# geneInfo

ensembl_gene_id: HA48_11570
symbol: pepA
gene_biotype: protein_coding
description:
  Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: HA48_11575
symbol: HA48_11575
gene_biotype: protein_coding
description:
  Lipopolysaccharide ABC transporter permease LptF; With LptBGC is involved in lipopolysaccharide export; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_11580
symbol: HA48_11580
gene_biotype: protein_coding
description:
  Lipopolysaccharide ABC transporter permease LptG; With LptABCF is involved in the transport of lipopolysaccharides; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_11615
symbol: HA48_11615
gene_biotype: protein_coding
description:
  Stress protection protein MarC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_11630
symbol: azoR
gene_biotype: protein_coding
description:
  FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.


ensembl_gene_id: HA48_11660
symbol: HA48_11660
gene_biotype: protein_coding
description:
  Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_11665
symbol: HA48_11665
gene_biotype: protein_coding
description:
  Site-specific DNA-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_11675
symbol: HA48_11675
gene_biotype: protein_coding
description:
  Peptidase S8; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_11680
symbol: HA48_11680
gene_biotype: protein_coding
description:
  Helicase SNF2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_11720
symbol: HA48_11720
gene_biotype: protein_coding
description:
  NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_11730
symbol: HA48_11730
gene_biotype: protein_coding
description:
  3-beta hydroxysteroid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_11740
symbol: HA48_11740
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0149 family.


ensembl_gene_id: HA48_11745
symbol: HA48_11745
gene_biotype: protein_coding
description:
  2-oxobutyrate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron/ascorbate-dependent oxidoreductase family.


ensembl_gene_id: HA48_11750
symbol: HA48_11750
gene_biotype: protein_coding
description:
  Metal ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_11780
symbol: HA48_11780
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase subunit alpha; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_11785
symbol: HA48_11785
gene_biotype: protein_coding
description:
  2Fe-2S ferredoxin; Plays a role in maintenance and possibly the biosynthesis of diferric-tyrosyl radical cofactor, essential for nucleotide reduction catalyzed by ribonucleotide reductases; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_11790
symbol: HA48_11790
gene_biotype: protein_coding
description:
  Competence/damage-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.


ensembl_gene_id: HA48_11795
symbol: HA48_11795
gene_biotype: protein_coding
description:
  Protein ElaB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_11805
symbol: mdoD
gene_biotype: protein_coding
description:
  Glucan biosynthesis protein D; Involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_11810
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: HA48_11815
symbol: HA48_11815
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_11820
symbol: HA48_11820
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_11825
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: HA48_11830
symbol: HA48_11830
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: HA48_11835
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: HA48_11845
symbol: HA48_11845
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.


ensembl_gene_id: HA48_11850
symbol: HA48_11850
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.


ensembl_gene_id: HA48_11855
symbol: HA48_11855
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_11860
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit C/D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: HA48_11865
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: HA48_11870
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: HA48_11875
symbol: HA48_11875
gene_biotype: protein_coding
description:
  Transcriptional regulator LrhA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: HA48_11880
symbol: HA48_11880
gene_biotype: protein_coding
description:
  Aminotransferase; Broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_11885
symbol: HA48_11885
gene_biotype: protein_coding
description:
  5'-deoxynucleotidase; Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates.


ensembl_gene_id: HA48_11890
symbol: HA48_11890
gene_biotype: protein_coding
description:
  Sugar phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_11895
symbol: HA48_11895
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0304 family.


ensembl_gene_id: HA48_11905
symbol: ackA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: HA48_11910
symbol: HA48_11910
gene_biotype: protein_coding
description:
  Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.


ensembl_gene_id: HA48_11915
symbol: HA48_11915
gene_biotype: protein_coding
description:
  4-aminobutyrate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: HA48_11920
symbol: HA48_11920
gene_biotype: protein_coding
description:
  NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_11925
symbol: HA48_11925
gene_biotype: protein_coding
description:
  Glutathione S-transferase; Catalyzes the formation of 2,4-dinitrophenyl-S-glutathione from 1-chloro-2,4-dinitrobenzene and glutathione; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_11930
symbol: HA48_11930
gene_biotype: protein_coding
description:
  TIGR01777 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_11935
symbol: HA48_11935
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_11955
symbol: HA48_11955
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein CcdA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_11965
symbol: HA48_11965
gene_biotype: protein_coding
description:
  D-arabinitol 4-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_11970
symbol: HA48_11970
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_11975
symbol: HA48_11975
gene_biotype: protein_coding
description:
  Histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_11980
symbol: HA48_11980
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; With HisJPQ is involved in transport of histidine, lysine, arginine and ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_11985
symbol: HA48_11985
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; With HisJMP is involved in the transport of histidine/lysine/arginine/ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_11990
symbol: HA48_11990
gene_biotype: protein_coding
description:
  Histidine ABC transporter substrate-binding protein HisJ; With HisPMQ is involved in the transport of histidine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: HA48_11995
symbol: ubiX
gene_biotype: protein_coding
description:
  3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: HA48_12000
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: HA48_12005
symbol: HA48_12005
gene_biotype: protein_coding
description:
  Membrane protein required for colicin V production; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12020
symbol: HA48_12020
gene_biotype: protein_coding
description:
  Cell division protein DedD; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12025
symbol: HA48_12025
gene_biotype: protein_coding
description:
  UDP-glucose 4-epimerase GalE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: HA48_12030
symbol: HA48_12030
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: HA48_12035
symbol: HA48_12035
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: HA48_12040
symbol: HA48_12040
gene_biotype: protein_coding
description:
  Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12045
symbol: HA48_12045
gene_biotype: protein_coding
description:
  N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12055
symbol: HA48_12055
gene_biotype: protein_coding
description:
  Aminotransferase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12070
symbol: HA48_12070
gene_biotype: protein_coding
description:
  Phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.


