# geneInfo

ensembl_gene_id: FCOL_00015
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: FCOL_00030
symbol: AEW84863.1
gene_biotype: protein_coding
description:
  Crp/Fnr family transcriptional regulator; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.


ensembl_gene_id: FCOL_00065
symbol: AEW84870.1
gene_biotype: protein_coding
description:
  COG0776 Bacterial nucleoid DNA-binding protein; Belongs to the bacterial histone-like protein family.


ensembl_gene_id: FCOL_00075
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH dehydrogenase I subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: FCOL_00080
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: FCOL_00085
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH dehydrogenase I, C subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: FCOL_00090
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH dehydrogenase I subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: FCOL_00100
symbol: AEW84877.1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.


ensembl_gene_id: FCOL_00110
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH dehydrogenase I, H subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: FCOL_00120
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase, chain I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: FCOL_00125
symbol: AEW84882.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase I, J subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: FCOL_00130
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH dehydrogenase I, K subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: FCOL_00135
symbol: AEW84884.1
gene_biotype: protein_coding
description:
  COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit.


ensembl_gene_id: FCOL_00145
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH dehydrogenase I, N subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: FCOL_00160
symbol: AEW84889.1
gene_biotype: protein_coding
description:
  Molybdopterin oxidoreductase, iron-sulfur binding subunit; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.


ensembl_gene_id: FCOL_00190
symbol: AEW84895.1
gene_biotype: protein_coding
description:
  COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: FCOL_00210
symbol: AEW84899.1
gene_biotype: protein_coding
description:
  Putative ABC transporter ATPase and permease; COG4987 ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components.


ensembl_gene_id: FCOL_00255
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: FCOL_00260
symbol: lpxC
gene_biotype: protein_coding
description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the thioester dehydratase family. FabZ subfamily.


ensembl_gene_id: FCOL_00265
symbol: AEW84908.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: FCOL_00270
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: FCOL_00280
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: FCOL_00290
symbol: AEW84913.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).


ensembl_gene_id: FCOL_00305
symbol: lon
gene_biotype: protein_coding
description:
  Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: FCOL_00325
symbol: rpsA
gene_biotype: protein_coding
description:
  30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.


ensembl_gene_id: FCOL_00335
symbol: pyrB
gene_biotype: protein_coding
description:
  COG0540 Aspartate carbamoyltransferase, catalytic chain; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: FCOL_00360
symbol: AEW84927.1
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: FCOL_00370
symbol: rnz
gene_biotype: protein_coding
description:
  Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.


ensembl_gene_id: FCOL_00375
symbol: pdxH
gene_biotype: protein_coding
description:
  Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).


ensembl_gene_id: FCOL_00380
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: FCOL_00390
symbol: clpB
gene_biotype: protein_coding
description:
  ATPase; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: FCOL_00395
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: FCOL_00405
symbol: AEW84936.1
gene_biotype: protein_coding
description:
  Major intrinsic protein; COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family); Belongs to the MIP/aquaporin (TC 1.A.8) family.


ensembl_gene_id: FCOL_00410
symbol: AEW84937.1
gene_biotype: protein_coding
description:
  COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: FCOL_00415
symbol: nth
gene_biotype: protein_coding
description:
  DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: FCOL_00445
symbol: crcB
gene_biotype: protein_coding
description:
  Hypothetical protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: FCOL_00470
symbol: AEW84949.1
gene_biotype: protein_coding
description:
  COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: FCOL_00490
symbol: AEW84953.1
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine cyclo-ligase; COG0150 Phosphoribosylaminoimidazole (AIR) synthetase.


ensembl_gene_id: FCOL_00505
symbol: selO
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.


ensembl_gene_id: FCOL_00520
symbol: AEW84959.1
gene_biotype: protein_coding
description:
  Ribosomal protein S6 modification protein RimK; COG4067 Uncharacterized protein conserved in archaea.


ensembl_gene_id: FCOL_00530
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: FCOL_00590
symbol: AEW84973.1
gene_biotype: protein_coding
description:
  Transcription termination factor-like protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: FCOL_00595
symbol: AEW84974.1
gene_biotype: protein_coding
description:
  COG0334 Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: FCOL_00600
symbol: AEW84975.1
gene_biotype: protein_coding
description:
  ABC transporter-like protein; COG1132 ABC-type multidrug transport system, ATPase and permease components.


ensembl_gene_id: FCOL_00625
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: FCOL_00640
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: FCOL_00650
symbol: AEW84983.2
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: FCOL_00660
symbol: rlmF
gene_biotype: protein_coding
description:
  23S rRNA mA1618 methyltransferase; Specifically methylates the adenine in position 1618 of 23S rRNA.


ensembl_gene_id: FCOL_00665
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: FCOL_00680
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: FCOL_00715
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: FCOL_00725
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: FCOL_00735
symbol: AEW84998.1
gene_biotype: protein_coding
description:
  Dps family ferritin; COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); Belongs to the Dps family.


ensembl_gene_id: FCOL_00755
symbol: AEW85002.2
gene_biotype: protein_coding
description:
  methionine-R-sulfoxide reductase; COG0229 Conserved domain frequently associated with peptide methionine sulfoxide reductase.


ensembl_gene_id: FCOL_00760
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: FCOL_00780
symbol: gcvT
gene_biotype: protein_coding
description:
  Glycine cleavage system aminomethyltransferase T; The glycine cleavage system catalyzes the degradation of glycine.


ensembl_gene_id: FCOL_00835
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: FCOL_00850
symbol: AEW85021.1
gene_biotype: protein_coding
description:
  Muconate cycloisomerase; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.


ensembl_gene_id: FCOL_00855
symbol: AEW85022.1
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: FCOL_00870
symbol: AEW85023.1
gene_biotype: protein_coding
description:
  2-dehydro-3-deoxyphosphooctonate aldolase; COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; Belongs to the KdsA family.


ensembl_gene_id: FCOL_00895
symbol: AEW85028.1
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase B; COG0144 tRNA and rRNA cytosine-C5-methylases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: FCOL_00910
symbol: AEW85031.1
gene_biotype: protein_coding
description:
  COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes.


ensembl_gene_id: FCOL_00920
symbol: AEW85033.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG1611 Predicted Rossmann fold nucleotide-binding protein; Belongs to the LOG family.


ensembl_gene_id: FCOL_00925
symbol: AEW85034.1
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: FCOL_00930
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: FCOL_00940
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: FCOL_00945
symbol: sucC
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: FCOL_00980
symbol: AEW85045.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: FCOL_01020
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: FCOL_01025
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: FCOL_01040
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: FCOL_01075
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: FCOL_01080
symbol: AEW85065.1
gene_biotype: protein_coding
description:
  COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: FCOL_01090
symbol: AEW85067.1
gene_biotype: protein_coding
description:
  Purine nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: FCOL_01095
symbol: lpxK
gene_biotype: protein_coding
description:
  Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: FCOL_01115
symbol: AEW85072.1
gene_biotype: protein_coding
description:
  COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: FCOL_01175
symbol: AEW85084.1
gene_biotype: protein_coding
description:
  COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: FCOL_01190
symbol: AEW85087.1
gene_biotype: protein_coding
description:
  Cytochrome oxidase assembly; COG1612 Uncharacterized protein required for cytochrome oxidase assembly.


ensembl_gene_id: FCOL_01195
symbol: AEW85088.1
gene_biotype: protein_coding
description:
  COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: FCOL_01205
symbol: AEW85090.1
gene_biotype: protein_coding
description:
  Bifunctional WbnG and putative acetyltransferase; COG0110 Acetyltransferase (isoleucine patch superfamily).


ensembl_gene_id: FCOL_01210
symbol: AEW85091.1
gene_biotype: protein_coding
description:
  DegT/DnrJ/EryC1/StrS family aminotransferase; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: FCOL_01225
symbol: AEW85094.1
gene_biotype: protein_coding
description:
  Glycosyl transferase, group 2 family protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.


ensembl_gene_id: FCOL_01265
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: FCOL_01305
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: FCOL_01310
symbol: AEW85111.1
gene_biotype: protein_coding
description:
  Two-component system response regulatory protein; COG3279 Response regulator of the LytR/AlgR family.


ensembl_gene_id: FCOL_01320
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: FCOL_01335
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: FCOL_01360
symbol: rsmI
gene_biotype: protein_coding
description:
  uroporphyrin-III C/tetrapyrrole methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: FCOL_01375
symbol: AEW85124.1
gene_biotype: protein_coding
description:
  Putative bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: FCOL_01380
symbol: mscL
gene_biotype: protein_coding
description:
  Large-conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: FCOL_01385
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: FCOL_01430
symbol: AEW85135.1
gene_biotype: protein_coding
description:
  Mtultidrug ABC transporter permease/ATPase; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.


ensembl_gene_id: FCOL_01460
symbol: AEW85141.1
gene_biotype: protein_coding
description:
  GTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: FCOL_01470
symbol: AEW85143.1
gene_biotype: protein_coding
description:
  COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: FCOL_01475
symbol: serC
gene_biotype: protein_coding
description:
  3-phosphoserine/phosphohydroxythreonine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.


ensembl_gene_id: FCOL_01495
symbol: AEW85148.2
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: FCOL_01525
symbol: AEW85154.1
gene_biotype: protein_coding
description:
  Putative nitric oxide reductase (Nor) complex membrane protein; COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.


ensembl_gene_id: FCOL_01540
symbol: AEW85157.1
gene_biotype: protein_coding
description:
  COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems.


ensembl_gene_id: FCOL_01560
symbol: AEW85161.1
gene_biotype: protein_coding
description:
  COG3256 Nitric oxide reductase large subunit; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: FCOL_01565
symbol: AEW85162.2
gene_biotype: protein_coding
description:
  Nitric oxide reductase, cytochrome c-containing subunit; COG2010 Cytochrome c, mono- and diheme variants.


ensembl_gene_id: FCOL_01570
symbol: AEW85163.1
gene_biotype: protein_coding
description:
  Hemerythrin HHE cation binding domain-containing protein; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.


ensembl_gene_id: FCOL_01580
symbol: AEW85165.1
gene_biotype: protein_coding
description:
  COG4992 Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: FCOL_01635
symbol: cas9
gene_biotype: protein_coding
description:
  Putative CRISPR-associated (Cas) protein; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans- encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and thi [...]


ensembl_gene_id: FCOL_01650
symbol: cas1
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: FCOL_01680
symbol: AEW85185.1
gene_biotype: protein_coding
description:
  MutS family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity. Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: FCOL_01695
symbol: AEW85188.1
gene_biotype: protein_coding
description:
  Sugar O-acetyltransferase; COG1696 Predicted membrane protein involved in D-alanine export; Belongs to the membrane-bound acyltransferase family.


ensembl_gene_id: FCOL_01705
symbol: ung
gene_biotype: protein_coding
description:
  uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: FCOL_01725
symbol: AEW85194.1
gene_biotype: protein_coding
description:
  Putative ribosomal-protein-amino-acid N-acetyltransferase; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.


ensembl_gene_id: FCOL_01730
symbol: AEW85195.1
gene_biotype: protein_coding
description:
  Ribosomal-protein-amino-adic N-acetyltransferase; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.


ensembl_gene_id: FCOL_01745
symbol: AEW85198.1
gene_biotype: protein_coding
description:
  Putative oxidoreductase; COG3491 Isopenicillin N synthase and related dioxygenases; Belongs to the iron/ascorbate-dependent oxidoreductase family.


ensembl_gene_id: FCOL_01750
symbol: AEW85199.1
gene_biotype: protein_coding
description:
  COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit.


ensembl_gene_id: FCOL_01795
symbol: AEW85208.1
gene_biotype: protein_coding
description:
  ECF subfamily RNA polymerase sigma-24 factor; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: FCOL_01805
symbol: AEW85210.1
gene_biotype: protein_coding
description:
  Alanine racemase; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: FCOL_01880
symbol: AEW85225.1
gene_biotype: protein_coding
description:
  CRP/FNR family transcriptional regulator; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.


ensembl_gene_id: FCOL_01905
symbol: guaB
gene_biotype: protein_coding
description:
  IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: FCOL_01920
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2 (RF-2); Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: FCOL_01930
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: FCOL_01965
symbol: rsfS
gene_biotype: protein_coding
description:
  Iojap family protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: FCOL_01970
symbol: ftsH
gene_biotype: protein_coding
description:
  Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: FCOL_02015
symbol: AEW85252.1
gene_biotype: protein_coding
description:
  Thiol:disulfide interchange protein, C-terminal region; COG0526 Thiol-disulfide isomerase and thioredoxins.


ensembl_gene_id: FCOL_02030
symbol: AEW85255.1
gene_biotype: protein_coding
description:
  Molybdopterin biosynthesis protein MoeA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: FCOL_02040
symbol: mobA
gene_biotype: protein_coding
description:
  Molybdopterin-guanine dinucleotide biosynthesis protein A-like protein; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.


ensembl_gene_id: FCOL_02050
symbol: AEW85259.1
gene_biotype: protein_coding
description:
  Rhodanese-like protein; COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2.


ensembl_gene_id: FCOL_02070
symbol: AEW85261.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate; Belongs to the radical SAM superfamily. MoaA family.


ensembl_gene_id: FCOL_02090
symbol: AEW85265.1
gene_biotype: protein_coding
description:
  Nitrate reductase; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: FCOL_02120
symbol: AEW85271.1
gene_biotype: protein_coding
description:
  OmpA/MotB domain-containing protein; COG0823 Periplasmic component of the Tol biopolymer transport system.


ensembl_gene_id: FCOL_02155
symbol: AEW85278.1
gene_biotype: protein_coding
description:
  Membrane bound O-acyl transferase, MBOAT family protein; COG1696 Predicted membrane protein involved in D-alanine export; Belongs to the membrane-bound acyltransferase family.


ensembl_gene_id: FCOL_02160
symbol: AEW85279.1
gene_biotype: protein_coding
description:
  acetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.


ensembl_gene_id: FCOL_02170
symbol: AEW85281.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG2905 Predicted signal-transduction protein containing cAMP-binding and CBS domains.


ensembl_gene_id: FCOL_02185
symbol: kup
gene_biotype: protein_coding
description:
  Potassium transport system protein Kup; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family.


ensembl_gene_id: FCOL_02220
symbol: AEW85291.1
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins.


ensembl_gene_id: FCOL_02225
symbol: AEW85292.1
gene_biotype: protein_coding
description:
  Translation intitiation regulation protein; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.


ensembl_gene_id: FCOL_02235
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: FCOL_02255
symbol: AEW85298.1
gene_biotype: protein_coding
description:
  O-succinylbenzoate synthase; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily; Belongs to the mandelate racemase/muconate lactonizing enzyme family.


ensembl_gene_id: FCOL_02270
symbol: menA
gene_biotype: protein_coding
description:
  1,4-dihydroxy-2-naphthoateoctaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.


ensembl_gene_id: FCOL_02275
symbol: menB
gene_biotype: protein_coding
description:
  Naphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.


ensembl_gene_id: FCOL_02290
symbol: pepT
gene_biotype: protein_coding
description:
  Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.


ensembl_gene_id: FCOL_02300
symbol: AEW85307.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: FCOL_02315
symbol: AEW85310.1
gene_biotype: protein_coding
description:
  DegT/DnrJ/EryC1/StrS aminotransferase; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: FCOL_02325
symbol: AEW85312.1
gene_biotype: protein_coding
description:
  tRNA/rRNA methyltransferase SpoU; COG0566 rRNA methylases; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: FCOL_02330
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: FCOL_02385
symbol: AEW85324.1
gene_biotype: protein_coding
description:
  Cobaltochelatase, CobN subunit; COG1429 Cobalamin biosynthesis protein CobN and related Mg-chelatases.


ensembl_gene_id: FCOL_02405
symbol: cbiD
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CbiD; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.


ensembl_gene_id: FCOL_02465
symbol: cobD
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: FCOL_02475
symbol: cobQ
gene_biotype: protein_coding
description:
  Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: FCOL_02480
symbol: AEW85343.1
gene_biotype: protein_coding
description:
  GHMP kinase; COG4542 Protein involved in propanediol utilization, and related proteins (includes coumermycin biosynthetic protein), possible kinase.


ensembl_gene_id: FCOL_02485
symbol: cbiA
gene_biotype: protein_coding
description:
  Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: FCOL_02620
symbol: AEW85369.1
gene_biotype: protein_coding
description:
  Restriction modification system DNA specificity domain-containing protein; COG0732 Restriction endonuclease S subunits.


ensembl_gene_id: FCOL_02625
symbol: AEW85370.1
gene_biotype: protein_coding
description:
  COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases.


ensembl_gene_id: FCOL_02655
symbol: ribB
gene_biotype: protein_coding
description:
  Bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.


ensembl_gene_id: FCOL_02680
symbol: tpx
gene_biotype: protein_coding
description:
  Thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.


ensembl_gene_id: FCOL_02740
symbol: AEW85393.1
gene_biotype: protein_coding
description:
  Ohr subfamily peroxiredoxin; COG1764 Predicted redox protein, regulator of disulfide bond formation.


ensembl_gene_id: FCOL_02755
symbol: AEW85396.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG2342 Predicted extracellular endo alpha-1,4 polygalactosaminidase or related polysaccharide hydrolase.


ensembl_gene_id: FCOL_02765
symbol: AEW85398.1
gene_biotype: protein_coding
description:
  Putative ABC transporter ATP-binding protein; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.


ensembl_gene_id: FCOL_02810
symbol: AEW85407.1
gene_biotype: protein_coding
description:
  LytTR family two component transcriptional regulator; COG3279 Response regulator of the LytR/AlgR family.


ensembl_gene_id: FCOL_02825
symbol: AEW85410.1
gene_biotype: protein_coding
description:
  Signal transduction histidine kinase LytS; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.


ensembl_gene_id: FCOL_02870
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase 2; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: FCOL_02875
symbol: rlmH
gene_biotype: protein_coding
description:
  rRNA large subunit methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: FCOL_02920
symbol: yidC
gene_biotype: protein_coding
description:
  Membrane protein insertase; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: FCOL_02925
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: FCOL_02940
symbol: AEW85433.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).


ensembl_gene_id: FCOL_02945
symbol: AEW85434.1
gene_biotype: protein_coding
description:
  Peptidoglycan-binding LysM; COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).


ensembl_gene_id: FCOL_02960
symbol: AEW85437.1
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS domain-containing protein; COG0249 Mismatch repair ATPase (MutS family).


ensembl_gene_id: FCOL_02985
symbol: AEW85442.1
gene_biotype: protein_coding
description:
  RND family efflux transporter MFP subunit; COG0845 Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: FCOL_02990
symbol: AEW85443.1
gene_biotype: protein_coding
description:
  Putative multidrug resistance protein; COG3696 Putative silver efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: FCOL_03000
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: FCOL_03010
symbol: AEW85447.1
gene_biotype: protein_coding
description:
  Non-specific serine/threonine protein kinase; COG0553 Superfamily II DNA/RNA helicases, SNF2 family.


ensembl_gene_id: FCOL_03095
symbol: gidB
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: FCOL_03135
symbol: AEW85472.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: FCOL_03160
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: FCOL_03200
symbol: AEW85485.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).


ensembl_gene_id: FCOL_03205
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: FCOL_03220
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: FCOL_03225
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: FCOL_03285
symbol: AEW85501.1
gene_biotype: protein_coding
description:
  GCN5-like N-acetyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.


ensembl_gene_id: FCOL_03290
symbol: AEW85502.1
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: FCOL_03360
symbol: tatA
gene_biotype: protein_coding
description:
  Sec-independent protein translocase (twin-arginine translocation protein); Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: FCOL_03380
symbol: rlmN
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: FCOL_03395
symbol: AEW85521.1
gene_biotype: protein_coding
description:
  Phospho-2-dehydro-3-deoxyheptonate aldolase; COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase.


ensembl_gene_id: FCOL_03400
symbol: rsgA
gene_biotype: protein_coding
description:
  GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: FCOL_03405
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: FCOL_03415
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: FCOL_03420
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: FCOL_03430
symbol: kynU
gene_biotype: protein_coding
description:
  Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.


ensembl_gene_id: FCOL_03440
symbol: AEW85530.1
gene_biotype: protein_coding
description:
  Agmatinase; COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family.


ensembl_gene_id: FCOL_03450
symbol: kmo
gene_biotype: protein_coding
description:
  Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily.


ensembl_gene_id: FCOL_03500
symbol: queE
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: FCOL_03530
symbol: AEW85548.1
gene_biotype: protein_coding
description:
  ABC transporter permease; COG4591 ABC-type transport system, involved in lipoprotein release, permease component.


ensembl_gene_id: FCOL_03585
symbol: AEW85557.1
gene_biotype: protein_coding
description:
  COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family.


ensembl_gene_id: FCOL_03590
symbol: AEW85558.1
gene_biotype: protein_coding
description:
  Pentein-type domain-containing protein; COG4874 Uncharacterized protein conserved in bacteria containing a pentein-type domain.


ensembl_gene_id: FCOL_03620
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: FCOL_03640
symbol: AEW85568.1
gene_biotype: protein_coding
description:
  COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: FCOL_03645
symbol: AEW85569.1
gene_biotype: protein_coding
description:
  COG1004 Predicted UDP-glucose 6-dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: FCOL_03650
symbol: AEW85570.1
gene_biotype: protein_coding
description:
  COG1088 dTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: FCOL_03655
symbol: AEW85571.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: FCOL_03725
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: FCOL_03730
symbol: pnp
gene_biotype: protein_coding
description:
  Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: FCOL_03735
symbol: AEW85587.1
gene_biotype: protein_coding
description:
  RpoD family RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: FCOL_03815
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: FCOL_03820
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: FCOL_03835
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: FCOL_03845
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: FCOL_03850
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: FCOL_03855
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: FCOL_03860
symbol: AEW85612.1
gene_biotype: protein_coding
description:
  Peptidoglycan glycosyltransferase FtsI precursor; COG0768 Cell division protein FtsI/penicillin-binding protein 2.


ensembl_gene_id: FCOL_03870
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA m(4)C1402 methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: FCOL_03880
symbol: AEW85616.1
gene_biotype: protein_coding
description:
  Ferric iron uptake transcription regulator, Fur; COG0735 Fe2+/Zn2+ uptake regulation proteins; Belongs to the Fur family.


ensembl_gene_id: FCOL_03885
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: FCOL_03890
symbol: AEW85618.1
gene_biotype: protein_coding
description:
  2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoic acid hydrolase; COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily).


ensembl_gene_id: FCOL_03895
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: FCOL_03915
symbol: AEW85623.1
gene_biotype: protein_coding
description:
  NH(3)-dependent NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.


ensembl_gene_id: FCOL_03920
symbol: AEW85624.1
gene_biotype: protein_coding
description:
  Two-component system response regulatory protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.


ensembl_gene_id: FCOL_03930
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. Belongs to the DnaG primase family.


ensembl_gene_id: FCOL_03945
symbol: AEW85629.1
gene_biotype: protein_coding
description:
  Polyprenyl synthetase; COG0142 Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: FCOL_03955
symbol: AEW85631.1
gene_biotype: protein_coding
description:
  COG0685 5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: FCOL_03960
symbol: AEW85632.1
gene_biotype: protein_coding
description:
  Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.


ensembl_gene_id: FCOL_03965
symbol: AEW85633.1
gene_biotype: protein_coding
description:
  Homocysteine S-methyltransferase; COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain.


ensembl_gene_id: FCOL_04055
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: FCOL_04070
symbol: AEW85648.1
gene_biotype: protein_coding
description:
  Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: FCOL_04080
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: FCOL_04100
symbol: AEW85654.1
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 component subunit beta; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.


ensembl_gene_id: FCOL_04105
symbol: AEW85655.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis.


ensembl_gene_id: FCOL_04110
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: FCOL_04115
symbol: menG
gene_biotype: protein_coding
description:
  Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).


ensembl_gene_id: FCOL_04135
symbol: AEW85661.1
gene_biotype: protein_coding
description:
  Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.


ensembl_gene_id: FCOL_04140
symbol: accD
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: FCOL_04145
symbol: AEW85663.1
gene_biotype: protein_coding
description:
  ABC transporter permease; COG0577 ABC-type antimicrobial peptide transport system, permease component.


ensembl_gene_id: FCOL_04150
symbol: purH
gene_biotype: protein_coding
description:
  Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful).


ensembl_gene_id: FCOL_04180
symbol: AEW85670.1
gene_biotype: protein_coding
description:
  Rod shape-determining protein RodA; COG0772 Bacterial cell division membrane protein; Belongs to the SEDS family.


ensembl_gene_id: FCOL_04200
symbol: AEW85674.1
gene_biotype: protein_coding
description:
  hydroxymethylglutaryl-CoA reductase, degradative; COG1257 Hydroxymethylglutaryl-CoA reductase; Belongs to the HMG-CoA reductase family.


ensembl_gene_id: FCOL_04245
symbol: AEW85683.1
gene_biotype: protein_coding
description:
  Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: FCOL_04255
symbol: surE
gene_biotype: protein_coding
description:
  5'(3')-nucleotidase/polyphosphatase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: FCOL_04390
symbol: coaX
gene_biotype: protein_coding
description:
  Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: FCOL_04420
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: FCOL_04435
symbol: AEW85718.1
gene_biotype: protein_coding
description:
  2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase.


