# pathwayInfo

id: PF01406
description: tRNA synthetases class I (C) catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01406
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF01406_tRNA_synthetases_class_I_(C)_catalytic_domain


id: PF01408
description: Oxidoreductase family, NAD-binding Rossmann fold
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01408
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF01408_Oxidoreductase_family,_NAD-binding_Rossmann_fold


id: PF01409
description: tRNA synthetases class II core domain (F)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01409
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF01409_tRNA_synthetases_class_II_core_domain_(F)


id: PF01420
description: Type I restriction modification DNA specificity domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01420
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF01420_Type_I_restriction_modification_DNA_specificity_domain


id: PF01447
description: Thermolysin metallopeptidase, catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01447
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF01447_Thermolysin_metallopeptidase,_catalytic_domain


id: PF01503
description: Phosphoribosyl-ATP pyrophosphohydrolase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01503
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF01503_Phosphoribosyl-ATP_pyrophosphohydrolase


id: PF01509
description: TruB family pseudouridylate synthase (N terminal domain)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01509
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF01509_TruB_family_pseudouridylate_synthase_(N_terminal_domain)


id: PF01512
description: Respiratory-chain NADH dehydrogenase 51 Kd subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01512
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF01512_Respiratory-chain_NADH_dehydrogenase_51_Kd_subunit


id: PF01547
description: Bacterial extracellular solute-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01547
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF01547_Bacterial_extracellular_solute-binding_protein


id: PF01557
description: Fumarylacetoacetate (FAA) hydrolase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01557
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF01557_Fumarylacetoacetate_(FAA)_hydrolase_family


id: PF01558
description: Pyruvate ferredoxin/flavodoxin oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01558
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF01558_Pyruvate_ferredoxin/flavodoxin_oxidoreductase


id: PF01566
description: Natural resistance-associated macrophage protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01566
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF01566_Natural_resistance-associated_macrophage_protein


id: PF01571
description: Aminomethyltransferase folate-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01571
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF01571_Aminomethyltransferase_folate-binding_domain


id: PF01648
description: 4-phosphopantetheinyl transferase superfamily
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01648
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF01648_4-phosphopantetheinyl_transferase_superfamily


id: PF01656
description: CobQ/CobB/MinD/ParA nucleotide binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01656
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF01656_CobQ/CobB/MinD/ParA_nucleotide_binding_domain


id: PF01663
description: Type I phosphodiesterase / nucleotide pyrophosphatase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01663
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF01663_Type_I_phosphodiesterase_/_nucleotide_pyrophosphatase


id: PF01741
description: Large-conductance mechanosensitive channel, MscL
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01741
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF01741_Large-conductance_mechanosensitive_channel,_MscL


id: PF01773
description: Na+ dependent nucleoside transporter N-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01773
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF01773_Na+_dependent_nucleoside_transporter_N-terminus


id: PF01790
description: Prolipoprotein diacylglyceryl transferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01790
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF01790_Prolipoprotein_diacylglyceryl_transferase


id: PF01832
description: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01832
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF01832_Mannosyl-glycoprotein_endo-beta-N-acetylglucosaminidase


id: PF01855
description: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01855
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF01855_Pyruvate_flavodoxin/ferredoxin_oxidoreductase,_thiamine_diP-bdg


id: PF02074
description: Carboxypeptidase Taq (M32) metallopeptidase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02074
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02074_Carboxypeptidase_Taq_(M32)_metallopeptidase


id: PF02075
description: Crossover junction endodeoxyribonuclease RuvC
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02075
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02075_Crossover_junction_endodeoxyribonuclease_RuvC


id: PF02082
description: Iron-dependent Transcriptional regulator
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02082
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02082_Iron-dependent_Transcriptional_regulator


id: PF02086
description: D12 class N6 adenine-specific DNA methyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02086
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02086_D12_class_N6_adenine-specific_DNA_methyltransferase


id: PF02129
description: X-Pro dipeptidyl-peptidase (S15 family)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02129
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02129_X-Pro_dipeptidyl-peptidase_(S15_family)


id: PF02367
description: Threonylcarbamoyl adenosine biosynthesis protein TsaE
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02367
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02367_Threonylcarbamoyl_adenosine_biosynthesis_protein_TsaE


id: PF02403
description: Seryl-tRNA synthetase N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02403
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02403_Seryl-tRNA_synthetase_N-terminal_domain


id: PF02410
description: Ribosomal silencing factor during starvation
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02410
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02410_Ribosomal_silencing_factor_during_starvation_


id: PF02433
description: Cytochrome C oxidase, mono-heme subunit/FixO
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02433
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02433_Cytochrome_C_oxidase,_mono-heme_subunit/FixO


id: PF02482
description: Sigma 54 modulation protein / S30EA ribosomal protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02482
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02482_Sigma_54_modulation_protein_/_S30EA_ribosomal_protein


id: PF02492
description: CobW/HypB/UreG, nucleotide-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02492
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02492_CobW/HypB/UreG,_nucleotide-binding_domain


id: PF02537
description: CrcB-like protein, Camphor Resistance (CrcB)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02537
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02537_CrcB-like_protein,_Camphor_Resistance_(CrcB)


id: PF02563
description: Polysaccharide biosynthesis/export protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02563
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02563_Polysaccharide_biosynthesis/export_protein


id: PF02586
description: SOS response associated peptidase (SRAP)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02586
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02586_SOS_response_associated_peptidase_(SRAP)


id: PF02588
description: Uncharacterised 5xTM membrane BCR, YitT family COG1284
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02588
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02588_Uncharacterised_5xTM_membrane_BCR,_YitT_family_COG1284


id: PF02616
description: Segregation and condensation protein ScpA
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02616
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02616_Segregation_and_condensation_protein_ScpA


id: PF02617
description: ATP-dependent Clp protease adaptor protein ClpS
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02617
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02617_ATP-dependent_Clp_protease_adaptor_protein_ClpS


id: PF02627
description: Carboxymuconolactone decarboxylase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02627
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02627_Carboxymuconolactone_decarboxylase_family


id: PF02653
description: Branched-chain amino acid transport system / permease component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02653
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02653_Branched-chain_amino_acid_transport_system_/_permease_component


id: PF02662
description: Methyl-viologen-reducing hydrogenase, delta subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02662
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02662_Methyl-viologen-reducing_hydrogenase,_delta_subunit


id: PF02670
description: 1-deoxy-D-xylulose 5-phosphate reductoisomerase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02670
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02670_1-deoxy-D-xylulose_5-phosphate_reductoisomerase


id: PF02679
description: (2R)-phospho-3-sulfolactate synthase (ComA)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02679
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02679_(2R)-phospho-3-sulfolactate_synthase_(ComA)


id: PF02683
description: Cytochrome C biogenesis protein transmembrane region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02683
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02683_Cytochrome_C_biogenesis_protein_transmembrane_region


id: PF02700
description: Phosphoribosylformylglycinamidine (FGAM) synthase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02700
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02700_Phosphoribosylformylglycinamidine_(FGAM)_synthase


id: PF02729
description: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02729
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02729_Aspartate/ornithine_carbamoyltransferase,_carbamoyl-P_binding_domain


id: PF02737
description: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02737
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02737_3-hydroxyacyl-CoA_dehydrogenase,_NAD_binding_domain