ensembl_gene_id: HA48_12075
symbol: HA48_12075
gene_biotype: protein_coding
description:
  Chain length-determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12080
symbol: HA48_12080
gene_biotype: protein_coding
description:
  Succinylglutamate desuccinylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12085
symbol: HA48_12085
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: HA48_12100
symbol: HA48_12100
gene_biotype: protein_coding
description:
  Toxin HipA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12105
symbol: hisI
gene_biotype: protein_coding
description:
  Bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase; Catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; In the N-terminal section; belongs to the PRA-CH family.


ensembl_gene_id: HA48_12110
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: HA48_12115
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12125
symbol: hisB
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; In the N-terminal section; belongs to the histidinol- phosphatase family.


ensembl_gene_id: HA48_12130
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate transaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: HA48_12135
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: HA48_12140
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity.


ensembl_gene_id: HA48_12150
symbol: HA48_12150
gene_biotype: protein_coding
description:
  Gamma-glutamylputrescine oxidoreductase; Catalyzes the formation of gamma-glutamyl-gamma-aminobutyraldehyde from gamma-glutamylputrescine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12155
symbol: HA48_12155
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates genes involved in putrescine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12160
symbol: HA48_12160
gene_biotype: protein_coding
description:
  Gamma-glutamyl-gamma-aminobutyrate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12165
symbol: HA48_12165
gene_biotype: protein_coding
description:
  Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family.


ensembl_gene_id: HA48_12170
symbol: HA48_12170
gene_biotype: protein_coding
description:
  Putrescine/spermidine ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12185
symbol: HA48_12185
gene_biotype: protein_coding
description:
  Serine-type D-Ala-D-Ala carboxypeptidase; Penicillin-binding protein 5; removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12190
symbol: HA48_12190
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0265 family.


ensembl_gene_id: HA48_12200
symbol: lacI
gene_biotype: protein_coding
description:
  Transcriptional repressor of lac operon; forms a homotetramer as a dimer of dimers; binds specific sites in lac operon resulting in DNA looping between the operators; binds allolactose as inducer; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12215
symbol: HA48_12215
gene_biotype: protein_coding
description:
  Translation elongation factor G; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12220
symbol: HA48_12220
gene_biotype: protein_coding
description:
  Fatty acid desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12235
symbol: HA48_12235
gene_biotype: protein_coding
description:
  Metal chaperone, involved in Zn homeostasis, GTPase of family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12245
symbol: metN-3
gene_biotype: protein_coding
description:
  Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: HA48_12265
symbol: metG
gene_biotype: protein_coding
description:
  methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12275
symbol: cdd
gene_biotype: protein_coding
description:
  CidB/LrgB family autolysis modulator; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis.


ensembl_gene_id: HA48_12280
symbol: maeA
gene_biotype: protein_coding
description:
  Malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12290
symbol: HA48_12290
gene_biotype: protein_coding
description:
  Vancomycin high temperature exclusion protein; Involved in vancomycin sensitivity and other barrier functions of the cell envelope; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: HA48_12295
symbol: HA48_12295
gene_biotype: protein_coding
description:
  Galactose/methyl galactoside ABC transporter ATP-binding protein MglA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12300
symbol: HA48_12300
gene_biotype: protein_coding
description:
  Methyl-galactoside ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12305
symbol: HA48_12305
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator GalS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12315
symbol: folE
gene_biotype: protein_coding
description:
  GTP cyclohydrolase I FolE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12330
symbol: HA48_12330
gene_biotype: protein_coding
description:
  S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.


ensembl_gene_id: HA48_12340
symbol: HA48_12340
gene_biotype: protein_coding
description:
  Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12345
symbol: HA48_12345
gene_biotype: protein_coding
description:
  Iron-siderophore ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: HA48_12355
symbol: HA48_12355
gene_biotype: protein_coding
description:
  Lysine transporter; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: HA48_12365
symbol: nfo
gene_biotype: protein_coding
description:
  Deoxyribonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.


ensembl_gene_id: HA48_12370
symbol: HA48_12370
gene_biotype: protein_coding
description:
  PTS fructose transporter subunit IIBC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12375
symbol: HA48_12375
gene_biotype: protein_coding
description:
  1-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: HA48_12380
symbol: HA48_12380
gene_biotype: protein_coding
description:
  Bifunctional PTS fructose transporter subunit IIA/HPr protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12390
symbol: HA48_12390
gene_biotype: protein_coding
description:
  Elongation factor P-like protein YeiP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the elongation factor P family.