ensembl_gene_id: FCOL_04460
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: FCOL_04465
symbol: clpP
gene_biotype: protein_coding
description:
  Endopeptidase Clp; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: FCOL_04485
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: FCOL_04495
symbol: ppnK
gene_biotype: protein_coding
description:
  Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: FCOL_04505
symbol: AEW85732.1
gene_biotype: protein_coding
description:
  Undecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: FCOL_04550
symbol: AEW85741.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone.


ensembl_gene_id: FCOL_04605
symbol: ctaB
gene_biotype: protein_coding
description:
  Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.


ensembl_gene_id: FCOL_04720
symbol: AEW85775.1
gene_biotype: protein_coding
description:
  Protease DegQ precursor; COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain.


ensembl_gene_id: FCOL_04725
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: FCOL_04735
symbol: mltG
gene_biotype: protein_coding
description:
  Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: FCOL_04750
symbol: AEW85781.2
gene_biotype: protein_coding
description:
  Low molecular weight phosphotyrosine protein phosphatase; COG0394 Protein-tyrosine-phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: FCOL_04755
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: FCOL_04775
symbol: AEW85786.1
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: FCOL_04785
symbol: AEW85788.1
gene_biotype: protein_coding
description:
  N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase; COG2890 Methylase of polypeptide chain release factors.


ensembl_gene_id: FCOL_04800
symbol: xerC
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: FCOL_04815
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: FCOL_04825
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: FCOL_04850
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: FCOL_04920
symbol: AEW85811.1
gene_biotype: protein_coding
description:
  Lipid ABC transporter permease/ATPase; COG1132 ABC-type multidrug transport system, ATPase and permease components.


ensembl_gene_id: FCOL_04945
symbol: AEW85816.1
gene_biotype: protein_coding
description:
  COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains).


ensembl_gene_id: FCOL_05055
symbol: cobS
gene_biotype: protein_coding
description:
  adenosylcobinamide-GDP ribazoletransferase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: FCOL_05060
symbol: AEW85839.1
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: FCOL_05070
symbol: AEW85841.1
gene_biotype: protein_coding
description:
  Cobalbumin biosynthesis enzyme; COG2087 Adenosyl cobinamide kinase/adenosyl cobinamide phosphate guanylyltransferase.


ensembl_gene_id: FCOL_05085
symbol: AEW85844.1
gene_biotype: protein_coding
description:
  Iron ABC transporter permease; COG0609 ABC-type Fe3+-siderophore transport system, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: FCOL_05090
symbol: AEW85845.1
gene_biotype: protein_coding
description:
  ABC transporter-like protein; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.


ensembl_gene_id: FCOL_05100
symbol: AEW85847.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase; COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: FCOL_05155
symbol: AEW85858.2
gene_biotype: protein_coding
description:
  Inward rectifier potassium channel Irk; COG1226 Kef-type K+ transport systems, predicted NAD-binding component.


ensembl_gene_id: FCOL_05160
symbol: nhaA
gene_biotype: protein_coding
description:
  Na+/H+ antiporter NhaA; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.


ensembl_gene_id: FCOL_05210
symbol: AEW85867.1
gene_biotype: protein_coding
description:
  COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).


ensembl_gene_id: FCOL_05305
symbol: AEW85886.1
gene_biotype: protein_coding
description:
  Co-activator of prophage gene expression IbrA; COG3969 Predicted phosphoadenosine phosphosulfate sulfotransferase.


ensembl_gene_id: FCOL_05315
symbol: AEW85888.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase.


ensembl_gene_id: FCOL_05475
symbol: AEW85920.1
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: FCOL_05485
symbol: AEW85922.1
gene_biotype: protein_coding
description:
  LuxR family transcriptional regulator protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.


ensembl_gene_id: FCOL_05550
symbol: AEW85935.1
gene_biotype: protein_coding
description:
  Transcription activator effector binding protein; COG3708 Uncharacterized protein conserved in bacteria.


ensembl_gene_id: FCOL_05625
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: FCOL_05680
symbol: msrA-2
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase msrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: FCOL_05695
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase subunit beta; COG0073 EMAP domain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: FCOL_05705
symbol: AEW85966.1
gene_biotype: protein_coding
description:
  Fumarylacetoacetase; COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).


ensembl_gene_id: FCOL_05710
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: FCOL_05715
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: FCOL_05720
symbol: AEW85969.1
gene_biotype: protein_coding
description:
  Proton glutamate symport protein GltP; COG1301 Na+/H+-dicarboxylate symporters; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: FCOL_05740
symbol: AEW85973.1
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase like protein, AhpD family; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: FCOL_05750
symbol: AEW85975.1
gene_biotype: protein_coding
description:
  Putative Crp/Fnr family transcriptional regulator; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.


ensembl_gene_id: FCOL_05760
symbol: AEW85977.1
gene_biotype: protein_coding
description:
  Glyoxalase/bleomycin resistance protein/dioxygenase; COG0346 Lactoylglutathione lyase and related lyases.


ensembl_gene_id: FCOL_05765
symbol: katG
gene_biotype: protein_coding
description:
  Catalase/hydroperoxidase HPI(I); Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.


ensembl_gene_id: FCOL_05770
symbol: AEW85979.1
gene_biotype: protein_coding
description:
  Pyruvate/branched-chain alpha-keto acid dehydrogenase (E1) component, alpha and beta subunits; COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit.


ensembl_gene_id: FCOL_05815
symbol: AEW85988.1
gene_biotype: protein_coding
description:
  Rhodanese domain protein; COG0526 Thiol-disulfide isomerase and thioredoxins; Belongs to the thioredoxin family.


ensembl_gene_id: FCOL_05870
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA-specific 2-thiouridylase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: FCOL_05885
symbol: cobB
gene_biotype: protein_coding
description:
  Silent information regulator protein Sir2; COG0846 NAD-dependent protein deacetylases, SIR2 family; Belongs to the sirtuin family. Class III subfamily.


ensembl_gene_id: FCOL_05890
symbol: trmH
gene_biotype: protein_coding
description:
  Putative tRNA/rRNA methyltransferase; Catalyzes the 2'-O methylation of guanosine at position 18 in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: FCOL_05930
symbol: icmF
gene_biotype: protein_coding
description:
  methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.


ensembl_gene_id: FCOL_05995
symbol: folD
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: FCOL_06000
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: FCOL_06010
symbol: AEW86027.1
gene_biotype: protein_coding
description:
  TonB-dependent outer membrane hemin receptor precursor PhuR; COG1629 Outer membrane receptor proteins, mostly Fe transport.


ensembl_gene_id: FCOL_06030
symbol: AEW86031.1
gene_biotype: protein_coding
description:
  Putative deoxyribonucleoside-triphosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: FCOL_06115
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: FCOL_06125
symbol: AEW86046.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, crp/fnr family protein; COG0664 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases.


ensembl_gene_id: FCOL_06150
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: FCOL_06160
symbol: AEW86053.1
gene_biotype: protein_coding
description:
  Holliday junction resolvase-like protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: FCOL_06165
symbol: dapD
gene_biotype: protein_coding
description:
  COG2171 Tetrahydrodipicolinate N-succinyltransferase; Belongs to the transferase hexapeptide repeat family.


ensembl_gene_id: FCOL_06205
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: FCOL_06215
symbol: AEW86064.1
gene_biotype: protein_coding
description:
  ABC transporter ATPase; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components.


ensembl_gene_id: FCOL_06220
symbol: AEW86065.1
gene_biotype: protein_coding
description:
  Putative AraC family transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.


ensembl_gene_id: FCOL_06230
symbol: AEW86067.1
gene_biotype: protein_coding
description:
  OmpA/MotB domain protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.


ensembl_gene_id: FCOL_06325
symbol: AEW86086.1
gene_biotype: protein_coding
description:
  Multidrug resistance protein norM (Na(+)/drug antiporter); COG0534 Na+-driven multidrug efflux pump.


ensembl_gene_id: FCOL_06330
symbol: AEW86087.1
gene_biotype: protein_coding
description:
  Von Willebrand factor, type A; COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.


ensembl_gene_id: FCOL_06340
symbol: AEW86089.1
gene_biotype: protein_coding
description:
  Putative translation initiation protein; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.


ensembl_gene_id: FCOL_06365
symbol: AEW86094.2
gene_biotype: protein_coding
description:
  Two-component system response regulatory protein; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.


ensembl_gene_id: FCOL_06395
symbol: trmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: FCOL_06430
symbol: AEW86107.1
gene_biotype: protein_coding
description:
  Periplasmic binding protein; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.


ensembl_gene_id: FCOL_06435
symbol: pyrF
gene_biotype: protein_coding
description:
  COG0284 Orotidine-5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily.


ensembl_gene_id: FCOL_06450
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: FCOL_06470
symbol: AEW86115.1
gene_biotype: protein_coding
description:
  Glu/Leu/Phe/Val dehydrogenase family protein; COG0334 Glutamate dehydrogenase/leucine dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: FCOL_06480
symbol: anmK
gene_biotype: protein_coding
description:
  anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.


ensembl_gene_id: FCOL_06525
symbol: AEW86126.1
gene_biotype: protein_coding
description:
  COG3278 Cbb3-type cytochrome oxidase, subunit 1; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: FCOL_06530
symbol: AEW86127.1
gene_biotype: protein_coding
description:
  Cytochrome cbb3 oxidase maturation protein CcoS; COG3197 Uncharacterized protein, possibly involved in nitrogen fixation.


ensembl_gene_id: FCOL_06550
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.


ensembl_gene_id: FCOL_06635
symbol: lolD
gene_biotype: protein_coding
description:
  ABC transporter ATPase; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.


ensembl_gene_id: FCOL_06665
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: FCOL_06675
symbol: tsaD
gene_biotype: protein_coding
description:
  UGMP family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: FCOL_06680
symbol: AEW86157.1
gene_biotype: protein_coding
description:
  16S ribosomal RNA methyltransferase RsmE; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: FCOL_06730
symbol: AEW86167.1
gene_biotype: protein_coding
description:
  Arginase/agmatinase/formiminoglutamase; COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family.


ensembl_gene_id: FCOL_06765
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium/cobalt transporter CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: FCOL_06790
symbol: AEW86179.1
gene_biotype: protein_coding
description:
  UBA/THIF-type NAD/FAD binding protein; COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1.


ensembl_gene_id: FCOL_06815
symbol: AEW86184.1
gene_biotype: protein_coding
description:
  COG4219 Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component.


ensembl_gene_id: FCOL_06825
symbol: secF
gene_biotype: protein_coding
description:
  Bifunctional preprotein translocase subunit SecD/SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.


ensembl_gene_id: FCOL_06830
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.


ensembl_gene_id: FCOL_06835
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: FCOL_06845
symbol: AEW86190.1
gene_biotype: protein_coding
description:
  NUDIX hydrolase; COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); Belongs to the Nudix hydrolase family.


ensembl_gene_id: FCOL_06850
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: FCOL_06860
symbol: AEW86193.1
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase domain-containing protein; COG0513 Superfamily II DNA and RNA helicases; Belongs to the DEAD box helicase family.


ensembl_gene_id: FCOL_06880
symbol: lolD-2
gene_biotype: protein_coding
description:
  Phosphonate-transporting ATPase; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.


ensembl_gene_id: FCOL_06885
symbol: AEW86198.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG4591 ABC-type transport system, involved in lipoprotein release, permease component.


ensembl_gene_id: FCOL_06900
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: FCOL_06905
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanyl-alanine synthetase A; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: FCOL_06915
symbol: AEW86204.1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: FCOL_06945
symbol: murQ
gene_biotype: protein_coding
description:
  N-acetylmuramic acid-6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.


ensembl_gene_id: FCOL_07050
symbol: AEW86229.1
gene_biotype: protein_coding
description:
  Two-component system response regulatory protein RprY; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.


ensembl_gene_id: FCOL_07060
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: FCOL_07075
symbol: fabV
gene_biotype: protein_coding
description:
  trans-2-enoyl-CoA reductase; Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon- carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP); Belongs to the TER reductase family.


ensembl_gene_id: FCOL_07090
symbol: AEW86237.1
gene_biotype: protein_coding
description:
  Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase CoaBC; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: FCOL_07105
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: FCOL_07120
symbol: AEW86243.1
gene_biotype: protein_coding
description:
  COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases; Belongs to the 5'-nucleotidase family.


ensembl_gene_id: FCOL_07150
symbol: AEW86249.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component.


ensembl_gene_id: FCOL_07215
symbol: AEW86262.1
gene_biotype: protein_coding
description:
  Ornithine--oxo-acid transaminase; COG4992 Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: FCOL_07260
symbol: AEW86271.1
gene_biotype: protein_coding
description:
  COG2265 SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: FCOL_07275
symbol: AEW86274.1
gene_biotype: protein_coding
description:
  Nucleic acid-binding domain-containing protein; COG2996 Uncharacterized protein conserved in bacteria; Belongs to the CvfB family.


ensembl_gene_id: FCOL_07285
symbol: menD
gene_biotype: protein_coding
description:
  2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily.


ensembl_gene_id: FCOL_07320
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: FCOL_07355
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).


ensembl_gene_id: FCOL_07370
symbol: rimO
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: FCOL_07390
symbol: AEW86297.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG5512 Zn-ribbon-containing, possibly RNA-binding protein and truncated derivatives.


ensembl_gene_id: FCOL_07435
symbol: AEW86306.1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).


ensembl_gene_id: FCOL_07445
symbol: AEW86308.1
gene_biotype: protein_coding
description:
  Putative penicillin-binding protein; COG1680 Beta-lactamase class C and other penicillin binding proteins.


ensembl_gene_id: FCOL_07485
symbol: AEW86316.1
gene_biotype: protein_coding
description:
  Maf-like protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: FCOL_07495
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: FCOL_07500
symbol: AEW86319.1
gene_biotype: protein_coding
description:
  ABC transporter permease/ATPase; COG1132 ABC-type multidrug transport system, ATPase and permease components.


ensembl_gene_id: FCOL_07515
symbol: AEW86322.1
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: FCOL_07535
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: FCOL_07565
symbol: AEW86332.1
gene_biotype: protein_coding
description:
  Cytosine-specific methyltransferase; COG0270 Site-specific DNA methylase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.


ensembl_gene_id: FCOL_07600
symbol: AEW86339.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG1107 Archaea-specific RecJ-like exonuclease, contains DnaJ-type Zn finger domain.


ensembl_gene_id: FCOL_07625
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: FCOL_07630
symbol: pcm
gene_biotype: protein_coding
description:
  protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.


ensembl_gene_id: FCOL_07635
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase complex subunit A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: FCOL_07695
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: FCOL_07720
symbol: AEW86363.1
gene_biotype: protein_coding
description:
  DNA topoisomerase IV subunit B; COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit.


ensembl_gene_id: FCOL_07730
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: FCOL_07775
symbol: purC
gene_biotype: protein_coding
description:
  COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; Belongs to the SAICAR synthetase family.


ensembl_gene_id: FCOL_07815
symbol: AEW86380.1
gene_biotype: protein_coding
description:
  Gliding motility protein GldF; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component.


ensembl_gene_id: FCOL_07820
symbol: AEW86381.1
gene_biotype: protein_coding
description:
  Gliding motility protein GldG; COG3225 ABC-type uncharacterized transport system involved in gliding motility, auxiliary component.


ensembl_gene_id: FCOL_07825
symbol: AEW86382.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of  [...]


ensembl_gene_id: FCOL_07870
symbol: AEW86391.1
gene_biotype: protein_coding
description:
  RNA-binding S4 domain-containing protein; COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog).


ensembl_gene_id: FCOL_07885
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: FCOL_07945
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: FCOL_07960
symbol: AEW86409.1
gene_biotype: protein_coding
description:
  ATP-binding Mrp/Nbp35 family protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: FCOL_07990
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: FCOL_08015
symbol: AEW86420.1
gene_biotype: protein_coding
description:
  Metallophosphoesterase; COG0639 Diadenosine tetraphosphatase and related serine/threonine protein phosphatases.


ensembl_gene_id: FCOL_08025
symbol: AEW86422.1
gene_biotype: protein_coding
description:
  PhnA protein; COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism.


ensembl_gene_id: FCOL_08060
symbol: AEW86427.1
gene_biotype: protein_coding
description:
  Two-component system sensor histidine kinase involved in phosphate regulation; COG0642 Signal transduction histidine kinase.


ensembl_gene_id: FCOL_08065
symbol: AEW86428.1
gene_biotype: protein_coding
description:
  Two-component system response regulatory protein involved in phosphate regulation; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.


ensembl_gene_id: FCOL_08100
symbol: AEW86435.1
gene_biotype: protein_coding
description:
  Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: FCOL_08105
symbol: AEW86436.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxyl carrierprotein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: FCOL_08110
symbol: fabH-2
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl carrier protein) synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: FCOL_08125
symbol: AEW86440.1
gene_biotype: protein_coding
description:
  4-hydroxythreonine-4-phosphate dehydrogenase; COG1995 Pyridoxal phosphate biosynthesis protein; Belongs to the PdxA family.


ensembl_gene_id: FCOL_08135
symbol: atpG
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: FCOL_08140
symbol: atpA
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: FCOL_08145
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family.


ensembl_gene_id: FCOL_08150
symbol: atpF
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: FCOL_08155
symbol: atpE
gene_biotype: protein_coding
description:
  H+-transporting two-sector ATPase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: FCOL_08160
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0, A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.


ensembl_gene_id: FCOL_08190
symbol: AEW86453.1
gene_biotype: protein_coding
description:
  Phenylacetic acid degradation NADH oxidoreductase PaaE; COG1018 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1.


ensembl_gene_id: FCOL_08195
symbol: AEW86454.1
gene_biotype: protein_coding
description:
  Heptosyltransferase involved in lipopolysaccharide core biosynthesis; COG0859 ADP-heptose:LPS heptosyltransferase.


ensembl_gene_id: FCOL_08240
symbol: AEW86463.1
gene_biotype: protein_coding
description:
  Putative colanic biosynthesis UDP-glucose lipid carrier transferase; COG2148 Sugar transferases involved in lipopolysaccharide synthesis.


ensembl_gene_id: FCOL_08250
symbol: AEW86465.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.


ensembl_gene_id: FCOL_08255
symbol: AEW86466.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: FCOL_08285
symbol: AEW86472.1
gene_biotype: protein_coding
description:
  Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.


ensembl_gene_id: FCOL_08295
symbol: AEW86474.1
gene_biotype: protein_coding
description:
  M50 family membrane-associated zinc metalloprotease precursor; COG0750 Predicted membrane-associated Zn-dependent proteases 1.


ensembl_gene_id: FCOL_08320
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: FCOL_08330
symbol: AEW86481.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase; Belongs to the UPF0102 family.


ensembl_gene_id: FCOL_08335
symbol: AEW86482.1
gene_biotype: protein_coding
description:
  Carboxypeptidase; COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF.


ensembl_gene_id: FCOL_08345
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: FCOL_08415
symbol: AEW86498.1
gene_biotype: protein_coding
description:
  Capsular polysaccharide biosynthesis protein; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.


ensembl_gene_id: FCOL_08440
symbol: AEW86503.1
gene_biotype: protein_coding
description:
  Putative glycosyl transferase; COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain.


ensembl_gene_id: FCOL_08455
symbol: AEW86506.1
gene_biotype: protein_coding
description:
  3-oxoacid CoA-transferase subunit B family protein AtoA; COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit.


ensembl_gene_id: FCOL_08495
symbol: AEW86514.1
gene_biotype: protein_coding
description:
  Rhodanese domain-containing protein; COG1054 Predicted sulfurtransferase; Belongs to the UPF0176 family.


ensembl_gene_id: FCOL_08550
symbol: AEW86525.1
gene_biotype: protein_coding
description:
  Putative drug/metabolite-transporting permease; COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily.


ensembl_gene_id: FCOL_08575
symbol: AEW86530.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake.


ensembl_gene_id: FCOL_08615
symbol: cas9-2
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Csn1 family; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans- encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this  [...]


ensembl_gene_id: FCOL_08645
symbol: AEW86542.1
gene_biotype: protein_coding
description:
  Peptidase M20; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.


ensembl_gene_id: FCOL_08655
symbol: AEW86544.1
gene_biotype: protein_coding
description:
  COG0078 Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.


ensembl_gene_id: FCOL_08665
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: FCOL_08745
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: FCOL_08775
symbol: AEW86567.1
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: FCOL_08800
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: FCOL_08810
symbol: ybeY
gene_biotype: protein_coding
description:
  Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: FCOL_08815
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: FCOL_08900
symbol: AEW86589.1
gene_biotype: protein_coding
description:
  Membrane-associated phospholipid phosphatase; COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit.


ensembl_gene_id: FCOL_08910
symbol: AEW86591.1
gene_biotype: protein_coding
description:
  Cell division protein FtsX; Required for cell division and gliding motility. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: FCOL_08920
symbol: uppP
gene_biotype: protein_coding
description:
  UDP-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: FCOL_08925
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: FCOL_08945
symbol: thiC
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.


ensembl_gene_id: FCOL_08960
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: FCOL_08965
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole biosynthesis protein ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: FCOL_08975
symbol: AEW86604.1
gene_biotype: protein_coding
description:
  UBA/THIF-type NAD/FAD binding protein; COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2.


ensembl_gene_id: FCOL_09000
symbol: aat
gene_biotype: protein_coding
description:
  leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: FCOL_09010
symbol: AEW86611.1
gene_biotype: protein_coding
description:
  COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.


ensembl_gene_id: FCOL_09025
symbol: mtgA
gene_biotype: protein_coding
description:
  Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.


ensembl_gene_id: FCOL_09030
symbol: AEW86615.1
gene_biotype: protein_coding
description:
  Carboxy-terminal processing protease precursor; COG0793 Periplasmic protease; Belongs to the peptidase S41A family.


ensembl_gene_id: FCOL_09055
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.


ensembl_gene_id: FCOL_09060
symbol: AEW86621.1
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: FCOL_09065
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: FCOL_09080
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: FCOL_09085
symbol: AEW86626.1
gene_biotype: protein_coding
description:
  COG0212 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.


ensembl_gene_id: FCOL_09090
symbol: AEW86627.1
gene_biotype: protein_coding
description:
  Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: FCOL_09095
symbol: AEW86628.1
gene_biotype: protein_coding
description:
  COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); Belongs to the helicase family. UvrD subfamily.


ensembl_gene_id: FCOL_09100
symbol: kbl
gene_biotype: protein_coding
description:
  2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.


ensembl_gene_id: FCOL_09195
symbol: AEW86648.1
gene_biotype: protein_coding
description:
  Peptidase S24/S26A/S26B, conserved region; COG2932 Predicted transcriptional regulator; Belongs to the peptidase S24 family.


ensembl_gene_id: FCOL_09240
symbol: AEW86657.1
gene_biotype: protein_coding
description:
  Peptidase m15b and m15c dd-carboxypeptidase vany/endolysin; COG0505 Carbamoylphosphate synthase small subunit.


ensembl_gene_id: FCOL_09260
symbol: glyQS
gene_biotype: protein_coding
description:
  glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: FCOL_09265
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: FCOL_09330
symbol: AEW86675.1
gene_biotype: protein_coding
description:
  Peptidase dimerization domain-containing protein; COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases.


ensembl_gene_id: FCOL_09345
symbol: mntH
gene_biotype: protein_coding
description:
  Manganese transport protein mntH; H(+)-stimulated, divalent metal cation uptake system. Belongs to the NRAMP family.


ensembl_gene_id: FCOL_09355
symbol: AEW86680.1
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: FCOL_09365
symbol: AEW86682.1
gene_biotype: protein_coding
description:
  Nucleoside recognition domain-containing protein; COG2715 Uncharacterized membrane protein, required for spore maturation in B.subtilis.


ensembl_gene_id: FCOL_09380
symbol: AEW86685.1
gene_biotype: protein_coding
description:
  methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: FCOL_09410
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: FCOL_09420
symbol: hemC
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: FCOL_09425
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: FCOL_09435
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: FCOL_09450
symbol: AEW86699.1
gene_biotype: protein_coding
description:
  3-hydroxybutyryl-CoA dehydratase; COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: FCOL_09495
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: FCOL_09500
symbol: AEW86709.2
gene_biotype: protein_coding
description:
  Multi anti extrusion protein MatE; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.


ensembl_gene_id: FCOL_09525
symbol: ksgA
gene_biotype: protein_coding
description:
  16S ribosomal RNA methyltransferase KsgA/Dim1 family protein; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: FCOL_09580
symbol: AEW86725.1
gene_biotype: protein_coding
description:
  Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: FCOL_09620
symbol: AEW86733.1
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase sdr; COG0300 Short-chain dehydrogenases of various substrate specificities; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: FCOL_09640
symbol: AEW86737.1
gene_biotype: protein_coding
description:
  Multidrug resistance protein precursor AcrB/AcrD/AcrF family protein; COG0841 Cation/multidrug efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: FCOL_09745
symbol: AEW86758.1
gene_biotype: protein_coding
description:
  ATPase; COG0542 ATPases with chaperone activity, ATP-binding subunit; Belongs to the ClpA/ClpB family.