id: PF02746
description: Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02746
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02746_Mandelate_racemase_/_muconate_lactonizing_enzyme,_N-terminal_domain


id: PF02769
description: AIR synthase related protein, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02769
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02769_AIR_synthase_related_protein,_C-terminal_domain


id: PF02771
description: Acyl-CoA dehydrogenase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02771
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02771_Acyl-CoA_dehydrogenase,_N-terminal_domain


id: PF02772
description: S-adenosylmethionine synthetase, central domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02772
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02772_S-adenosylmethionine_synthetase,_central_domain


id: PF02773
description: S-adenosylmethionine synthetase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02773
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02773_S-adenosylmethionine_synthetase,_C-terminal_domain


id: PF02774
description: Semialdehyde dehydrogenase, dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02774
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02774_Semialdehyde_dehydrogenase,_dimerisation_domain


id: PF02775
description: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02775
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02775_Thiamine_pyrophosphate_enzyme,_C-terminal_TPP_binding_domain


id: PF02776
description: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02776
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02776_Thiamine_pyrophosphate_enzyme,_N-terminal_TPP_binding_domain


id: PF02777
description: Iron/manganese superoxide dismutases, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02777
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02777_Iron/manganese_superoxide_dismutases,_C-terminal_domain


id: PF02784
description: Pyridoxal-dependent decarboxylase, pyridoxal binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02784
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02784_Pyridoxal-dependent_decarboxylase,_pyridoxal_binding_domain


id: PF02786
description: Carbamoyl-phosphate synthase L chain, ATP binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02786
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02786_Carbamoyl-phosphate_synthase_L_chain,_ATP_binding_domain


id: PF02790
description: Cytochrome C oxidase subunit II, transmembrane domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02790
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02790_Cytochrome_C_oxidase_subunit_II,_transmembrane_domain


id: PF02800
description: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02800
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02800_Glyceraldehyde_3-phosphate_dehydrogenase,_C-terminal_domain


id: PF02801
description: Beta-ketoacyl synthase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02801
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02801_Beta-ketoacyl_synthase,_C-terminal_domain


id: PF02812
description: Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02812
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02812_Glu/Leu/Phe/Val_dehydrogenase,_dimerisation_domain


id: PF02823
description: ATP synthase, Delta/Epsilon chain, beta-sandwich domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02823
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02823_ATP_synthase,_Delta/Epsilon_chain,_beta-sandwich_domain


id: PF02826
description: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02826
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02826_D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD_binding_domain


id: PF02844
description: Phosphoribosylglycinamide synthetase, N domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02844
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02844_Phosphoribosylglycinamide_synthetase,_N_domain


id: PF02852
description: Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02852
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02852_Pyridine_nucleotide-disulphide_oxidoreductase,_dimerisation_domain


id: PF02861
description: Clp amino terminal domain, pathogenicity island component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02861
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02861_Clp_amino_terminal_domain,_pathogenicity_island_component


id: PF02866
description: Lactate/malate dehydrogenase, alpha/beta C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02866
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02866_Lactate/malate_dehydrogenase,_alpha/beta_C-terminal_domain


id: PF02867
description: Ribonucleotide reductase, barrel domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02867
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02867_Ribonucleotide_reductase,_barrel_domain


id: PF02870
description: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02870
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02870_6-O-methylguanine_DNA_methyltransferase,_ribonuclease-like_domain


id: PF02873
description: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02873
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02873_UDP-N-acetylenolpyruvoylglucosamine_reductase,_C-terminal_domain


id: PF02874
description: ATP synthase alpha/beta family, beta-barrel domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02874
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02874_ATP_synthase_alpha/beta_family,_beta-barrel_domain


id: PF02875
description: Mur ligase family, glutamate ligase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02875
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02875_Mur_ligase_family,_glutamate_ligase_domain


id: PF02878
description: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02878
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02878_Phosphoglucomutase/phosphomannomutase,_alpha/beta/alpha_domain_I


id: PF02879
description: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02879
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02879_Phosphoglucomutase/phosphomannomutase,_alpha/beta/alpha_domain_II


id: PF02880
description: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02880
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02880_Phosphoglucomutase/phosphomannomutase,_alpha/beta/alpha_domain_III


id: PF02882
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02882
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02882_Tetrahydrofolate_dehydrogenase/cyclohydrolase,_NAD(P)-binding_domain


id: PF02894
description: Oxidoreductase family, C-terminal alpha/beta domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02894
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02894_Oxidoreductase_family,_C-terminal_alpha/beta_domain


id: PF02897
description: Prolyl oligopeptidase, N-terminal beta-propeller domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02897
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02897_Prolyl_oligopeptidase,_N-terminal_beta-propeller_domain


id: PF02900
description: Catalytic LigB subunit of aromatic ring-opening dioxygenase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02900
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02900_Catalytic_LigB_subunit_of_aromatic_ring-opening_dioxygenase


id: PF02912
description: Aminoacyl tRNA synthetase class II, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02912
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02912_Aminoacyl_tRNA_synthetase_class_II,_N-terminal_domain


id: PF02954
description: Bacterial regulatory protein, Fis family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02954
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02954_Bacterial_regulatory_protein,_Fis_family


id: PF02965
description: Vitamin B12 dependent methionine synthase, activation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02965
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF02965_Vitamin_B12_dependent_methionine_synthase,_activation_domain


id: PF03009
description: Glycerophosphoryl diester phosphodiesterase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03009
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03009_Glycerophosphoryl_diester_phosphodiesterase_family


id: PF03033
description: Glycosyltransferase family 28 N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03033
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03033_Glycosyltransferase_family_28_N-terminal_domain


id: PF03062
description: MBOAT, membrane-bound O-acyltransferase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03062
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03062_MBOAT,_membrane-bound_O-acyltransferase_family


id: PF03099
description: Biotin/lipoate A/B protein ligase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03099
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03099_Biotin/lipoate_A/B_protein_ligase_family


id: PF03118
description: Bacterial RNA polymerase, alpha chain C terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03118
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03118_Bacterial_RNA_polymerase,_alpha_chain_C_terminal_domain


id: PF03279
description: Bacterial lipid A biosynthesis acyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03279
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03279_Bacterial_lipid_A_biosynthesis_acyltransferase


id: PF03328
description: HpcH/HpaI aldolase/citrate lyase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03328
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03328_HpcH/HpaI_aldolase/citrate_lyase_family


id: PF03331
description: UDP-3-O-acyl N-acetylglycosamine deacetylase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03331
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03331_UDP-3-O-acyl_N-acetylglycosamine_deacetylase


id: PF03349
description: Outer membrane protein transport protein (OMPP1/FadL/TodX)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03349
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03349_Outer_membrane_protein_transport_protein_(OMPP1/FadL/TodX)


id: PF03372
description: Endonuclease/Exonuclease/phosphatase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03372
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03372_Endonuclease/Exonuclease/phosphatase_family


id: PF03417
description: Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03417
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03417_Acyl-coenzyme_A:6-aminopenicillanic_acid_acyl-transferase


id: PF03435
description: Saccharopine dehydrogenase NADP binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03435
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03435_Saccharopine_dehydrogenase_NADP_binding_domain


id: PF03446
description: NAD binding domain of 6-phosphogluconate dehydrogenase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03446
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03446_NAD_binding_domain_of_6-phosphogluconate_dehydrogenase