ensembl_gene_id: HA48_12400
symbol: lpxT
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the modification of the lipid A domain of lipopolysaccharides (LPS). Transfers a phosphate group from undecaprenyl pyrophosphate (C55-PP) to lipid A to form lipid A 1- diphosphate. Contributes to the recycling of undecaprenyl phosphate (C55-P); Belongs to the LpxT phosphotransferase family.


ensembl_gene_id: HA48_12405
symbol: HA48_12405
gene_biotype: protein_coding
description:
  Bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12410
symbol: HA48_12410
gene_biotype: protein_coding
description:
  Involved in resistance to the phages N4 and lambda; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12415
symbol: HA48_12415
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; With YejBEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12420
symbol: HA48_12420
gene_biotype: protein_coding
description:
  Microcin C ABC transporter permease YejB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12425
symbol: HA48_12425
gene_biotype: protein_coding
description:
  Microcin ABC transporter permease; Part of the microcin C transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12435
symbol: HA48_12435
gene_biotype: protein_coding
description:
  Microcin C ABC transporter ATP-binding protein YejF; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12445
symbol: HA48_12445
gene_biotype: protein_coding
description:
  Bcr/CflA family drug resistance efflux transporter; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: HA48_12455
symbol: rplY
gene_biotype: protein_coding
description:
  50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family.


ensembl_gene_id: HA48_12460
symbol: HA48_12460
gene_biotype: protein_coding
description:
  Nucleoid-associated protein YejK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12465
symbol: HA48_12465
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0352 family.


ensembl_gene_id: HA48_12490
symbol: HA48_12490
gene_biotype: protein_coding
description:
  4-phosphopantetheinyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the P-Pant transferase superfamily.


ensembl_gene_id: HA48_12500
symbol: HA48_12500
gene_biotype: protein_coding
description:
  Alpha-ketoglutarate-dependent dioxygenase AlkB; Oxidative demethylase of N1-methyladenine or N3-methylcytosine DNA lesions; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12505
symbol: HA48_12505
gene_biotype: protein_coding
description:
  Protoheme IX biogenesis protein HemY; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12510
symbol: HA48_12510
gene_biotype: protein_coding
description:
  uroporphyrinogen-III C-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12515
symbol: HA48_12515
gene_biotype: protein_coding
description:
  uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: HA48_12520
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: HA48_12530
symbol: HA48_12530
gene_biotype: protein_coding
description:
  Adenylate cyclase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12535
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: HA48_12540
symbol: HA48_12540
gene_biotype: protein_coding
description:
  DUF484 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12545
symbol: xerC
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Binds cooperatively to specific DNA consensus sequences that are separated from XerD binding sites by a short central region, forming the heterotetrameric XerC-XerD complex that recombines DNA substrates. The complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. In the complex XerC specifically exchanges t [...]


ensembl_gene_id: HA48_12550
symbol: HA48_12550
gene_biotype: protein_coding
description:
  Flavin mononucleotide phosphatase; YigB; member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12555
symbol: HA48_12555
gene_biotype: protein_coding
description:
  DNA helicase II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12560
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: HA48_12575
symbol: HA48_12575
gene_biotype: protein_coding
description:
  Chloramphenical resistance permease RarD; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12580
symbol: HA48_12580
gene_biotype: protein_coding
description:
  Phospholipase; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family.


ensembl_gene_id: HA48_12585
symbol: HA48_12585
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12590
symbol: HA48_12590
gene_biotype: protein_coding
description:
  Threonine export protein RhtC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12595
symbol: rhtB
gene_biotype: protein_coding
description:
  Homoserine/homoserine lactone efflux protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12600
symbol: HA48_12600
gene_biotype: protein_coding
description:
  Lysophospholipase; Lecithinase B; catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine; can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12605
symbol: HA48_12605
gene_biotype: protein_coding
description:
  Sugar/pyridoxal phosphate phosphatase YigL; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12610
symbol: HA48_12610
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12625
symbol: HA48_12625
gene_biotype: protein_coding
description:
  LysR family transcriptional regulator; Homocysteine-binding; positive regulator of metA, metE and metH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: HA48_12630
symbol: metE
gene_biotype: protein_coding
description:
  5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.


ensembl_gene_id: HA48_12635
symbol: HA48_12635
gene_biotype: protein_coding
description:
  Carboxymethylenebutenolidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12645
symbol: HA48_12645
gene_biotype: protein_coding
description:
  Uridine phosphorylase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12650
symbol: HA48_12650
gene_biotype: protein_coding
description:
  Recombinase RmuC; YigN; nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence; transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12655
symbol: ubiE
gene_biotype: protein_coding
description:
  Bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: HA48_12665
symbol: ubiB
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis regulatory protein kinase UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis.


ensembl_gene_id: HA48_12670
symbol: tatA
gene_biotype: protein_coding
description:
  Sec-independent protein translocase TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: HA48_12680
symbol: tatC
gene_biotype: protein_coding
description:
  Twin arginine-targeting protein translocase TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: HA48_12685
symbol: tatD
gene_biotype: protein_coding
description:
  Hydrolase TatD; 3'-5' exonuclease that prefers single-stranded DNA and RNA. May play a role in the H(2)O(2)-induced DNA damage repair. Belongs to the metallo-dependent hydrolases superfamily. TatD-type hydrolase family. TatD subfamily.