ensembl_gene_id: FCOL_09880
symbol: AEW86785.1
gene_biotype: protein_coding
description:
  Integrase family protein; COG4973 Site-specific recombinase XerC; Belongs to the 'phage' integrase family.


ensembl_gene_id: FCOL_09930
symbol: AEW86795.1
gene_biotype: protein_coding
description:
  Type II and III secretion system protein; COG4796 Type II secretory pathway, component HofQ; Belongs to the bacterial secretin family.


ensembl_gene_id: FCOL_09960
symbol: AEW86801.1
gene_biotype: protein_coding
description:
  COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: FCOL_10005
symbol: AEW86810.1
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: FCOL_10010
symbol: ruvC
gene_biotype: protein_coding
description:
  Holliday junction resolvase; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: FCOL_10020
symbol: AEW86813.1
gene_biotype: protein_coding
description:
  Glycosyl transferase, group 2 family protein; COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.


ensembl_gene_id: FCOL_10035
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: FCOL_10040
symbol: rplY
gene_biotype: protein_coding
description:
  50S ribosomal protein L25/general stress protein Ctc; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: FCOL_10075
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: FCOL_10095
symbol: AEW86828.1
gene_biotype: protein_coding
description:
  Bifunctional riboflavin kinase/FMN adenylyltransferase; COG0196 FAD synthase; Belongs to the ribF family.


ensembl_gene_id: FCOL_10100
symbol: AEW86829.1
gene_biotype: protein_coding
description:
  MIP family channel protein; COG0580 Glycerol uptake facilitator and related permeases (Major Intrinsic Protein Family); Belongs to the MIP/aquaporin (TC 1.A.8) family.


ensembl_gene_id: FCOL_10110
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: FCOL_10120
symbol: recA
gene_biotype: protein_coding
description:
  Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: FCOL_10125
symbol: AEW86834.1
gene_biotype: protein_coding
description:
  Histidine triad (HIT) protein; COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases.


ensembl_gene_id: FCOL_10130
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: FCOL_10150
symbol: AEW86839.1
gene_biotype: protein_coding
description:
  tRNA (adenine-N(6)-)-methyltransferase; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC).


ensembl_gene_id: FCOL_10155
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA-processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: FCOL_10180
symbol: AEW86845.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG1721 Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).


ensembl_gene_id: FCOL_10185
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: FCOL_10215
symbol: tadA
gene_biotype: protein_coding
description:
  Cytosine/adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: FCOL_10220
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: FCOL_10245
symbol: AEW86856.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: FCOL_10290
symbol: rimP
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: FCOL_10295
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription elongation factor NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: FCOL_10300
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: FCOL_10310
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: FCOL_10315
symbol: queG
gene_biotype: protein_coding
description:
  Iron-sulfur cluster binding protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family.


ensembl_gene_id: FCOL_10325
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: FCOL_10335
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: FCOL_10345
symbol: AEW86876.1
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: FCOL_10375
symbol: AEW86882.1
gene_biotype: protein_coding
description:
  DNA-binding response regulator, LuxR family protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.


ensembl_gene_id: FCOL_10385
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: FCOL_10400
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: FCOL_10410
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: FCOL_10415
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: FCOL_10420
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: FCOL_10425
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: FCOL_10430
symbol: nusG
gene_biotype: protein_coding
description:
  Putative transcription antitermination protein; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: FCOL_10435
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: FCOL_10440
symbol: tuf
gene_biotype: protein_coding
description:
  Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: FCOL_10450
symbol: AEW86897.1
gene_biotype: protein_coding
description:
  Integrase/recombinase XerC; COG4974 Site-specific recombinase XerD; Belongs to the 'phage' integrase family.


ensembl_gene_id: FCOL_10510
symbol: lipB
gene_biotype: protein_coding
description:
  Octanoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: FCOL_10680
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: FCOL_10695
symbol: AEW86942.1
gene_biotype: protein_coding
description:
  Mtultidrug ABC transporter permease/ATPase; COG1132 ABC-type multidrug transport system, ATPase and permease components.


ensembl_gene_id: FCOL_10720
symbol: era
gene_biotype: protein_coding
description:
  GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: FCOL_10740
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: FCOL_10815
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: FCOL_10830
symbol: AEW86969.2
gene_biotype: protein_coding
description:
  ABC transporter permease; COG0767 ABC-type transport system involved in resistance to organic solvents, permease component.


ensembl_gene_id: FCOL_10835
symbol: AEW86970.1
gene_biotype: protein_coding
description:
  ABC transporter ATPase; COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component.


ensembl_gene_id: FCOL_10855
symbol: AEW86974.1
gene_biotype: protein_coding
description:
  Short-chain type dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: FCOL_10870
symbol: AEW86977.1
gene_biotype: protein_coding
description:
  COG0508 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes.


ensembl_gene_id: FCOL_10875
symbol: pdhA
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: FCOL_10880
symbol: AEW86979.2
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: FCOL_10900
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: FCOL_10935
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: FCOL_10950
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: FCOL_10955
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: FCOL_10960
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: FCOL_10965
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: FCOL_10975
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: FCOL_10980
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: FCOL_10985
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: FCOL_10995
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: FCOL_11000
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: FCOL_11005
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: FCOL_11010
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: FCOL_11015
symbol: rpsN
gene_biotype: protein_coding
description:
  30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: FCOL_11020
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: FCOL_11025
symbol: rplX
gene_biotype: protein_coding
description:
  50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: FCOL_11030
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: FCOL_11035
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: FCOL_11045
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: FCOL_11050
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: FCOL_11055
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: FCOL_11060
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: FCOL_11065
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: FCOL_11070
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: FCOL_11080
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: FCOL_11085
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: FCOL_11090
symbol: fusA
gene_biotype: protein_coding
description:
  Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: FCOL_11095
symbol: rpsG
gene_biotype: protein_coding
description:
  30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: FCOL_11100
symbol: rpsL
gene_biotype: protein_coding
description:
  30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: FCOL_11120
symbol: AEW87027.1
gene_biotype: protein_coding
description:
  tRNA/rRNA methyltransferase; COG0566 rRNA methylases; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: FCOL_11130
symbol: AEW87029.1
gene_biotype: protein_coding
description:
  Recombination factor protein RarA; COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase.


ensembl_gene_id: FCOL_11155
symbol: AEW87034.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.


ensembl_gene_id: FCOL_11165
symbol: AEW87036.1
gene_biotype: protein_coding
description:
  Phosphonate-transporting ATPase; COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component.


ensembl_gene_id: FCOL_11180
symbol: AEW87039.1
gene_biotype: protein_coding
description:
  PepSY-associated TM helix domain-containing protein; COG3182 Uncharacterized iron-regulated membrane protein.


ensembl_gene_id: FCOL_11190
symbol: AEW87041.1
gene_biotype: protein_coding
description:
  LuxR family two component transcriptional regulator; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.


ensembl_gene_id: FCOL_11195
symbol: AEW87042.1
gene_biotype: protein_coding
description:
  Putative L-2,4-diaminobutyrate decarboxylase; COG0076 Glutamate decarboxylase and related PLP-dependent proteins.


ensembl_gene_id: FCOL_11215
symbol: AEW87046.1
gene_biotype: protein_coding
description:
  Siderophore biosynthetic enzyme; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.


ensembl_gene_id: FCOL_11230
symbol: AEW87049.1
gene_biotype: protein_coding
description:
  Cytoplasmic peptidoglycan synthetase domain-containing protein; COG0773 UDP-N-acetylmuramate-alanine ligase.


ensembl_gene_id: FCOL_11285
symbol: obgE
gene_biotype: protein_coding
description:
  GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: FCOL_11295
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: FCOL_11300
symbol: AEW87063.1
gene_biotype: protein_coding
description:
  COG0634 Hypoxanthine-guanine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: FCOL_11305
symbol: purK
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: FCOL_11320
symbol: purE
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: FCOL_11390
symbol: AEW87081.1
gene_biotype: protein_coding
description:
  COG0403 Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain; Belongs to the GcvP family.


ensembl_gene_id: FCOL_11540
symbol: AEW87109.1
gene_biotype: protein_coding
description:
  D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; Catalyzes the reversible oxidation of 3-phospho-D-glycerate to 3-phosphonooxypyruvate, the first step of the phosphorylated L- serine biosynthesis pathway. Also catalyzes the reversible oxidation of 2-hydroxyglutarate to 2-oxoglutarate; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: FCOL_11635
symbol: AEW87128.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; Belongs to the arginase family.


ensembl_gene_id: FCOL_11640
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: FCOL_11645
symbol: miaB
gene_biotype: protein_coding
description:
  (dimethylallyl)adenosine tRNA methylthiotransferase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: FCOL_11655
symbol: AEW87132.1
gene_biotype: protein_coding
description:
  Sigma-54 dependent transcription regulator; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.


ensembl_gene_id: FCOL_11670
symbol: AEW87135.1
gene_biotype: protein_coding
description:
  Preprotein translocase SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: FCOL_11675
symbol: groS
gene_biotype: protein_coding
description:
  Co-chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: FCOL_11680
symbol: groEL
gene_biotype: protein_coding
description:
  Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: FCOL_11760
symbol: AEW87153.1
gene_biotype: protein_coding
description:
  Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases.


ensembl_gene_id: FCOL_11785
symbol: AEW87158.1
gene_biotype: protein_coding
description:
  COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: FCOL_11790
symbol: AEW87159.1
gene_biotype: protein_coding
description:
  Beta-ketoacyl synthase; COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: FCOL_11835
symbol: AEW87168.1
gene_biotype: protein_coding
description:
  Flexirubin-type pigment biosynthesis acyl carrier protein DarC1; COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases.


ensembl_gene_id: FCOL_11860
symbol: acpP-2
gene_biotype: protein_coding
description:
  Hypothetical protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.


ensembl_gene_id: FCOL_11870
symbol: AEW87175.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).


ensembl_gene_id: FCOL_11895
symbol: AEW87180.1
gene_biotype: protein_coding
description:
  CzcA family heavy metal efflux protein; COG3696 Putative silver efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: FCOL_11925
symbol: AEW87186.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase (quinone); COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit.


ensembl_gene_id: FCOL_11965
symbol: AEW87194.1
gene_biotype: protein_coding
description:
  Two component sigma-54 specific Fis family transcriptional regulator; COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains.


ensembl_gene_id: FCOL_11975
symbol: AEW87196.1
gene_biotype: protein_coding
description:
  ABC transporter, ATP-binding protein; COG4152 ABC-type uncharacterized transport system, ATPase component.


ensembl_gene_id: FCOL_11980
symbol: dnaJ
gene_biotype: protein_coding
description:
  Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]


ensembl_gene_id: FCOL_11985
symbol: grpE
gene_biotype: protein_coding
description:
  Chaperone protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-d [...]


ensembl_gene_id: FCOL_12060
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: FCOL_12080
symbol: AEW87217.1
gene_biotype: protein_coding
description:
  CinA-like protein; COG1058 Predicted nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; Belongs to the CinA family.


ensembl_gene_id: FCOL_12090
symbol: AEW87219.1
gene_biotype: protein_coding
description:
  Fumarylacetoacetate hydrolase; COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).


ensembl_gene_id: FCOL_12115
symbol: AEW87224.1
gene_biotype: protein_coding
description:
  ABC transporter-like protein; COG0488 ATPase components of ABC transporters with duplicated ATPase domains.


ensembl_gene_id: FCOL_12140
symbol: macB
gene_biotype: protein_coding
description:
  ABC transporter ATPase; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP- binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.


ensembl_gene_id: FCOL_12145
symbol: AEW87230.1
gene_biotype: protein_coding
description:
  Peptidase, M16 family protein; COG0612 Predicted Zn-dependent peptidases; Belongs to the peptidase M16 family.


ensembl_gene_id: FCOL_12165
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.


ensembl_gene_id: FCOL_12210
symbol: AEW87243.1
gene_biotype: protein_coding
description:
  Type I phosphodiesterase/nucleotide pyrophosphatase; COG1524 Uncharacterized proteins of the AP superfamily.


ensembl_gene_id: FCOL_12230
symbol: AEW87247.1
gene_biotype: protein_coding
description:
  Chromosome partitioning protein ParB; COG1475 Predicted transcriptional regulators; Belongs to the ParB family.


ensembl_gene_id: FCOL_12270
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: FCOL_12275
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: FCOL_12285
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.


ensembl_gene_id: FCOL_12400
symbol: AEW87279.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG3005 Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit.


ensembl_gene_id: FCOL_12410
symbol: AEW87281.1
gene_biotype: protein_coding
description:
  Gcn5-related n-acetyltransferase; COG0454 Histone acetyltransferase HPA2 and related acetyltransferases.


ensembl_gene_id: FCOL_12425
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: FCOL_12450
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: FCOL_12465
symbol: AEW87292.1
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase, NADP-dependent; COG2838 Monomeric isocitrate dehydrogenase; Belongs to the monomeric-type IDH family.


ensembl_gene_id: FCOL_12475
symbol: AEW87294.1
gene_biotype: protein_coding
description:
  Putative methyltransferase; COG0863 DNA modification methylase; Belongs to the N(4)/N(6)-methyltransferase family.


ensembl_gene_id: FCOL_12510
symbol: AEW87301.1
gene_biotype: protein_coding
description:
  Undecaprenyl-phosphate galactose phosphotransferase; COG2148 Sugar transferases involved in lipopolysaccharide synthesis.


ensembl_gene_id: FCOL_12520
symbol: AEW87303.1
gene_biotype: protein_coding
description:
  Aminotransferase; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: FCOL_12525
symbol: AEW87304.1
gene_biotype: protein_coding
description:
  WbpM protein involved in UDP-D-Qui2NAc biosynthesis (A nucleotide sugar for antigen-O biosynthesis); COG1086 Predicted nucleoside-diphosphate sugar epimerases.


ensembl_gene_id: FCOL_12570
symbol: AEW87311.1
gene_biotype: protein_coding
description:
  ABC-2 type transporter; COG1682 ABC-type polysaccharide/polyol phosphate export systems, permease component.


ensembl_gene_id: FCOL_12575
symbol: AEW87312.1
gene_biotype: protein_coding
description:
  Teichoic-acid-transporting ATPase; COG1134 ABC-type polysaccharide/polyol phosphate transport system, ATPase component.


ensembl_gene_id: FCOL_12585
symbol: AEW87314.1
gene_biotype: protein_coding
description:
  COG0381 UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: FCOL_12620
symbol: AEW87321.1
gene_biotype: protein_coding
description:
  Membrane bound O-acyl transferase MBOAT family protein; COG1696 Predicted membrane protein involved in D-alanine export; Belongs to the membrane-bound acyltransferase family.


ensembl_gene_id: FCOL_12705
symbol: AEW87336.1
gene_biotype: protein_coding
description:
  CDP-alcohol phosphatidyltransferase; COG1183 Phosphatidylserine synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: FCOL_12720
symbol: AEW87339.1
gene_biotype: protein_coding
description:
  TonB-dependent outer membrane ferrichrome-iron receptor precursor FhuA; COG1629 Outer membrane receptor proteins, mostly Fe transport.


ensembl_gene_id: FCOL_12740
symbol: AEW87343.1
gene_biotype: protein_coding
description:
  ApbE family lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: FCOL_12750
symbol: AEW87345.1
gene_biotype: protein_coding
description:
  Carboxymuconolactone decarboxylase family protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: FCOL_12755
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.


ensembl_gene_id: FCOL_12760
symbol: AEW87347.1
gene_biotype: protein_coding
description:
  KpsF/GutQ family protein; COG0794 Predicted sugar phosphate isomerase involved in capsule formation; Belongs to the SIS family. GutQ/KpsF subfamily.


ensembl_gene_id: FCOL_12865
symbol: atpD
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: FCOL_12885
symbol: AEW87372.1
gene_biotype: protein_coding
description:
  ATPase AAA; COG0507 ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member.


ensembl_gene_id: FCOL_12935
symbol: AEW87382.1
gene_biotype: protein_coding
description:
  Putative nicotinate phosphoribosyltransferase; COG1488 Nicotinic acid phosphoribosyltransferase; Belongs to the NAPRTase family.


ensembl_gene_id: FCOL_12955
symbol: kptA
gene_biotype: protein_coding
description:
  Phosphotransferase KptA/Tpt1; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.


ensembl_gene_id: FCOL_12965
symbol: AEW87388.1
gene_biotype: protein_coding
description:
  Hypothetical protein; COG2110 Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1.


ensembl_gene_id: FCOL_12980
symbol: AEW87391.1
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; COG0462 Phosphoribosylpyrophosphate synthetase; Belongs to the ribose-phosphate pyrophosphokinase family.


ensembl_gene_id: FCOL_12990
symbol: AEW87393.1
gene_biotype: protein_coding
description:
  Alcohol dehydrogenase; COG1979 Uncharacterized oxidoreductases, Fe-dependent alcohol dehydrogenase family.


ensembl_gene_id: FCOL_13000
symbol: AEW87395.1
gene_biotype: protein_coding
description:
  COG0240 Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: FCOL_13010
symbol: pheS
gene_biotype: protein_coding
description:
  COG0016 Phenylalanyl-tRNA synthetase alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: FCOL_13025
symbol: AEW87400.1
gene_biotype: protein_coding
description:
  FeS assembly protein SufD; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.


ensembl_gene_id: FCOL_13035
symbol: AEW87402.1
gene_biotype: protein_coding
description:
  Fe-S assembly ATPase, SufC; COG0396 ABC-type transport system involved in Fe-S cluster assembly, ATPase component.


ensembl_gene_id: FCOL_13045
symbol: AEW87404.1
gene_biotype: protein_coding
description:
  Cysteine desulfurase activator complex subunit SufB; COG0719 ABC-type transport system involved in Fe-S cluster assembly, permease component.


ensembl_gene_id: FCOL_13090
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: FCOL_13115
symbol: nbaC
gene_biotype: protein_coding
description:
  3-hydroxyanthranilate 3,4-dioxygenase; Catalyzes the oxidative ring opening of 3-hydroxyanthranilate to 2-amino-3-carboxymuconate semialdehyde, which spontaneously cyclizes to quinolinate; Belongs to the 3-HAO family.


ensembl_gene_id: FCOL_13125
symbol: AEW87420.1
gene_biotype: protein_coding
description:
  Cys/Met metabolism PLP-dependent enzyme; COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.


ensembl_gene_id: FCOL_13170
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.


ensembl_gene_id: FCOL_13180
symbol: lspA
gene_biotype: protein_coding
description:
  Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: FCOL_13200
symbol: AEW87435.1
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl carrier protein) synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: FCOL_13205
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: FCOL_13235
symbol: AEW87442.1
gene_biotype: protein_coding
description:
  BatA protein; COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.


ensembl_gene_id: FCOL_13240
symbol: AEW87443.1
gene_biotype: protein_coding
description:
  BatB protein; COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.


ensembl_gene_id: FCOL_13275
symbol: AEW87450.1
gene_biotype: protein_coding
description:
  Cysteine desulfurase, SufS; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.


ensembl_gene_id: FCOL_13310
symbol: bioD
gene_biotype: protein_coding
description:
  Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: FCOL_13315
symbol: AEW87458.1
gene_biotype: protein_coding
description:
  COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: FCOL_13335
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase IV, damage-inducible protein DinB; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: FCOL_13345
symbol: rlpA
gene_biotype: protein_coding
description:
  Hypothetical protein; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: FCOL_13380
symbol: AEW87471.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family.


ensembl_gene_id: FCOL_13390
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: FCOL_13405
symbol: panD
gene_biotype: protein_coding
description:
  Aspartate alpha-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: FCOL_13410
symbol: panC
gene_biotype: protein_coding
description:
  Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: FCOL_13425
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: FCOL_13440
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: FCOL_13475
symbol: AEW87490.1
gene_biotype: protein_coding
description:
  COG1024 Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: FCOL_13495
symbol: ahcY
gene_biotype: protein_coding
description:
  S-adenosyl-L-homocysteine hydrolase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: FCOL_13505
symbol: AEW87496.1
gene_biotype: protein_coding
description:
  Geranylgeranylglyceryl phosphate synthase-like protein; Prenyltransferase that catalyzes the transfer of the geranylgeranyl moiety of geranylgeranyl diphosphate (GGPP) to the C3 hydroxyl of sn-glycerol-1-phosphate (G1P).


# pathwayInfo

id: CL:1031
description: Mixed, incl. Fatty acid degradation, and Methylmalonyl-CoA mutase
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1031_Mixed,_incl._Fatty_acid_degradation,_and_Methylmalonyl-CoA_mutase


id: CL:1034
description: Benzoate degradation, and acyl-CoA dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1034_Benzoate_degradation,_and_acyl-CoA_dehydrogenase_activity


id: CL:1060
description: Methylmalonyl-CoA mutase, and Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1060_Methylmalonyl-CoA_mutase,_and_Glyoxalase/Bleomycin_resistance_protein/Dioxygenase_superfamily


id: CL:1077
description: Mixed, incl. Oxidative phosphorylation, and Peptidase M16, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1077_Mixed,_incl._Oxidative_phosphorylation,_and_Peptidase_M16,_C-terminal


id: CL:1078
description: NADH dehydrogenase (quinone) activity, and Peptidase M16, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1078_NADH_dehydrogenase_(quinone)_activity,_and_Peptidase_M16,_C-terminal


id: CL:1082
description: NADH dehydrogenase (quinone) activity, and NADH dehydrogenase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1082_NADH_dehydrogenase_(quinone)_activity,_and_NADH_dehydrogenase_complex


id: CL:1086
description: Quinone, and ATP synthesis coupled electron transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1086_Quinone,_and_ATP_synthesis_coupled_electron_transport


id: CL:1087
description: Quinone, and NADH dehydrogenase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1087_Quinone,_and_NADH_dehydrogenase_complex


id: CL:1100
description: ATP synthesis coupled electron transport, and Quinone
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1100_ATP_synthesis_coupled_electron_transport,_and_Quinone


id: CL:1125
description: Mixed, incl. Cytochrome-c oxidase activity, and Anaerobic respiration
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1125_Mixed,_incl._Cytochrome-c_oxidase_activity,_and_Anaerobic_respiration


id: CL:1126
description: Cytochrome-c oxidase activity, and Heme biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1126_Cytochrome-c_oxidase_activity,_and_Heme_biosynthesis


id: CL:1147
description: Mixed, incl. Anaerobic respiration, and Cytochrome c
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1147_Mixed,_incl._Anaerobic_respiration,_and_Cytochrome_c


id: CL:115
description: Mixed, incl. Protein transport by the Sec complex, and Small ribosomal subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:115_Mixed,_incl._Protein_transport_by_the_Sec_complex,_and_Small_ribosomal_subunit


id: CL:1158
description: Mixed, incl. Ribonucleoside-diphosphate reductase activity, and HD/PDEase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1158_Mixed,_incl._Ribonucleoside-diphosphate_reductase_activity,_and_HD/PDEase_domain


id: CL:1160
description: Mixed, incl. Ribonucleoside-diphosphate reductase complex, and HD/PDEase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1160_Mixed,_incl._Ribonucleoside-diphosphate_reductase_complex,_and_HD/PDEase_domain


id: CL:1177
description: Mixed, incl. Serine aminopeptidase, S33, and Pseudouridine synthase, RsuA/RluB/E/F
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1177_Mixed,_incl._Serine_aminopeptidase,_S33,_and_Pseudouridine_synthase,_RsuA/RluB/E/F


id: CL:1191
description: Mixed, incl. Oxidoreductase activity, acting on a sulfur group of donors, and Thioredoxin-like fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1191_Mixed,_incl._Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_and_Thioredoxin-like_fold


id: CL:1192
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1192_Mixed,_incl._Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor,_and_Thioredoxin-like_fold

description:
  Mixed, incl. Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor, and Thioredoxin-like fold


id: CL:1193
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1193_Mixed,_incl._Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor,_and_Thioredoxin-like_fold

description:
  Mixed, incl. Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor, and Thioredoxin-like fold


id: CL:1195
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor, and Redoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1195_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor,_and_Redoxin


id: CL:1214
description: Mixed, incl. NAD metabolic process, and Aldehyde catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1214_Mixed,_incl._NAD_metabolic_process,_and_Aldehyde_catabolic_process


id: CL:1223
description: Oxidoreductase activity, acting on a sulfur group of donors, and Thioredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1223_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_and_Thioredoxin


id: CL:1225
description: Thioredoxin, and Pyridine nucleotide-disulphide oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1225_Thioredoxin,_and_Pyridine_nucleotide-disulphide_oxidoreductase


id: CL:124
description: Large ribosomal subunit, and rRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:124_Large_ribosomal_subunit,_and_rRNA-binding


id: CL:1244
description: Mixed, incl. SCO1/SenC, and Peptidase family M13
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1244_Mixed,_incl._SCO1/SenC,_and_Peptidase_family_M13


id: CL:1245
description: Mixed, incl. SCO1/SenC, and Peptidase family M13
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1245_Mixed,_incl._SCO1/SenC,_and_Peptidase_family_M13


id: CL:125
description: Large ribosomal subunit, and KOW (Kyprides, Ouzounis, Woese) motif.
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:125_Large_ribosomal_subunit,_and_KOW_(Kyprides,_Ouzounis,_Woese)_motif.


