixed,_incl._Transposition,_and_DNA_integration


id: CL:5133
description: Mixed, incl. Transposition, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5133_Mixed,_incl._Transposition,_and_DNA_integration


id: CL:5134
description: Mixed, incl. Transposition, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5134_Mixed,_incl._Transposition,_and_DNA_integration


id: CL:5136
description: Mixed, incl. Transposition, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5136_Mixed,_incl._Transposition,_and_DNA_integration


id: CL:5137
description: Mixed, incl. Transposase activity, and DNA alkylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5137_Mixed,_incl._Transposase_activity,_and_DNA_alkylation


id: CL:5138
description: Mixed, incl. Transposase activity, and DNA alkylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5138_Mixed,_incl._Transposase_activity,_and_DNA_alkylation


id: CL:5140
description: Transposase activity, and Type I restriction enzyme R protein, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5140_Transposase_activity,_and_Type_I_restriction_enzyme_R_protein,_N-terminal_domain


id: CL:5142
description: Transposase activity, and Type I restriction enzyme R protein, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5142_Transposase_activity,_and_Type_I_restriction_enzyme_R_protein,_N-terminal_domain


id: CL:5143
description: Transposase activity, and DNA glycosylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5143_Transposase_activity,_and_DNA_glycosylase


id: CL:5152
description: Mixed, incl. Transposase, IS4-like, and Ribonuclease H-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5152_Mixed,_incl._Transposase,_IS4-like,_and_Ribonuclease_H-like_superfamily


id: CL:519
description: Mostly uncharacterized, incl. Protein of unknown function DUF4327, and Glycosyl hydrolase-like 10
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:519_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF4327,_and_Glycosyl_hydrolase-like_10


id: CL:5195
description: Restriction/modification DNA-methyltransferase, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5195_Restriction/modification_DNA-methyltransferase,_and_Transposase_activity


id: CL:520
description: Mixed, incl. Protein of unknown function DUF4327, and Glycosyl hydrolase-like 10
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:520_Mixed,_incl._Protein_of_unknown_function_DUF4327,_and_Glycosyl_hydrolase-like_10


id: CL:5204
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5204_Mixed,_incl._Rho_termination_factor,_N-terminal,_and_Type_I_restriction_enzyme_R_protein_N_terminus_(HSDR_N)

description:
  Mixed, incl. Rho termination factor, N-terminal, and Type I restriction enzyme R protein N terminus (HSDR_N)


id: CL:523
description: Mixed, incl. Protein of unknown function DUF4327, and Peptide binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:523_Mixed,_incl._Protein_of_unknown_function_DUF4327,_and_Peptide_binding


id: CL:5231
description: Mixed, incl. DNA methylase, and Domain of unknown function DUF1524
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5231_Mixed,_incl._DNA_methylase,_and_Domain_of_unknown_function_DUF1524


id: CL:5233
description: DNA methylase, and Domain of unknown function DUF1524
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5233_DNA_methylase,_and_Domain_of_unknown_function_DUF1524


id: CL:5255
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5255_Mixed,_incl._Pfam_phage_integrase_family,_and_PIN_family,_putative_toxin-antitoxin_system_toxin_component

description:
  Mixed, incl. Pfam phage integrase family, and PIN family, putative toxin-antitoxin system toxin component


id: CL:5257
description: Mixed, incl. PIN family, putative toxin-antitoxin system toxin component
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5257_Mixed,_incl._PIN_family,_putative_toxin-antitoxin_system_toxin_component


id: CL:5280
description: Mixed, incl. DNA integration, and Bacterial TniB
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5280_Mixed,_incl._DNA_integration,_and_Bacterial_TniB


id: CL:5281
description: Mixed, incl. DNA integration, and Bacterial TniB
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5281_Mixed,_incl._DNA_integration,_and_Bacterial_TniB


id: CL:5282
description: Mixed, incl. DNA integration, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5282_Mixed,_incl._DNA_integration,_and_AAA_domain


id: CL:5285
description: DNA integration, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5285_DNA_integration,_and_AAA_domain


id: CL:5310
description: Bacterial TniB protein, and Transposase, Mu, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5310_Bacterial_TniB_protein,_and_Transposase,_Mu,_C-terminal


id: CL:5324
description: Mixed, incl. Tn7-like transposition protein D, and Group II intron, maturase-specific
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5324_Mixed,_incl._Tn7-like_transposition_protein_D,_and_Group_II_intron,_maturase-specific


id: CL:5327
description: Tn7-like transposition protein D, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5327_Tn7-like_transposition_protein_D,_and_AAA_domain


id: CL:536
description: Mixed, incl. Pentapeptide repeats (8 copies), and Tetrapyrrole binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:536_Mixed,_incl._Pentapeptide_repeats_(8_copies),_and_Tetrapyrrole_binding


id: CL:5360
description: Mixed, incl. OmpA family, and DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5360_Mixed,_incl._OmpA_family,_and_DDE_transposase_sub-family


id: CL:5374
description: Mixed, incl. Methyltransferase type 11, and Monooxygenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5374_Mixed,_incl._Methyltransferase_type_11,_and_Monooxygenase_activity


id: CL:5375
description: Mostly uncharacterized, incl. Naphthalene degradation, and Nodulation protein S (NodS)
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5375_Mostly_uncharacterized,_incl._Naphthalene_degradation,_and_Nodulation_protein_S_(NodS)


id: CL:5376
description: Mixed, incl. Naphthalene degradation, and Fatty acid desaturase
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5376_Mixed,_incl._Naphthalene_degradation,_and_Fatty_acid_desaturase


id: CL:5387
description: Mixed, incl. Nodulation protein S (NodS), and Histone-like DNA-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5387_Mixed,_incl._Nodulation_protein_S_(NodS),_and_Histone-like_DNA-binding_protein


id: CL:5398
description: Mixed, incl. Regulation of hydrolase activity, and Galactose mutarotase-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5398_Mixed,_incl._Regulation_of_hydrolase_activity,_and_Galactose_mutarotase-like_domain_superfamily


id: CL:5415
description: Mixed, incl. Toxin-antitoxin complex, and Putative restriction endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5415_Mixed,_incl._Toxin-antitoxin_complex,_and_Putative_restriction_endonuclease


id: CL:5416
description: Mixed, incl. Toxin-antitoxin complex, and Protein glycosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5416_Mixed,_incl._Toxin-antitoxin_complex,_and_Protein_glycosylation


id: CL:5417
description: Mixed, incl. Toxin-antitoxin complex, and Protein glycosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5417_Mixed,_incl._Toxin-antitoxin_complex,_and_Protein_glycosylation


id: CL:5418
description: Mixed, incl. Toxin-antitoxin complex, and Protein glycosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5418_Mixed,_incl._Toxin-antitoxin_complex,_and_Protein_glycosylation