id: PF03449
description: Transcription elongation factor, N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03449
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03449_Transcription_elongation_factor,_N-terminal


id: PF03544
description: Gram-negative bacterial TonB protein C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03544
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03544_Gram-negative_bacterial_TonB_protein_C-terminal


id: PF03548
description: Outer membrane lipoprotein carrier protein LolA
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03548
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03548_Outer_membrane_lipoprotein_carrier_protein_LolA


id: PF03551
description: Transcriptional regulator PadR-like family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03551
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03551_Transcriptional_regulator_PadR-like_family


id: PF03597
description: Cytochrome oxidase maturation protein cbb3-type
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03597
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03597_Cytochrome_oxidase_maturation_protein_cbb3-type


id: PF03626
description: Prokaryotic Cytochrome C oxidase subunit IV
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03626
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03626_Prokaryotic_Cytochrome_C_oxidase_subunit_IV_


id: PF03687
description: Uncharacterised protein family (UPF0164)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03687
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03687_Uncharacterised_protein_family_(UPF0164)


id: PF03692
description: Putative zinc- or iron-chelating domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03692
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03692_Putative_zinc-_or_iron-chelating_domain


id: PF03706
description: Lysylphosphatidylglycerol synthase TM region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03706
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03706_Lysylphosphatidylglycerol_synthase_TM_region


id: PF03717
description: Penicillin-binding Protein dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03717
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03717_Penicillin-binding_Protein_dimerisation_domain


id: PF03719
description: Ribosomal protein S5, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03719
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03719_Ribosomal_protein_S5,_C-terminal_domain


id: PF03721
description: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03721
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03721_UDP-glucose/GDP-mannose_dehydrogenase_family,_NAD_binding_domain


id: PF03726
description: Polyribonucleotide nucleotidyltransferase, RNA binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03726
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03726_Polyribonucleotide_nucleotidyltransferase,_RNA_binding_domain


id: PF03729
description: Short repeat of unknown function (DUF308)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03729
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03729_Short_repeat_of_unknown_function_(DUF308)


id: PF03740
description: Pyridoxal phosphate biosynthesis protein PdxJ
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03740
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03740_Pyridoxal_phosphate_biosynthesis_protein_PdxJ


id: PF03767
description: HAD superfamily, subfamily IIIB (Acid phosphatase)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03767
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03767_HAD_superfamily,_subfamily_IIIB_(Acid_phosphatase)


id: PF03785
description: Peptidase family C25, C terminal ig-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03785
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03785_Peptidase_family_C25,_C_terminal_ig-like_domain


id: PF03807
description: NADP oxidoreductase coenzyme F420-dependent
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03807
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03807_NADP_oxidoreductase_coenzyme_F420-dependent


id: PF03819
description: MazG nucleotide pyrophosphohydrolase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03819
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03819_MazG_nucleotide_pyrophosphohydrolase_domain


id: PF03948
description: Ribosomal protein L9, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03948
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03948_Ribosomal_protein_L9,_C-terminal_domain


id: PF03950
description: tRNA synthetases class I (E and Q), anti-codon binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03950
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03950_tRNA_synthetases_class_I_(E_and_Q),_anti-codon_binding_domain


id: PF03989
description: DNA gyrase C-terminal domain, beta-propeller
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03989
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF03989_DNA_gyrase_C-terminal_domain,_beta-propeller


id: PF04020
description: Mycobacterial 4 TMS phage holin, superfamily IV
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04020
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF04020_Mycobacterial_4_TMS_phage_holin,_superfamily_IV


id: PF04079
description: Segregation and condensation complex subunit ScpB
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04079
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF04079_Segregation_and_condensation_complex_subunit_ScpB


id: PF04101
description: Glycosyltransferase family 28 C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04101
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF04101_Glycosyltransferase_family_28_C-terminal_domain


id: PF04107
description: Glutamate-cysteine ligase family 2(GCS2)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04107
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF04107_Glutamate-cysteine_ligase_family_2(GCS2)


id: PF04127
description: DNA / pantothenate metabolism flavoprotein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04127
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF04127_DNA_/_pantothenate_metabolism_flavoprotein


id: PF04140
description: Isoprenylcysteine carboxyl methyltransferase (ICMT) family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04140
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF04140_Isoprenylcysteine_carboxyl_methyltransferase_(ICMT)_family_


id: PF04151
description: Bacterial pre-peptidase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04151
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF04151_Bacterial_pre-peptidase_C-terminal_domain


id: PF04166
description: Pyridoxal phosphate biosynthetic protein PdxA
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04166
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF04166_Pyridoxal_phosphate_biosynthetic_protein_PdxA


id: PF04247
description: Invasion gene expression up-regulator, SirB
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04247
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF04247_Invasion_gene_expression_up-regulator,_SirB


id: PF04313
description: Type I restriction enzyme R protein N terminus (HSDR_N)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04313
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF04313_Type_I_restriction_enzyme_R_protein_N_terminus_(HSDR_N)


id: PF04339
description: Peptidogalycan biosysnthesis/recognition
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04339
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF04339_Peptidogalycan_biosysnthesis/recognition


id: PF04357
description: TamB, inner membrane protein subunit of TAM complex
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04357
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF04357_TamB,_inner_membrane_protein_subunit_of_TAM_complex


id: PF04371
description: Porphyromonas-type peptidyl-arginine deiminase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04371
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF04371_Porphyromonas-type_peptidyl-arginine_deiminase


id: PF04392
description: ABC transporter substrate binding protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04392
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF04392_ABC_transporter_substrate_binding_protein


id: PF04413
description: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04413
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF04413_3-Deoxy-D-manno-octulosonic-acid_transferase_(kdotransferase)


id: PF04613
description: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04613
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF04613_UDP-3-O-[3-hydroxymyristoyl]_glucosamine_N-acyltransferase,_LpxD__


id: PF04715
description: Anthranilate synthase component I, N terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04715
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF04715_Anthranilate_synthase_component_I,_N_terminal_region


id: PF04760
description: Translation initiation factor IF-2, N-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04760
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF04760_Translation_initiation_factor_IF-2,_N-terminal_region


id: PF04973
description: Nicotinamide mononucleotide transporter
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04973
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF04973_Nicotinamide_mononucleotide_transporter


id: PF05173
description: Dihydrodipicolinate reductase, C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05173
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF05173_Dihydrodipicolinate_reductase,_C-terminus


id: PF05198
description: Translation initiation factor IF-3, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05198
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF05198_Translation_initiation_factor_IF-3,_N-terminal_domain


id: PF05362
description: Lon protease (S16) C-terminal proteolytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05362
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF05362_Lon_protease_(S16)_C-terminal_proteolytic_domain


id: PF05545
description: Cbb3-type cytochrome oxidase component FixQ
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05545
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF05545_Cbb3-type_cytochrome_oxidase_component_FixQ


id: PF05960
description: Bacterial protein of unknown function (DUF885)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05960
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF05960_Bacterial_protein_of_unknown_function_(DUF885)


id: PF06037
description: Bacterial protein of unknown function (DUF922)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06037
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF06037_Bacterial_protein_of_unknown_function_(DUF922)