id: CL:1254
description: Mixed, incl. Glycoside-hydrolase family GH114, and RNA methyltransferase TrmH family
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1254_Mixed,_incl._Glycoside-hydrolase_family_GH114,_and_RNA_methyltransferase_TrmH_family


id: CL:1263
description: Mixed, incl. Glycerophospholipid metabolism, and Aquaporin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1263_Mixed,_incl._Glycerophospholipid_metabolism,_and_Aquaporin-like


id: CL:1264
description: Glycerophospholipid metabolism, and Aquaporin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1264_Glycerophospholipid_metabolism,_and_Aquaporin-like


id: CL:1265
description: Glycerophospholipid metabolism, and Manganese/iron superoxide dismutase
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1265_Glycerophospholipid_metabolism,_and_Manganese/iron_superoxide_dismutase


id: CL:1266
description: Mixed, incl. Glycerolipid metabolic process, and Manganese/iron superoxide dismutase
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1266_Mixed,_incl._Glycerolipid_metabolic_process,_and_Manganese/iron_superoxide_dismutase


id: CL:1285
description: Aquaporin-like, and Alditol phosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1285_Aquaporin-like,_and_Alditol_phosphate_metabolic_process


id: CL:1295
description: Mixed, incl. Ferrous iron transporter FeoA domain, and Metal ion transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1295_Mixed,_incl._Ferrous_iron_transporter_FeoA_domain,_and_Metal_ion_transmembrane_transporter_activity


id: CL:1297
description: Mixed, incl. CoA-binding, and Nucleoside recognition
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1297_Mixed,_incl._CoA-binding,_and_Nucleoside_recognition


id: CL:1313
description: Mixed, incl. Chromosome partition, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1313_Mixed,_incl._Chromosome_partition,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:1333
description: Mixed, incl. Fatty acid biosynthetic process, and Formate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1333_Mixed,_incl._Fatty_acid_biosynthetic_process,_and_Formate_metabolic_process


id: CL:1334
description: Mixed, incl. Fatty acid biosynthetic process, and KR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1334_Mixed,_incl._Fatty_acid_biosynthetic_process,_and_KR_domain


id: CL:1335
description: Mixed, incl. Fatty acid biosynthetic process, and KR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1335_Mixed,_incl._Fatty_acid_biosynthetic_process,_and_KR_domain


id: CL:1336
description: Mixed, incl. Fatty acid biosynthetic process, and KR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1336_Mixed,_incl._Fatty_acid_biosynthetic_process,_and_KR_domain


id: CL:1341
description: Mixed, incl. HotDog domain superfamily, and Phosphopantetheine
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1341_Mixed,_incl._HotDog_domain_superfamily,_and_Phosphopantetheine


id: CL:1342
description: Mixed, incl. HotDog domain superfamily, and Phosphopantetheine
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1342_Mixed,_incl._HotDog_domain_superfamily,_and_Phosphopantetheine


id: CL:1344
description: Mixed, incl. Phosphopantetheine, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1344_Mixed,_incl._Phosphopantetheine,_and_ABC-2_transporter


id: CL:1345
description: Mixed, incl. ABC-2 transporter, and Flavoprotein-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1345_Mixed,_incl._ABC-2_transporter,_and_Flavoprotein-like_superfamily


id: CL:1356
description: Phosphopantetheine, and Bacterial lipid A biosynthesis acyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1356_Phosphopantetheine,_and_Bacterial_lipid_A_biosynthesis_acyltransferase


id: CL:136
description: Large ribosomal subunit, and tRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:136_Large_ribosomal_subunit,_and_tRNA-binding


id: CL:1373
description: Mixed, incl. MMPL family, and FAD binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1373_Mixed,_incl._MMPL_family,_and_FAD_binding_domain


id: CL:1389
description: Beta-ketoacyl synthase, C-terminal, and Beta-ketoacyl-acyl-carrier-protein synthase III activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1389_Beta-ketoacyl_synthase,_C-terminal,_and_Beta-ketoacyl-acyl-carrier-protein_synthase_III_activity


id: CL:1407
description: acetyl-CoA carboxylase complex, and Biotin
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1407_acetyl-CoA_carboxylase_complex,_and_Biotin


id: CL:1423
description: Mixed, incl. Protein lipoylation, and Nitronate monooxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1423_Mixed,_incl._Protein_lipoylation,_and_Nitronate_monooxygenase


id: CL:1435
description: Mixed, incl. NodB homology domain, and Armadillo-type fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1435_Mixed,_incl._NodB_homology_domain,_and_Armadillo-type_fold


id: CL:1449
description: Formate metabolic process, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1449_Formate_metabolic_process,_and_Periplasmic_binding_protein


id: CL:1468
description: Mixed, incl. Serine-type endopeptidase activity, and TAT protein transport complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1468_Mixed,_incl._Serine-type_endopeptidase_activity,_and_TAT_protein_transport_complex


id: CL:1469
description: Mixed, incl. Peptidase S1C, and Sulfite exporter TauE/SafE
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1469_Mixed,_incl._Peptidase_S1C,_and_Sulfite_exporter_TauE/SafE


id: CL:1471
description: Mixed, incl. Esterase-like, and Peptidase S1C
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1471_Mixed,_incl._Esterase-like,_and_Peptidase_S1C


id: CL:1495
description: TAT protein transport complex, and 5-formyltetrahydrofolate cyclo-ligase-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1495_TAT_protein_transport_complex,_and_5-formyltetrahydrofolate_cyclo-ligase-like_domain_superfamily


id: CL:1510
description: Mixed, incl. Glutathione metabolism, and Mtb iron assimilation by chelation
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1510_Mixed,_incl._Glutathione_metabolism,_and_Mtb_iron_assimilation_by_chelation


id: CL:1512
description: Mtb iron assimilation by chelation, and tRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1512_Mtb_iron_assimilation_by_chelation,_and_tRNA_pseudouridine_synthesis


id: CL:154
description: Small ribosomal subunit, and Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:154_Small_ribosomal_subunit,_and_Structural_constituent_of_ribosome


id: CL:1546
description: Mostly uncharacterized, incl. ParB/Sulfiredoxin, and Signal peptide processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1546_Mostly_uncharacterized,_incl._ParB/Sulfiredoxin,_and_Signal_peptide_processing


id: CL:1548
description: Mixed, incl. ParB/Sulfiredoxin, and Signal peptide processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1548_Mixed,_incl._ParB/Sulfiredoxin,_and_Signal_peptide_processing


id: CL:1560
description: Mixed, incl. Protein of unknown function DUF4280, and Porin activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1560_Mixed,_incl._Protein_of_unknown_function_DUF4280,_and_Porin_activity


id: CL:1569
description: Mixed, incl. Asparaginase activity, and Phosphate acyltransferases
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1569_Mixed,_incl._Asparaginase_activity,_and_Phosphate_acyltransferases


id: CL:1571
description: Mixed, incl. Asparaginase activity, and Phage integrase SAM-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1571_Mixed,_incl._Asparaginase_activity,_and_Phage_integrase_SAM-like_domain


id: CL:1590
description: Mixed, incl. Signaling, and Cytoskeletal motor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1590_Mixed,_incl._Signaling,_and_Cytoskeletal_motor_activity


id: CL:1592
description: Mixed, incl. Signaling, and Cytoskeletal motor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1592_Mixed,_incl._Signaling,_and_Cytoskeletal_motor_activity


id: CL:1593
description: Mixed, incl. Signaling, and Cytoskeletal motor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1593_Mixed,_incl._Signaling,_and_Cytoskeletal_motor_activity


id: CL:1594
description: Mixed, incl. Signaling, and Cytoskeletal motor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1594_Mixed,_incl._Signaling,_and_Cytoskeletal_motor_activity


id: CL:1595
description: Mixed, incl. Signaling, and Cytoskeletal motor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1595_Mixed,_incl._Signaling,_and_Cytoskeletal_motor_activity


id: CL:1596
description: Mixed, incl. Signaling, and Helix_turn_helix, Lux Regulon
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1596_Mixed,_incl._Signaling,_and_Helix_turn_helix,_Lux_Regulon


id: CL:1597
description: Histidine kinase domain, and Signal transduction response regulator, C-terminal effector
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1597_Histidine_kinase_domain,_and_Signal_transduction_response_regulator,_C-terminal_effector


id: CL:1598
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1598_Signal_transduction_histidine_kinase-related_protein,_C-terminal,_and_OmpR/PhoB-type_DNA-binding_domain

description:
  Signal transduction histidine kinase-related protein, C-terminal, and OmpR/PhoB-type DNA-binding domain


id: CL:1601
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1601_Signal_transduction_histidine_kinase-related_protein,_C-terminal,_and_OmpR/PhoB-type_DNA-binding_domain

description:
  Signal transduction histidine kinase-related protein, C-terminal, and OmpR/PhoB-type DNA-binding domain


id: CL:1605
description: Signal transduction histidine kinase-related protein, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1605_Signal_transduction_histidine_kinase-related_protein,_C-terminal


id: CL:1633
description: Helix_turn_helix, Lux Regulon, and Protein dimerization activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1633_Helix_turn_helix,_Lux_Regulon,_and_Protein_dimerization_activity


id: CL:1644
description: Mixed, incl. Intracellular signal transduction, and Regulation of growth
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1644_Mixed,_incl._Intracellular_signal_transduction,_and_Regulation_of_growth


id: CL:1647
description: Mixed, incl. Regulation of growth, and Glycoside hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1647_Mixed,_incl._Regulation_of_growth,_and_Glycoside_hydrolase_superfamily


id: CL:1662
description: Protein histidine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1662_Protein_histidine_kinase_activity


id: CL:1679
description: Cytoskeletal motor activity, and Sequence-specific DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1679_Cytoskeletal_motor_activity,_and_Sequence-specific_DNA_binding


id: CL:1680
description: Cytoskeletal motor activity, and Sequence-specific DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1680_Cytoskeletal_motor_activity,_and_Sequence-specific_DNA_binding


id: CL:169
description: Large ribosomal subunit rRNA binding, and Repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:169_Large_ribosomal_subunit_rRNA_binding,_and_Repressor


id: CL:1695
description: Cytoskeletal motor activity, and Cro/C1-type helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1695_Cytoskeletal_motor_activity,_and_Cro/C1-type_helix-turn-helix_domain


id: CL:1704
description: Mixed, incl. OmpA family, and Lytic endotransglycosylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1704_Mixed,_incl._OmpA_family,_and_Lytic_endotransglycosylase_activity


id: CL:1726
description: Mixed, incl. 23S rRNA-intervening sequence protein, and Horizontal gene transfer
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1726_Mixed,_incl._23S_rRNA-intervening_sequence_protein,_and_Horizontal_gene_transfer


id: CL:1728
description: Mixed, incl. Horizontal gene transfer, and Subunit ChlI of Mg-chelatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1728_Mixed,_incl._Horizontal_gene_transfer,_and_Subunit_ChlI_of_Mg-chelatase


id: CL:1746
description: 23S rRNA-intervening sequence protein, and Exoribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1746_23S_rRNA-intervening_sequence_protein,_and_Exoribonuclease_activity


id: CL:1757
description: Mixed, incl. Nucleoside salvage, and Ppx/GppA phosphatase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1757_Mixed,_incl._Nucleoside_salvage,_and_Ppx/GppA_phosphatase_family


id: CL:1779
description: Mixed, incl. Sulphur transport, and Methyltransferase type 11
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1779_Mixed,_incl._Sulphur_transport,_and_Methyltransferase_type_11


id: CL:1809
description: Mixed, incl. Intrinsic component of membrane, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1809_Mixed,_incl._Intrinsic_component_of_membrane,_and_Signal


id: CL:1810
description: Mixed, incl. Intrinsic component of membrane, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1810_Mixed,_incl._Intrinsic_component_of_membrane,_and_Coiled_coil


id: CL:1812
description: Mixed, incl. Intrinsic component of membrane, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1812_Mixed,_incl._Intrinsic_component_of_membrane,_and_Tetratricopeptide_repeat


id: CL:1814
description: Mixed, incl. Signal, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1814_Mixed,_incl._Signal,_and_Coiled_coil


id: CL:1815
description: Mixed, incl. Signal, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1815_Mixed,_incl._Signal,_and_Coiled_coil


id: CL:1816
description: Mostly uncharacterized, incl. Tetratricopeptide-like helical domain superfamily, and Outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1816_Mostly_uncharacterized,_incl._Tetratricopeptide-like_helical_domain_superfamily,_and_Outer_membrane


id: CL:1817
description: Mixed, incl. Outer membrane, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1817_Mixed,_incl._Outer_membrane,_and_Coiled_coil


id: CL:1819
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1819_Mostly_uncharacterized,_incl._Cell_outer_membrane,_and_Tetratricopeptide-like_helical_domain_superfamily

description:
  Mostly uncharacterized, incl. Cell outer membrane, and Tetratricopeptide-like helical domain superfamily


id: CL:1821
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1821_Mostly_uncharacterized,_incl._Cell_outer_membrane,_and_Tetratricopeptide-like_helical_domain_superfamily

description:
  Mostly uncharacterized, incl. Cell outer membrane, and Tetratricopeptide-like helical domain superfamily


id: CL:1823
description: Mixed, incl. Tetratricopeptide-like helical domain superfamily, and Cell outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1823_Mixed,_incl._Tetratricopeptide-like_helical_domain_superfamily,_and_Cell_outer_membrane


id: CL:1824
description: Mixed, incl. Tetratricopeptide-like helical domain superfamily, and Cell outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1824_Mixed,_incl._Tetratricopeptide-like_helical_domain_superfamily,_and_Cell_outer_membrane


id: CL:1825
description: Mixed, incl. Cell outer membrane, and Tetratricopeptide repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1825_Mixed,_incl._Cell_outer_membrane,_and_Tetratricopeptide_repeats


id: CL:1826
description: Mostly uncharacterized, incl. Thioredoxin-like, and Bacterial surface antigen (D15)
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1826_Mostly_uncharacterized,_incl._Thioredoxin-like,_and_Bacterial_surface_antigen_(D15)


id: CL:1829
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1829_Mostly_uncharacterized,_incl._Bacterial_surface_antigen_(D15),_and_Domain_of_unknown_function_DUF4369

description:
  Mostly uncharacterized, incl. Bacterial surface antigen (D15), and Domain of unknown function DUF4369


id: CL:1831
description: Mixed, incl. Domain of unknown function DUF4369, and Protein processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1831_Mixed,_incl._Domain_of_unknown_function_DUF4369,_and_Protein_processing


id: CL:1846
description: Mixed, incl. Lipoprotein, and Regulation of RNA biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1846_Mixed,_incl._Lipoprotein,_and_Regulation_of_RNA_biosynthetic_process


id: CL:1871
description: Mixed, incl. Tetratricopeptide repeats, and Response to organic substance
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1871_Mixed,_incl._Tetratricopeptide_repeats,_and_Response_to_organic_substance


id: CL:1883
description: Mixed, incl. Regulation of growth, and GldM C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1883_Mixed,_incl._Regulation_of_growth,_and_GldM_C-terminal_domain


id: CL:189
description: L28p-like, and Zinc-binding ribosomal protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:189_L28p-like,_and_Zinc-binding_ribosomal_protein


id: CL:1895
description: Mixed, incl. Steroid metabolic process, and Regulation of DNA recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1895_Mixed,_incl._Steroid_metabolic_process,_and_Regulation_of_DNA_recombination


id: CL:1912
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1912_Mixed,_incl._Sporulation-like_domain_superfamily,_and_Type_IX_secretion_system_membrane_protein_PorP/SprF

description:
  Mixed, incl. Sporulation-like domain superfamily, and Type IX secretion system membrane protein PorP/SprF


id: CL:1933
description: Mixed, incl. LysE type translocator, and Single-stranded RNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1933_Mixed,_incl._LysE_type_translocator,_and_Single-stranded_RNA_binding


id: CL:1947
description: Mixed, incl. PD-(D/E)XK endonuclease-like domain superfamily, and TRAM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1947_Mixed,_incl._PD-(D/E)XK_endonuclease-like_domain_superfamily,_and_TRAM_domain


id: CL:1962
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1962_Mostly_uncharacterized,_incl._Gliding_motility-associated,_C-terminal_domain,_and_WD40-like_beta_propeller

description:
  Mostly uncharacterized, incl. Gliding motility-associated, C-terminal domain, and WD40-like beta propeller


id: CL:1963
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1963_Mostly_uncharacterized,_incl._C-type_lectin_fold,_and_Gliding_motility-associated,_C-terminal_domain

description:
  Mostly uncharacterized, incl. C-type lectin fold, and Gliding motility-associated, C-terminal domain


id: CL:1964
description: Mostly uncharacterized, incl. C-type lectin fold, and GldM C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1964_Mostly_uncharacterized,_incl._C-type_lectin_fold,_and_GldM_C-terminal_domain


id: CL:1966
description: Mixed, incl. C-type lectin fold, and GldM C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1966_Mixed,_incl._C-type_lectin_fold,_and_GldM_C-terminal_domain


id: CL:1969
description: Mixed, incl. GldM C-terminal domain, and C-type lectin fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1969_Mixed,_incl._GldM_C-terminal_domain,_and_C-type_lectin_fold


id: CL:1997
description: Mixed, incl. Gliding motility-associated, C-terminal domain, and WD40-like beta propeller
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:1997_Mixed,_incl._Gliding_motility-associated,_C-terminal_domain,_and_WD40-like_beta_propeller


id: CL:2009
description: Mixed, incl. WD40-like beta propeller, and Protein of unknown function DUF4249
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2009_Mixed,_incl._WD40-like_beta_propeller,_and_Protein_of_unknown_function_DUF4249


id: CL:2020
description: Mostly uncharacterized, incl. Membrane organization, and ArsC family
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2020_Mostly_uncharacterized,_incl._Membrane_organization,_and_ArsC_family


id: CL:2023
description: Mixed, incl. Chaperone protein Skp, and Bacterial surface antigen (D15)
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2023_Mixed,_incl._Chaperone_protein_Skp,_and_Bacterial_surface_antigen_(D15)


id: CL:2025
description: Mixed, incl. Long-chain fatty acid transporter activity, and Carbohydrate binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2025_Mixed,_incl._Long-chain_fatty_acid_transporter_activity,_and_Carbohydrate_binding


id: CL:2042
description: Chaperone protein Skp, and Bacterial surface antigen (D15)
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2042_Chaperone_protein_Skp,_and_Bacterial_surface_antigen_(D15)


id: CL:2065
description: Mixed, incl. MatE, and Peptidase M23
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2065_Mixed,_incl._MatE,_and_Peptidase_M23


id: CL:2084
description: Mixed, incl. Von Willebrand factor A-like domain superfamily, and Organelle membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2084_Mixed,_incl._Von_Willebrand_factor_A-like_domain_superfamily,_and_Organelle_membrane


id: CL:2086
description: Mixed, incl. Chromosome segregation, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2086_Mixed,_incl._Chromosome_segregation,_and_Tetratricopeptide_repeat


id: CL:2110
description: Mixed, incl. Sigma-70, region 4, and Tail specific protease
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2110_Mixed,_incl._Sigma-70,_region_4,_and_Tail_specific_protease


id: CL:2112
description: Sigma-70, region 4, and Secretion system C-terminal sorting domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2112_Sigma-70,_region_4,_and_Secretion_system_C-terminal_sorting_domain


id: CL:2125
description: Mixed, incl. Protein of unknown function DUF3078, and Chaperone protein Skp
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2125_Mixed,_incl._Protein_of_unknown_function_DUF3078,_and_Chaperone_protein_Skp


id: CL:2135
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2135_Mostly_uncharacterized,_incl._Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides,_and_GH3_family

description:
  Mostly uncharacterized, incl. Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides, and GH3 family


id: CL:2136
description: Mostly uncharacterized, incl. Amidase activity, and ANL, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2136_Mostly_uncharacterized,_incl._Amidase_activity,_and_ANL,_N-terminal_domain


id: CL:2138
description: Mixed, incl. ANL, N-terminal domain, and Reproduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2138_Mixed,_incl._ANL,_N-terminal_domain,_and_Reproduction


id: CL:214
description: Ribosomal small subunit biogenesis, and tRNA (guanine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:214_Ribosomal_small_subunit_biogenesis,_and_tRNA_(guanine)_methyltransferase_activity


id: CL:2141
description: Mixed, incl. Reproduction, and Ureohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2141_Mixed,_incl._Reproduction,_and_Ureohydrolase


id: CL:2166
description: Mixed, incl. Amidase activity, and Protein carboxylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2166_Mixed,_incl._Amidase_activity,_and_Protein_carboxylation


id: CL:2182
description: Mixed, incl. AAA domain, and GH3 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2182_Mixed,_incl._AAA_domain,_and_GH3_family


id: CL:2198
description: Mixed, incl. Von Willebrand factor (vWF) type A domain, and ATPase, AAA-3
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2198_Mixed,_incl._Von_Willebrand_factor_(vWF)_type_A_domain,_and_ATPase,_AAA-3


id: CL:2201
description: Aerotolerance-related protein BatD, and Aerotolerance regulator N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2201_Aerotolerance-related_protein_BatD,_and_Aerotolerance_regulator_N-terminal


id: CL:2216
description: Mixed, incl. PPIC-type PPIASE domain, and ATPase, AAA-3
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2216_Mixed,_incl._PPIC-type_PPIASE_domain,_and_ATPase,_AAA-3


id: CL:2227
description: Mixed, incl. Nucleotide catabolic process, and Ribokinase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2227_Mixed,_incl._Nucleotide_catabolic_process,_and_Ribokinase-like


id: CL:2229
description: Ribokinase-like, and Nucleotide catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2229_Ribokinase-like,_and_Nucleotide_catabolic_process


id: CL:2250
description: Mixed, incl. Putative auto-transporter adhesin, head GIN domain, and Chloride transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2250_Mixed,_incl._Putative_auto-transporter_adhesin,_head_GIN_domain,_and_Chloride_transport


id: CL:2252
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2252_Mixed,_incl._Putative_auto-transporter_adhesin,_head_GIN_domain,_and_Protein_of_unknown_function_DUF4442

description:
  Mixed, incl. Putative auto-transporter adhesin, head GIN domain, and Protein of unknown function DUF4442


id: CL:2275
description: Mixed, incl. Glycosyltransferase activity, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2275_Mixed,_incl._Glycosyltransferase_activity,_and_Signal


id: CL:2276
description: Mixed, incl. Glycosyl transferase, family 1, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2276_Mixed,_incl._Glycosyl_transferase,_family_1,_and_Nucleotide-diphospho-sugar_transferases


id: CL:2278
description: Mixed, incl. Glycosyl transferase, family 1, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2278_Mixed,_incl._Glycosyl_transferase,_family_1,_and_Nucleotide-diphospho-sugar_transferases


id: CL:2279
description: Mostly uncharacterized, incl. Glycosyl transferases group 1, and Membrane assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2279_Mostly_uncharacterized,_incl._Glycosyl_transferases_group_1,_and_Membrane_assembly


id: CL:2282
description: Mixed, incl. Glycosyl transferases group 1, and Glycosyltransferase 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2282_Mixed,_incl._Glycosyl_transferases_group_1,_and_Glycosyltransferase_2-like


id: CL:2284
description: Mixed, incl. Glycosyl transferases group 1, and Lipid glycosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2284_Mixed,_incl._Glycosyl_transferases_group_1,_and_Lipid_glycosylation


id: CL:2287
description: Glycosyl transferases group 1, and Glycosyltransferase 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2287_Glycosyl_transferases_group_1,_and_Glycosyltransferase_2-like


id: CL:2308
description: Mixed, incl. Glycerophospholipid metabolism, and Lysylphosphatidylglycerol synthase TM region
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2308_Mixed,_incl._Glycerophospholipid_metabolism,_and_Lysylphosphatidylglycerol_synthase_TM_region


id: CL:2309
description: Mixed, incl. Heme metabolic process, and Outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2309_Mixed,_incl._Heme_metabolic_process,_and_Outer_membrane


id: CL:2320
description: Mixed, incl. Ubiquinone metabolic process, and Dihydroorotate dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2320_Mixed,_incl._Ubiquinone_metabolic_process,_and_Dihydroorotate_dehydrogenase


id: CL:2336
description: Mixed, incl. Gliding motility-associated, C-terminal domain, and Cell envelope organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2336_Mixed,_incl._Gliding_motility-associated,_C-terminal_domain,_and_Cell_envelope_organization


id: CL:2341
description: Mixed, incl. Type IX secretion system protein PorV, and Peptidoglycan glycosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2341_Mixed,_incl._Type_IX_secretion_system_protein_PorV,_and_Peptidoglycan_glycosyltransferase_activity


id: CL:2363
description: Glycosyl transferase, family 1, and Alginate O-acetyltransferase AlgI
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2363_Glycosyl_transferase,_family_1,_and_Alginate_O-acetyltransferase_AlgI


id: CL:2387
description: Mostly uncharacterized, incl. CHU_C Type IX secretion signal domain, and Detoxification
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2387_Mostly_uncharacterized,_incl._CHU_C_Type_IX_secretion_signal_domain,_and_Detoxification


id: CL:2388
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2388_Mostly_uncharacterized,_incl._CHU_C_Type_IX_secretion_signal_domain,_and_Pectin_lyase_fold/virulence_factor

description:
  Mostly uncharacterized, incl. CHU_C Type IX secretion signal domain, and Pectin lyase fold/virulence factor