id: CL:5419
description: Mixed, incl. Toxin-antitoxin complex, and Protein glycosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5419_Mixed,_incl._Toxin-antitoxin_complex,_and_Protein_glycosylation


id: CL:5420
description: Mixed, incl. HicB-like antitoxin of toxin-antitoxin system, and Protein glycosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5420_Mixed,_incl._HicB-like_antitoxin_of_toxin-antitoxin_system,_and_Protein_glycosylation


id: CL:5422
description: HicB-like antitoxin of toxin-antitoxin system, and HicA superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5422_HicB-like_antitoxin_of_toxin-antitoxin_system,_and_HicA_superfamily


id: CL:5439
description: Mixed, incl. Toxin YoeB, and SpoVT / AbrB like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5439_Mixed,_incl._Toxin_YoeB,_and_SpoVT_/_AbrB_like_domain


id: CL:5453
description: Mixed, incl. Ribonuclease toxin BrnT superfamily, and HicA superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5453_Mixed,_incl._Ribonuclease_toxin_BrnT_superfamily,_and_HicA_superfamily


id: CL:5464
description: Mostly uncharacterized, incl. TTHA1013/TTHA0281-like, and DNA synthesis involved in DNA repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5464_Mostly_uncharacterized,_incl._TTHA1013/TTHA0281-like,_and_DNA_synthesis_involved_in_DNA_repair


id: CL:5466
description: Mixed, incl. DNA synthesis involved in DNA repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5466_Mixed,_incl._DNA_synthesis_involved_in_DNA_repair


id: CL:547
description: Mixed, incl. Forkhead associated domain, and Heme catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:547_Mixed,_incl._Forkhead_associated_domain,_and_Heme_catabolic_process


id: CL:5482
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5482_Mixed,_incl._ParE_toxin_of_type_II_toxin-antitoxin_system,_parDE,_and_Domain_of_unknown_function_DUF262

description:
  Mixed, incl. ParE toxin of type II toxin-antitoxin system, parDE, and Domain of unknown function DUF262


id: CL:549
description: Mixed, incl. Heme catabolic process, and Protein of unknown function DUF928
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:549_Mixed,_incl._Heme_catabolic_process,_and_Protein_of_unknown_function_DUF928


id: CL:5495
description: Mixed, incl. Protein glycosylation, and Tc1-like transposase, DDE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5495_Mixed,_incl._Protein_glycosylation,_and_Tc1-like_transposase,_DDE_domain


id: CL:5496
description: Mixed, incl. Tc1-like transposase, DDE domain, and PIN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5496_Mixed,_incl._Tc1-like_transposase,_DDE_domain,_and_PIN_domain


id: CL:5507
description: Mixed, incl. Protein glycosylation, and Glycosyl hydrolase-like 10
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5507_Mixed,_incl._Protein_glycosylation,_and_Glycosyl_hydrolase-like_10


id: CL:5518
description: Mixed, incl. ABC-2 type transporter, and Short-chain dehydrogenase/reductase SDR
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5518_Mixed,_incl._ABC-2_type_transporter,_and_Short-chain_dehydrogenase/reductase_SDR


id: CL:5519
description: Mixed, incl. ABC-2 type transporter, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5519_Mixed,_incl._ABC-2_type_transporter,_and_ABC-2_family_transporter_protein


id: CL:5520
description: Mixed, incl. ABC-2 family transporter protein, and ABC-2 type transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5520_Mixed,_incl._ABC-2_family_transporter_protein,_and_ABC-2_type_transporter


id: CL:5521
description: Mixed, incl. ABC-2 type transporter, and Response to herbicide
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5521_Mixed,_incl._ABC-2_type_transporter,_and_Response_to_herbicide


id: CL:5532
description: Mixed, incl. ABC-2 family transporter protein, and Class I glutamine amidotransferase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5532_Mixed,_incl._ABC-2_family_transporter_protein,_and_Class_I_glutamine_amidotransferase-like


id: CL:5543
description: ABC-2 family transporter protein, and mRNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5543_ABC-2_family_transporter_protein,_and_mRNA_binding


id: CL:5553
description: Mixed, incl. KR domain, and Heme catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5553_Mixed,_incl._KR_domain,_and_Heme_catabolic_process


id: CL:5569
description: Mixed, incl. Putative restriction endonuclease, and Toxin-antitoxin complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5569_Mixed,_incl._Putative_restriction_endonuclease,_and_Toxin-antitoxin_complex


id: CL:5570
description: Mixed, incl. Putative restriction endonuclease, and mRNA interferase PemK-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5570_Mixed,_incl._Putative_restriction_endonuclease,_and_mRNA_interferase_PemK-like


id: CL:5571
description: Mixed, incl. Putative restriction endonuclease, and PIN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5571_Mixed,_incl._Putative_restriction_endonuclease,_and_PIN_domain


id: CL:5572
description: Mixed, incl. Putative restriction endonuclease, and Glycosyl hydrolase family 57
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5572_Mixed,_incl._Putative_restriction_endonuclease,_and_Glycosyl_hydrolase_family_57


id: CL:5574
description: Putative restriction endonuclease, and Glycosyl hydrolase family 57
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5574_Putative_restriction_endonuclease,_and_Glycosyl_hydrolase_family_57


id: CL:5577
description: Putative restriction endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5577_Putative_restriction_endonuclease


id: CL:5579
description: Putative restriction endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5579_Putative_restriction_endonuclease


id: CL:5622
description: Mixed, incl. PIN domain, and TTHA1013/TTHA0281-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5622_Mixed,_incl._PIN_domain,_and_TTHA1013/TTHA0281-like


id: CL:563
description: Mixed, incl. Domain of unknown function DUF4388, and Late competence development protein ComFB
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:563_Mixed,_incl._Domain_of_unknown_function_DUF4388,_and_Late_competence_development_protein_ComFB


id: CL:5640
description: Mixed, incl. mRNA interferase PemK-like, and Cro/C1-type helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5640_Mixed,_incl._mRNA_interferase_PemK-like,_and_Cro/C1-type_helix-turn-helix_domain


id: CL:5641
description: Mixed, incl. Cro/C1-type helix-turn-helix domain, and Response to hypoxia
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5641_Mixed,_incl._Cro/C1-type_helix-turn-helix_domain,_and_Response_to_hypoxia


id: CL:5643
description: Mixed, incl. Response to hypoxia, and mRNA interferase PemK-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5643_Mixed,_incl._Response_to_hypoxia,_and_mRNA_interferase_PemK-like


id: CL:5662
description: Mixed, incl. mRNA interferase PemK-like, and SpoVT / AbrB like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5662_Mixed,_incl._mRNA_interferase_PemK-like,_and_SpoVT_/_AbrB_like_domain


id: CL:5674
description: Mixed, incl. LysR, substrate-binding, and EamA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5674_Mixed,_incl._LysR,_substrate-binding,_and_EamA_domain