id: PF06094
description: Gamma-glutamyl cyclotransferase, AIG2-like
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06094
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF06094_Gamma-glutamyl_cyclotransferase,_AIG2-like


id: PF06240
description: Carbon monoxide dehydrogenase subunit G (CoxG)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06240
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF06240_Carbon_monoxide_dehydrogenase_subunit_G_(CoxG)


id: PF06415
description: BPG-independent PGAM N-terminus (iPGM_N)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06415
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF06415_BPG-independent_PGAM_N-terminus_(iPGM_N)


id: PF06452
description: Carbohydrate family 9 binding domain-like
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06452
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF06452_Carbohydrate_family_9_binding_domain-like


id: PF06609
description: Fungal trichothecene efflux pump (TRI12)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06609
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF06609_Fungal_trichothecene_efflux_pump_(TRI12)


id: PF06832
description: Penicillin-Binding Protein C-terminus Family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06832
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF06832_Penicillin-Binding_Protein_C-terminus_Family


id: PF06835
description: Lipopolysaccharide-assembly, LptC-related
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06835
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF06835_Lipopolysaccharide-assembly,_LptC-related


id: PF07332
description: Putative Actinobacterial Holin-X, holin superfamily III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07332
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF07332_Putative_Actinobacterial_Holin-X,_holin_superfamily_III


id: PF07479
description: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07479
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF07479_NAD-dependent_glycerol-3-phosphate_dehydrogenase_C-terminus


id: PF07521
description: Zn-dependent metallo-hydrolase RNA specificity domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07521
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF07521_Zn-dependent_metallo-hydrolase_RNA_specificity_domain


id: PF07662
description: Na+ dependent nucleoside transporter C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07662
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF07662_Na+_dependent_nucleoside_transporter_C-terminus


id: PF07664
description: Ferrous iron transport protein B C terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07664
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF07664_Ferrous_iron_transport_protein_B_C_terminus


id: PF07669
description: Eco57I restriction-modification methylase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07669
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF07669_Eco57I_restriction-modification_methylase


id: PF07698
description: 7TM receptor with intracellular HD hydrolase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07698
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF07698_7TM_receptor_with_intracellular_HD_hydrolase


id: PF07733
description: Bacterial DNA polymerase III alpha NTPase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07733
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF07733_Bacterial_DNA_polymerase_III_alpha_NTPase_domain


id: PF08028
description: Acyl-CoA dehydrogenase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08028
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF08028_Acyl-CoA_dehydrogenase,_C-terminal_domain


id: PF08207
description: Elongation factor P (EF-P) KOW-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08207
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF08207_Elongation_factor_P_(EF-P)_KOW-like_domain


id: PF08264
description: Anticodon-binding domain of tRNA ligase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08264
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF08264_Anticodon-binding_domain_of_tRNA_ligase


id: PF08275
description: DNA primase catalytic core, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08275
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF08275_DNA_primase_catalytic_core,_N-terminal_domain


id: PF08327
description: Activator of Hsp90 ATPase homolog 1-like protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08327
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF08327_Activator_of_Hsp90_ATPase_homolog_1-like_protein


id: PF08352
description: Oligopeptide/dipeptide transporter, C-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08352
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF08352_Oligopeptide/dipeptide_transporter,_C-terminal_region


id: PF08436
description: 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08436
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF08436_1-deoxy-D-xylulose_5-phosphate_reductoisomerase_C-terminal_domain


id: PF08471
description: Class II vitamin B12-dependent ribonucleotide reductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08471
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF08471_Class_II_vitamin_B12-dependent_ribonucleotide_reductase


id: PF08501
description: Shikimate dehydrogenase substrate binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08501
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF08501_Shikimate_dehydrogenase_substrate_binding_domain


id: PF08541
description: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08541
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF08541_3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III_C_terminal__


id: PF08545
description: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08545
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF08545_3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III


id: PF08669
description: Glycine cleavage T-protein C-terminal barrel domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08669
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF08669_Glycine_cleavage_T-protein_C-terminal_barrel_domain


id: PF09365
description: Conserved hypothetical protein (DUF2461)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09365
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF09365_Conserved_hypothetical_protein_(DUF2461)


id: PF09413
description: Putative prokaryotic signal transducing protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09413
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF09413_Putative_prokaryotic_signal_transducing_protein_


id: PF09822
description: ABC-type uncharacterized transport system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09822
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF09822_ABC-type_uncharacterized_transport_system


id: PF09835
description: Uncharacterized protein conserved in bacteria (DUF2062)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09835
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF09835_Uncharacterized_protein_conserved_in_bacteria_(DUF2062)


id: PF09844
description: Uncharacterized conserved protein (COG2071)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09844
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF09844_Uncharacterized_conserved_protein_(COG2071)


id: PF09848
description: Schlafen group 3, DNA/RNA helicase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09848
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF09848_Schlafen_group_3,_DNA/RNA_helicase_domain


id: PF10006
description: Uncharacterized conserved protein (DUF2249)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10006
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF10006_Uncharacterized_conserved_protein_(DUF2249)


id: PF10027
description: Predicted integral membrane protein (DUF2269)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10027
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF10027_Predicted_integral_membrane_protein_(DUF2269)


id: PF10035
description: Uncharacterized protein conserved in bacteria (DUF2179)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10035
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF10035_Uncharacterized_protein_conserved_in_bacteria_(DUF2179)


id: PF10043
description: Predicted periplasmic lipoprotein (DUF2279)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10043
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF10043_Predicted_periplasmic_lipoprotein_(DUF2279)


id: PF10385
description: RNA polymerase beta subunit external 1 domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10385
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF10385_RNA_polymerase_beta_subunit_external_1_domain


id: PF10410
description: DnaB-helicase binding domain of primase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10410
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF10410_DnaB-helicase_binding_domain_of_primase


id: PF10417
description: C-terminal domain of 1-Cys peroxiredoxin
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10417
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF10417_C-terminal_domain_of_1-Cys_peroxiredoxin


id: PF10432
description: Bacterial phospho-glucose isomerase C-terminal SIS domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10432
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF10432_Bacterial_phospho-glucose_isomerase_C-terminal_SIS_domain


id: PF10437
description: Bacterial lipoate protein ligase C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10437
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF10437_Bacterial_lipoate_protein_ligase_C-terminus


id: PF10518
description: TAT (twin-arginine translocation) pathway signal sequence
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10518
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF10518_TAT_(twin-arginine_translocation)_pathway_signal_sequence


id: PF10555
description: Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10555
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF10555_Phospho-N-acetylmuramoyl-pentapeptide-transferase_signature_1_


id: PF10590
description: Pyridoxine 5-phosphate oxidase C-terminal dimerisation region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10590
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF10590_Pyridoxine_5-phosphate_oxidase_C-terminal_dimerisation_region


id: PF10604
description: Polyketide cyclase / dehydrase and lipid transport
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10604
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF10604_Polyketide_cyclase_/_dehydrase_and_lipid_transport


id: PF10672
description: S-adenosylmethionine-dependent methyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10672
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF10672_S-adenosylmethionine-dependent_methyltransferase


id: PF10988
description: Putative auto-transporter adhesin, head GIN domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10988
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF10988_Putative_auto-transporter_adhesin,_head_GIN_domain


id: PF11396
description: Putative beta-lactamase-inhibitor-like, PepSY-like
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11396
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF11396_Putative_beta-lactamase-inhibitor-like,_PepSY-like