ensembl_gene_id: HA48_12690
symbol: rfaH
gene_biotype: protein_coding
description:
  Transcriptional activator RfaH; Enhances distal genes transcription elongation in a specialized subset of operons that encode extracytoplasmic components. RfaH is recruited into a multi-component RNA polymerase complex by the ops element, which is a short conserved DNA sequence located downstream of the main promoter of these operons. Once bound, RfaH suppresses pausing and inhibits Rho-dependent and intrinsic termination at a subset of sites. Termination signals are bypassed, which allows complete synthesis of long RNA chains.


ensembl_gene_id: HA48_12695
symbol: HA48_12695
gene_biotype: protein_coding
description:
  Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S51 family.


ensembl_gene_id: HA48_12700
symbol: ubiD
gene_biotype: protein_coding
description:
  3-octaprenyl-4-hydroxybenzoate decarboxylase; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis.


ensembl_gene_id: HA48_12705
symbol: HA48_12705
gene_biotype: protein_coding
description:
  NAD(P)H-flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12710
symbol: fadA
gene_biotype: protein_coding
description:
  3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed.


ensembl_gene_id: HA48_12720
symbol: pepQ
gene_biotype: protein_coding
description:
  Multifunctional fatty acid oxidation complex subunit alpha; Splits dipeptides with a prolyl residue in the C-terminal position.


ensembl_gene_id: HA48_12725
symbol: HA48_12725
gene_biotype: protein_coding
description:
  YigZ family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12730
symbol: HA48_12730
gene_biotype: protein_coding
description:
  Potassium transporter; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.


ensembl_gene_id: HA48_12735
symbol: HA48_12735
gene_biotype: protein_coding
description:
  Protoporphyrinogen oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12745
symbol: argO
gene_biotype: protein_coding
description:
  FAD-dependent oxidoreductase; Involved in the export of arginine. Important to control the intracellular level of arginine and the correct balance between arginine and lysine; Belongs to the LysE/ArgO transporter (TC 2.A.75) family.


ensembl_gene_id: HA48_12750
symbol: HA48_12750
gene_biotype: protein_coding
description:
  Mechanosensitive ion channel protein MscS; Participates in the regulation of osmotic pressure changes within the cel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12755
symbol: HA48_12755
gene_biotype: protein_coding
description:
  Class II fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis; Belongs to the class II fructose-bisphosphate aldolase family.


ensembl_gene_id: HA48_12760
symbol: pgk
gene_biotype: protein_coding
description:
  Phosphoglycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate kinase family.


ensembl_gene_id: HA48_12765
symbol: epd
gene_biotype: protein_coding
description:
  Erythrose-4-phosphate dehydrogenase; Catalyzes the NAD-dependent conversion of D-erythrose 4- phosphate to 4-phosphoerythronate.


ensembl_gene_id: HA48_12775
symbol: HA48_12775
gene_biotype: protein_coding
description:
  Metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12780
symbol: speB
gene_biotype: protein_coding
description:
  Agmatinase; Catalyzes the formation of putrescine from agmatine. Belongs to the arginase family. Agmatinase subfamily.


ensembl_gene_id: HA48_12790
symbol: HA48_12790
gene_biotype: protein_coding
description:
  Secretion protein HlyD; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12795
symbol: HA48_12795
gene_biotype: protein_coding
description:
  Type I secretion protein TolC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12820
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: HA48_12830
symbol: HA48_12830
gene_biotype: protein_coding
description:
  MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: HA48_12835
symbol: sprT
gene_biotype: protein_coding
description:
  SprT family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SprT family.


ensembl_gene_id: HA48_12845
symbol: HA48_12845
gene_biotype: protein_coding
description:
  16S rRNA (uracil(1498)-N(3))-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: HA48_12850
symbol: gshB
gene_biotype: protein_coding
description:
  Glutathione synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic GSH synthase family.


ensembl_gene_id: HA48_12855
symbol: HA48_12855
gene_biotype: protein_coding
description:
  DUF179 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0301 (AlgH) family.


ensembl_gene_id: HA48_12860
symbol: yqgF
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvA; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: HA48_12865
symbol: HA48_12865
gene_biotype: protein_coding
description:
  Type IV pili twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12870
symbol: HA48_12870
gene_biotype: protein_coding
description:
  YggS family pyridoxal phosphate enzyme; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis.


ensembl_gene_id: HA48_12880
symbol: HA48_12880
gene_biotype: protein_coding
description:
  Non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: HA48_12885
symbol: HA48_12885
gene_biotype: protein_coding
description:
  YggW family oxidoreductase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: HA48_12900
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanosine(46)-N7)-methyltransferase TrmB; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.


ensembl_gene_id: HA48_12910
symbol: HA48_12910
gene_biotype: protein_coding
description:
  Oxidative damage protection protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes; Belongs to the Fe(2+)-trafficking protein family.


ensembl_gene_id: HA48_12915
symbol: HA48_12915
gene_biotype: protein_coding
description:
  Murein transglycosylase C; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division.