id: CL:5686
description: Mixed, incl. Response to virus, and Ribonuclease HepT-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5686_Mixed,_incl._Response_to_virus,_and_Ribonuclease_HepT-like


id: CL:5687
description: Mixed, incl. Response to virus, and Ribonuclease HepT-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5687_Mixed,_incl._Response_to_virus,_and_Ribonuclease_HepT-like


id: CL:5688
description: Mixed, incl. Ribonuclease HepT-like, and Nucleotidyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5688_Mixed,_incl._Ribonuclease_HepT-like,_and_Nucleotidyltransferase_domain


id: CL:5689
description: Mixed, incl. Response to virus, and WYL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5689_Mixed,_incl._Response_to_virus,_and_WYL_domain


id: CL:5691
description: Mixed, incl. WYL domain, and Nucleotide-excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5691_Mixed,_incl._WYL_domain,_and_Nucleotide-excision_repair


id: CL:5714
description: Ribonuclease HepT-like, and Nucleotidyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5714_Ribonuclease_HepT-like,_and_Nucleotidyltransferase_domain


id: CL:5716
description: Ribonuclease HepT-like, and Polymerase, nucleotidyl transferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5716_Ribonuclease_HepT-like,_and_Polymerase,_nucleotidyl_transferase_domain


id: CL:572
description: Mixed, incl. WD40-like beta propeller, and Ycf66 protein N-terminus
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:572_Mixed,_incl._WD40-like_beta_propeller,_and_Ycf66_protein_N-terminus


id: CL:5733
description: Mixed, incl. Response to virus, and cas1 solo endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5733_Mixed,_incl._Response_to_virus,_and_cas1_solo_endonuclease


id: CL:574
description: Mixed, incl. WD40-like beta propeller, and Ycf66 protein N-terminus
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:574_Mixed,_incl._WD40-like_beta_propeller,_and_Ycf66_protein_N-terminus


id: CL:5752
description: Mixed, incl. ABC transporter, TroCD-like, and Zinc-uptake complex component A periplasmic
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5752_Mixed,_incl._ABC_transporter,_TroCD-like,_and_Zinc-uptake_complex_component_A_periplasmic


id: CL:5754
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5754_Mixed,_incl._2-oxoglutarate-dependent_dioxygenase_activity,_and_DNA_synthesis_involved_in_DNA_repair

description:
  Mixed, incl. 2-oxoglutarate-dependent dioxygenase activity, and DNA synthesis involved in DNA repair


id: CL:5770
description: ABC transporter, TroCD-like, and Zinc-uptake complex component A periplasmic
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5770_ABC_transporter,_TroCD-like,_and_Zinc-uptake_complex_component_A_periplasmic


id: CL:5783
description: Mixed, incl. Transposase activity, and tRNA threonylcarbamoyladenosine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5783_Mixed,_incl._Transposase_activity,_and_tRNA_threonylcarbamoyladenosine_modification


id: CL:5785
description: Mixed, incl. Transposase, IS1, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5785_Mixed,_incl._Transposase,_IS1,_and_Transposase_activity


id: CL:5786
description: Transposase, IS1, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5786_Transposase,_IS1,_and_Transposase_activity


id: CL:5787
description: Transposase, IS1, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5787_Transposase,_IS1,_and_Transposase_activity


id: CL:5789
description: Transposase, IS1, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5789_Transposase,_IS1,_and_Transposase_activity


id: CL:5791
description: Transposase, IS1, and Homeobox-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5791_Transposase,_IS1,_and_Homeobox-like_domain_superfamily


id: CL:5817
description: Mixed, incl. ParB/Sulfiredoxin superfamily, and Transposase, IS1
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5817_Mixed,_incl._ParB/Sulfiredoxin_superfamily,_and_Transposase,_IS1


id: CL:5829
description: Mixed, incl. dGTP metabolic process, and Extracellular ligand-gated ion channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5829_Mixed,_incl._dGTP_metabolic_process,_and_Extracellular_ligand-gated_ion_channel_activity


id: CL:5842
description: Mixed, incl. Coenzyme F420 binding, and DNA-binding HTH domain, TetR-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5842_Mixed,_incl._Coenzyme_F420_binding,_and_DNA-binding_HTH_domain,_TetR-type


id: CL:5856
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Telomere recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5856_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Telomere_recombination


id: CL:5857
description: Mixed, incl. Protein dephosphorylation, and Aminoacyl-tRNA synthetase, class I, anticodon-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5857_Mixed,_incl._Protein_dephosphorylation,_and_Aminoacyl-tRNA_synthetase,_class_I,_anticodon-binding


id: CL:5859
description: Protein dephosphorylation, and Calx-beta domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5859_Protein_dephosphorylation,_and_Calx-beta_domain


id: CL:5879
description: tRNA threonylcarbamoyladenosine modification, and Lipopolysaccharide core region metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5879_tRNA_threonylcarbamoyladenosine_modification,_and_Lipopolysaccharide_core_region_metabolic_process


id: CL:588
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:588_Mixed,_incl._Protein_of_unknown_function_DUF4359,_and_Glutamate/phenylalanine/leucine/valine/L-tryptophan_dehydrogenase,_C-terminal

description:
  Mixed, incl. Protein of unknown function DUF4359, and Glutamate/phenylalanine/leucine/valine/L-tryptophan dehydrogenase, C-terminal


id: CL:5894
description: Mixed, incl. Pentapeptide repeat, and Carboxysome
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5894_Mixed,_incl._Pentapeptide_repeat,_and_Carboxysome


id: CL:5895
description: Mixed, incl. Pentapeptide repeat, and EamA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5895_Mixed,_incl._Pentapeptide_repeat,_and_EamA_domain


id: CL:5897
description: Pentapeptide repeat, and MerR HTH family regulatory protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5897_Pentapeptide_repeat,_and_MerR_HTH_family_regulatory_protein


id: CL:5947
description: Mixed, incl. Pentapeptide repeats (8 copies), and MerR HTH family regulatory protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5947_Mixed,_incl._Pentapeptide_repeats_(8_copies),_and_MerR_HTH_family_regulatory_protein


id: CL:5948
description: Mixed, incl. MerR HTH family regulatory protein, and Von Willebrand factor, type A
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5948_Mixed,_incl._MerR_HTH_family_regulatory_protein,_and_Von_Willebrand_factor,_type_A


id: CL:5961
description: DDE transposase sub-family, and Pentapeptide repeats (8 copies)
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5961_DDE_transposase_sub-family,_and_Pentapeptide_repeats_(8_copies)


id: CL:597
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:597_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF2993,_and_Cyclic_nucleotide-monophosphate_binding_domain

description:
  Mostly uncharacterized, incl. Protein of unknown function DUF2993, and Cyclic nucleotide-monophosphate binding domain


id: CL:598
description: Mostly uncharacterized, incl. Protein of unknown function DUF2993, and Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:598_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF2993,_and_Chromosome_segregation