id: PF11534
description: Hexameric tyrosine-coordinated heme protein (HTHP)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11534
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF11534_Hexameric_tyrosine-coordinated_heme_protein_(HTHP)


id: PF11614
description: IG-like fold at C-terminal of FixG, putative oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11614
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF11614_IG-like_fold_at_C-terminal_of_FixG,_putative_oxidoreductase


id: PF11751
description: Type IX secretion system membrane protein PorP/SprF
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11751
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF11751_Type_IX_secretion_system_membrane_protein_PorP/SprF


id: PF11799
description: impB/mucB/samB family C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11799
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF11799_impB/mucB/samB_family_C-terminal_domain


id: PF12156
description: Putative metal-binding domain of cation transport ATPase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12156
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF12156_Putative_metal-binding_domain_of_cation_transport_ATPase


id: PF12169
description: DNA polymerase III subunits gamma and tau domain III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12169
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF12169_DNA_polymerase_III_subunits_gamma_and_tau_domain_III


id: PF12437
description: Glutamine synthetase type III N terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12437
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF12437_Glutamine_synthetase_type_III_N_terminal_


id: PF12627
description: Probable RNA and SrmB- binding site of polymerase A
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12627
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF12627_Probable_RNA_and_SrmB-_binding_site_of_polymerase_A


id: PF12769
description: 4TM region of pyridine nucleotide transhydrogenase, mitoch
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12769
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF12769_4TM_region_of_pyridine_nucleotide_transhydrogenase,_mitoch


id: PF12771
description: Starch-binding associating with outer membrane
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12771
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF12771_Starch-binding_associating_with_outer_membrane


id: PF12850
description: Calcineurin-like phosphoesterase superfamily domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12850
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF12850_Calcineurin-like_phosphoesterase_superfamily_domain


id: PF12895
description: Anaphase-promoting complex, cyclosome, subunit 3
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12895
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF12895_Anaphase-promoting_complex,_cyclosome,_subunit_3


id: PF13085
description: 2Fe-2S iron-sulfur cluster binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13085
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF13085_2Fe-2S_iron-sulfur_cluster_binding_domain


id: PF13201
description: Putative carbohydrate metabolism domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13201
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF13201_Putative_carbohydrate_metabolism_domain


id: PF13231
description: Dolichyl-phosphate-mannose-protein mannosyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13231
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF13231_Dolichyl-phosphate-mannose-protein_mannosyltransferase


id: PF13243
description: Squalene-hopene cyclase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13243
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF13243_Squalene-hopene_cyclase_C-terminal_domain


id: PF13292
description: 1-deoxy-D-xylulose-5-phosphate synthase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13292
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF13292_1-deoxy-D-xylulose-5-phosphate_synthase


id: PF13304
description: AAA domain, putative AbiEii toxin, Type IV TA system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13304
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF13304_AAA_domain,_putative_AbiEii_toxin,_Type_IV_TA_system


id: PF13335
description: Magnesium chelatase, subunit ChlI C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13335
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF13335_Magnesium_chelatase,_subunit_ChlI_C-terminal


id: PF13385
description: Concanavalin A-like lectin/glucanases superfamily
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13385
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF13385_Concanavalin_A-like_lectin/glucanases_superfamily


id: PF13386
description: Cytochrome C biogenesis protein transmembrane region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13386
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF13386_Cytochrome_C_biogenesis_protein_transmembrane_region_


id: PF13442
description: Cytochrome C oxidase, cbb3-type, subunit III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13442
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF13442_Cytochrome_C_oxidase,_cbb3-type,_subunit_III_


id: PF13491
description: 4TM region of DNA translocase FtsK/SpoIIIE
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13491
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF13491_4TM_region_of_DNA_translocase_FtsK/SpoIIIE


id: PF13495
description: Phage integrase, N-terminal SAM-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13495
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF13495_Phage_integrase,_N-terminal_SAM-like_domain


id: PF13505
description: Outer membrane protein beta-barrel domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13505
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF13505_Outer_membrane_protein_beta-barrel_domain


id: PF13557
description: Putative MetA-pathway of phenol degradation
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13557
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF13557_Putative_MetA-pathway_of_phenol_degradation


id: PF13568
description: Outer membrane protein beta-barrel domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13568
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF13568_Outer_membrane_protein_beta-barrel_domain


id: PF13607
description: Succinyl-CoA ligase like flavodoxin domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13607
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF13607_Succinyl-CoA_ligase_like_flavodoxin_domain


id: PF13620
description: Carboxypeptidase regulatory-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13620
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF13620_Carboxypeptidase_regulatory-like_domain


id: PF13636
description: RNA-binding PUA-like domain of methyltransferase RsmF
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13636
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF13636_RNA-binding_PUA-like_domain_of_methyltransferase_RsmF


id: PF13669
description: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13669
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF13669_Glyoxalase/Bleomycin_resistance_protein/Dioxygenase_superfamily


id: PF13720
description: Udp N-acetylglucosamine O-acyltransferase; Domain 2
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13720
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF13720_Udp_N-acetylglucosamine_O-acyltransferase;_Domain_2


id: PF13723
description: Beta-ketoacyl synthase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13723
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF13723_Beta-ketoacyl_synthase,_N-terminal_domain


id: PF13738
description: Pyridine nucleotide-disulphide oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13738
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF13738_Pyridine_nucleotide-disulphide_oxidoreductase


id: PF13749
description: Putative ATP-dependent DNA helicase recG C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13749
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF13749_Putative_ATP-dependent_DNA_helicase_recG_C-terminal


id: PF13807
description: G-rich domain on putative tyrosine kinase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13807
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF13807_G-rich_domain_on_putative_tyrosine_kinase


id: PF13813
description: Membrane bound O-acyl transferase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13813
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF13813_Membrane_bound_O-acyl_transferase_family


id: PF14399
description: Butirosin biosynthesis protein H, N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14399
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF14399_Butirosin_biosynthesis_protein_H,_N-terminal


id: PF14511
description: Type II restriction endonuclease EcoO109I
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14511
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF14511_Type_II_restriction_endonuclease_EcoO109I


id: PF14572
description: Phosphoribosyl synthetase-associated domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14572
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF14572_Phosphoribosyl_synthetase-associated_domain


id: PF14602
description: Hexapeptide repeat of succinyl-transferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14602
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF14602_Hexapeptide_repeat_of_succinyl-transferase


id: PF14667
description: Polysaccharide biosynthesis C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14667
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF14667_Polysaccharide_biosynthesis_C-terminal_domain


id: PF14693
description: Ribosomal protein TL5, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14693
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF14693_Ribosomal_protein_TL5,_C-terminal_domain


id: PF14696
description: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14696
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF14696_Hydroxyphenylpyruvate_dioxygenase,_HPPD,_N-terminal_


id: PF14714
description: KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14714
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF14714_KH-domain-like_of_EngA_bacterial_GTPase_enzymes,_C-terminal


id: PF14715
description: N-terminal domain of cytochrome oxidase-cbb3, FixP
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14715
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF14715_N-terminal_domain_of_cytochrome_oxidase-cbb3,_FixP_