ensembl_gene_id: HA48_12930
symbol: HA48_12930
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Orn/Lys/Arg decarboxylase class-II family.


ensembl_gene_id: HA48_12935
symbol: HA48_12935
gene_biotype: protein_coding
description:
  Siderophore biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12945
symbol: HA48_12945
gene_biotype: protein_coding
description:
  Short-chain isoprenyl diphosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12950
symbol: HA48_12950
gene_biotype: protein_coding
description:
  Carboxylate--amine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12955
symbol: HA48_12955
gene_biotype: protein_coding
description:
  4-hydroxy-2-oxovalerate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family.


ensembl_gene_id: HA48_12960
symbol: HA48_12960
gene_biotype: protein_coding
description:
  Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_12970
symbol: HA48_12970
gene_biotype: protein_coding
description:
  Cytosine permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the purine-cytosine permease (2.A.39) family.


ensembl_gene_id: HA48_12975
symbol: HA48_12975
gene_biotype: protein_coding
description:
  Carnitine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: HA48_12995
symbol: HA48_12995
gene_biotype: protein_coding
description:
  Alpha/beta hydrolase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13020
symbol: HA48_13020
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: HA48_13025
symbol: HA48_13025
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DapA family.


ensembl_gene_id: HA48_13030
symbol: HA48_13030
gene_biotype: protein_coding
description:
  Aromatic amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13050
symbol: HA48_13050
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis protein UbiD; Catalyzes the reversible decarboxylation of aromatic carboxylic acids.


ensembl_gene_id: HA48_13065
symbol: HA48_13065
gene_biotype: protein_coding
description:
  Oxalate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13075
symbol: HA48_13075
gene_biotype: protein_coding
description:
  CbbBc protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: HA48_13090
symbol: HA48_13090
gene_biotype: protein_coding
description:
  Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13095
symbol: HA48_13095
gene_biotype: protein_coding
description:
  Two-component-system connector protein YcgZ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13110
symbol: HA48_13110
gene_biotype: protein_coding
description:
  Aromatic alcohol reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13130
symbol: HA48_13130
gene_biotype: protein_coding
description:
  Response regulator in two-component regulatory system with CusS; regulates the copper efflux system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13140
symbol: HA48_13140
gene_biotype: protein_coding
description:
  Two-component sensor histidine kinase; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13155
symbol: HA48_13155
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13160
symbol: HA48_13160
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13190
symbol: HA48_13190
gene_biotype: protein_coding
description:
  Sulfate ABC transporter permease; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13215
symbol: glsA
gene_biotype: protein_coding
description:
  Glutaminase; Catalyzes the formation of glutamate from glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaminase family.


ensembl_gene_id: HA48_13220
symbol: HA48_13220
gene_biotype: protein_coding
description:
  Chloride channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13235
symbol: HA48_13235
gene_biotype: protein_coding
description:
  Glycogen debranching enzyme GlgX; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13245
symbol: HA48_13245
gene_biotype: protein_coding
description:
  Malto-oligosyltrehalose trehalohydrolase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family.


ensembl_gene_id: HA48_13255
symbol: HA48_13255
gene_biotype: protein_coding
description:
  Metabolite-proton symporter; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13260
symbol: HA48_13260
gene_biotype: protein_coding
description:
  Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13275
symbol: HA48_13275
gene_biotype: protein_coding
description:
  Multidrug DMT transporter permease; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: HA48_13295
symbol: HA48_13295
gene_biotype: protein_coding
description:
  Sorbosone dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13320
symbol: HA48_13320
gene_biotype: protein_coding
description:
  Oxidoreductase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: HA48_13325
symbol: HA48_13325
gene_biotype: protein_coding
description:
  Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13330
symbol: HA48_13330
gene_biotype: protein_coding
description:
  Glycoside hydrolase family 15; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13340
symbol: HA48_13340
gene_biotype: protein_coding
description:
  Formate dehydrogenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13360
symbol: HA48_13360
gene_biotype: protein_coding
description:
  D-erythrulose kinase; Frameshifted; incomplete; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13370
symbol: HA48_13370
gene_biotype: protein_coding
description:
  Ribose 5-phosphate isomerase B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13380
symbol: HA48_13380
gene_biotype: protein_coding
description:
  NADH oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13390
symbol: HA48_13390
gene_biotype: protein_coding
description:
  Glutamate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13400
symbol: HA48_13400
gene_biotype: protein_coding
description:
  Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the catalase family.


ensembl_gene_id: HA48_13405
symbol: HA48_13405
gene_biotype: protein_coding
description:
  Quinoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13410
symbol: HA48_13410
gene_biotype: protein_coding
description:
  Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13420
symbol: HA48_13420
gene_biotype: protein_coding
description:
  NADH:flavin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13435
symbol: HA48_13435
gene_biotype: protein_coding
description:
  L-sorbosone dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13450
symbol: HA48_13450
gene_biotype: protein_coding
description:
  MBL fold metallo-hydrolase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13455
symbol: HA48_13455
gene_biotype: protein_coding
description:
  Protein disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13460
symbol: HA48_13460
gene_biotype: protein_coding
description:
  Copper resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13465
symbol: HA48_13465
gene_biotype: protein_coding
description:
  Protein-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13475
symbol: HA48_13475
gene_biotype: protein_coding
description:
  Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13485
symbol: HA48_13485
gene_biotype: protein_coding
description:
  PTS fructose transporter subunit IIA; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13490
symbol: HA48_13490
gene_biotype: protein_coding
description:
  Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13500
symbol: HA48_13500
gene_biotype: protein_coding
description:
  PTS lactose transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13505
symbol: HA48_13505
gene_biotype: protein_coding
description:
  Permease; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family.