id: CL:5981
description: Carboxysome, and Glyoxylate and dicarboxylate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5981_Carboxysome,_and_Glyoxylate_and_dicarboxylate_metabolism


id: CL:5982
description: Carboxysome, and Carbonic anhydrase
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5982_Carboxysome,_and_Carbonic_anhydrase


id: CL:5983
description: Mixed, incl. Carboxysome, and Carbonic anhydrase
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5983_Mixed,_incl._Carboxysome,_and_Carbonic_anhydrase


id: CL:5985
description: Ribulose-bisphosphate carboxylase activity, and LysR, substrate-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5985_Ribulose-bisphosphate_carboxylase_activity,_and_LysR,_substrate-binding


id: CL:599
description: Mostly uncharacterized, incl. Protein of unknown function DUF2993, and DICT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:599_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF2993,_and_DICT_domain


id: CL:5998
description: Carbonic anhydrase, and Hexapeptide repeat of succinyl-transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:5998_Carbonic_anhydrase,_and_Hexapeptide_repeat_of_succinyl-transferase


id: CL:600
description: Mostly uncharacterized, incl. Protein of unknown function DUF2993, and DICT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:600_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF2993,_and_DICT_domain


id: CL:6009
description: CcmK-like superfamily, and Pentapeptide repeats (9 copies)
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6009_CcmK-like_superfamily,_and_Pentapeptide_repeats_(9_copies)


id: CL:601
description: Mostly uncharacterized, incl. Glycosyl hydrolase-like 10, and HEAT repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:601_Mostly_uncharacterized,_incl._Glycosyl_hydrolase-like_10,_and_HEAT_repeats


id: CL:6024
description: FAD-linked oxidase-like, C-terminal, and HAD hydrolase, subfamily IA
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6024_FAD-linked_oxidase-like,_C-terminal,_and_HAD_hydrolase,_subfamily_IA


id: CL:603
description: Mixed, incl. Glycosyl hydrolase-like 10, and HEAT repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:603_Mixed,_incl._Glycosyl_hydrolase-like_10,_and_HEAT_repeats


id: CL:604
description: Mixed, incl. Regulation of cell shape
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:604_Mixed,_incl._Regulation_of_cell_shape


id: CL:6043
description: Mixed, incl. Cysteine and methionine metabolism, and Ureohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6043_Mixed,_incl._Cysteine_and_methionine_metabolism,_and_Ureohydrolase


id: CL:6044
description: Mixed, incl. Cysteine and methionine metabolism, and Ureohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6044_Mixed,_incl._Cysteine_and_methionine_metabolism,_and_Ureohydrolase


id: CL:6045
description: Mixed, incl. DNA methylation on cytosine, and Polyamine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6045_Mixed,_incl._DNA_methylation_on_cytosine,_and_Polyamine_biosynthesis


id: CL:6046
description: Mixed, incl. DNA methylation on cytosine, and Polyamine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6046_Mixed,_incl._DNA_methylation_on_cytosine,_and_Polyamine_biosynthesis


id: CL:6048
description: Polyamine biosynthesis, and DNA methylation on cytosine
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6048_Polyamine_biosynthesis,_and_DNA_methylation_on_cytosine


id: CL:6062
description: Mixed, incl. DNA methylase, C-5 cytosine-specific, conserved site, and Homeodomain-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6062_Mixed,_incl._DNA_methylase,_C-5_cytosine-specific,_conserved_site,_and_Homeodomain-like_domain


id: CL:6075
description: Ureohydrolase, and Arginine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6075_Ureohydrolase,_and_Arginine_catabolic_process


id: CL:6098
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6098_Mixed,_incl._Domain_of_unknown_function_DUF1524,_and_PIN_family,_putative_toxin-antitoxin_system_toxin_component

description:
  Mixed, incl. Domain of unknown function DUF1524, and PIN family, putative toxin-antitoxin system toxin component


id: CL:6110
description: Mixed, incl. Nitrate import, and Cadmium resistance transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6110_Mixed,_incl._Nitrate_import,_and_Cadmium_resistance_transporter


id: CL:6111
description: Nitrate import, and NMT1-like family
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6111_Nitrate_import,_and_NMT1-like_family


id: CL:6113
description: Nitrate import, and NMT1-like family
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6113_Nitrate_import,_and_NMT1-like_family


id: CL:6115
description: Nitrate transmembrane transporter activity, and NMT1-like family
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6115_Nitrate_transmembrane_transporter_activity,_and_NMT1-like_family


id: CL:613
description: Mixed, incl. Glycosyl hydrolase-like 10, and HEAT repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:613_Mixed,_incl._Glycosyl_hydrolase-like_10,_and_HEAT_repeats


id: CL:6146
description: Mixed, incl. Cadmium resistance transporter, and NIL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6146_Mixed,_incl._Cadmium_resistance_transporter,_and_NIL_domain


id: CL:6148
description: Mixed, incl. Domain of unknown function DUF202, and Helix_turn_helix, cAMP Regulatory protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6148_Mixed,_incl._Domain_of_unknown_function_DUF202,_and_Helix_turn_helix,_cAMP_Regulatory_protein


id: CL:6160
description: Cadmium resistance transporter, and NIL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6160_Cadmium_resistance_transporter,_and_NIL_domain


id: CL:6169
description: Mixed, incl. Acetyltransferase activity, and Hydrolase activity, acting on glycosyl bonds
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6169_Mixed,_incl._Acetyltransferase_activity,_and_Hydrolase_activity,_acting_on_glycosyl_bonds


id: CL:6170
description: Mixed, incl. Acetyltransferase activity, and Gas transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6170_Mixed,_incl._Acetyltransferase_activity,_and_Gas_transport


id: CL:6172
description: Mixed, incl. Acetyltransferase (GNAT) domain, and HNH endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6172_Mixed,_incl._Acetyltransferase_(GNAT)_domain,_and_HNH_endonuclease


id: CL:6191
description: Mixed, incl. Gas transport, and Protein-exporting ATPase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6191_Mixed,_incl._Gas_transport,_and_Protein-exporting_ATPase_activity


id: CL:6201
description: Mixed, incl. Peptidoglycan turnover, and Hydrolase activity, hydrolyzing N-glycosyl compounds
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6201_Mixed,_incl._Peptidoglycan_turnover,_and_Hydrolase_activity,_hydrolyzing_N-glycosyl_compounds


id: CL:6211
description: Mixed, incl. Site of DNA damage, and Low amplitude and bright protein LabA
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6211_Mixed,_incl._Site_of_DNA_damage,_and_Low_amplitude_and_bright_protein_LabA


id: CL:6221
description: Mixed, incl. ABC1 atypical kinase-like domain, and Mitochondrial biogenesis AIM24
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6221_Mixed,_incl._ABC1_atypical_kinase-like_domain,_and_Mitochondrial_biogenesis_AIM24