id: CL:2390
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2390_Mostly_uncharacterized,_incl._CHU_C_Type_IX_secretion_signal_domain,_and_Pectin_lyase_fold/virulence_factor

description:
  Mostly uncharacterized, incl. CHU_C Type IX secretion signal domain, and Pectin lyase fold/virulence factor


id: CL:2392
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2392_Mostly_uncharacterized,_incl._CHU_C_Type_IX_secretion_signal_domain,_and_Pectin_lyase_fold/virulence_factor

description:
  Mostly uncharacterized, incl. CHU_C Type IX secretion signal domain, and Pectin lyase fold/virulence factor


id: CL:2394
description: Mixed, incl. CHU_C Type IX secretion signal domain, and Pectin lyase fold/virulence factor
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2394_Mixed,_incl._CHU_C_Type_IX_secretion_signal_domain,_and_Pectin_lyase_fold/virulence_factor


id: CL:2396
description: Mixed, incl. CHU_C Type IX secretion signal domain, and Pectin lyase fold/virulence factor
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2396_Mixed,_incl._CHU_C_Type_IX_secretion_signal_domain,_and_Pectin_lyase_fold/virulence_factor


id: CL:2399
description: Mixed, incl. Type IX secretion system membrane protein PorP/SprF, and SprB repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2399_Mixed,_incl._Type_IX_secretion_system_membrane_protein_PorP/SprF,_and_SprB_repeat


id: CL:2416
description: Mixed, incl. RmlC-like cupin domain superfamily, and Response to heat
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2416_Mixed,_incl._RmlC-like_cupin_domain_superfamily,_and_Response_to_heat


id: CL:2446
description: Mixed, incl. Glycosyltransferase Family 4, and Anion transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2446_Mixed,_incl._Glycosyltransferase_Family_4,_and_Anion_transmembrane_transport


id: CL:2465
description: Mixed, incl. FAD binding domain, and Fatty acid hydroxylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2465_Mixed,_incl._FAD_binding_domain,_and_Fatty_acid_hydroxylase


id: CL:2476
description: Mixed, incl. beta-Alanine metabolism, and Developmental process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2476_Mixed,_incl._beta-Alanine_metabolism,_and_Developmental_process


id: CL:2478
description: Mixed, incl. beta-Alanine metabolism, and Esterase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2478_Mixed,_incl._beta-Alanine_metabolism,_and_Esterase-like


id: CL:2479
description: Mixed, incl. Esterase-like, and Glucan metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2479_Mixed,_incl._Esterase-like,_and_Glucan_metabolic_process


id: CL:2506
description: Mixed, incl. Ion channel, and rRNA small subunit methyltransferase I
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2506_Mixed,_incl._Ion_channel,_and_rRNA_small_subunit_methyltransferase_I


id: CL:2517
description: Mixed, incl. Lipopolysaccharide biosynthesis, and ABC transporters
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2517_Mixed,_incl._Lipopolysaccharide_biosynthesis,_and_ABC_transporters


id: CL:2518
description: Lipopolysaccharide biosynthesis, and Permease LptG/LptF-related
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2518_Lipopolysaccharide_biosynthesis,_and_Permease_LptG/LptF-related


id: CL:2520
description: Lipopolysaccharide biosynthesis, and Permease LptG/LptF-related
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2520_Lipopolysaccharide_biosynthesis,_and_Permease_LptG/LptF-related


id: CL:2522
description: Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2522_Lipopolysaccharide_biosynthesis


id: CL:2565
description: Mixed, incl. Lipid transport, and Carbohydrate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2565_Mixed,_incl._Lipid_transport,_and_Carbohydrate_metabolism


id: CL:2566
description: Mixed, incl. Lipid transport, and Carbohydrate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2566_Mixed,_incl._Lipid_transport,_and_Carbohydrate_metabolism


id: CL:2568
description: Mixed, incl. RutC-like superfamily, and NarG-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2568_Mixed,_incl._RutC-like_superfamily,_and_NarG-like_superfamily


id: CL:2584
description: Phospholipid transport, and Lipid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2584_Phospholipid_transport,_and_Lipid_transport


id: CL:2593
description: Mixed, incl. Response to pH, and DinB superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2593_Mixed,_incl._Response_to_pH,_and_DinB_superfamily


id: CL:2595
description: Mixed, incl. DinB superfamily, and Methyltransferase small domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2595_Mixed,_incl._DinB_superfamily,_and_Methyltransferase_small_domain


id: CL:2612
description: Mixed, incl. Coenzyme A biosynthetic process, and DNA duplex unwinding
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2612_Mixed,_incl._Coenzyme_A_biosynthetic_process,_and_DNA_duplex_unwinding


id: CL:2613
description: Mixed, incl. Coenzyme A biosynthetic process, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2613_Mixed,_incl._Coenzyme_A_biosynthetic_process,_and_AAA_domain


id: CL:2615
description: Mixed, incl. AAA domain, and Peptidase S49
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2615_Mixed,_incl._AAA_domain,_and_Peptidase_S49


id: CL:2634
description: Coenzyme A biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2634_Coenzyme_A_biosynthetic_process


id: CL:2648
description: Mixed, incl. Primosome, and Integral component of plasma membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2648_Mixed,_incl._Primosome,_and_Integral_component_of_plasma_membrane


id: CL:2658
description: Mixed, incl. Dipeptidase, and ABC-transporter extension domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2658_Mixed,_incl._Dipeptidase,_and_ABC-transporter_extension_domain


id: CL:266
description: Protein targeting, and Protein carrier chaperone
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:266_Protein_targeting,_and_Protein_carrier_chaperone


id: CL:2672
description: Mixed, incl. Isoprenoid metabolic process, and Thiol-activated cytolysin
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2672_Mixed,_incl._Isoprenoid_metabolic_process,_and_Thiol-activated_cytolysin


id: CL:2674
description: Terpenoid backbone biosynthesis, and AsmA-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2674_Terpenoid_backbone_biosynthesis,_and_AsmA-like,_C-terminal


id: CL:2676
description: GHMP kinase, C-terminal domain superfamily, and Terpenoid backbone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2676_GHMP_kinase,_C-terminal_domain_superfamily,_and_Terpenoid_backbone_biosynthesis


id: CL:2690
description: Mixed, incl. AsmA-like, C-terminal, and Ubiquinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2690_Mixed,_incl._AsmA-like,_C-terminal,_and_Ubiquinone_metabolic_process


id: CL:2705
description: Mixed, incl. Carotenoid biosynthesis, and Short chain dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2705_Mixed,_incl._Carotenoid_biosynthesis,_and_Short_chain_dehydrogenase


id: CL:2707
description: Carotenoid biosynthesis, and Intramolecular lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2707_Carotenoid_biosynthesis,_and_Intramolecular_lyase_activity


id: CL:2733
description: Mostly uncharacterized, incl. MORN variant, and RNA polymerase binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2733_Mostly_uncharacterized,_incl._MORN_variant,_and_RNA_polymerase_binding


id: CL:2734
description: Mixed, incl. MORN variant, and Antibiotic biosynthesis monooxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2734_Mixed,_incl._MORN_variant,_and_Antibiotic_biosynthesis_monooxygenase


id: CL:2745
description: Mixed, incl. RNA polymerase binding, and Amidohydrolase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2745_Mixed,_incl._RNA_polymerase_binding,_and_Amidohydrolase_family


id: CL:2754
description: Mixed, incl. Intracellular signal transduction, and Queuosine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2754_Mixed,_incl._Intracellular_signal_transduction,_and_Queuosine_biosynthesis


id: CL:2755
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2755_Mixed,_incl._Intracellular_signal_transduction,_and_Lipid/polyisoprenoid-binding,_YceI-like_superfamily

description:
  Mixed, incl. Intracellular signal transduction, and Lipid/polyisoprenoid-binding, YceI-like superfamily


id: CL:2757
description: Mostly uncharacterized, incl. MatE, and ABC-2 type transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2757_Mostly_uncharacterized,_incl._MatE,_and_ABC-2_type_transporter


id: CL:2758
description: Mostly uncharacterized, incl. MatE, and ABC-2 type transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2758_Mostly_uncharacterized,_incl._MatE,_and_ABC-2_type_transporter


id: CL:2760
description: Mixed, incl. MatE, and Protein of unknown function DUF2490
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2760_Mixed,_incl._MatE,_and_Protein_of_unknown_function_DUF2490


id: CL:2779
description: Mixed, incl. Mtb iron assimilation by chelation, and Hydrolase activity, acting on ester bonds
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2779_Mixed,_incl._Mtb_iron_assimilation_by_chelation,_and_Hydrolase_activity,_acting_on_ester_bonds


id: CL:2796
description: 2TM domain, and LytTR DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2796_2TM_domain,_and_LytTR_DNA-binding_domain


id: CL:2812
description: Mixed, incl. Queuosine biosynthesis, and NUDIX domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2812_Mixed,_incl._Queuosine_biosynthesis,_and_NUDIX_domain


id: CL:2814
description: Mixed, incl. Nucleoside recognition, and Cytochrome c
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2814_Mixed,_incl._Nucleoside_recognition,_and_Cytochrome_c


id: CL:2832
description: Mixed, incl. NUDIX domain, and Exoribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2832_Mixed,_incl._NUDIX_domain,_and_Exoribonuclease_activity


id: CL:2845
description: Mixed, incl. Localization, and Cellular carbohydrate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2845_Mixed,_incl._Localization,_and_Cellular_carbohydrate_biosynthetic_process


id: CL:2846
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2846_Mostly_uncharacterized,_incl._Cellular_carbohydrate_biosynthetic_process,_and_Hydrolase_activity,_acting_on_ester_bonds

description:
  Mostly uncharacterized, incl. Cellular carbohydrate biosynthetic process, and Hydrolase activity, acting on ester bonds


id: CL:2847
description: Mixed, incl. Hydrolase activity, acting on ester bonds, and Envelope
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2847_Mixed,_incl._Hydrolase_activity,_acting_on_ester_bonds,_and_Envelope


id: CL:2848
description: Mostly uncharacterized, incl. Endonuclease V, and Fibronectin type III superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2848_Mostly_uncharacterized,_incl._Endonuclease_V,_and_Fibronectin_type_III_superfamily


id: CL:2849
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2849_Mostly_uncharacterized,_incl._Organic_acid_transmembrane_transporter_activity,_and_Glycosyltransferase_2-like

description:
  Mostly uncharacterized, incl. Organic acid transmembrane transporter activity, and Glycosyltransferase 2-like


id: CL:2850
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2850_Mostly_uncharacterized,_incl._Organic_acid_transmembrane_transporter_activity,_and_Ppx/GppA_phosphatase_family

description:
  Mostly uncharacterized, incl. Organic acid transmembrane transporter activity, and Ppx/GppA phosphatase family


id: CL:2852
description: Mixed, incl. Outer membrane protein beta-barrel domain, and Band 7 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2852_Mixed,_incl._Outer_membrane_protein_beta-barrel_domain,_and_Band_7_domain


id: CL:2868
description: Mixed, incl. Antibiotic metabolic process, and Beta-lactamase
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2868_Mixed,_incl._Antibiotic_metabolic_process,_and_Beta-lactamase


id: CL:2884
description: NodB homology domain, and Glycosyltransferase 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2884_NodB_homology_domain,_and_Glycosyltransferase_2-like


id: CL:2898
description: Mixed, incl. Endonuclease V, and Fibronectin type III superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2898_Mixed,_incl._Endonuclease_V,_and_Fibronectin_type_III_superfamily


id: CL:2901
description: Fibronectin type III superfamily, and SprB repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2901_Fibronectin_type_III_superfamily,_and_SprB_repeat


id: CL:2919
description: Mixed, incl. Alginate O-acetyltransferase AlgI, and SGNH hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2919_Mixed,_incl._Alginate_O-acetyltransferase_AlgI,_and_SGNH_hydrolase_superfamily


id: CL:2920
description: Mixed, incl. Primosome complex, and Arm, DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2920_Mixed,_incl._Primosome_complex,_and_Arm,_DNA-binding_domain


id: CL:2923
description: Primosome complex, and Arm, DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2923_Primosome_complex,_and_Arm,_DNA-binding_domain


id: CL:2942
description: Mixed, incl. Alginate O-acetyltransferase AlgI, and SGNH hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2942_Mixed,_incl._Alginate_O-acetyltransferase_AlgI,_and_SGNH_hydrolase_superfamily


id: CL:2956
description: Mixed, incl. Phosphatidic acid phosphatase type 2/haloperoxidase, and Sulfatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2956_Mixed,_incl._Phosphatidic_acid_phosphatase_type_2/haloperoxidase,_and_Sulfatase


id: CL:2957
description: Mixed, incl. Phosphatidic acid phosphatase type 2/haloperoxidase, and Sulfatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2957_Mixed,_incl._Phosphatidic_acid_phosphatase_type_2/haloperoxidase,_and_Sulfatase


id: CL:2959
description: Phosphatidic acid phosphatase type 2/haloperoxidase, and Sulfatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2959_Phosphatidic_acid_phosphatase_type_2/haloperoxidase,_and_Sulfatase


id: CL:297
description: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:297_Aminoacyl-tRNA_synthetase,_class_Ia,_anticodon-binding


id: CL:2978
description: Ion channel, and Antiporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2978_Ion_channel,_and_Antiporter_activity


id: CL:2987
description: Mixed, incl. Receptor, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2987_Mixed,_incl._Receptor,_and_Protein_transport


id: CL:2988
description: Mixed, incl. Receptor, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2988_Mixed,_incl._Receptor,_and_Protein_transport


id: CL:2990
description: Mixed, incl. Protein transport, and TonB-dependent receptor-like, beta-barrel domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2990_Mixed,_incl._Protein_transport,_and_TonB-dependent_receptor-like,_beta-barrel_domain_superfamily


id: CL:2992
description: Mixed, incl. Biopolymer transport protein ExbD/TolR, and TonB, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2992_Mixed,_incl._Biopolymer_transport_protein_ExbD/TolR,_and_TonB,_C-terminal


id: CL:2994
description: Mixed, incl. TonB, C-terminal, and Biopolymer transport protein ExbD/TolR
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2994_Mixed,_incl._TonB,_C-terminal,_and_Biopolymer_transport_protein_ExbD/TolR


id: CL:2997
description: Mixed, incl. Biopolymer transport protein ExbD/TolR, and Phosphate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:2997_Mixed,_incl._Biopolymer_transport_protein_ExbD/TolR,_and_Phosphate_ion_transport


id: CL:3026
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3026_Mixed,_incl._TonB-dependent_receptor,_conserved_site,_and_Carboxypeptidase-like,_regulatory_domain_superfamily

description:
  Mixed, incl. TonB-dependent receptor, conserved site, and Carboxypeptidase-like, regulatory domain superfamily


id: CL:3027
description: Mixed, incl. Peptidase family M28, and Dipeptidylpeptidase IV, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3027_Mixed,_incl._Peptidase_family_M28,_and_Dipeptidylpeptidase_IV,_N-terminal_domain


id: CL:3040
description: TonB-dependent receptor, conserved site, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3040_TonB-dependent_receptor,_conserved_site,_and_ABC-2_family_transporter_protein


id: CL:3056
description: Mixed, incl. Ribonucleoside-diphosphate reductase complex, and EamA-like transporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3056_Mixed,_incl._Ribonucleoside-diphosphate_reductase_complex,_and_EamA-like_transporter_family


id: CL:3065
description: Mixed, incl. Cell adhesion, and Serine aminopeptidase, S33
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3065_Mixed,_incl._Cell_adhesion,_and_Serine_aminopeptidase,_S33


id: CL:3076
description: Mixed, incl. Major Facilitator Superfamily, and Peptidase S46
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3076_Mixed,_incl._Major_Facilitator_Superfamily,_and_Peptidase_S46


id: CL:3077
description: Mixed, incl. Major Facilitator Superfamily, and Peptidase S46
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3077_Mixed,_incl._Major_Facilitator_Superfamily,_and_Peptidase_S46


id: CL:3079
description: Major Facilitator Superfamily, and PAS fold-3
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3079_Major_Facilitator_Superfamily,_and_PAS_fold-3


id: CL:3098
description: Mixed, incl. TatD related DNase, and ThiF family
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3098_Mixed,_incl._TatD_related_DNase,_and_ThiF_family


id: CL:3109
description: Mixed, incl. Outer membrane protein beta-barrel domain 2, and ArsC family
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3109_Mixed,_incl._Outer_membrane_protein_beta-barrel_domain_2,_and_ArsC_family


id: CL:3110
description: Mixed, incl. Outer membrane protein beta-barrel domain 2, and ArsC family
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3110_Mixed,_incl._Outer_membrane_protein_beta-barrel_domain_2,_and_ArsC_family


id: CL:3123
description: Mixed, incl. Calcineurin-like phosphoesterase, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3123_Mixed,_incl._Calcineurin-like_phosphoesterase,_and_Signal


id: CL:3132
description: Mixed, incl. Chitin binding, and Peptidase M15C
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3132_Mixed,_incl._Chitin_binding,_and_Peptidase_M15C


id: CL:3134
description: Mixed, incl. Chitin binding, and OsmC/Ohr family
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3134_Mixed,_incl._Chitin_binding,_and_OsmC/Ohr_family


id: CL:3155
description: Mixed, incl. Aromatic amino acid family catabolic process, and Hydrogen peroxide
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3155_Mixed,_incl._Aromatic_amino_acid_family_catabolic_process,_and_Hydrogen_peroxide


id: CL:3156
description: Mixed, incl. Aromatic amino acid family catabolic process, and Hydrogen peroxide
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3156_Mixed,_incl._Aromatic_amino_acid_family_catabolic_process,_and_Hydrogen_peroxide


id: CL:3157
description: Mixed, incl. Tryptophan metabolism, and Putative cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3157_Mixed,_incl._Tryptophan_metabolism,_and_Putative_cyclase


id: CL:3158
description: Mixed, incl. Amine catabolic process, and Hydrogen peroxide
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3158_Mixed,_incl._Amine_catabolic_process,_and_Hydrogen_peroxide


id: CL:316
description: tRNA synthetase class II core domain (G, H, P, S and T), and Leucyl-tRNA synthetase, Domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:316_tRNA_synthetase_class_II_core_domain_(G,_H,_P,_S_and_T),_and_Leucyl-tRNA_synthetase,_Domain_2


id: CL:3161
description: Amine catabolic process, and Hydrogen peroxide
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3161_Amine_catabolic_process,_and_Hydrogen_peroxide


id: CL:3185
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3185_Mixed,_incl._Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_and_Intramolecular_lyase_activity

description:
  Mixed, incl. Oxidoreductase activity, acting on the CH-NH2 group of donors, and Intramolecular lyase activity


id: CL:3197
description: Tyrosine metabolism, and RNA polymerase binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3197_Tyrosine_metabolism,_and_RNA_polymerase_binding


id: CL:3216
description: Mixed, incl. Tail specific protease, and FMN-binding split barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3216_Mixed,_incl._Tail_specific_protease,_and_FMN-binding_split_barrel


id: CL:3229
description: Mixed, incl. DNA binding HTH domain, AraC-type, and DoxX
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3229_Mixed,_incl._DNA_binding_HTH_domain,_AraC-type,_and_DoxX


id: CL:3231
description: DNA binding HTH domain, AraC-type, and ATP-binding cassette (ABC) transporter complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3231_DNA_binding_HTH_domain,_AraC-type,_and_ATP-binding_cassette_(ABC)_transporter_complex


id: CL:3246
description: Mixed, incl. DapA-like, and Cupin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3246_Mixed,_incl._DapA-like,_and_Cupin_domain


id: CL:3262
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3262_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthetic_process


id: CL:3263
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3263_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Nucleotide-diphospho-sugar_transferases


id: CL:3264
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3264_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthetic_process


id: CL:3266
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Bacterial sugar transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3266_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Bacterial_sugar_transferase


id: CL:3267
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Bacterial sugar transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3267_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Bacterial_sugar_transferase


id: CL:3268
description: O-Antigen nucleotide sugar biosynthesis, and Chondroitin AC lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3268_O-Antigen_nucleotide_sugar_biosynthesis,_and_Chondroitin_AC_lyase_activity


id: CL:3269
description: Polyketide sugar unit biosynthesis, and Amino sugar and nucleotide sugar metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3269_Polyketide_sugar_unit_biosynthesis,_and_Amino_sugar_and_nucleotide_sugar_metabolism


id: CL:3272
description: Polyketide sugar unit biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3272_Polyketide_sugar_unit_biosynthesis


id: CL:3294
description: O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3294_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:3307
description: Mixed, incl. Polysaccharide transport, and Tyrosine kinase, G-rich domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3307_Mixed,_incl._Polysaccharide_transport,_and_Tyrosine_kinase,_G-rich_domain


id: CL:3320
description: Fructose and mannose metabolism, and Glycosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3320_Fructose_and_mannose_metabolism,_and_Glycosylation


id: CL:3337
description: Mixed, incl. DegT/DnrJ/EryC1/StrS aminotransferase, and Aminoacyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3337_Mixed,_incl._DegT/DnrJ/EryC1/StrS_aminotransferase,_and_Aminoacyltransferase_activity


id: CL:3353
description: Mixed, incl. Glycosyltransferase like family 2, and RNA 3-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3353_Mixed,_incl._Glycosyltransferase_like_family_2,_and_RNA_3-end_processing


id: CL:3355
description: Mixed, incl. RNA 3-end processing, and Telomere recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3355_Mixed,_incl._RNA_3-end_processing,_and_Telomere_recombination


id: CL:336
description: ATP-dependent activity, acting on RNA, and K Homology domain, type 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:336_ATP-dependent_activity,_acting_on_RNA,_and_K_Homology_domain,_type_1


id: CL:3377
description: Protein tyrosine phosphatase activity, and Methyltransferase small domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3377_Protein_tyrosine_phosphatase_activity,_and_Methyltransferase_small_domain


id: CL:3398
description: Mixed, incl. Tetrapyrrole metabolic process, and Sulfur compound biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3398_Mixed,_incl._Tetrapyrrole_metabolic_process,_and_Sulfur_compound_biosynthetic_process


id: CL:3399
description: Mixed, incl. Sulfur compound biosynthetic process, and Electron transfer activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3399_Mixed,_incl._Sulfur_compound_biosynthetic_process,_and_Electron_transfer_activity


id: CL:3400
description: Mixed, incl. Heme binding, and Crp-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3400_Mixed,_incl._Heme_binding,_and_Crp-type_HTH_domain


id: CL:3402
description: Mixed, incl. Heme binding, and Crp-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3402_Mixed,_incl._Heme_binding,_and_Crp-type_HTH_domain


id: CL:3403
description: Mixed, incl. Heme, and Transcription regulator Rrf2
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3403_Mixed,_incl._Heme,_and_Transcription_regulator_Rrf2


id: CL:3404
description: Mixed, incl. Transcription regulator Rrf2, and Globin/Protoglobin
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3404_Mixed,_incl._Transcription_regulator_Rrf2,_and_Globin/Protoglobin


id: CL:3407
description: Mixed, incl. Pectin lyase fold, and Calcium ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3407_Mixed,_incl._Pectin_lyase_fold,_and_Calcium_ion_binding


id: CL:3429
description: Nitrogen metabolism, and ATPase, dynein-related, AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3429_Nitrogen_metabolism,_and_ATPase,_dynein-related,_AAA_domain


id: CL:3448
description: Mixed, incl. Crp-type HTH domain, and Heme binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3448_Mixed,_incl._Crp-type_HTH_domain,_and_Heme_binding


id: CL:3452
description: Mixed, incl. Plasma membrane respirasome, and Cytochrome C oxidase, cbb3-type, subunit III
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3452_Mixed,_incl._Plasma_membrane_respirasome,_and_Cytochrome_C_oxidase,_cbb3-type,_subunit_III


id: CL:3480
description: Mixed, incl. TPM domain, and Protein ubiquitination
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3480_Mixed,_incl._TPM_domain,_and_Protein_ubiquitination


id: CL:3491
description: Mixed, incl. Sulfur compound biosynthetic process, and Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3491_Mixed,_incl._Sulfur_compound_biosynthetic_process,_and_Prosthetic_group_metabolic_process


id: CL:3492
description: Mixed, incl. Thiamine metabolism, and Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3492_Mixed,_incl._Thiamine_metabolism,_and_Prosthetic_group_metabolic_process


id: CL:3493
description: Mixed, incl. Prosthetic group metabolic process, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3493_Mixed,_incl._Prosthetic_group_metabolic_process,_and_Nitrogen_metabolism


id: CL:3496
description: Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3496_Prosthetic_group_metabolic_process


id: CL:3511
description: Mixed, incl. Nitrate transporter, and NarG-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3511_Mixed,_incl._Nitrate_transporter,_and_NarG-like_superfamily


id: CL:3526
description: Thiamine metabolic process, and Mitochondrial biogenesis AIM24
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3526_Thiamine_metabolic_process,_and_Mitochondrial_biogenesis_AIM24


id: CL:354
description: Protein folding, and Rhodanese Homology Domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:354_Protein_folding,_and_Rhodanese_Homology_Domain


id: CL:3558
description: Biotin metabolic process, and Aminotransferase, class I/classII
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3558_Biotin_metabolic_process,_and_Aminotransferase,_class_I/classII


id: CL:356
description: Stress response, and Cyclophilin-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:356_Stress_response,_and_Cyclophilin-like_domain_superfamily