ensembl_gene_id: HA48_13515
symbol: HA48_13515
gene_biotype: protein_coding
description:
  Coenzyme PQQ biosynthesis protein PqqF; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M16 family.


ensembl_gene_id: HA48_13520
symbol: pqqE
gene_biotype: protein_coding
description:
  Pyrroloquinoline quinone biosynthesis protein PqqE; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).


ensembl_gene_id: HA48_13525
symbol: pqqD
gene_biotype: protein_coding
description:
  Pyrroloquinoline quinone biosynthesis protein PqqD; Functions as a PqqA binding protein and presents PqqA to PqqE, in the pyrroloquinoline quinone (PQQ) biosynthetic pathway.


ensembl_gene_id: HA48_13530
symbol: pqqC
gene_biotype: protein_coding
description:
  Pyrroloquinoline quinone biosynthesis protein PqqC; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ.


ensembl_gene_id: HA48_13535
symbol: pqqB
gene_biotype: protein_coding
description:
  Pyrroloquinoline quinone biosynthesis protein PqqB; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family.


ensembl_gene_id: HA48_13550
symbol: HA48_13550
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13555
symbol: HA48_13555
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13565
symbol: HA48_13565
gene_biotype: protein_coding
description:
  TonB-dependent receptor; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13575
symbol: HA48_13575
gene_biotype: protein_coding
description:
  XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13590
symbol: HA48_13590
gene_biotype: protein_coding
description:
  GGDEF domain-containing protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13595
symbol: HA48_13595
gene_biotype: protein_coding
description:
  Pyrroloquinoline quinone-dependent dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13600
symbol: HA48_13600
gene_biotype: protein_coding
description:
  Thiol-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13605
symbol: HA48_13605
gene_biotype: protein_coding
description:
  D-amino-acid oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13640
symbol: HA48_13640
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13645
symbol: HA48_13645
gene_biotype: protein_coding
description:
  Ethyl tert-butyl ether degradation protein EthD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13655
symbol: HA48_13655
gene_biotype: protein_coding
description:
  Nickel transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NiCoT transporter (TC 2.A.52) family.


ensembl_gene_id: HA48_13665
symbol: iolG-3
gene_biotype: protein_coding
description:
  MFS transporter; Involved in the oxidation of myo-inositol (MI) to 2-keto-myo- inositol (2KMI or 2-inosose).


ensembl_gene_id: HA48_13670
symbol: HA48_13670
gene_biotype: protein_coding
description:
  PTS sugar transporter subunit IIA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13690
symbol: HA48_13690
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13695
symbol: HA48_13695
gene_biotype: protein_coding
description:
  Molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13705
symbol: HA48_13705
gene_biotype: protein_coding
description:
  Xanthine dehydrogenase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13715
symbol: HA48_13715
gene_biotype: protein_coding
description:
  Arsenic transporter; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13745
symbol: HA48_13745
gene_biotype: protein_coding
description:
  RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: HA48_13800
symbol: mqo
gene_biotype: protein_coding
description:
  Malate:quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13835
symbol: HA48_13835
gene_biotype: protein_coding
description:
  Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.


ensembl_gene_id: HA48_13845
symbol: HA48_13845
gene_biotype: protein_coding
description:
  Methionine aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13860
symbol: HA48_13860
gene_biotype: protein_coding
description:
  Carboxylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the type-B carboxylesterase/lipase family.


ensembl_gene_id: HA48_13870
symbol: HA48_13870
gene_biotype: protein_coding
description:
  DUF1338 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13875
symbol: HA48_13875
gene_biotype: protein_coding
description:
  4-hydroxybenzoate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13885
symbol: HA48_13885
gene_biotype: protein_coding
description:
  DNA endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13890
symbol: HA48_13890
gene_biotype: protein_coding
description:
  Transcriptional regulator FNR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13895
symbol: HA48_13895
gene_biotype: protein_coding
description:
  Universal stress protein UspE; With UspC and UspD is involved in resistance to UV irradiation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13900
symbol: HA48_13900
gene_biotype: protein_coding
description:
  NAD(P) transhydrogenase subunit beta; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.


ensembl_gene_id: HA48_13905
symbol: HA48_13905
gene_biotype: protein_coding
description:
  NAD(P) transhydrogenase subunit alpha; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the AlaDH/PNT family.


ensembl_gene_id: HA48_13915
symbol: HA48_13915
gene_biotype: protein_coding
description:
  Arginine:ornithine antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13925
symbol: HA48_13925
gene_biotype: protein_coding
description:
  Two-component system response regulator RstA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13930
symbol: HA48_13930
gene_biotype: protein_coding
description:
  Two-component system sensor histidine kinase RstB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13935
symbol: HA48_13935
gene_biotype: protein_coding
description:
  Carboxypeptidase M32; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.