id: CL:6222
description: Mixed, incl. ABC1 atypical kinase-like domain, and Peptidase S49
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6222_Mixed,_incl._ABC1_atypical_kinase-like_domain,_and_Peptidase_S49


id: CL:6224
description: Mixed, incl. ABC1 atypical kinase-like domain, and Peptidase S49
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6224_Mixed,_incl._ABC1_atypical_kinase-like_domain,_and_Peptidase_S49


id: CL:6242
description: Mixed, incl. Multicellular organismal process, and Ubiquinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6242_Mixed,_incl._Multicellular_organismal_process,_and_Ubiquinone_metabolic_process


id: CL:6253
description: Mixed, incl. Mitochondrial biogenesis AIM24, and Thioesterase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6253_Mixed,_incl._Mitochondrial_biogenesis_AIM24,_and_Thioesterase_superfamily


id: CL:6255
description: Mitochondrial biogenesis AIM24, and Peptidase M48
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6255_Mitochondrial_biogenesis_AIM24,_and_Peptidase_M48


id: CL:6267
description: Thioesterase superfamily, and Multicellular organismal process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6267_Thioesterase_superfamily,_and_Multicellular_organismal_process


id: CL:6276
description: Mixed, incl. ABC transporters, and Nickel cation binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6276_Mixed,_incl._ABC_transporters,_and_Nickel_cation_binding


id: CL:6277
description: Mixed, incl. Nickel cation binding, and Amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6277_Mixed,_incl._Nickel_cation_binding,_and_Amino_acid_transport


id: CL:6279
description: Mixed, incl. Nickel cation binding, and Amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6279_Mixed,_incl._Nickel_cation_binding,_and_Amino_acid_transport


id: CL:6280
description: Nickel cation binding, and ATPase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6280_Nickel_cation_binding,_and_ATPase_complex


id: CL:6281
description: Protein maturation, and Homeobox
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6281_Protein_maturation,_and_Homeobox


id: CL:6283
description: Mixed, incl. ATPase complex, and GTPase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6283_Mixed,_incl._ATPase_complex,_and_GTPase_complex


id: CL:630
description: Mixed, incl. Protein of unknown function DUF2993, and DICT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:630_Mixed,_incl._Protein_of_unknown_function_DUF2993,_and_DICT_domain


id: CL:6304
description: Urea metabolic process, and Nickel insertion
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6304_Urea_metabolic_process,_and_Nickel_insertion


id: CL:6317
description: Amino acid transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6317_Amino_acid_transport,_and_ABC_transporter,_permease


id: CL:6319
description: ABC transporter, permease, and Periplasmic binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6319_ABC_transporter,_permease,_and_Periplasmic_binding_protein_domain


id: CL:632
description: Mixed, incl. Translation initiation factor activity, and Helicase/UvrB, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:632_Mixed,_incl._Translation_initiation_factor_activity,_and_Helicase/UvrB,_N-terminal


id: CL:6320
description: ABC transporter, permease, and Periplasmic binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6320_ABC_transporter,_permease,_and_Periplasmic_binding_protein_domain


id: CL:6329
description: ABC transporter, permease, and Periplasmic binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6329_ABC_transporter,_permease,_and_Periplasmic_binding_protein_domain


id: CL:6380
description: Mixed, incl. Phosphate ion transport, and Radical SAM, alpha/beta horseshoe
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6380_Mixed,_incl._Phosphate_ion_transport,_and_Radical_SAM,_alpha/beta_horseshoe


id: CL:6405
description: Mixed, incl. Radical SAM, alpha/beta horseshoe, and Polyphosphate kinase 2 (PPK2)
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6405_Mixed,_incl._Radical_SAM,_alpha/beta_horseshoe,_and_Polyphosphate_kinase_2_(PPK2)


id: CL:6406
description: Domain of unknown function DUF4070, and Lipoprotein metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6406_Domain_of_unknown_function_DUF4070,_and_Lipoprotein_metabolic_process


id: CL:6415
description: Mixed, incl. Polyphosphate kinase 2 (PPK2), and Phospholipase D/Transphosphatidylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6415_Mixed,_incl._Polyphosphate_kinase_2_(PPK2),_and_Phospholipase_D/Transphosphatidylase


id: CL:6427
description: Mostly uncharacterized, incl. SNARE associated Golgi protein, and Carboxypeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6427_Mostly_uncharacterized,_incl._SNARE_associated_Golgi_protein,_and_Carboxypeptidase


id: CL:6428
description: Mixed, incl. Carboxypeptidase, and Transmembrane protein TMEM64
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6428_Mixed,_incl._Carboxypeptidase,_and_Transmembrane_protein_TMEM64


id: CL:6429
description: Mixed, incl. Peptidase M15B, and Transmembrane protein TMEM64
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6429_Mixed,_incl._Peptidase_M15B,_and_Transmembrane_protein_TMEM64


id: CL:6433
description: Mixed, incl. 4Fe-4S single cluster domain, and Transmembrane protein TMEM64
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6433_Mixed,_incl._4Fe-4S_single_cluster_domain,_and_Transmembrane_protein_TMEM64


id: CL:6454
description: Mixed, incl. PGBD superfamily, and KGK domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6454_Mixed,_incl._PGBD_superfamily,_and_KGK_domain


id: CL:6455
description: Mixed, incl. PGBD superfamily, and KGK domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6455_Mixed,_incl._PGBD_superfamily,_and_KGK_domain


id: CL:6468
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6468_Mixed,_incl._START-like_domain_superfamily,_and_3-beta_hydroxysteroid_dehydrogenase/isomerase_family

description:
  Mixed, incl. START-like domain superfamily, and 3-beta hydroxysteroid dehydrogenase/isomerase family


id: CL:6477
description: Mostly uncharacterized, incl. GMP biosynthetic process, and CorA, cytoplasmic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6477_Mostly_uncharacterized,_incl._GMP_biosynthetic_process,_and_CorA,_cytoplasmic_domain


id: CL:6480
description: Mixed, incl. GMP biosynthetic process, and Galactosyltransferase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6480_Mixed,_incl._GMP_biosynthetic_process,_and_Galactosyltransferase,_C-terminal


id: CL:6502
description: Mostly uncharacterized, incl. Peptidase M20, and PurE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6502_Mostly_uncharacterized,_incl._Peptidase_M20,_and_PurE_domain


id: CL:6503
description: Mostly uncharacterized, incl. PurE domain, and NAD synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6503_Mostly_uncharacterized,_incl._PurE_domain,_and_NAD_synthase


id: CL:6505
description: Mixed, incl. PurE domain, and NAD synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6505_Mixed,_incl._PurE_domain,_and_NAD_synthase


id: CL:6519
description: Mixed, incl. Cyclase activity, and Metal dependent phosphohydrolases with conserved HD motif.
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6519_Mixed,_incl._Cyclase_activity,_and_Metal_dependent_phosphohydrolases_with_conserved_HD_motif.