id: CL:3576
description: Mixed, incl. Tetrapyrrole metabolic process, and Peptidase family M1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3576_Mixed,_incl._Tetrapyrrole_metabolic_process,_and_Peptidase_family_M1_domain


id: CL:3578
description: Porphyrin and chlorophyll metabolism, and Nickel cation transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3578_Porphyrin_and_chlorophyll_metabolism,_and_Nickel_cation_transport


id: CL:3579
description: Mixed, incl. Cobalamin metabolic process, and Nickel cation transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3579_Mixed,_incl._Cobalamin_metabolic_process,_and_Nickel_cation_transport


id: CL:358
description: Protein folding chaperone, and DnaJ domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:358_Protein_folding_chaperone,_and_DnaJ_domain


id: CL:3581
description: Cobalamin metabolic process, and Nickel cation transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3581_Cobalamin_metabolic_process,_and_Nickel_cation_transport


id: CL:3583
description: Mixed, incl. Tetrapyrrole methylase, and Cobalamin biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3583_Mixed,_incl._Tetrapyrrole_methylase,_and_Cobalamin_biosynthesis


id: CL:3586
description: Tetrapyrrole methylase, and precorrin-6A reductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3586_Tetrapyrrole_methylase,_and_precorrin-6A_reductase_activity


id: CL:3621
description: Mixed, incl. Cobalamin metabolic process, and Diphthamide synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3621_Mixed,_incl._Cobalamin_metabolic_process,_and_Diphthamide_synthase


id: CL:3623
description: Cobalamin biosynthesis, and Diphthamide synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3623_Cobalamin_biosynthesis,_and_Diphthamide_synthase


id: CL:3640
description: Porphyrin-containing compound metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3640_Porphyrin-containing_compound_metabolic_process


id: CL:3643
description: Uroporphyrinogen-III synthase, and Heme biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3643_Uroporphyrinogen-III_synthase,_and_Heme_biosynthetic_process


id: CL:3658
description: Coproporphyrinogen oxidase activity, and Heme biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3658_Coproporphyrinogen_oxidase_activity,_and_Heme_biosynthesis


id: CL:3674
description: Mostly uncharacterized, incl. Peptidase family M1 domain, and DoxX
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3674_Mostly_uncharacterized,_incl._Peptidase_family_M1_domain,_and_DoxX


id: CL:3675
description: Mostly uncharacterized, incl. Peptidase family M1 domain, and DinB-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3675_Mostly_uncharacterized,_incl._Peptidase_family_M1_domain,_and_DinB-like_domain


id: CL:3676
description: Mixed, incl. GlcNAc-PI de-N-acetylase, and Aldehyde catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3676_Mixed,_incl._GlcNAc-PI_de-N-acetylase,_and_Aldehyde_catabolic_process


id: CL:3678
description: Mixed, incl. GlcNAc-PI de-N-acetylase, and Glycosyl transferase 4-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3678_Mixed,_incl._GlcNAc-PI_de-N-acetylase,_and_Glycosyl_transferase_4-like


id: CL:3695
description: Mixed, incl. DinB-like domain, and DNA replication initiation
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3695_Mixed,_incl._DinB-like_domain,_and_DNA_replication_initiation


id: CL:3706
description: Mixed, incl. DoxX, and Phosphate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3706_Mixed,_incl._DoxX,_and_Phosphate_ion_transport


id: CL:3718
description: Iron-sulfur cluster assembly, and Cysteine desulfurase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3718_Iron-sulfur_cluster_assembly,_and_Cysteine_desulfurase_activity


id: CL:3722
description: SUF system FeS cluster assembly, SufBD, and Cysteine desulfurase
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3722_SUF_system_FeS_cluster_assembly,_SufBD,_and_Cysteine_desulfurase


id: CL:3750
description: Mixed, incl. Ubiquinone and other terpenoid-quinone biosynthesis, and Ether hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3750_Mixed,_incl._Ubiquinone_and_other_terpenoid-quinone_biosynthesis,_and_Ether_hydrolase_activity


id: CL:3753
description: Ubiquinone and other terpenoid-quinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3753_Ubiquinone_and_other_terpenoid-quinone_biosynthesis


id: CL:3770
description: Mixed, incl. Ether hydrolase activity, and Chaperone binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3770_Mixed,_incl._Ether_hydrolase_activity,_and_Chaperone_binding


id: CL:3785
description: Mixed, incl. Transport, and Homeobox-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3785_Mixed,_incl._Transport,_and_Homeobox-like_domain_superfamily


id: CL:3786
description: Mixed, incl. Transporter activity, and ABC transporter-like, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3786_Mixed,_incl._Transporter_activity,_and_ABC_transporter-like,_conserved_site


id: CL:3787
description: Mixed, incl. Transporter activity, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3787_Mixed,_incl._Transporter_activity,_and_MacB,_ATP-binding_domain


id: CL:3788
description: Mixed, incl. HlyD family secretion protein, and Outer membrane efflux protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3788_Mixed,_incl._HlyD_family_secretion_protein,_and_Outer_membrane_efflux_protein


id: CL:3789
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3789_Mixed,_incl._RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain,_and_Outer_membrane_efflux_protein

description:
  Mixed, incl. RND efflux pump, membrane fusion protein, barrel-sandwich domain, and Outer membrane efflux protein


id: CL:3790
description: Mixed, incl. HlyD family secretion protein, and Outer membrane efflux protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3790_Mixed,_incl._HlyD_family_secretion_protein,_and_Outer_membrane_efflux_protein


id: CL:3791
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3791_Mixed,_incl._RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain,_and_ABC3_transporter_permease_protein_domain

description:
  Mixed, incl. RND efflux pump, membrane fusion protein, barrel-sandwich domain, and ABC3 transporter permease protein domain


id: CL:3792
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3792_Mixed,_incl._ABC3_transporter_permease_protein_domain,_and_RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain

description:
  Mixed, incl. ABC3 transporter permease protein domain, and RND efflux pump, membrane fusion protein, barrel-sandwich domain


id: CL:3793
description: ABC3 transporter permease protein domain, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3793_ABC3_transporter_permease_protein_domain,_and_MacB,_ATP-binding_domain


id: CL:3795
description: Lipoprotein transport, and FtsX-like permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3795_Lipoprotein_transport,_and_FtsX-like_permease_family


id: CL:3814
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3814_Mixed,_incl._RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain,_and_Outer_membrane_efflux_protein

description:
  Mixed, incl. RND efflux pump, membrane fusion protein, barrel-sandwich domain, and Outer membrane efflux protein


id: CL:3828
description: Mixed, incl. AcrB/AcrD/AcrF family, and Biotin-lipoyl like
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3828_Mixed,_incl._AcrB/AcrD/AcrF_family,_and_Biotin-lipoyl_like


id: CL:383
description: Sulfur dioxygenase activity, and Thioredoxin, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:383_Sulfur_dioxygenase_activity,_and_Thioredoxin,_conserved_site


id: CL:3838
description: Mixed, incl. Membrane fusion protein, biotin-lipoyl like domain, and ABC transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3838_Mixed,_incl._Membrane_fusion_protein,_biotin-lipoyl_like_domain,_and_ABC_transporter


id: CL:3847
description: Mostly uncharacterized, incl. Fido domain, and Sulfate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3847_Mostly_uncharacterized,_incl._Fido_domain,_and_Sulfate_transport


id: CL:3850
description: Mixed, incl. Sulfate transport, and NADH-quinone oxidoreductase, chain 5-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3850_Mixed,_incl._Sulfate_transport,_and_NADH-quinone_oxidoreductase,_chain_5-like


id: CL:3874
description: Mixed, incl. 4Fe-4S single cluster domain, and Transposase IS3/IS911family
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3874_Mixed,_incl._4Fe-4S_single_cluster_domain,_and_Transposase_IS3/IS911family


id: CL:3887
description: Mixed, incl. Carbon utilization, and AhpD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3887_Mixed,_incl._Carbon_utilization,_and_AhpD-like


id: CL:3889
description: Carbon utilization, and Sulfate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3889_Carbon_utilization,_and_Sulfate_transport


id: CL:3907
description: Mostly uncharacterized, incl. IucA / IucC family, and MPN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3907_Mostly_uncharacterized,_incl._IucA_/_IucC_family,_and_MPN_domain


id: CL:3909
description: Mixed, incl. MPN domain, and 5-nucleotidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3909_Mixed,_incl._MPN_domain,_and_5-nucleotidase_activity


id: CL:3926
description: Mixed, incl. IucA / IucC family, and Siderophore biosynthesis protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3926_Mixed,_incl._IucA_/_IucC_family,_and_Siderophore_biosynthesis_protein_domain


id: CL:3945
description: Mixed, incl. Synthesis and degradation of ketone bodies, and Imelysin-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3945_Mixed,_incl._Synthesis_and_degradation_of_ketone_bodies,_and_Imelysin-like_domain_superfamily


id: CL:3946
description: Mixed, incl. Synthesis and degradation of ketone bodies, and Cell gliding
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3946_Mixed,_incl._Synthesis_and_degradation_of_ketone_bodies,_and_Cell_gliding


id: CL:3948
description: Mixed, incl. Synthesis and degradation of ketone bodies, and Cell gliding
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3948_Mixed,_incl._Synthesis_and_degradation_of_ketone_bodies,_and_Cell_gliding


id: CL:3973
description: Mixed, incl. Imelysin-like domain superfamily, and Protein carboxylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3973_Mixed,_incl._Imelysin-like_domain_superfamily,_and_Protein_carboxylation


id: CL:3975
description: Mixed, incl. Protein carboxylation, and Imelysin-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3975_Mixed,_incl._Protein_carboxylation,_and_Imelysin-like_domain_superfamily


id: CL:399
description: DNA topoisomerase, type IIA-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:399_DNA_topoisomerase,_type_IIA-like_domain_superfamily


id: CL:3993
description: Mostly uncharacterized, incl. AAA domain, and Omega peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3993_Mostly_uncharacterized,_incl._AAA_domain,_and_Omega_peptidase_activity


id: CL:3995
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:3995_Mixed,_incl._Glycoside-hydrolase_family_GH114,_and_Glycoside_hydrolase/deacetylase,_beta/alpha-barrel

description:
  Mixed, incl. Glycoside-hydrolase family GH114, and Glycoside hydrolase/deacetylase, beta/alpha-barrel


id: CL:4005
description: Mixed, incl. AAA domain, and Omega peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4005_Mixed,_incl._AAA_domain,_and_Omega_peptidase_activity


id: CL:4021
description: Mixed, incl. Proteolysis, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4021_Mixed,_incl._Proteolysis,_and_Signal


id: CL:4022
description: Mixed, incl. Proteolysis, and Regulation of cellular metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4022_Mixed,_incl._Proteolysis,_and_Regulation_of_cellular_metabolic_process


id: CL:4023
description: Mixed, incl. Proteolysis, and Envelope
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4023_Mixed,_incl._Proteolysis,_and_Envelope


id: CL:4024
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4024_Mixed,_incl._Secretion_system_C-terminal_sorting_domain,_and_Metallopeptidase,_catalytic_domain_superfamily

description:
  Mixed, incl. Secretion system C-terminal sorting domain, and Metallopeptidase, catalytic domain superfamily


id: CL:4025
description: Mixed, incl. Secretion system C-terminal sorting domain, and GNAT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4025_Mixed,_incl._Secretion_system_C-terminal_sorting_domain,_and_GNAT_domain


id: CL:4026
description: Mixed, incl. Secretion system C-terminal sorting domain, and Pregnancy-associated plasma protein-A
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4026_Mixed,_incl._Secretion_system_C-terminal_sorting_domain,_and_Pregnancy-associated_plasma_protein-A


id: CL:4027
description: Mixed, incl. Secretion system C-terminal sorting domain, and Pregnancy-associated plasma protein-A
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4027_Mixed,_incl._Secretion_system_C-terminal_sorting_domain,_and_Pregnancy-associated_plasma_protein-A


id: CL:4029
description: Mixed, incl. Pregnancy-associated plasma protein-A, and FTP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4029_Mixed,_incl._Pregnancy-associated_plasma_protein-A,_and_FTP_domain


id: CL:4030
description: Mixed, incl. Fibronectin type III, and FTP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4030_Mixed,_incl._Fibronectin_type_III,_and_FTP_domain


id: CL:4046
description: Mixed, incl. Peptidase M4, and DNA methylation on adenine
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4046_Mixed,_incl._Peptidase_M4,_and_DNA_methylation_on_adenine


id: CL:4057
description: Pregnancy-associated plasma protein-A
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4057_Pregnancy-associated_plasma_protein-A


id: CL:4078
description: Mostly uncharacterized, incl. MarR-type HTH domain, and YceI-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4078_Mostly_uncharacterized,_incl._MarR-type_HTH_domain,_and_YceI-like_domain


id: CL:4079
description: Mixed, incl. YceI-like domain, and Flavodoxin/nitric oxide synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4079_Mixed,_incl._YceI-like_domain,_and_Flavodoxin/nitric_oxide_synthase


id: CL:4082
description: Mixed, incl. YceI-like domain, and Bacterial regulatory proteins, crp family
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4082_Mixed,_incl._YceI-like_domain,_and_Bacterial_regulatory_proteins,_crp_family


id: CL:409
description: Mixed, incl. GTP binding domain, and tRNA wobble uridine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:409_Mixed,_incl._GTP_binding_domain,_and_tRNA_wobble_uridine_modification


id: CL:4100
description: MarR-type HTH domain, and Membrane-bounded organelle
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4100_MarR-type_HTH_domain,_and_Membrane-bounded_organelle


id: CL:4117
description: Mixed, incl. Double-strand break repair, and Redoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4117_Mixed,_incl._Double-strand_break_repair,_and_Redoxin


id: CL:412
description: GTP binding domain, and Repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:412_GTP_binding_domain,_and_Repressor


id: CL:4134
description: Mixed, incl. GNAT domain, and Inositol phosphate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4134_Mixed,_incl._GNAT_domain,_and_Inositol_phosphate_metabolism


id: CL:4137
description: Acetyltransferase (GNAT) family, and Papain-like cysteine peptidase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4137_Acetyltransferase_(GNAT)_family,_and_Papain-like_cysteine_peptidase_superfamily


id: CL:4166
description: Mixed, incl. Peptidase M13, and Outer membrane protein beta-barrel domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4166_Mixed,_incl._Peptidase_M13,_and_Outer_membrane_protein_beta-barrel_domain


id: CL:4168
description: Peptidase M13, and Leucine-rich repeat domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4168_Peptidase_M13,_and_Leucine-rich_repeat_domain_superfamily


id: CL:4182
description: Outer membrane protein beta-barrel domain, and Rhs repeat-associated core
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4182_Outer_membrane_protein_beta-barrel_domain,_and_Rhs_repeat-associated_core


id: CL:4191
description: Mostly uncharacterized, incl. ATPase, AAA-type, core, and Beta-lactamase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4191_Mostly_uncharacterized,_incl._ATPase,_AAA-type,_core,_and_Beta-lactamase_activity


id: CL:4192
description: Mostly uncharacterized, incl. ATPase, AAA-type, core, and Beta-lactamase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4192_Mostly_uncharacterized,_incl._ATPase,_AAA-type,_core,_and_Beta-lactamase_activity


id: CL:4193
description: Mostly uncharacterized, incl. RNA ligase activity, and RNA repair pathway DNA polymerase beta
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4193_Mostly_uncharacterized,_incl._RNA_ligase_activity,_and_RNA_repair_pathway_DNA_polymerase_beta


id: CL:4195
description: Mixed, incl. RNA ligase activity, and RNA repair pathway DNA polymerase beta
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4195_Mixed,_incl._RNA_ligase_activity,_and_RNA_repair_pathway_DNA_polymerase_beta


id: CL:4197
description: RNA repair pathway DNA polymerase beta, and WYL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4197_RNA_repair_pathway_DNA_polymerase_beta,_and_WYL_domain


id: CL:4207
description: Mixed, incl. RNA ligase activity, and RF-1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4207_Mixed,_incl._RNA_ligase_activity,_and_RF-1_domain


id: CL:4223
description: Mixed, incl. Steroid hydroxylase activity, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4223_Mixed,_incl._Steroid_hydroxylase_activity,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:4240
description: Mixed, incl. Beta-lactamase activity, and ATPase, AAA-type, core
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4240_Mixed,_incl._Beta-lactamase_activity,_and_ATPase,_AAA-type,_core


id: CL:4242
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4242_Mixed,_incl._Serine/threonine-specific_protein_phosphatase/bis(5-nucleosyl)-tetraphosphatase,_and_Iron_ion_homeostasis

description:
  Mixed, incl. Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase, and Iron ion homeostasis


id: CL:425
description: Mixed, incl. tRNA wobble uridine modification, and RNA 5-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:425_Mixed,_incl._tRNA_wobble_uridine_modification,_and_RNA_5-end_processing


id: CL:4254
description: Beta-lactamase activity, and Pyridoxal phosphate homeostasis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4254_Beta-lactamase_activity,_and_Pyridoxal_phosphate_homeostasis_protein


id: CL:4266
description: Mostly uncharacterized, incl. HmuY protein, and Di-haem cytochrome c peroxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4266_Mostly_uncharacterized,_incl._HmuY_protein,_and_Di-haem_cytochrome_c_peroxidase


id: CL:4267
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4267_Mixed,_incl._Di-haem_cytochrome_c_peroxidase,_and_Toxin-antitoxin_system,_RelE/ParE_toxin_domain_superfamily

description:
  Mixed, incl. Di-haem cytochrome c peroxidase, and Toxin-antitoxin system, RelE/ParE toxin domain superfamily


id: CL:4269
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4269_Mixed,_incl._Di-c-type_haem_protein,_MauG/cytochrome_c_peroxidase,_and_Iron_coordination_entity_transport

description:
  Mixed, incl. Di-c-type haem protein, MauG/cytochrome c peroxidase, and Iron coordination entity transport


id: CL:4291
description: Mixed, incl. ANK repeat, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4291_Mixed,_incl._ANK_repeat,_and_Sulfur_metabolism


id: CL:4311
description: Mostly uncharacterized, incl. Peptidase M24, and Sialidase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4311_Mostly_uncharacterized,_incl._Peptidase_M24,_and_Sialidase_superfamily


id: CL:4314
description: Mixed, incl. Tetratricopeptide repeat, and NodB homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4314_Mixed,_incl._Tetratricopeptide_repeat,_and_NodB_homology_domain


id: CL:4325
description: Mixed, incl. Peptidase M24, and Sialidase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4325_Mixed,_incl._Peptidase_M24,_and_Sialidase_superfamily


id: CL:4341
description: Mixed, incl. Galactose-binding-like domain superfamily, and Subtilase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4341_Mixed,_incl._Galactose-binding-like_domain_superfamily,_and_Subtilase_family


id: CL:4358
description: Mixed, incl. Amino acid permease, and POT family
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4358_Mixed,_incl._Amino_acid_permease,_and_POT_family


id: CL:4359
description: Mixed, incl. Amino acid permease, and POT family
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4359_Mixed,_incl._Amino_acid_permease,_and_POT_family


id: CL:436
description: Mixed, incl. Spermidine metabolic process, and DHS-like NAD/FAD-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:436_Mixed,_incl._Spermidine_metabolic_process,_and_DHS-like_NAD/FAD-binding_domain_superfamily


id: CL:4360
description: Amino acid permease, and Glucan metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4360_Amino_acid_permease,_and_Glucan_metabolic_process


id: CL:4371
description: POT family, and Thioredoxin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4371_POT_family,_and_Thioredoxin-like


id: CL:4383
description: Mixed, incl. Peptidase S9A, N-terminal domain, and EamA-like transporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4383_Mixed,_incl._Peptidase_S9A,_N-terminal_domain,_and_EamA-like_transporter_family


id: CL:4393
description: Mostly uncharacterized, incl. Nitroreductase, and Acetyltransferase (GNAT) family
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4393_Mostly_uncharacterized,_incl._Nitroreductase,_and_Acetyltransferase_(GNAT)_family


id: CL:4394
description: Mixed, incl. Nitroreductase, and Propanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4394_Mixed,_incl._Nitroreductase,_and_Propanoate_metabolism


id: CL:4396
description: Mixed, incl. OsmC/Ohr family, and DNA-binding HTH domain, TetR-type, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4396_Mixed,_incl._OsmC/Ohr_family,_and_DNA-binding_HTH_domain,_TetR-type,_conserved_site


id: CL:4416
description: Mixed, incl. MGS-like domain, and rRNA (adenine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4416_Mixed,_incl._MGS-like_domain,_and_rRNA_(adenine)_methyltransferase_activity


id: CL:4425
description: Mixed, incl. Acetyltransferase (GNAT) family, and Clp, repeat (R) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4425_Mixed,_incl._Acetyltransferase_(GNAT)_family,_and_Clp,_repeat_(R)_domain


id: CL:4427
description: Mixed, incl. Clp, repeat (R) domain, and ATP-grasp fold, subdomain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4427_Mixed,_incl._Clp,_repeat_(R)_domain,_and_ATP-grasp_fold,_subdomain_1


id: CL:4446
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4446_Mostly_uncharacterized,_incl._Cytosolic_acyl_coenzyme_A_thioester_hydrolase,_and_Calcium_ion_binding

description:
  Mostly uncharacterized, incl. Cytosolic acyl coenzyme A thioester hydrolase, and Calcium ion binding


id: CL:4447
description: Mostly uncharacterized, incl. Bacterial SH3 domain, and Arm, DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4447_Mostly_uncharacterized,_incl._Bacterial_SH3_domain,_and_Arm,_DNA-binding_domain


id: CL:4448
description: Mostly uncharacterized, incl. Arm, DNA-binding domain, and Carbohydrate phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4448_Mostly_uncharacterized,_incl._Arm,_DNA-binding_domain,_and_Carbohydrate_phosphorylation


id: CL:4450
description: Mixed, incl. Arm, DNA-binding domain, and Carbohydrate phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4450_Mixed,_incl._Arm,_DNA-binding_domain,_and_Carbohydrate_phosphorylation


id: CL:4470
description: Mixed, incl. Bacterial SH3 domain, and Putative membrane protein insertion efficiency factor
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4470_Mixed,_incl._Bacterial_SH3_domain,_and_Putative_membrane_protein_insertion_efficiency_factor


id: CL:4487
description: Mixed, incl. Cytosolic acyl coenzyme A thioester hydrolase, and Calcium ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4487_Mixed,_incl._Cytosolic_acyl_coenzyme_A_thioester_hydrolase,_and_Calcium_ion_binding


id: CL:4489
description: Mixed, incl. Calcium ion binding, and Redoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4489_Mixed,_incl._Calcium_ion_binding,_and_Redoxin


id: CL:451
description: Mixed, incl. Homologous recombination, and DNA damage
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:451_Mixed,_incl._Homologous_recombination,_and_DNA_damage


id: CL:4511
description: Mixed, incl. Enterobacterial common antigen metabolic process, and DinB-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4511_Mixed,_incl._Enterobacterial_common_antigen_metabolic_process,_and_DinB-like_domain


id: CL:4512
description: Mixed, incl. DinB-like domain, and Cold shock, CspA
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4512_Mixed,_incl._DinB-like_domain,_and_Cold_shock,_CspA


id: CL:452
description: Mixed, incl. Homologous recombination, and DNA damage
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:452_Mixed,_incl._Homologous_recombination,_and_DNA_damage


id: CL:4527
description: Enterobacterial common antigen metabolic process, and PKD domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4527_Enterobacterial_common_antigen_metabolic_process,_and_PKD_domain_superfamily


id: CL:453
description: Mixed, incl. Homologous recombination, and Nucleotide excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:453_Mixed,_incl._Homologous_recombination,_and_Nucleotide_excision_repair


id: CL:4536
description: Mixed, incl. DNA restriction-modification system, and Intracellular signal transduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4536_Mixed,_incl._DNA_restriction-modification_system,_and_Intracellular_signal_transduction


id: CL:4537
description: Mixed, incl. DNA methylation on cytosine, and YhcG, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4537_Mixed,_incl._DNA_methylation_on_cytosine,_and_YhcG,_N-terminal


id: CL:4538
description: Mixed, incl. YhcG, N-terminal, and Pyridoxal phosphate homeostasis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4538_Mixed,_incl._YhcG,_N-terminal,_and_Pyridoxal_phosphate_homeostasis_protein


id: CL:455
description: Homologous recombination, and Replisome
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:455_Homologous_recombination,_and_Replisome


id: CL:4551
description: Mixed, incl. DNA methylation on cytosine, and Thylakoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4551_Mixed,_incl._DNA_methylation_on_cytosine,_and_Thylakoid


id: CL:456
description: Homologous recombination, and Replisome
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:456_Homologous_recombination,_and_Replisome


id: CL:4564
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4564_Mostly_uncharacterized,_incl._Phage_integrase,_N-terminal_SAM-like_domain,_and_Helix_turn_helix,_Lux_Regulon

description:
  Mostly uncharacterized, incl. Phage integrase, N-terminal SAM-like domain, and Helix_turn_helix, Lux Regulon


id: CL:4565
description: Mostly uncharacterized, incl. Phage integrase, N-terminal SAM-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4565_Mostly_uncharacterized,_incl._Phage_integrase,_N-terminal_SAM-like_domain