id: PF14730
description: Domain of unknown function (DUF4468) with TBP-like fold
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14730
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF14730_Domain_of_unknown_function_(DUF4468)_with_TBP-like_fold


id: PF14805
description: Tetrahydrodipicolinate N-succinyltransferase N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14805
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF14805_Tetrahydrodipicolinate_N-succinyltransferase_N-terminal


id: PF14870
description: Photosynthesis system II assembly factor YCF48
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14870
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF14870_Photosynthesis_system_II_assembly_factor_YCF48


id: PF14873
description: N-terminal domain of BNR-repeat neuraminidase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14873
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF14873_N-terminal_domain_of_BNR-repeat_neuraminidase


id: PF14905
description: Outer membrane protein beta-barrel family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14905
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF14905_Outer_membrane_protein_beta-barrel_family


id: PF15919
description: HicB_like antitoxin of bacterial toxin-antitoxin system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF15919
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF15919_HicB_like_antitoxin_of_bacterial_toxin-antitoxin_system


id: PF16078
description: 2-oxoglutarate dehydrogenase N-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16078
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF16078_2-oxoglutarate_dehydrogenase_N-terminus


id: PF16177
description: Acetyl-coenzyme A synthetase N-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16177
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF16177_Acetyl-coenzyme_A_synthetase_N-terminus


id: PF16197
description: Ketoacyl-synthetase C-terminal extension
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16197
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF16197_Ketoacyl-synthetase_C-terminal_extension


id: PF16320
description: Ribosomal protein L7/L12 dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16320
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF16320_Ribosomal_protein_L7/L12_dimerisation_domain


id: PF16327
description: Cytochrome c-type biogenesis protein CcmF C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16327
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF16327_Cytochrome_c-type_biogenesis_protein_CcmF_C-terminal


id: PF16491
description: CAAX prenyl protease N-terminal, five membrane helices
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16491
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF16491_CAAX_prenyl_protease_N-terminal,_five_membrane_helices


id: PF16653
description: Saccharopine dehydrogenase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16653
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF16653_Saccharopine_dehydrogenase_C-terminal_domain


id: PF16658
description: Class II release factor RF3, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16658
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF16658_Class_II_release_factor_RF3,_C-terminal_domain


id: PF16822
description: SGNH hydrolase-like domain, acetyltransferase AlgX
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16822
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF16822_SGNH_hydrolase-like_domain,_acetyltransferase_AlgX


id: PF16870
description: 2-oxoglutarate dehydrogenase C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16870
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF16870_2-oxoglutarate_dehydrogenase_C-terminal


id: PF16881
description: N-terminal domain of lipoyl synthase of Radical_SAM family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16881
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF16881_N-terminal_domain_of_lipoyl_synthase_of_Radical_SAM_family


id: PF16916
description: Dimerisation domain of Zinc Transporter
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16916
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF16916_Dimerisation_domain_of_Zinc_Transporter


id: PF17125
description: N-terminal domain of 16S rRNA methyltransferase RsmF
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17125
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF17125_N-terminal_domain_of_16S_rRNA_methyltransferase_RsmF


id: PF17136
description: Ribosomal proteins 50S L24/mitochondrial 39S L24
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17136
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF17136_Ribosomal_proteins_50S_L24/mitochondrial_39S_L24


id: PF17147
description: Pyruvate:ferredoxin oxidoreductase core domain II
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17147
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF17147_Pyruvate:ferredoxin_oxidoreductase_core_domain_II


id: PF17164
description: Domain of unknown function (DUF5122) beta-propeller
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17164
name:
  Protein Domains (Pfam).STRING_v12.0_1617421_STRINGid_PF17164_Domain_of_unknown_function_(DUF5122)_beta-propeller


id: SM00042
description: Domain first found in C1r, C1s, uEGF, and bone morphogenetic protein.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00042
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00042_Domain_first_found_in_C1r,_C1s,_uEGF,_and_bone_morphogenetic_protein.


id: SM00046
description: Diacylglycerol kinase catalytic domain (presumed)
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00046
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00046_Diacylglycerol_kinase_catalytic_domain_(presumed)


id: SM00065
description: Domain present in phytochromes and cGMP-specific phosphodiesterases.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00065
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00065_Domain_present_in_phytochromes_and_cGMP-specific_phosphodiesterases.


id: SM00086
description: Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00086
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00086_Motif_C-terminal_to_PAS_motifs_(likely_to_contribute_to_PAS_structural_domain)


id: SM00089
description: Repeats in polycystic kidney disease 1 (PKD1) and other proteins
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00089
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00089_Repeats_in_polycystic_kidney_disease_1_(PKD1)_and_other_proteins


id: SM00100
description: Cyclic nucleotide-monophosphate binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00100
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00100_Cyclic_nucleotide-monophosphate_binding_domain


id: SM00116
description: Domain in cystathionine beta-synthase and other proteins.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00116
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00116_Domain_in_cystathionine_beta-synthase_and_other_proteins.


id: SM00226
description: Low molecular weight phosphatase family
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00226
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00226_Low_molecular_weight_phosphatase_family


id: SM00228
description: Domain present in PSD-95, Dlg, and ZO-1/2.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00228
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00228_Domain_present_in_PSD-95,_Dlg,_and_ZO-1/2.


id: SM00271
description: DnaJ molecular chaperone homology domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00271
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00271_DnaJ_molecular_chaperone_homology_domain


id: SM00278
description: Helix-hairpin-helix DNA-binding motif class 1
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00278
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00278_Helix-hairpin-helix_DNA-binding_motif_class_1


id: SM00279
description: Helix-hairpin-helix class 2 (Pol1 family) motifs
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00279
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00279_Helix-hairpin-helix_class_2_(Pol1_family)_motifs


id: SM00298
description: Chromatin organization modifier domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00298
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00298_Chromatin_organization_modifier_domain


id: SM00304
description: HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00304
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00304_HAMP_(Histidine_kinases,_Adenylyl_cyclases,_Methyl_binding_proteins,_Phosphatases)_domain


id: SM00316
description: Ribosomal protein S1-like RNA-binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00316
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00316_Ribosomal_protein_S1-like_RNA-binding_domain


id: SM00327
description: Von Willebrand factor (vWF) type A domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00327
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00327_Von_Willebrand_factor_(vWF)_type_A_domain


id: SM00342
description: Helix_turn_helix, arabinose operon control protein
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00342
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00342_Helix_turn_helix,_arabinose_operon_control_protein


id: SM00347
description: Helix_turn_helix multiple antibiotic resistance protein
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00347
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00347_Helix_turn_helix_multiple_antibiotic_resistance_protein


id: SM00359
description: Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00359
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00359_Putative_RNA-binding_Domain_in_PseudoUridine_synthase_and_Archaeosine_transglycosylase


id: SM00369
description: Leucine-rich repeats, typical (most populated) subfamily
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00369
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00369_Leucine-rich_repeats,_typical_(most_populated)_subfamily


id: SM00382
description: ATPases associated with a variety of cellular activities
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00382
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00382_ATPases_associated_with_a_variety_of_cellular_activities


id: SM00411
description: Bacterial (prokaryotic) histone like domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00411
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00411_Bacterial_(prokaryotic)_histone_like_domain


id: SM00418
description: Helix_turn_helix, Arsenical Resistance Operon Repressor
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00418
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00418_Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor


id: SM00419
description: Helix_turn_helix, cAMP Regulatory protein
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00419
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00419_Helix_turn_helix,_cAMP_Regulatory_protein


id: SM00436
description: Bacterial DNA topoisomeraes I ATP-binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00436
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00436_Bacterial_DNA_topoisomeraes_I_ATP-binding_domain


id: SM00437
description: Bacterial DNA topoisomerase I DNA-binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00437
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00437_Bacterial_DNA_topoisomerase_I_DNA-binding_domain


id: SM00464
description: Found in ATP-dependent protease La (LON)
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00464
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00464_Found_in_ATP-dependent_protease_La_(LON)


id: SM00471
description: Metal dependent phosphohydrolases with conserved HD motif.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00471
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00471_Metal_dependent_phosphohydrolases_with_conserved_HD_motif.