id: CL:652
description: Mostly uncharacterized, incl. Phycobilisome degradation protein NblA
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:652_Mostly_uncharacterized,_incl._Phycobilisome_degradation_protein_NblA


id: CL:6531
description: Mixed, incl. Dioxygenase, and Pentapeptide repeats (8 copies)
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6531_Mixed,_incl._Dioxygenase,_and_Pentapeptide_repeats_(8_copies)


id: CL:6549
description: Mixed, incl. ApaLI-like restriction endonuclease, and Purine-containing compound catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6549_Mixed,_incl._ApaLI-like_restriction_endonuclease,_and_Purine-containing_compound_catabolic_process


id: CL:6551
description: ApaLI-like restriction endonuclease, and TTHA1013/TTHA0281-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6551_ApaLI-like_restriction_endonuclease,_and_TTHA1013/TTHA0281-like


id: CL:6569
description: Mixed, incl. AhpC/TSA family, and Histone-like DNA-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6569_Mixed,_incl._AhpC/TSA_family,_and_Histone-like_DNA-binding_protein


id: CL:6589
description: Mixed, incl. Transposase DDE domain, and GtrA-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6589_Mixed,_incl._Transposase_DDE_domain,_and_GtrA-like_protein


id: CL:6590
description: Mixed, incl. Transposase DDE domain, and GtrA-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6590_Mixed,_incl._Transposase_DDE_domain,_and_GtrA-like_protein


id: CL:6609
description: Mixed, incl. Transposase DDE domain, and Pfam phage integrase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6609_Mixed,_incl._Transposase_DDE_domain,_and_Pfam_phage_integrase_family


id: CL:6620
description: Mixed, incl. DNA modification, and Extracellular region
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6620_Mixed,_incl._DNA_modification,_and_Extracellular_region


id: CL:6622
description: Mixed, incl. DNA modification, and Extracellular region
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6622_Mixed,_incl._DNA_modification,_and_Extracellular_region


id: CL:6624
description: Mixed, incl. DNA modification, and Extracellular region
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6624_Mixed,_incl._DNA_modification,_and_Extracellular_region


id: CL:6625
description: Mixed, incl. DNA modification, and Double-strand break repair via homologous recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6625_Mixed,_incl._DNA_modification,_and_Double-strand_break_repair_via_homologous_recombination


id: CL:6626
description: DNA modification, and Double-strand break repair via homologous recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6626_DNA_modification,_and_Double-strand_break_repair_via_homologous_recombination


id: CL:6628
description: DNA modification, and Double-strand break repair via homologous recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6628_DNA_modification,_and_Double-strand_break_repair_via_homologous_recombination


id: CL:6631
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6631_Endodeoxyribonuclease_complex,_and_Type_I_restriction_enzyme_EcoKI-like,_methylase_subunit,_N-terminal_domain_superfamily

description:
  Endodeoxyribonuclease complex, and Type I restriction enzyme EcoKI-like, methylase subunit, N-terminal domain superfamily


id: CL:6633
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6633_Type_I_restriction_modification_DNA_specificity_domain,_and_N6_adenine-specific_DNA_methyltransferase,_N-terminal_domain

description:
  Type I restriction modification DNA specificity domain, and N6 adenine-specific DNA methyltransferase, N-terminal domain


id: CL:6647
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6647_Type_I_restriction_enzyme_EcoKI-like,_methylase_subunit,_N-terminal_domain_superfamily,_and_EcoEI_R_protein_C-terminal

description:
  Type I restriction enzyme EcoKI-like, methylase subunit, N-terminal domain superfamily, and EcoEI R protein C-terminal


id: CL:6672
description: Double-strand break repair via homologous recombination, and Ribosomal large subunit binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6672_Double-strand_break_repair_via_homologous_recombination,_and_Ribosomal_large_subunit_binding


id: CL:668
description: Mostly uncharacterized, incl. Chromosome segregation, and Phosphoglycerate mutase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:668_Mostly_uncharacterized,_incl._Chromosome_segregation,_and_Phosphoglycerate_mutase_family


id: CL:6690
description: Ribonuclease toxin BrnT superfamily, and Transposition
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6690_Ribonuclease_toxin_BrnT_superfamily,_and_Transposition


id: CL:6699
description: Mixed, incl. Extracellular region, and Ribbon-helix-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6699_Mixed,_incl._Extracellular_region,_and_Ribbon-helix-helix


id: CL:671
description: Mixed, incl. Rad50/SbcC-type AAA domain, and Intracellular membrane-bounded organelle
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:671_Mixed,_incl._Rad50/SbcC-type_AAA_domain,_and_Intracellular_membrane-bounded_organelle


id: CL:6715
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6715_Mixed,_incl._AAA_domain,_putative_AbiEii_toxin,_Type_IV_TA_system,_and_Domain_of_unknown_function_DUF262

description:
  Mixed, incl. AAA domain, putative AbiEii toxin, Type IV TA system, and Domain of unknown function DUF262


id: CL:6742
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6742_Mixed,_incl._Antitoxin_Phd_YefM,_type_II_toxin-antitoxin_system,_and_Site-specific_DNA-methyltransferase_(adenine-specific)_activity

description:
  Mixed, incl. Antitoxin Phd_YefM, type II toxin-antitoxin system, and Site-specific DNA-methyltransferase (adenine-specific) activity


id: CL:6755
description: Mixed, incl. TerD domain, and Endomembrane system
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6755_Mixed,_incl._TerD_domain,_and_Endomembrane_system


id: CL:6756
description: Mixed, incl. Spermatogenesis-associated protein 20, and NYN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6756_Mixed,_incl._Spermatogenesis-associated_protein_20,_and_NYN_domain


id: CL:6769
description: Mixed, incl. TerD domain, and Endomembrane system
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6769_Mixed,_incl._TerD_domain,_and_Endomembrane_system


id: CL:6795
description: Mostly uncharacterized, incl. Winged helix-like DNA-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6795_Mostly_uncharacterized,_incl._Winged_helix-like_DNA-binding_domain_superfamily


id: CL:6854
description: Mixed, incl. TTHA1013/TTHA0281-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:6854_Mixed,_incl._TTHA1013/TTHA0281-like


id: CL:686
description: Mostly uncharacterized, incl. CAAX-box protein maturation
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:686_Mostly_uncharacterized,_incl._CAAX-box_protein_maturation


id: CL:700
description: Mixed, incl. 4Fe-4S binding domain, and Imidazoleglycerol-phosphate dehydratase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:700_Mixed,_incl._4Fe-4S_binding_domain,_and_Imidazoleglycerol-phosphate_dehydratase_activity


id: CL:715
description: Mixed, incl. Photosynthesis - antenna proteins, and Protein-bilin linkage
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:715_Mixed,_incl._Photosynthesis_-_antenna_proteins,_and_Protein-bilin_linkage