id: CL:457
description: DNA replication, and RecQ zinc-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:457_DNA_replication,_and_RecQ_zinc-binding


id: CL:4577
description: Mixed, incl. Helix_turn_helix, Lux Regulon
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4577_Mixed,_incl._Helix_turn_helix,_Lux_Regulon


id: CL:458
description: Mixed, incl. RecQ zinc-binding, and RNA-DNA hybrid ribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:458_Mixed,_incl._RecQ_zinc-binding,_and_RNA-DNA_hybrid_ribonuclease_activity


id: CL:4587
description: Mixed, incl. AsnC-type HTH domain, and Acyltransferase 3 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4587_Mixed,_incl._AsnC-type_HTH_domain,_and_Acyltransferase_3_domain


id: CL:4588
description: AsnC-type HTH domain, and Metallocarboxypeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4588_AsnC-type_HTH_domain,_and_Metallocarboxypeptidase_activity


id: CL:4599
description: Acyltransferase 3 domain, and LSM domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4599_Acyltransferase_3_domain,_and_LSM_domain_superfamily


id: CL:461
description: Nucleotide excision repair, and RecQ zinc-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:461_Nucleotide_excision_repair,_and_RecQ_zinc-binding


id: CL:4612
description: Mostly uncharacterized, incl. Extracellular region, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4612_Mostly_uncharacterized,_incl._Extracellular_region,_and_DNA_integration


id: CL:4613
description: Mixed, incl. Extracellular region, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4613_Mixed,_incl._Extracellular_region,_and_DNA_integration


id: CL:4614
description: Mixed, incl. Extracellular region, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4614_Mixed,_incl._Extracellular_region,_and_DNA_integration


id: CL:4615
description: Mixed, incl. Extracellular region, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4615_Mixed,_incl._Extracellular_region,_and_DNA_integration


id: CL:4617
description: Mixed, incl. Extracellular region, and Hemolysin coregulated protein (Hcp) TssD
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4617_Mixed,_incl._Extracellular_region,_and_Hemolysin_coregulated_protein_(Hcp)_TssD


id: CL:4618
description: Mixed, incl. Extracellular region, and Hemolysin coregulated protein (Hcp) TssD
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4618_Mixed,_incl._Extracellular_region,_and_Hemolysin_coregulated_protein_(Hcp)_TssD


id: CL:4621
description: Mixed, incl. Vgr protein, OB-fold domain superfamily, and Hemolysin coregulated protein (Hcp) TssD
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4621_Mixed,_incl._Vgr_protein,_OB-fold_domain_superfamily,_and_Hemolysin_coregulated_protein_(Hcp)_TssD


id: CL:4623
description: Mixed, incl. Vgr protein, OB-fold domain superfamily, and Hemolysin coregulated protein (Hcp) TssD
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4623_Mixed,_incl._Vgr_protein,_OB-fold_domain_superfamily,_and_Hemolysin_coregulated_protein_(Hcp)_TssD


id: CL:4626
description: Mixed, incl. Hemolysin coregulated protein (Hcp) TssD, and Vgr protein, OB-fold domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4626_Mixed,_incl._Hemolysin_coregulated_protein_(Hcp)_TssD,_and_Vgr_protein,_OB-fold_domain_superfamily


id: CL:4628
description: Mixed, incl. Protein secretion, and PKD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4628_Mixed,_incl._Protein_secretion,_and_PKD_domain


id: CL:4687
description: Mixed, incl. Protein of unknown function DUF2931, and Porin activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4687_Mixed,_incl._Protein_of_unknown_function_DUF2931,_and_Porin_activity


id: CL:4690
description: Mixed, incl. Porin activity, and LysM domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4690_Mixed,_incl._Porin_activity,_and_LysM_domain_superfamily


id: CL:4693
description: Mixed, incl. Outer membrane protein, bacterial, and Protein of unknown function DUF4280
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4693_Mixed,_incl._Outer_membrane_protein,_bacterial,_and_Protein_of_unknown_function_DUF4280


id: CL:4715
description: Protein of unknown function DUF2931, and Domain of unknown function DUF2235
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4715_Protein_of_unknown_function_DUF2931,_and_Domain_of_unknown_function_DUF2235


id: CL:4731
description: Mostly uncharacterized, incl. Protein secretion, and MORN variant
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4731_Mostly_uncharacterized,_incl._Protein_secretion,_and_MORN_variant


id: CL:4732
description: Mixed, incl. Protein secretion, and MORN variant
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4732_Mixed,_incl._Protein_secretion,_and_MORN_variant


id: CL:4734
description: Mixed, incl. Protein secretion, and MORN variant
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4734_Mixed,_incl._Protein_secretion,_and_MORN_variant


id: CL:4735
description: Protein secretion, and Fibronectin type III
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4735_Protein_secretion,_and_Fibronectin_type_III


id: CL:4744
description: Mixed, incl. MORN variant, and Rhs repeat-associated core
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4744_Mixed,_incl._MORN_variant,_and_Rhs_repeat-associated_core


id: CL:4756
description: Mixed, incl. Chaperone protein Skp, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4756_Mixed,_incl._Chaperone_protein_Skp,_and_Signal


id: CL:4768
description: Mixed, incl. Winged helix-turn helix, and Hydrolase activity, hydrolyzing O-glycosyl compounds
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4768_Mixed,_incl._Winged_helix-turn_helix,_and_Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds


id: CL:4784
description: Mostly uncharacterized, incl. Diphthamide synthase, and Lipoprotein metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4784_Mostly_uncharacterized,_incl._Diphthamide_synthase,_and_Lipoprotein_metabolic_process


id: CL:4786
description: Mixed, incl. Diphthamide synthase, and Lipoprotein metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4786_Mixed,_incl._Diphthamide_synthase,_and_Lipoprotein_metabolic_process


id: CL:4806
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4806_Mixed,_incl._Inorganic_diphosphatase_activity,_and_Carboxypeptidase-like,_regulatory_domain_superfamily

description:
  Mixed, incl. Inorganic diphosphatase activity, and Carboxypeptidase-like, regulatory domain superfamily


id: CL:4822
description: Mixed, incl. Methyltransferase domain, and SNF2, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4822_Mixed,_incl._Methyltransferase_domain,_and_SNF2,_N-terminal


id: CL:4823
description: Mixed, incl. Methyltransferase domain, and SNF2, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4823_Mixed,_incl._Methyltransferase_domain,_and_SNF2,_N-terminal


id: CL:4836
description: Mixed, incl. YqgF/RNase H-like domain, and Tetratricopeptide-like helical domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4836_Mixed,_incl._YqgF/RNase_H-like_domain,_and_Tetratricopeptide-like_helical_domain_superfamily


id: CL:4848
description: Mixed, incl. DNA recombination, and DNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4848_Mixed,_incl._DNA_recombination,_and_DNA_modification


id: CL:4849
description: Mixed, incl. DNA recombination, and DNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4849_Mixed,_incl._DNA_recombination,_and_DNA_modification


id: CL:4850
description: Mixed, incl. Transposition, and DNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4850_Mixed,_incl._Transposition,_and_DNA_modification


id: CL:4851
description: Mixed, incl. DDE transposase sub-family, and DNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4851_Mixed,_incl._DDE_transposase_sub-family,_and_DNA_modification


id: CL:4853
description: Mixed, incl. DDE transposase sub-family, and Transposase, mutator type
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4853_Mixed,_incl._DDE_transposase_sub-family,_and_Transposase,_mutator_type


id: CL:4855
description: DDE transposase sub-family, and Cell wall
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4855_DDE_transposase_sub-family,_and_Cell_wall


id: CL:4881
description: Mixed, incl. Bacterial transcription activator, effector binding, and Transposase domain (DUF772)
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4881_Mixed,_incl._Bacterial_transcription_activator,_effector_binding,_and_Transposase_domain_(DUF772)


id: CL:4894
description: DNA modification, and Helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4894_DNA_modification,_and_Helix-turn-helix_domain


id: CL:4896
description: Helix-turn-helix domain, and Phage integrase SAM-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4896_Helix-turn-helix_domain,_and_Phage_integrase_SAM-like_domain


id: CL:4921
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4921_Mostly_uncharacterized,_incl._Nucleotidyl_transferase_AbiEii_toxin,_Type_IV_TA_system,_and_Fido_domain

description:
  Mostly uncharacterized, incl. Nucleotidyl transferase AbiEii toxin, Type IV TA system, and Fido domain


id: CL:4923
description: Mixed, incl. Fido domain, and Nucleotidyl transferase AbiEii toxin, Type IV TA system
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4923_Mixed,_incl._Fido_domain,_and_Nucleotidyl_transferase_AbiEii_toxin,_Type_IV_TA_system


id: CL:4943
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4943_Mixed,_incl._Nucleotidyl_transferase_AbiEii_toxin,_Type_IV_TA_system,_and_Transposase_domain_(DUF772)

description:
  Mixed, incl. Nucleotidyl transferase AbiEii toxin, Type IV TA system, and Transposase domain (DUF772)


id: CL:4958
description: Mixed, incl. Core-binding (CB) domain, and Maintenance of DNA repeat elements
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4958_Mixed,_incl._Core-binding_(CB)_domain,_and_Maintenance_of_DNA_repeat_elements


id: CL:4959
description: Mixed, incl. Core-binding (CB) domain, and Hydrolase activity, hydrolyzing O-glycosyl compounds
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4959_Mixed,_incl._Core-binding_(CB)_domain,_and_Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds


id: CL:4962
description: Mixed, incl. Core-binding (CB) domain, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4962_Mixed,_incl._Core-binding_(CB)_domain,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:4979
description: Mixed, incl. WYL domain, and RutC-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4979_Mixed,_incl._WYL_domain,_and_RutC-like_superfamily


id: CL:499
description: Primosome, and Bacterial nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:499_Primosome,_and_Bacterial_nucleoid


id: CL:4992
description: Maintenance of DNA repeat elements, and Integrase, SAM-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:4992_Maintenance_of_DNA_repeat_elements,_and_Integrase,_SAM-like,_N-terminal


id: CL:5006
description: Mixed, incl. Transposase IS200-like superfamily, and LexA/Signal peptidase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:5006_Mixed,_incl._Transposase_IS200-like_superfamily,_and_LexA/Signal_peptidase-like_superfamily


id: CL:5009
description: Mixed, incl. Protein transport across the cell outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:5009_Mixed,_incl._Protein_transport_across_the_cell_outer_membrane


id: CL:5032
description: Mixed, incl. Transposition, DNA-mediated, and Cytolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:5032_Mixed,_incl._Transposition,_DNA-mediated,_and_Cytolysis


id: CL:5033
description: Mixed, incl. Transposition, DNA-mediated, and Cytolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:5033_Mixed,_incl._Transposition,_DNA-mediated,_and_Cytolysis


id: CL:5034
description: Mixed, incl. Transposase, IS4-like, and Transposition, DNA-mediated
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:5034_Mixed,_incl._Transposase,_IS4-like,_and_Transposition,_DNA-mediated


id: CL:5036
description: DDE transposase sub-family, and Transposition, DNA-mediated
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:5036_DDE_transposase_sub-family,_and_Transposition,_DNA-mediated


id: CL:5052
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:5052_Mixed,_incl._Carotenoid_biosynthetic_process,_and_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity

description:
  Mixed, incl. Carotenoid biosynthetic process, and DNA-(apurinic or apyrimidinic site) endonuclease activity


id: CL:5062
description: Mixed, incl. Cytolysis, and Protein of unknown function DUF4280
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:5062_Mixed,_incl._Cytolysis,_and_Protein_of_unknown_function_DUF4280


id: CL:5076
description: Mixed, incl. Deaminase activity, and Cytolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:5076_Mixed,_incl._Deaminase_activity,_and_Cytolysis


id: CL:5078
description: Mixed, incl. Deaminase activity, and DNA alkylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:5078_Mixed,_incl._Deaminase_activity,_and_DNA_alkylation


id: CL:5102
description: Mostly uncharacterized, incl. Peptidase S49, and Peptidase M15C
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:5102_Mostly_uncharacterized,_incl._Peptidase_S49,_and_Peptidase_M15C


id: CL:5103
description: Mostly uncharacterized, incl. Peptidase M15C, and SNF2, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:5103_Mostly_uncharacterized,_incl._Peptidase_M15C,_and_SNF2,_N-terminal


id: CL:5104
description: Mostly uncharacterized, incl. Peptidase M15C, and SNF2, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:5104_Mostly_uncharacterized,_incl._Peptidase_M15C,_and_SNF2,_N-terminal


id: CL:5105
description: Mostly uncharacterized, incl. Peptidase M15C, and Aminopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:5105_Mostly_uncharacterized,_incl._Peptidase_M15C,_and_Aminopeptidase_activity


id: CL:5106
description: Mixed, incl. Peptidase M15C, and Aminopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:5106_Mixed,_incl._Peptidase_M15C,_and_Aminopeptidase_activity


id: CL:5117
description: Mixed, incl. P-loop containing nucleoside triphosphate hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:5117_Mixed,_incl._P-loop_containing_nucleoside_triphosphate_hydrolase


id: CL:5127
description: Mixed, incl. SNF2, N-terminal, and ParB/Sulfiredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:5127_Mixed,_incl._SNF2,_N-terminal,_and_ParB/Sulfiredoxin


id: CL:5153
description: Mixed, incl. Peptidase S49, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:5153_Mixed,_incl._Peptidase_S49,_and_Coiled_coil


id: CL:517
description: Single-stranded DNA-binding protein, and DHH family
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:517_Single-stranded_DNA-binding_protein,_and_DHH_family


id: CL:5172
description: Integrase, catalytic core, and Helix-turn-helix of insertion element transposase
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:5172_Integrase,_catalytic_core,_and_Helix-turn-helix_of_insertion_element_transposase


id: CL:5174
description: Mixed, incl. Integrase, catalytic core, and Transposase, mutator type
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:5174_Mixed,_incl._Integrase,_catalytic_core,_and_Transposase,_mutator_type


id: CL:536
description: Mismatch repair, and Rhomboid family
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:536_Mismatch_repair,_and_Rhomboid_family


id: CL:549
description: Base excision repair, and Biotin/lipoate A/B protein ligase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:549_Base_excision_repair,_and_Biotin/lipoate_A/B_protein_ligase_family


id: CL:565
description: Mixed, incl. TRAM domain, and tRNA methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:565_Mixed,_incl._TRAM_domain,_and_tRNA_methyltransferase_activity


id: CL:567
description: Mixed, incl. charged-tRNA amino acid modification, and tRNA (adenine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:567_Mixed,_incl._charged-tRNA_amino_acid_modification,_and_tRNA_(adenine)_methyltransferase_activity


id: CL:587
description: Cell cycle, and Regulation of cell shape
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:587_Cell_cycle,_and_Regulation_of_cell_shape


id: CL:588
description: Regulation of cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:588_Regulation_of_cell_shape,_and_Cell_division_site


id: CL:590
description: Cell cycle, and D-Alanine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:590_Cell_cycle,_and_D-Alanine_metabolism


id: CL:592
description: Cell cycle, and D-Alanine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:592_Cell_cycle,_and_D-Alanine_metabolism


id: CL:595
description: Mur ligase, C-terminal, and Vancomycin resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:595_Mur_ligase,_C-terminal,_and_Vancomycin_resistance


id: CL:62
description: Mixed, incl. Translation, and ATP-dependent activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:62_Mixed,_incl._Translation,_and_ATP-dependent_activity


id: CL:63
description: Mixed, incl. Translation, and ATP-dependent activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:63_Mixed,_incl._Translation,_and_ATP-dependent_activity


id: CL:635
description: Mixed, incl. Cell gliding, and Peptidase M23
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:635_Mixed,_incl._Cell_gliding,_and_Peptidase_M23


id: CL:64
description: Translation, and ATP-dependent activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:64_Translation,_and_ATP-dependent_activity


id: CL:650
description: Mixed, incl. Cellular amino acid biosynthetic process, and Nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:650_Mixed,_incl._Cellular_amino_acid_biosynthetic_process,_and_Nucleotide_biosynthetic_process


id: CL:651
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:651_Mixed,_incl._Cellular_amino_acid_biosynthetic_process,_and_Nucleoside_monophosphate_metabolic_process

description:
  Mixed, incl. Cellular amino acid biosynthetic process, and Nucleoside monophosphate metabolic process


id: CL:652
description: Mixed, incl. Nucleoside monophosphate metabolic process, and Folate biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:652_Mixed,_incl._Nucleoside_monophosphate_metabolic_process,_and_Folate_biosynthesis


id: CL:654
description: Ribonucleoside monophosphate metabolic process, and Pyrimidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:654_Ribonucleoside_monophosphate_metabolic_process,_and_Pyrimidine_metabolism


id: CL:655
description: Ribonucleoside monophosphate biosynthetic process, and Glycine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:655_Ribonucleoside_monophosphate_biosynthetic_process,_and_Glycine_metabolic_process


id: CL:656
description: IMP metabolic process, and Glycine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:656_IMP_metabolic_process,_and_Glycine_metabolic_process


id: CL:66
description: Translation, and ATP-dependent activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:66_Translation,_and_ATP-dependent_activity


id: CL:68
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:68_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:682
description: Glycine catabolic process, and Tetrahydrofolate interconversion
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:682_Glycine_catabolic_process,_and_Tetrahydrofolate_interconversion


id: CL:69
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:69_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:693
description: UMP biosynthetic process, and Uracil phosphoribosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:693_UMP_biosynthetic_process,_and_Uracil_phosphoribosyltransferase_activity


id: CL:695
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:695_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity,_and_Metal-dependent_hydrolase,_composite_domain_superfamily

description:
  Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity, and Metal-dependent hydrolase, composite domain superfamily


id: CL:707
description: Uracil phosphoribosyltransferase activity, and UMP salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:707_Uracil_phosphoribosyltransferase_activity,_and_UMP_salvage


id: CL:71
description: Ribosome, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:71_Ribosome,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:716
description: Purine metabolism, and APOBEC/CMP deaminase, zinc-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:716_Purine_metabolism,_and_APOBEC/CMP_deaminase,_zinc-binding


id: CL:717
description: Purine metabolism, and ANK repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:717_Purine_metabolism,_and_ANK_repeat


id: CL:719
description: GMP biosynthesis, and Ribonucleotide catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:719_GMP_biosynthesis,_and_Ribonucleotide_catabolic_process


id: CL:73
description: Ribosome, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:73_Ribosome,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:74
description: Ribosome, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:74_Ribosome,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:742
description: Phosphorylase superfamily, and APOBEC/CMP deaminase, zinc-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:742_Phosphorylase_superfamily,_and_APOBEC/CMP_deaminase,_zinc-binding


id: CL:75
description: Ribosome, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:75_Ribosome,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:760
description: Folate biosynthesis, and Riboflavin metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:760_Folate_biosynthesis,_and_Riboflavin_metabolism


id: CL:761
description: Riboflavin metabolism, and Vitamin B6 metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:761_Riboflavin_metabolism,_and_Vitamin_B6_metabolism


id: CL:77
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:77_Ribosome,_and_Translation_regulator_activity


id: CL:786
description: 6-pyruvoyl tetrahydropterin synthase, and Cell adhesion
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:786_6-pyruvoyl_tetrahydropterin_synthase,_and_Cell_adhesion


id: CL:795
description: Cellular amino acid biosynthetic process, and Cysteine and methionine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:795_Cellular_amino_acid_biosynthetic_process,_and_Cysteine_and_methionine_metabolism


id: CL:797
description: Cysteine and methionine metabolism, and Lysine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:797_Cysteine_and_methionine_metabolism,_and_Lysine_biosynthetic_process


id: CL:798
description: Lysine biosynthetic process, and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:798_Lysine_biosynthetic_process,_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:80
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:80_Ribosome,_and_Translation_regulator_activity


id: CL:823
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:823_Sulfur_amino_acid_metabolic_process,_and_D-isomer_specific_2-hydroxyacid_dehydrogenase,_catalytic_domain

description:
  Sulfur amino acid metabolic process, and D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain


id: CL:825
description: Sulfur amino acid metabolic process, and Pyridoxal-phosphate dependent enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:825_Sulfur_amino_acid_metabolic_process,_and_Pyridoxal-phosphate_dependent_enzyme


id: CL:846
description: Phenylalanine, tyrosine and tryptophan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:846_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis


id: CL:863
description: Tryptophan biosynthesis, and Anthranilate synthase component I-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:863_Tryptophan_biosynthesis,_and_Anthranilate_synthase_component_I-like


id: CL:877
description: Glutamine family amino acid biosynthetic process, and Diaminopimelate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:877_Glutamine_family_amino_acid_biosynthetic_process,_and_Diaminopimelate_biosynthetic_process


id: CL:880
description: Arginine biosynthetic process, and Diaminopimelate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:880_Arginine_biosynthetic_process,_and_Diaminopimelate_biosynthetic_process


id: CL:883
description: Ornithine metabolic process, and Arginine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:883_Ornithine_metabolic_process,_and_Arginine_biosynthesis


id: CL:910
description: Pyridine nucleotide metabolic process, and NAD+ binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:910_Pyridine_nucleotide_metabolic_process,_and_NAD+_binding


id: CL:912
description: Nicotinate and nicotinamide metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:912_Nicotinate_and_nicotinamide_metabolism


id: CL:935
description: Mixed, incl. Carbon metabolism, and Electron transport chain
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:935_Mixed,_incl._Carbon_metabolism,_and_Electron_transport_chain


id: CL:937
description: Carbon metabolism, and acyl-CoA dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:937_Carbon_metabolism,_and_acyl-CoA_dehydrogenase_activity


id: CL:939
description: Citrate cycle (TCA cycle), and Dehydrogenase E1 component
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:939_Citrate_cycle_(TCA_cycle),_and_Dehydrogenase_E1_component


id: CL:94
description: Small ribosomal subunit, and rRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:94_Small_ribosomal_subunit,_and_rRNA-binding


id: CL:942
description: acetyl-CoA biosynthetic process from pyruvate, and Dehydrogenase E1 component
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:942_acetyl-CoA_biosynthetic_process_from_pyruvate,_and_Dehydrogenase_E1_component


id: CL:96
description: Small ribosomal subunit, and rRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:96_Small_ribosomal_subunit,_and_rRNA-binding


id: CL:960
description: CoA-ligase, and Butanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:960_CoA-ligase,_and_Butanoate_metabolism


id: CL:970
description: Malate dehydrogenase activity, and Aminotransferases, class-I, pyridoxal-phosphate-binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:970_Malate_dehydrogenase_activity,_and_Aminotransferases,_class-I,_pyridoxal-phosphate-binding_site


id: CL:988
description: Pentose phosphate pathway, and Glucose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:988_Pentose_phosphate_pathway,_and_Glucose_metabolic_process


id: CL:990
description: Glycolysis, and Glyceraldehyde/Erythrose phosphate dehydrogenase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:990_Glycolysis,_and_Glyceraldehyde/Erythrose_phosphate_dehydrogenase_family


id: CL:992
description: Glyceraldehyde/Erythrose phosphate dehydrogenase family, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1041826_STRINGid_CL:992_Glyceraldehyde/Erythrose_phosphate_dehydrogenase_family,_and_Glycolysis


id: GO:0000394
description: RNA splicing, via endonucleolytic cleavage and ligation
memo: https://amigo.geneontology.org/amigo/term/GO:0000394
golevel: 9
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0000394_RNA_splicing,_via_endonucleolytic_cleavage_and_ligation


id: GO:0000701
description: Purine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0000701
golevel: 7
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0000701_Purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 10
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0003864
description: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003864
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0003864_3-methyl-2-oxobutanoate_hydroxymethyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 6
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0004015
description: adenosylmethionine-8-amino-7-oxononanoate transaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004015
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0004015_adenosylmethionine-8-amino-7-oxononanoate_transaminase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004149
description: Dihydrolipoyllysine-residue succinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004149
golevel: 7
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0004149_Dihydrolipoyllysine-residue_succinyltransferase_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
golevel: 6
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004318
description: Enoyl-[acyl-carrier-protein] reductase (NADH) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004318
golevel: 6
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0004318_Enoyl-[acyl-carrier-protein]_reductase_(NADH)_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004471
description: Malate dehydrogenase (decarboxylating) (NAD+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004471
golevel: 6
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0004471_Malate_dehydrogenase_(decarboxylating)_(NAD+)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 6
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004489
description: Methylenetetrahydrofolate reductase (NAD(P)H) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004489
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0004489_Methylenetetrahydrofolate_reductase_(NAD(P)H)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004582
description: Dolichyl-phosphate beta-D-mannosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004582
golevel: 6
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0004582_Dolichyl-phosphate_beta-D-mannosyltransferase_activity


id: GO:0004591
description: Oxoglutarate dehydrogenase (succinyl-transferring) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004591
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0004591_Oxoglutarate_dehydrogenase_(succinyl-transferring)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004648
description: O-phospho-L-serine:2-oxoglutarate aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004648
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0004648_O-phospho-L-serine:2-oxoglutarate_aminotransferase_activity


id: GO:0004719
description: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004719
golevel: 8
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0004719_protein-L-isoaspartate_(D-aspartate)_O-methyltransferase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0005315
description: Inorganic phosphate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005315
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0005315_Inorganic_phosphate_transmembrane_transporter_activity


id: GO:0006388
description: tRNA splicing, via endonucleolytic cleavage and ligation
memo: https://amigo.geneontology.org/amigo/term/GO:0006388
golevel: 10
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0006388_tRNA_splicing,_via_endonucleolytic_cleavage_and_ligation