id: SM00479
description: Exonuclease domain in DNA-polymerase alpha and epsilon chain, ribonuclease T and other exonucleases
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00479
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00479_Exonuclease_domain_in_DNA-polymerase_alpha_and_epsilon_chain,_ribonuclease_T_and_other_exonucleases


id: SM00481
description: DNA polymerase alpha chain like domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00481
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00481_DNA_polymerase_alpha_chain_like_domain


id: SM00490
description: Helicase superfamily c-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00490
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00490_Helicase_superfamily_c-terminal_domain


id: SM00493
description: Topoisomerases, DnaG-type primases, OLD family nucleases and RecR proteins
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00493
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00493_Topoisomerases,_DnaG-type_primases,_OLD_family_nucleases_and_RecR_proteins


id: SM00525
description: Iron-sulpphur binding domain in DNA-(apurinic or apyrimidinic site) lyase (subfamily of ENDO3)
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00525
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00525_Iron-sulpphur_binding_domain_in_DNA-(apurinic_or_apyrimidinic_site)_lyase_(subfamily_of_ENDO3)


id: SM00530
description: Helix-turn-helix XRE-family like proteins
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00530
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00530_Helix-turn-helix_XRE-family_like_proteins


id: SM00533
description: DNA-binding domain of DNA mismatch repair MUTS family
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00533
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00533_DNA-binding_domain_of_DNA_mismatch_repair_MUTS_family


id: SM00534
description: ATPase domain of DNA mismatch repair MUTS family
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00534
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00534_ATPase_domain_of_DNA_mismatch_repair_MUTS_family


id: SM00554
description: Four repeated domains in the Fasciclin I family of proteins, present in many other contexts.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00554
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00554_Four_repeated_domains_in_the_Fasciclin_I_family_of_proteins,_present_in_many_other_contexts.


id: SM00558
description: A domain family that is part of the cupin metalloenzyme superfamily.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00558
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00558_A_domain_family_that_is_part_of_the_cupin_metalloenzyme_superfamily.


id: SM00562
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00562
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00562_These_are_enzymes_that_catalyze_nonsubstrate_specific_conversions_of_nucleoside_diphosphates_to_nucleoside_triphosphates._These_enzymes_play_important_roles_in_bacterial_growth,_signal_transduction_and_pathogenicity.

description:
  These are enzymes that catalyze nonsubstrate specific conversions of nucleoside diphosphates to nucleoside triphosphates. These enzymes play important roles in bacterial growth, signal transduction and pathogenicity.


id: SM00670
description: Large family of predicted nucleotide-binding domains
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00670
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00670_Large_family_of_predicted_nucleotide-binding_domains


id: SM00698
description: Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00698
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00698_Possible_plasma_membrane-binding_motif_in_junctophilins,_PIP-5-kinases_and_protein_kinases.


id: SM00729
description: Elongator protein 3, MiaB family, Radical SAM
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00729
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00729_Elongator_protein_3,_MiaB_family,_Radical_SAM


id: SM00732
description: Likely ribonuclease with RNase H fold.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00732
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00732_Likely_ribonuclease_with_RNase_H_fold.


id: SM00738
description: In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00738
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00738_In_Spt5p,_this_domain_may_confer_affinity_for_Spt4p._It_possesses_a_RNP-like_fold.


id: SM00739
description: KOW (Kyprides, Ouzounis, Woese) motif.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00739
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00739_KOW_(Kyprides,_Ouzounis,_Woese)_motif.


id: SM00760
description: Bacterial dnaA protein helix-turn-helix domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00760
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00760_Bacterial_dnaA_protein_helix-turn-helix_domain


id: SM00827
description: Acyl transferase domain in polyketide synthase (PKS) enzymes.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00827
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00827_Acyl_transferase_domain_in_polyketide_synthase_(PKS)_enzymes.


id: SM00839
description: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00839
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00839_Glutamate/Leucine/Phenylalanine/Valine_dehydrogenase


id: SM00840
description: This DALR domain is found in cysteinyl-tRNA-synthetases.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00840
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00840_This_DALR_domain_is_found_in_cysteinyl-tRNA-synthetases.


id: SM00843
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00843
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00843_This_domain_directs_oriented_DNA_translocation_and_forms_a_winged_helix_structure._Mutated_proteins_with_substitutions_in_the_FtsK_gamma_DNA-recognition_helix_are_impaired_in_DNA_binding.

description:
  This domain directs oriented DNA translocation and forms a winged helix structure. Mutated proteins with substitutions in the FtsK gamma DNA-recognition helix are impaired in DNA binding.


id: SM00846
description: Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00846
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00846_Glyceraldehyde_3-phosphate_dehydrogenase,_NAD_binding_domain


id: SM00859
description: Semialdehyde dehydrogenase, NAD binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00859
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00859_Semialdehyde_dehydrogenase,_NAD_binding_domain


id: SM00861
description: Transketolase, pyrimidine binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00861
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00861_Transketolase,_pyrimidine_binding_domain


id: SM00862
description: Transcriptional regulatory protein, C terminal
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00862
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00862_Transcriptional_regulatory_protein,_C_terminal


id: SM00863
description: Threonyl and Alanyl tRNA synthetase second additional domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00863
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00863_Threonyl_and_Alanyl_tRNA_synthetase_second_additional_domain


id: SM00865
description: Tubulin/FtsZ family, C-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00865
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00865_Tubulin/FtsZ_family,_C-terminal_domain


id: SM00870
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00870
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00870_Asparaginase,_which_is_found_in_various_plant,_animal_and_bacterial_cells,_catalyses_the_deamination_of_asparagine_to_yield_aspartic_acid_and_an_ammonium_ion,_resulting_in_a_depletion_of_free_circulatory_asparagine_in_plasma_PUBMED:3026924._The_...

description:
  Asparaginase, which is found in various plant, animal and bacterial cells, catalyses the deamination of asparagine to yield aspartic acid and an ammonium ion, resulting in a depletion of free circulatory asparagine in plasma PUBMED:3026924. The ...


id: SM00871
description: Bacterial transcription activator, effector binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00871
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00871_Bacterial_transcription_activator,_effector_binding_domain


id: SM00896
description: Ferredoxin-fold anticodon binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00896
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00896_Ferredoxin-fold_anticodon_binding_domain


id: SM00922
description: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00922
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00922_Mandelate_racemase_/_muconate_lactonizing_enzyme,_C-terminal_domain


id: SM00928
description: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00928
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00928_NADH-ubiquinone_oxidoreductase-F_iron-sulfur_binding_region


id: SM00929
description: NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00929
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00929_NADH-ubiquinone_oxidoreductase-G_iron-sulfur_binding_region


id: SM00934
description: Orotidine 5-phosphate decarboxylase / HUMPS family
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00934
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00934_Orotidine_5-phosphate_decarboxylase_/_HUMPS_family


id: SM00937
description: This domain is found in peptide chain release factors.
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00937
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00937_This_domain_is_found_in_peptide_chain_release_factors.