id: CL:717
description: Photosynthesis - antenna proteins, and Protein-bilin linkage
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:717_Photosynthesis_-_antenna_proteins,_and_Protein-bilin_linkage


id: CL:719
description: Phycobilisome, and Protein-bilin linkage
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:719_Phycobilisome,_and_Protein-bilin_linkage


id: CL:726
description: Allophycocyanin, beta subunit, and Phycobilisome
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:726_Allophycocyanin,_beta_subunit,_and_Phycobilisome


id: CL:738
description: Photosynthesis - antenna proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:738_Photosynthesis_-_antenna_proteins


id: CL:756
description: Photosynthesis - antenna proteins, and Cobalt ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:756_Photosynthesis_-_antenna_proteins,_and_Cobalt_ion_binding


id: CL:758
description: Phycobilisome linker protein, and CpeT/CpcT family (DUF1001)
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:758_Phycobilisome_linker_protein,_and_CpeT/CpcT_family_(DUF1001)


id: CL:786
description: Mixed, incl. HIT-like domain, and Uncharacterised protein family Ycf35
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:786_Mixed,_incl._HIT-like_domain,_and_Uncharacterised_protein_family_Ycf35


id: CL:808
description: Mixed, incl. Photosynthesis, and Carotenoid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:808_Mixed,_incl._Photosynthesis,_and_Carotenoid_biosynthesis


id: CL:810
description: Mixed, incl. Protein-containing complex organization, and Carotenoid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:810_Mixed,_incl._Protein-containing_complex_organization,_and_Carotenoid_biosynthesis


id: CL:811
description: Mixed, incl. Protein-containing complex organization, and Carotenoid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:811_Mixed,_incl._Protein-containing_complex_organization,_and_Carotenoid_biosynthesis


id: CL:812
description: Mixed, incl. Carotenoid biosynthesis, and Protein-containing complex assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:812_Mixed,_incl._Carotenoid_biosynthesis,_and_Protein-containing_complex_assembly


id: CL:814
description: Mixed, incl. Protein-containing complex assembly, and Cytochrome c6
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:814_Mixed,_incl._Protein-containing_complex_assembly,_and_Cytochrome_c6


id: CL:817
description: Mostly uncharacterized, incl. Photosystem II assembly, and Cytochrome c6
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:817_Mostly_uncharacterized,_incl._Photosystem_II_assembly,_and_Cytochrome_c6


id: CL:818
description: Mixed, incl. Photosystem II assembly, and Photosystem II oxygen evolving complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:818_Mixed,_incl._Photosystem_II_assembly,_and_Photosystem_II_oxygen_evolving_complex


id: CL:820
description: Mixed, incl. Photosystem II assembly, and PAP_fibrillin
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:820_Mixed,_incl._Photosystem_II_assembly,_and_PAP_fibrillin


id: CL:821
description: Mixed, incl. Photosystem II assembly, and PAP_fibrillin
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:821_Mixed,_incl._Photosystem_II_assembly,_and_PAP_fibrillin


id: CL:823
description: Mixed, incl. Photosystem II assembly, and Terpene metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:823_Mixed,_incl._Photosystem_II_assembly,_and_Terpene_metabolic_process


id: CL:845
description: Mixed, incl. tRNA 5-end processing, and GAF-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:845_Mixed,_incl._tRNA_5-end_processing,_and_GAF-like_domain_superfamily


id: CL:859
description: Mixed, incl. Protein of unknown function DUF3593, and GUN4-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:859_Mixed,_incl._Protein_of_unknown_function_DUF3593,_and_GUN4-like


id: CL:869
description: Cytochrome c6, and Protein of unknown function DUF3593
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:869_Cytochrome_c6,_and_Protein_of_unknown_function_DUF3593


id: CL:904
description: Mixed, incl. Quinone binding, and Protein-containing complex organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:904_Mixed,_incl._Quinone_binding,_and_Protein-containing_complex_organization


id: CL:906
description: Mixed, incl. Protein-containing complex assembly, and TPM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:906_Mixed,_incl._Protein-containing_complex_assembly,_and_TPM_domain


id: CL:922
description: Mixed, incl. TPM domain, and Ribonucleoside-diphosphate reductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:922_Mixed,_incl._TPM_domain,_and_Ribonucleoside-diphosphate_reductase_activity


id: CL:936
description: Mixed, incl. Plastoquinone, and Thiamine-phosphate diphosphorylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:936_Mixed,_incl._Plastoquinone,_and_Thiamine-phosphate_diphosphorylase_activity


id: CL:938
description: Plastoquinone, and Organelle envelope
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:938_Plastoquinone,_and_Organelle_envelope


id: CL:965
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:965_2Fe-2S_iron-sulfur_cluster_binding_domain,_and_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors

description:
  2Fe-2S iron-sulfur cluster binding domain, and Oxidoreductase activity, acting on iron-sulfur proteins as donors


id: CL:980
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:980_Photosystem,_and_Electron_transporter,_transferring_electrons_within_cytochrome_b6/f_complex_of_photosystem_II_activity

description:
  Photosystem, and Electron transporter, transferring electrons within cytochrome b6/f complex of photosystem II activity


id: CL:990
description: Photosynthetic electron transport chain
name:
  Local Network Cluster (STRING).STRING_v12.0_1615909_STRINGid_CL:990_Photosynthetic_electron_transport_chain


id: GO:0000122
description: Negative regulation of transcription by RNA polymerase II
memo: https://amigo.geneontology.org/amigo/term/GO:0000122
golevel: 10
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0000122_Negative_regulation_of_transcription_by_RNA_polymerase_II


id: GO:0000394
description: RNA splicing, via endonucleolytic cleavage and ligation
memo: https://amigo.geneontology.org/amigo/term/GO:0000394
golevel: 6
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0000394_RNA_splicing,_via_endonucleolytic_cleavage_and_ligation


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 7
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000724
description: Double-strand break repair via homologous recombination
memo: https://amigo.geneontology.org/amigo/term/GO:0000724
golevel: 7
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0000724_Double-strand_break_repair_via_homologous_recombination