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 11
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0007156
description: Homophilic cell adhesion via plasma membrane adhesion molecules
memo: https://amigo.geneontology.org/amigo/term/GO:0007156
golevel: 5
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0007156_Homophilic_cell_adhesion_via_plasma_membrane_adhesion_molecules


id: GO:0008028
description: Monocarboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008028
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0008028_Monocarboxylic_acid_transmembrane_transporter_activity


id: GO:0008271
description: Secondary active sulfate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008271
golevel: 6
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0008271_Secondary_active_sulfate_transmembrane_transporter_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008686
description: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008686
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0008686_3,4-dihydroxy-2-butanone-4-phosphate_synthase_activity


id: GO:0008690
description: 3-deoxy-manno-octulosonate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008690
golevel: 6
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0008690_3-deoxy-manno-octulosonate_cytidylyltransferase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
golevel: 6
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008759
description: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008759
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0008759_UDP-3-O-[3-hydroxymyristoyl]_N-acetylglucosamine_deacetylase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008780
description: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008780
golevel: 6
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0008780_acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine_O-acyltransferase_activity


id: GO:0008817
description: cob(I)yrinic acid a,c-diamide adenosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008817
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0008817_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008939
description: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008939
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0008939_Nicotinate-nucleotide-dimethylbenzimidazole_phosphoribosyltransferase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 6
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 9
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 9
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 9
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009157
description: Deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009157
golevel: 9
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0009157_Deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 10
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 9
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 10
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009175
description: Pyrimidine ribonucleoside monophosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009175
golevel: 10
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0009175_Pyrimidine_ribonucleoside_monophosphate_catabolic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 9
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 10
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 10
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 9
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 10
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009210
description: Pyrimidine ribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009210
golevel: 10
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0009210_Pyrimidine_ribonucleoside_triphosphate_catabolic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 9
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 10
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 10
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 9
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 10
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 6
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 6
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 6
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0010604
description: Positive regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010604
golevel: 5
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0010604_Positive_regulation_of_macromolecule_metabolic_process


id: GO:0010605
description: Negative regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010605
golevel: 5
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0010605_Negative_regulation_of_macromolecule_metabolic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
golevel: 3
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015932
description: Nucleobase-containing compound transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015932
golevel: 3
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0015932_Nucleobase-containing_compound_transmembrane_transporter_activity


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016624
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016624
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016624_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_disulfide_as_acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016641
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016641
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016641_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_oxygen_as_acceptor


id: GO:0016642
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016642
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016642_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_disulfide_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016653
description: Oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016653
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016653_Oxidoreductase_activity,_acting_on_NAD(P)H,_heme_protein_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016662
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016662
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016662_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors,_cytochrome_as_acceptor


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016675
description: Oxidoreductase activity, acting on a heme group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016675
golevel: 3
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016675_Oxidoreductase_activity,_acting_on_a_heme_group_of_donors


id: GO:0016679
description: Oxidoreductase activity, acting on diphenols and related substances as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016679
golevel: 3
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016679_Oxidoreductase_activity,_acting_on_diphenols_and_related_substances_as_donors


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016702
memo: https://amigo.geneontology.org/amigo/term/GO:0016702
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016702_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen


id: GO:0016703
memo: https://amigo.geneontology.org/amigo/term/GO:0016703
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016703_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_one_atom_of_oxygen_(internal_monooxygenases_or_internal_mixed_function_oxidases)

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)


id: GO:0016705
memo: https://amigo.geneontology.org/amigo/term/GO:0016705
golevel: 3
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016705_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: GO:0016709
memo: https://amigo.geneontology.org/amigo/term/GO:0016709
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016709_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen


id: GO:0016714
memo: https://amigo.geneontology.org/amigo/term/GO:0016714
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016714_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_reduced_pteridine_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced pteridine as one donor, and incorporation of one atom of oxygen


id: GO:0016716
memo: https://amigo.geneontology.org/amigo/term/GO:0016716
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016716_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_another_compound_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen


id: GO:0016717
memo: https://amigo.geneontology.org/amigo/term/GO:0016717
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016717_Oxidoreductase_activity,_acting_on_paired_donors,_with_oxidation_of_a_pair_of_donors_resulting_in_the_reduction_of_molecular_oxygen_to_two_molecules_of_water

description:
  Oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water


id: GO:0016721
description: Oxidoreductase activity, acting on superoxide radicals as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016721
golevel: 3
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016721_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016730
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016730
golevel: 3
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016730_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: GO:0016731
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016731
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016731_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_NAD_or_NADP_as_acceptor


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016773
description: Phosphotransferase activity, alcohol group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016773
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016773_Phosphotransferase_activity,_alcohol_group_as_acceptor


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
golevel: 6
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016822
description: Hydrolase activity, acting on acid carbon-carbon bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016822
golevel: 3
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016822_Hydrolase_activity,_acting_on_acid_carbon-carbon_bonds


id: GO:0016823
description: Hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances
memo: https://amigo.geneontology.org/amigo/term/GO:0016823
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016823_Hydrolase_activity,_acting_on_acid_carbon-carbon_bonds,_in_ketonic_substances


id: GO:0016837
description: Carbon-oxygen lyase activity, acting on polysaccharides
memo: https://amigo.geneontology.org/amigo/term/GO:0016837
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016837_Carbon-oxygen_lyase_activity,_acting_on_polysaccharides


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016863
description: Intramolecular oxidoreductase activity, transposing C=C bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016863
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016863_Intramolecular_oxidoreductase_activity,_transposing_C=C_bonds


id: GO:0016867
description: Intramolecular transferase activity, transferring acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016867
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016867_Intramolecular_transferase_activity,_transferring_acyl_groups


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016869
description: Intramolecular transferase activity, transferring amino groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016869
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016869_Intramolecular_transferase_activity,_transferring_amino_groups


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016888
description: Endodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016888
golevel: 7
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016888_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016889
description: Endodeoxyribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016889
golevel: 7
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016889_Endodeoxyribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 7
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
golevel: 6
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016894
memo: https://amigo.geneontology.org/amigo/term/GO:0016894
golevel: 6
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016894_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_3-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 7
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016896
description: Exoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016896
golevel: 7
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016896_Exoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016901
memo: https://amigo.geneontology.org/amigo/term/GO:0016901
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016901_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0017183
description: Peptidyl-diphthamide biosynthetic process from peptidyl-histidine
memo: https://amigo.geneontology.org/amigo/term/GO:0017183
golevel: 11
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0017183_Peptidyl-diphthamide_biosynthetic_process_from_peptidyl-histidine


id: GO:0018339
description: peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid
memo: https://amigo.geneontology.org/amigo/term/GO:0018339
golevel: 8
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0018339_peptidyl-L-beta-methylthioaspartic_acid_biosynthetic_process_from_peptidyl-aspartic_acid


id: GO:0019171
description: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019171
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0019171_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 5
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019243
description: Methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
memo: https://amigo.geneontology.org/amigo/term/GO:0019243
golevel: 9
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0019243_Methylglyoxal_catabolic_process_to_D-lactate_via_S-lactoyl-glutathione


id: GO:0019287
description: Isopentenyl diphosphate biosynthetic process, mevalonate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019287
golevel: 12
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0019287_Isopentenyl_diphosphate_biosynthetic_process,_mevalonate_pathway


id: GO:0019556
description: Histidine catabolic process to glutamate and formamide
memo: https://amigo.geneontology.org/amigo/term/GO:0019556
golevel: 10
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0019556_Histidine_catabolic_process_to_glutamate_and_formamide


id: GO:0019829
description: ATPase-coupled cation transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019829
golevel: 6
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0019829_ATPase-coupled_cation_transmembrane_transporter_activity


id: GO:0030435
description: Sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0030435
golevel: 3
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0030435_Sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0030613
description: Oxidoreductase activity, acting on phosphorus or arsenic in donors
memo: https://amigo.geneontology.org/amigo/term/GO:0030613
golevel: 3
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0030613_Oxidoreductase_activity,_acting_on_phosphorus_or_arsenic_in_donors


id: GO:0030614
description: Oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0030614
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0030614_Oxidoreductase_activity,_acting_on_phosphorus_or_arsenic_in_donors,_disulfide_as_acceptor


id: GO:0031233
description: Intrinsic component of external side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031233
name:
  GOCC.STRING_v12.0_1041826_STRINGid_GO:0031233_Intrinsic_component_of_external_side_of_plasma_membrane


id: GO:0031235
description: Intrinsic component of the cytoplasmic side of the plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031235
name:
  GOCC.STRING_v12.0_1041826_STRINGid_GO:0031235_Intrinsic_component_of_the_cytoplasmic_side_of_the_plasma_membrane


id: GO:0031554
description: Regulation of DNA-templated transcription, termination
memo: https://amigo.geneontology.org/amigo/term/GO:0031554
golevel: 11
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0031554_Regulation_of_DNA-templated_transcription,_termination


id: GO:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
golevel: 3
name:
  GOCC.STRING_v12.0_1041826_STRINGid_GO:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GO:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
golevel: 3
name:
  GOCC.STRING_v12.0_1041826_STRINGid_GO:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GO:0033467
description: CMP-keto-3-deoxy-D-manno-octulosonic acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033467
golevel: 7
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0033467_CMP-keto-3-deoxy-D-manno-octulosonic_acid_metabolic_process


id: GO:0033468
description: CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033468
golevel: 8
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0033468_CMP-keto-3-deoxy-D-manno-octulosonic_acid_biosynthetic_process


id: GO:0033512
description: L-lysine catabolic process to acetyl-CoA via saccharopine
memo: https://amigo.geneontology.org/amigo/term/GO:0033512
golevel: 13
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0033512_L-lysine_catabolic_process_to_acetyl-CoA_via_saccharopine


id: GO:0033695
description: Oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0033695
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0033695_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_quinone_or_similar_compound_as_acceptor


id: GO:0033744
description: L-methionine:thioredoxin-disulfide S-oxidoreductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033744
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0033744_L-methionine:thioredoxin-disulfide_S-oxidoreductase_activity


id: GO:0033764
description: Steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0033764
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0033764_Steroid_dehydrogenase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0033818
description: Beta-ketoacyl-acyl-carrier-protein synthase III activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033818
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0033818_Beta-ketoacyl-acyl-carrier-protein_synthase_III_activity


id: GO:0034023
description: 5-(carboxyamino)imidazole ribonucleotide mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034023
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0034023_5-(carboxyamino)imidazole_ribonucleotide_mutase_activity


id: GO:0034028
description: 5-(carboxyamino)imidazole ribonucleotide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034028
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0034028_5-(carboxyamino)imidazole_ribonucleotide_synthase_activity


id: GO:0034249
description: Negative regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034249
golevel: 6
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0034249_Negative_regulation_of_cellular_amide_metabolic_process


id: GO:0034250
description: Positive regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034250
golevel: 6
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0034250_Positive_regulation_of_cellular_amide_metabolic_process


id: GO:0034257
description: Nicotinamide riboside transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034257
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0034257_Nicotinamide_riboside_transmembrane_transporter_activity


id: GO:0034404
description: Nucleobase-containing small molecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034404
golevel: 6
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0034404_Nucleobase-containing_small_molecule_biosynthetic_process


id: GO:0034639
description: L-amino acid efflux transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034639
golevel: 7
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0034639_L-amino_acid_efflux_transmembrane_transporter_activity


id: GO:0034656
description: Nucleobase-containing small molecule catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034656
golevel: 6
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0034656_Nucleobase-containing_small_molecule_catabolic_process


id: GO:0035592
description: Establishment of protein localization to extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0035592
golevel: 6
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0035592_Establishment_of_protein_localization_to_extracellular_region


id: GO:0035998
description: 7,8-dihydroneopterin 3-triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0035998
golevel: 6
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0035998_7,8-dihydroneopterin_3-triphosphate_biosynthetic_process


id: GO:0036361
description: Racemase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0036361
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0036361_Racemase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0042083
description: 5,10-methylenetetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042083
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0042083_5,10-methylenetetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042084
description: 5-methyltetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042084
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0042084_5-methyltetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042777
description: Proton motive force-driven plasma membrane ATP synthesis
memo: https://amigo.geneontology.org/amigo/term/GO:0042777
golevel: 13
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0042777_Proton_motive_force-driven_plasma_membrane_ATP_synthesis


id: GO:0044419
description: Biological process involved in interspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0044419
golevel: 1
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0044419_Biological_process_involved_in_interspecies_interaction_between_organisms


id: GO:0044769
description: ATPase activity, coupled to transmembrane movement of ions, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0044769
golevel: 7
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0044769_ATPase_activity,_coupled_to_transmembrane_movement_of_ions,_rotational_mechanism


id: GO:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
golevel: 6
name:
  GOCC.STRING_v12.0_1041826_STRINGid_GO:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GO:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
golevel: 6
name:
  GOCC.STRING_v12.0_1041826_STRINGid_GO:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GO:0045934
description: Negative regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045934
golevel: 6
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0045934_Negative_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0045935
description: Positive regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045935
golevel: 6
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0045935_Positive_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0046537
description: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046537
golevel: 6
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0046537_2,3-bisphosphoglycerate-independent_phosphoglycerate_mutase_activity


id: GO:0046912
description: Acyltransferase activity, acyl groups converted into alkyl on transfer
memo: https://amigo.geneontology.org/amigo/term/GO:0046912
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0046912_Acyltransferase_activity,_acyl_groups_converted_into_alkyl_on_transfer


id: GO:0046915
description: Transition metal ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046915
golevel: 6
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0046915_Transition_metal_ion_transmembrane_transporter_activity


id: GO:0046933
description: Proton-transporting ATP synthase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046933
golevel: 8
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0046933_Proton-transporting_ATP_synthase_activity,_rotational_mechanism


id: GO:0046961
description: Proton-transporting ATPase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046961
golevel: 8
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0046961_Proton-transporting_ATPase_activity,_rotational_mechanism


id: GO:0047001
description: 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047001
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0047001_2-dehydro-3-deoxy-D-gluconate_5-dehydrogenase_activity


id: GO:0047451
description: 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047451
golevel: 6
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0047451_3-hydroxyoctanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0047480
description: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047480
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0047480_UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine_ligase_activity


id: GO:0048646
description: Anatomical structure formation involved in morphogenesis
memo: https://amigo.geneontology.org/amigo/term/GO:0048646
golevel: 2
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0048646_Anatomical_structure_formation_involved_in_morphogenesis


id: GO:0050486
description: Intramolecular transferase activity, transferring hydroxy groups
memo: https://amigo.geneontology.org/amigo/term/GO:0050486
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0050486_Intramolecular_transferase_activity,_transferring_hydroxy_groups


id: GO:0050511
description: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050511
golevel: 6
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0050511_Undecaprenyldiphospho-muramoylpentapeptide_beta-N-acetylglucosaminyltransferase_activity


id: GO:0051003
description: Ligase activity, forming nitrogen-metal bonds, forming coordination complexes
memo: https://amigo.geneontology.org/amigo/term/GO:0051003
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0051003_Ligase_activity,_forming_nitrogen-metal_bonds,_forming_coordination_complexes


id: GO:0051075
description: S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051075
golevel: 3
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0051075_S-adenosylmethionine:tRNA_ribosyltransferase-isomerase_activity


id: GO:0051172
description: Negative regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051172
golevel: 5
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0051172_Negative_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051173
description: Positive regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051173
golevel: 5
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0051173_Positive_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051991
memo: https://amigo.geneontology.org/amigo/term/GO:0051991
golevel: 6
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0051991_UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol_4-beta-N-acetylglucosaminlytransferase_activity

description:
  UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity


id: GO:0051992
memo: https://amigo.geneontology.org/amigo/term/GO:0051992
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0051992_UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate_transferase_activity

description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity


id: GO:0052907
description: 23S rRNA (adenine(1618)-N(6))-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052907
golevel: 9
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0052907_23S_rRNA_(adenine(1618)-N(6))-methyltransferase_activity


id: GO:0052908
description: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052908
golevel: 9
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0052908_16S_rRNA_(adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase_activity


id: GO:0055086
description: Nucleobase-containing small molecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0055086
golevel: 3
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0055086_Nucleobase-containing_small_molecule_metabolic_process


id: GO:0061504
description: Cyclic threonylcarbamoyladenosine biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0061504
golevel: 11
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0061504_Cyclic_threonylcarbamoyladenosine_biosynthetic_process


id: GO:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
golevel: 4
name:
  GOCC.STRING_v12.0_1041826_STRINGid_GO:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GO:0070204
description: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0070204
golevel: 4
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0070204_2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid_synthase_activity


id: GO:0070626
memo: https://amigo.geneontology.org/amigo/term/GO:0070626
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0070626_(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)_succinate_lyase_(fumarate-forming)_activity

description:
  (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity


id: GO:0070647
description: Protein modification by small protein conjugation or removal
memo: https://amigo.geneontology.org/amigo/term/GO:0070647
golevel: 6
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0070647_Protein_modification_by_small_protein_conjugation_or_removal


id: GO:0071575
description: Integral component of external side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0071575
name:
  GOCC.STRING_v12.0_1041826_STRINGid_GO:0071575_Integral_component_of_external_side_of_plasma_membrane


id: GO:0071951
description: Conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
memo: https://amigo.geneontology.org/amigo/term/GO:0071951
golevel: 12
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0071951_Conversion_of_methionyl-tRNA_to_N-formyl-methionyl-tRNA


id: GO:0072599
description: Establishment of protein localization to endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0072599
golevel: 7
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0072599_Establishment_of_protein_localization_to_endoplasmic_reticulum


id: GO:0097174
description: 1,6-anhydro-N-acetyl-beta-muramic acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0097174
golevel: 7
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0097174_1,6-anhydro-N-acetyl-beta-muramic_acid_metabolic_process


id: GO:0097175
description: 1,6-anhydro-N-acetyl-beta-muramic acid catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0097175
golevel: 8
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0097175_1,6-anhydro-N-acetyl-beta-muramic_acid_catabolic_process


id: GO:0097588
description: Archaeal or bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:0097588
golevel: 4
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0097588_Archaeal_or_bacterial-type_flagellum-dependent_cell_motility


id: GO:0098519
description: Nucleotide phosphatase activity, acting on free nucleotides
memo: https://amigo.geneontology.org/amigo/term/GO:0098519
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0098519_Nucleotide_phosphatase_activity,_acting_on_free_nucleotides


id: GO:0098742
description: Cell-cell adhesion via plasma-membrane adhesion molecules
memo: https://amigo.geneontology.org/amigo/term/GO:0098742
golevel: 4
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0098742_Cell-cell_adhesion_via_plasma-membrane_adhesion_molecules


id: GO:0102027
description: S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102027
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0102027_S-adenosylmethionine:2-demethylquinol-8_methyltransferase_activity


id: GO:0102094
description: S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102094
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0102094_S-adenosylmethionine:2-demethylmenaquinol_methyltransferase_activity


id: GO:0102552
description: Lipoyl synthase activity (acting on glycine-cleavage complex H protein
memo: https://amigo.geneontology.org/amigo/term/GO:0102552
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0102552_Lipoyl_synthase_activity_(acting_on_glycine-cleavage_complex_H_protein


id: GO:0102553
description: Lipoyl synthase activity (acting on pyruvate dehydrogenase E2 protein)
memo: https://amigo.geneontology.org/amigo/term/GO:0102553
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0102553_Lipoyl_synthase_activity_(acting_on_pyruvate_dehydrogenase_E2_protein)


id: GO:0102955
description: S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102955
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0102955_S-adenosylmethionine:2-demethylmenaquinol-7_methyltransferase_activity


id: GO:0106074
description: aminoacyl-tRNA metabolism involved in translational fidelity
memo: https://amigo.geneontology.org/amigo/term/GO:0106074
golevel: 9
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:0106074_aminoacyl-tRNA_metabolism_involved_in_translational_fidelity


id: GO:0140078
description: Class I DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0140078
golevel: 5
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:0140078_Class_I_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:1900191
description: Negative regulation of single-species biofilm formation
memo: https://amigo.geneontology.org/amigo/term/GO:1900191
golevel: 7
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:1900191_Negative_regulation_of_single-species_biofilm_formation


id: GO:1901505
description: Carbohydrate derivative transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901505
golevel: 3
name:
  GOMF.STRING_v12.0_1041826_STRINGid_GO:1901505_Carbohydrate_derivative_transmembrane_transporter_activity


id: GO:1902021
description: Regulation of bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:1902021
golevel: 6
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:1902021_Regulation_of_bacterial-type_flagellum-dependent_cell_motility


id: GO:1902221
description: Erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1902221
golevel: 8
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:1902221_Erythrose_4-phosphate/phosphoenolpyruvate_family_amino_acid_metabolic_process


id: GO:1902222
description: Erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1902222
golevel: 9
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:1902222_Erythrose_4-phosphate/phosphoenolpyruvate_family_amino_acid_catabolic_process


id: GO:1902223
description: Erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:1902223
golevel: 9
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:1902223_Erythrose_4-phosphate/phosphoenolpyruvate_family_amino_acid_biosynthetic_process


id: GO:1903507
description: Negative regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903507
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:1903507_Negative_regulation_of_nucleic_acid-templated_transcription


id: GO:1903508
description: Positive regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903508
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:1903508_Positive_regulation_of_nucleic_acid-templated_transcription


id: GO:1904951
description: Positive regulation of establishment of protein localization
memo: https://amigo.geneontology.org/amigo/term/GO:1904951
golevel: 7
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:1904951_Positive_regulation_of_establishment_of_protein_localization


id: GO:2000112
description: Regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000112
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:2000112_Regulation_of_cellular_macromolecule_biosynthetic_process


id: GO:2000113
description: Negative regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000113
name:
  GOBP.STRING_v12.0_1041826_STRINGid_GO:2000113_Negative_regulation_of_cellular_macromolecule_biosynthetic_process


id: GOCC:0000015
description: Phosphopyruvate hydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000015
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1041826_STRINGid_GOCC:0000015_Phosphopyruvate_hydratase_complex


id: GOCC:0000138
description: Golgi trans cisterna
memo: https://amigo.geneontology.org/amigo/term/GO:0000138
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1041826_STRINGid_GOCC:0000138_Golgi_trans_cisterna


id: GOCC:0000151
description: Ubiquitin ligase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000151
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1041826_STRINGid_GOCC:0000151_Ubiquitin_ligase_complex


id: GOCC:0000313
description: Organellar ribosome
memo: https://amigo.geneontology.org/amigo/term/GO:0000313
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1041826_STRINGid_GOCC:0000313_Organellar_ribosome


id: GOCC:0000314
description: Organellar small ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0000314
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1041826_STRINGid_GOCC:0000314_Organellar_small_ribosomal_subunit


id: GOCC:0000325
description: Plant-type vacuole
memo: https://amigo.geneontology.org/amigo/term/GO:0000325
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1041826_STRINGid_GOCC:0000325_Plant-type_vacuole


id: GOCC:0000345
description: Cytosolic DNA-directed RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000345
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1041826_STRINGid_GOCC:0000345_Cytosolic_DNA-directed_RNA_polymerase_complex


id: GOCC:0000408
description: EKC/KEOPS complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000408
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1041826_STRINGid_GOCC:0000408_EKC/KEOPS_complex


id: GOCC:0000428
description: DNA-directed RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000428
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1041826_STRINGid_GOCC:0000428_DNA-directed_RNA_polymerase_complex


id: GOCC:0000502
description: Proteasome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000502
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1041826_STRINGid_GOCC:0000502_Proteasome_complex


id: GOCC:0000781
description: Chromosome, telomeric region
memo: https://amigo.geneontology.org/amigo/term/GO:0000781
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1041826_STRINGid_GOCC:0000781_Chromosome,_telomeric_region


id: GOCC:0000930
description: Gamma-tubulin complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000930
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1041826_STRINGid_GOCC:0000930_Gamma-tubulin_complex


id: GOCC:0000931
description: Gamma-tubulin large complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000931
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1041826_STRINGid_GOCC:0000931_Gamma-tubulin_large_complex


id: GOCC:0002189
description: Ribose phosphate diphosphokinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0002189
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1041826_STRINGid_GOCC:0002189_Ribose_phosphate_diphosphokinase_complex


id: GOCC:0005576
description: Extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0005576
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1041826_STRINGid_GOCC:0005576_Extracellular_region


id: GOCC:0005604
description: Basement membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005604
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1041826_STRINGid_GOCC:0005604_Basement_membrane


id: GOCC:0005615
description: Extracellular space
memo: https://amigo.geneontology.org/amigo/term/GO:0005615
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1041826_STRINGid_GOCC:0005615_Extracellular_space


id: GOCC:0005727
description: Extrachromosomal circular DNA
memo: https://amigo.geneontology.org/amigo/term/GO:0005727
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1041826_STRINGid_GOCC:0005727_Extrachromosomal_circular_DNA


id: GOCC:0005740
description: Mitochondrial envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0005740
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1041826_STRINGid_GOCC:0005740_Mitochondrial_envelope


id: GOCC:0005741
description: Mitochondrial outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005741
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1041826_STRINGid_GOCC:0005741_Mitochondrial_outer_membrane