ensembl_gene_id: HA48_13945
symbol: HA48_13945
gene_biotype: protein_coding
description:
  Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1B family.


ensembl_gene_id: HA48_13950
symbol: HA48_13950
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase HrpA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13960
symbol: HA48_13960
gene_biotype: protein_coding
description:
  Amine metabolic protein ydbL; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13965
symbol: HA48_13965
gene_biotype: protein_coding
description:
  YnbE family lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_13975
symbol: HA48_13975
gene_biotype: protein_coding
description:
  Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: HA48_13990
symbol: ttcA
gene_biotype: protein_coding
description:
  tRNA 2-thiocytidine(32) synthetase TtcA; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.


ensembl_gene_id: HA48_13995
symbol: zntB
gene_biotype: protein_coding
description:
  Zinc transporter ZntB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14010
symbol: HA48_14010
gene_biotype: protein_coding
description:
  Two-component sensor histidine kinase; Frameshifted; incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14015
symbol: HA48_14015
gene_biotype: protein_coding
description:
  NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.


ensembl_gene_id: HA48_14030
symbol: HA48_14030
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14035
symbol: HA48_14035
gene_biotype: protein_coding
description:
  Nitrate/sulfonate/bicarbonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14040
symbol: HA48_14040
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14045
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: HA48_14050
symbol: HA48_14050
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14055
symbol: HA48_14055
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein thio; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14070
symbol: ribH-2
gene_biotype: protein_coding
description:
  Riboflavin synthase subunit beta; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family.


ensembl_gene_id: HA48_14075
symbol: HA48_14075
gene_biotype: protein_coding
description:
  Osmotically-inducible lipoprotein B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14090
symbol: HA48_14090
gene_biotype: protein_coding
description:
  Molybdenum ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14125
symbol: HA48_14125
gene_biotype: protein_coding
description:
  RNA polymerase subunit sigma-24; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14135
symbol: HA48_14135
gene_biotype: protein_coding
description:
  N-acetylglucosamine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14145
symbol: HA48_14145
gene_biotype: protein_coding
description:
  Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14160
symbol: HA48_14160
gene_biotype: protein_coding
description:
  Microcystin degradation protein MlrC; Involved in peptidolytic degradation of cyclic heptapeptide hepatotoxin microcystin (MC); Belongs to the peptidase M81 family.


ensembl_gene_id: HA48_14165
symbol: HA48_14165
gene_biotype: protein_coding
description:
  With GsiBCD is involved in glutathione import; GsiA contains 2 ATP-binding domains; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: HA48_14170
symbol: HA48_14170
gene_biotype: protein_coding
description:
  Sugar kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14185
symbol: HA48_14185
gene_biotype: protein_coding
description:
  Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14190
symbol: HA48_14190
gene_biotype: protein_coding
description:
  Carbohydrate kinase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14195
symbol: HA48_14195
gene_biotype: protein_coding
description:
  ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: HA48_14215
symbol: HA48_14215
gene_biotype: protein_coding
description:
  Glutathione-dependent formaldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14225
symbol: HA48_14225
gene_biotype: protein_coding
description:
  FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14235
symbol: HA48_14235
gene_biotype: protein_coding
description:
  Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: HA48_14255
symbol: HA48_14255
gene_biotype: protein_coding
description:
  Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14270
symbol: HA48_14270
gene_biotype: protein_coding
description:
  Member of the SMR family of proton-dependent drug efflux transporters; quaternary ammonium compound efflux pump; confers resistance to cetylpyridinium, cetyldimethylethyl ammonium and cetrimide cations; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14275
symbol: HA48_14275
gene_biotype: protein_coding
description:
  Leucine efflux protein LeuE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14280
symbol: HA48_14280
gene_biotype: protein_coding
description:
  Transcriptional regulator PtsJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14315
symbol: HA48_14315
gene_biotype: protein_coding
description:
  Multidrug efflux RND transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14325
symbol: HA48_14325
gene_biotype: protein_coding
description:
  Bilin biosynthesis protein CpeZ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14340
symbol: HA48_14340
gene_biotype: protein_coding
description:
  Transcriptional regulator CynR; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: HA48_14345
symbol: HA48_14345
gene_biotype: protein_coding
description:
  Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.


ensembl_gene_id: HA48_14350
symbol: cynS
gene_biotype: protein_coding
description:
  Cyanase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.