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003864
description: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003864
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0003864_3-methyl-2-oxobutanoate_hydroxymethyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 6
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 3
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0003992
description: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003992
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0003992_N2-acetyl-L-ornithine:2-oxoglutarate_5-aminotransferase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004316
description: 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004316
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0004316_3-oxoacyl-[acyl-carrier-protein]_reductase_(NADPH)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004318
description: Enoyl-[acyl-carrier-protein] reductase (NADH) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004318
golevel: 6
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0004318_Enoyl-[acyl-carrier-protein]_reductase_(NADH)_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004471
description: Malate dehydrogenase (decarboxylating) (NAD+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004471
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0004471_Malate_dehydrogenase_(decarboxylating)_(NAD+)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004489
description: Methylenetetrahydrofolate reductase (NAD(P)H) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004489
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0004489_Methylenetetrahydrofolate_reductase_(NAD(P)H)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004604
description: Phosphoadenylyl-sulfate reductase (thioredoxin) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004604
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0004604_Phosphoadenylyl-sulfate_reductase_(thioredoxin)_activity


id: GO:0004616
description: Phosphogluconate dehydrogenase (decarboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004616
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0004616_Phosphogluconate_dehydrogenase_(decarboxylating)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004719
description: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004719
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0004719_protein-L-isoaspartate_(D-aspartate)_O-methyltransferase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0005315
description: Inorganic phosphate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005315
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0005315_Inorganic_phosphate_transmembrane_transporter_activity


id: GO:0006367
description: Transcription initiation from RNA polymerase II promoter
memo: https://amigo.geneontology.org/amigo/term/GO:0006367
golevel: 8
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0006367_Transcription_initiation_from_RNA_polymerase_II_promoter


id: GO:0006388
description: tRNA splicing, via endonucleolytic cleavage and ligation
memo: https://amigo.geneontology.org/amigo/term/GO:0006388
golevel: 6
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0006388_tRNA_splicing,_via_endonucleolytic_cleavage_and_ligation


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 6
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0007157
description: Heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
memo: https://amigo.geneontology.org/amigo/term/GO:0007157
golevel: 4
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0007157_Heterophilic_cell-cell_adhesion_via_plasma_membrane_cell_adhesion_molecules


id: GO:0008028
description: Monocarboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008028
golevel: 4
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0008028_Monocarboxylic_acid_transmembrane_transporter_activity


id: GO:0008124
description: 4-alpha-hydroxytetrahydrobiopterin dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008124
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0008124_4-alpha-hydroxytetrahydrobiopterin_dehydratase_activity


id: GO:0008271
description: Secondary active sulfate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008271
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0008271_Secondary_active_sulfate_transmembrane_transporter_activity


id: GO:0008413
description: 8-oxo-7,8-dihydroguanosine triphosphate pyrophosphatase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008413
golevel: 7
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0008413_8-oxo-7,8-dihydroguanosine_triphosphate_pyrophosphatase_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 6
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008686
description: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008686
golevel: 4
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0008686_3,4-dihydroxy-2-butanone-4-phosphate_synthase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008759
description: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008759
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0008759_UDP-3-O-[3-hydroxymyristoyl]_N-acetylglucosamine_deacetylase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008780
description: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008780
golevel: 6
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0008780_acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine_O-acyltransferase_activity


id: GO:0008817
description: cob(I)yrinic acid a,c-diamide adenosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008817
golevel: 4
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0008817_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008939
description: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008939
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0008939_Nicotinate-nucleotide-dimethylbenzimidazole_phosphoribosyltransferase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 3
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009013
description: Succinate-semialdehyde dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009013
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0009013_Succinate-semialdehyde_dehydrogenase_[NAD(P)+]_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 7
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 7
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009139
description: Pyrimidine nucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009139
golevel: 7
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0009139_Pyrimidine_nucleoside_diphosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 7
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009157
description: Deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009157
golevel: 7
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0009157_Deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 8
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 8
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 8
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009175
description: Pyrimidine ribonucleoside monophosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009175
golevel: 8
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0009175_Pyrimidine_ribonucleoside_monophosphate_catabolic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 8
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 8
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 8
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 8
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 8
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 8
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 8
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009210
description: Pyrimidine ribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009210
golevel: 8
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0009210_Pyrimidine_ribonucleoside_triphosphate_catabolic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 8
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 8
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 8
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 8
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 8
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009330
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009330
golevel: 3
name:
  GOCC.STRING_v12.0_1615909_STRINGid_GO:0009330_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_complex


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010309
description: Acireductone dioxygenase [iron(II)-requiring] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0010309
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0010309_Acireductone_dioxygenase_[iron(II)-requiring]_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 7
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 7
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0010604
description: Positive regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010604
golevel: 6
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0010604_Positive_regulation_of_macromolecule_metabolic_process


id: GO:0010605
description: Negative regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010605
golevel: 6
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0010605_Negative_regulation_of_macromolecule_metabolic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015415
description: ATPase-coupled phosphate ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015415
golevel: 3
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0015415_ATPase-coupled_phosphate_ion_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015658
description: Branched-chain amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015658
golevel: 4
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0015658_Branched-chain_amino_acid_transmembrane_transporter_activity


id: GO:0015988
description: Energy coupled proton transmembrane transport, against electrochemical gradient
memo: https://amigo.geneontology.org/amigo/term/GO:0015988
golevel: 6
name:
  GOBP.STRING_v12.0_1615909_STRINGid_GO:0015988_Energy_coupled_proton_transmembrane_transport,_against_electrochemical_gradient


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016624
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016624
golevel: 4
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0016624_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_disulfide_as_acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016636
description: Oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016636
golevel: 4
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0016636_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_iron-sulfur_protein_as_acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016641
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016641
golevel: 4
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0016641_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_oxygen_as_acceptor


id: GO:0016642
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016642
golevel: 4
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0016642_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_disulfide_as_acceptor


id: GO:0016643
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016643
golevel: 4
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0016643_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_iron-sulfur_protein_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016652
description: Oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016652
golevel: 4
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0016652_Oxidoreductase_activity,_acting_on_NAD(P)H,_NAD(P)_as_acceptor


id: GO:0016653
description: Oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016653
golevel: 4
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0016653_Oxidoreductase_activity,_acting_on_NAD(P)H,_heme_protein_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016657
description: Oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016657
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0016657_Oxidoreductase_activity,_acting_on_NAD(P)H,_nitrogenous_group_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016664
memo: https://amigo.geneontology.org/amigo/term/GO:0016664
golevel: 4
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0016664_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors,_iron-sulfur_protein_as_acceptor

description:
  Oxidoreductase activity, acting on other nitrogenous compounds as donors, iron-sulfur protein as acceptor


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016672
memo: https://amigo.geneontology.org/amigo/term/GO:0016672
golevel: 4
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0016672_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor


id: GO:0016673
description: Oxidoreductase activity, acting on a sulfur group of donors, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016673
golevel: 4
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0016673_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_iron-sulfur_protein_as_acceptor


id: GO:0016675
description: Oxidoreductase activity, acting on a heme group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016675
golevel: 3
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0016675_Oxidoreductase_activity,_acting_on_a_heme_group_of_donors


id: GO:0016679
description: Oxidoreductase activity, acting on diphenols and related substances as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016679
golevel: 3
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0016679_Oxidoreductase_activity,_acting_on_diphenols_and_related_substances_as_donors


id: GO:0016682
description: Oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016682
golevel: 4
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0016682_Oxidoreductase_activity,_acting_on_diphenols_and_related_substances_as_donors,_oxygen_as_acceptor


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_1615909_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