id: SM00950
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00950
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00950_This_domain_is_found_in_the_protein_Piwi_and_its_relatives._The_function_of_this_domain_is_the_dsRNA_guided_hydrolysis_of_ssRNA._Determination_of_the_crystal_structure_of_Argonaute_reveals_that_PIWI_is_an_RNase_H_domain,_and_identifies_Argonaute_as_...

description:
  This domain is found in the protein Piwi and its relatives. The function of this domain is the dsRNA guided hydrolysis of ssRNA. Determination of the crystal structure of Argonaute reveals that PIWI is an RNase H domain, and identifies Argonaute as ...


id: SM00955
description: This domain is the catalytic domain of ribonuclease II.PUBMED:16806266
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00955
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00955_This_domain_is_the_catalytic_domain_of_ribonuclease_II.PUBMED:16806266


id: SM00956
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00956
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00956_This_DNA-binding_domain_is_found_in_the_RecQ_helicase_among_others_and_has_a_helix-turn-helix_structure._The_RQC_domain,_found_only_in_RecQ_family_enzymes,_is_a_high_affinity_G4_DNA_binding_domain_PUBMED:16530788.

description:
  This DNA-binding domain is found in the RecQ helicase among others and has a helix-turn-helix structure. The RQC domain, found only in RecQ family enzymes, is a high affinity G4 DNA binding domain PUBMED:16530788.


id: SM00959
description: Rho termination factor, N-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00959
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00959_Rho_termination_factor,_N-terminal_domain


id: SM00963
description: SRP54-type protein, helical bundle domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00963
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00963_SRP54-type_protein,_helical_bundle_domain


id: SM00967
description: RNA 2-O ribose methyltransferase substrate binding
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00967
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00967_RNA_2-O_ribose_methyltransferase_substrate_binding


id: SM00981
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00981
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00981_The_THUMP_domain_is_named_after_after_thiouridine_synthases,_methylases_and_PSUSs_PUBMED:11295541._The_THUMP_domain_consists_of_about_110_amino_acid_residues._The_structure_of_ThiI_reveals_that_the_THUMP_has_a_fold_unlike_that_of_previously_...

description:
  The THUMP domain is named after after thiouridine synthases, methylases and PSUSs PUBMED:11295541. The THUMP domain consists of about 110 amino acid residues. The structure of ThiI reveals that the THUMP has a fold unlike that of previously ...


id: SM00982
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00982
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00982_This_domain_is_found_in_proteins_necessary_for_strand-specific_repair_in_DNA_such_as_TRCF_in_Escherichia_coli._A_lesion_in_the_template_strand_blocks_the_RNA_polymerase_complex_(RNAP)._The_RNAP-DNA-RNA_complex_is_specifically_recognised_by_the_...

description:
  This domain is found in proteins necessary for strand-specific repair in DNA such as TRCF in Escherichia coli. A lesion in the template strand blocks the RNA polymerase complex (RNAP). The RNAP-DNA-RNA complex is specifically recognised by the ...


id: SM00987
description: UreE urease accessory protein, C-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00987
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00987_UreE_urease_accessory_protein,_C-terminal_domain


id: SM00997
description: S-adenosyl-L-homocysteine hydrolase, NAD binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM00997
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM00997_S-adenosyl-L-homocysteine_hydrolase,_NAD_binding_domain


id: SM01002
description: Alanine dehydrogenase/PNT, C-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01002
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM01002_Alanine_dehydrogenase/PNT,_C-terminal_domain


id: SM01003
description: Alanine dehydrogenase/PNT, N-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01003
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM01003_Alanine_dehydrogenase/PNT,_N-terminal_domain


id: SM01016
description: Arginyl tRNA synthetase N terminal dom
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01016
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM01016_Arginyl_tRNA_synthetase_N_terminal_dom


id: SM01086
description: C-terminal, D2-small domain, of ClpB protein
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01086
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM01086_C-terminal,_D2-small_domain,_of_ClpB_protein


id: SM01096
description: Carbamoyl-phosphate synthetase large chain, oligomerisation domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01096
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM01096_Carbamoyl-phosphate_synthetase_large_chain,_oligomerisation_domain


id: SM01097
description: Carbamoyl-phosphate synthase small chain, CPSase domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01097
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM01097_Carbamoyl-phosphate_synthase_small_chain,_CPSase_domain


id: SM01209
description: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01209
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM01209_Phosphoribosylglycinamide_synthetase,_ATP-grasp_(A)_domain


id: SM01210
description: Phosphoribosylglycinamide synthetase, C domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01210
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM01210_Phosphoribosylglycinamide_synthetase,_C_domain


id: SM01211
description: CobB/CobQ-like glutamine amidotransferase domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01211
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM01211_CobB/CobQ-like_glutamine_amidotransferase_domain


id: SM01222
description: Formiminotransferase domain, N-terminal subdomain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01222
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM01222_Formiminotransferase_domain,_N-terminal_subdomain


id: SM01230
description: Glutamine synthetase, catalytic domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01230
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM01230_Glutamine_synthetase,_catalytic_domain


id: SM01234
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01234
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM01234_This_domain_has_haemolytic_activity_(PMID:19306042)._It_is_found_in_short_(73-103_amino_acid)_proteins_and_contains_three_conserved_cysteine_residues.

description:
  This domain has haemolytic activity (PMID:19306042). It is found in short (73-103 amino acid) proteins and contains three conserved cysteine residues.


id: SM01329
description: Isocitrate/isopropylmalate dehydrogenase
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01329
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM01329_Isocitrate/isopropylmalate_dehydrogenase


id: SM01340
description: DNA mismatch repair protein, C-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01340
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM01340_DNA_mismatch_repair_protein,_C-terminal_domain


id: SM01382
description: Ribosomal Proteins L2, C-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01382
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM01382_Ribosomal_Proteins_L2,_C-terminal_domain


id: SM01383
description: Ribosomal Proteins L2, RNA binding domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01383
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM01383_Ribosomal_Proteins_L2,_RNA_binding_domain


id: SM01390
description: Ribosomal protein S4/S9 N-terminal domain
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01390
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM01390_Ribosomal_protein_S4/S9_N-terminal_domain


id: SM01400
description: N-terminal domain of ribose phosphate pyrophosphokinase
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01400
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM01400_N-terminal_domain_of_ribose_phosphate_pyrophosphokinase


id: SM01419
description: Alpha-macro-globulin thiol-ester bond-forming region
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01419
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM01419_Alpha-macro-globulin_thiol-ester_bond-forming_region


id: SM01477
description: DDE transposase retroviral integrase sub-family
memo: https://smart.embl.de/smart/do_annotation.pl?ACC=SM01477
name:
  Protein Domains (SMART).STRING_v12.0_1617421_STRINGid_SM01477_DDE_transposase_retroviral_integrase_sub-family