ensembl_gene_id: HA48_14360
symbol: HA48_14360
gene_biotype: protein_coding
description:
  GMP synthase; Catalyzes the transfer of the ammonia group from glutamine to a new carbon-nitrogen group; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14385
symbol: HA48_14385
gene_biotype: protein_coding
description:
  Phosphosugar isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14390
symbol: HA48_14390
gene_biotype: protein_coding
description:
  Ribulokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14425
symbol: HA48_14425
gene_biotype: protein_coding
description:
  O-acetylserine/cysteine exporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14435
symbol: HA48_14435
gene_biotype: protein_coding
description:
  Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14440
symbol: HA48_14440
gene_biotype: protein_coding
description:
  phytanoyl-CoA dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14490
symbol: HA48_14490
gene_biotype: protein_coding
description:
  Tail protein (tape measure); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14505
symbol: HA48_14505
gene_biotype: protein_coding
description:
  DNA breaking-rejoining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14535
symbol: HA48_14535
gene_biotype: protein_coding
description:
  Phage coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14545
symbol: HA48_14545
gene_biotype: protein_coding
description:
  DUF2213 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14550
symbol: HA48_14550
gene_biotype: protein_coding
description:
  Phage head morphogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14555
symbol: HA48_14555
gene_biotype: protein_coding
description:
  DUF1073 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14565
symbol: HA48_14565
gene_biotype: protein_coding
description:
  Terminase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14595
symbol: HA48_14595
gene_biotype: protein_coding
description:
  Lysozyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14600
symbol: HA48_14600
gene_biotype: protein_coding
description:
  Lysis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14605
symbol: HA48_14605
gene_biotype: protein_coding
description:
  Antiterminator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14620
symbol: HA48_14620
gene_biotype: protein_coding
description:
  Protein NinG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14640
symbol: HA48_14640
gene_biotype: protein_coding
description:
  Protein ninB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14665
symbol: HA48_14665
gene_biotype: protein_coding
description:
  DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14670
symbol: HA48_14670
gene_biotype: protein_coding
description:
  Replication protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14725
symbol: recT
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VIII; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14775
symbol: HA48_14775
gene_biotype: protein_coding
description:
  Excisionase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14785
symbol: rnfB
gene_biotype: protein_coding
description:
  Electron transport complex subunit RsxC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.


ensembl_gene_id: HA48_14790
symbol: rnfA
gene_biotype: protein_coding
description:
  Electron transport complex subunit RsxA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: HA48_14800
symbol: HA48_14800
gene_biotype: protein_coding
description:
  oriC-binding nucleoid-associated protein; YdgT; in E. coli, when complexed with H-NS or StpA binds a 26 base-pair DNA sequence of oriC; seems to play a role in optimizing the activity of oriC; non-essential; Hha protein paralog; in an hha mutant background, cnu is overexpressed and can compensate hha-induced phenotypes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14805
symbol: HA48_14805
gene_biotype: protein_coding
description:
  Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14820
symbol: HA48_14820
gene_biotype: protein_coding
description:
  Sugar ABC transporter permease YjfF; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: HA48_14840
symbol: HA48_14840
gene_biotype: protein_coding
description:
  Sugar ABC transporter substrate-binding protein; With AraGH is involved in the transport of arabinose into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14845
symbol: araG
gene_biotype: protein_coding
description:
  L-arabinose ABC transporter ATP-binding protein AraG; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family.


ensembl_gene_id: HA48_14850
symbol: HA48_14850
gene_biotype: protein_coding
description:
  L-arabinose ABC transporter permease AraH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: HA48_14855
symbol: HA48_14855
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator AraC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14865
symbol: add
gene_biotype: protein_coding
description:
  Adenosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. Adenosine deaminase subfamily.


ensembl_gene_id: HA48_14870
symbol: HA48_14870
gene_biotype: protein_coding
description:
  Transcriptional regulator; Catalyzes the formation of homocysteine and pyruvate from cystathionine; also acts a a negative regulator for the mal regulon but interacting with the transcriptional activator MalT; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14875
symbol: HA48_14875
gene_biotype: protein_coding
description:
  PTS sugar transporter subunit IIBC; Phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS); catalyzes the phosphorylation of maltose and glucose concomitant with their translocation across the cell membrane; component IIB catalyzes the phosphorylation of the sugar molecule; IIC forms the translocation channel and contains the substrate specific binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14880
symbol: HA48_14880
gene_biotype: protein_coding
description:
  Mal regulon transcriptional regulator MalI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14890
symbol: HA48_14890
gene_biotype: protein_coding
description:
  Mannose-6-phosphate isomerase; Catalyzes the formation of of fructose 6-phosphate from mannose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mannose-6-phosphate isomerase type 1 family.


ensembl_gene_id: HA48_14895
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: HA48_14900
symbol: tus
gene_biotype: protein_coding
description:
  DNA replication terminus site-binding protein; Trans-acting protein required for termination of DNA replication. Binds to DNA replication terminator sequences (terA to terF) to prevent the passage of replication forks. The termination efficiency will be affected by the affinity of this protein for the terminator sequence; Belongs to the Tus family.


ensembl_gene_id: HA48_14935
symbol: HA48_14935
gene_biotype: protein_coding
description:
  Barstar, RNAse (barnase) inhibitor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14945
symbol: HA48_14945
gene_biotype: protein_coding
description:
  Virulence factor SrfB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14955
symbol: HA48_14955
gene_biotype: protein_coding
description:
  Hypothetical protein; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14960
symbol: HA48_14960
gene_biotype: protein_coding
description:
  Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14965
symbol: HA48_14965
gene_biotype: protein_coding
description:
  2-nitropropane dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_14995
symbol: HA48_14995
gene_biotype: protein_coding
description:
  Sarcosine oxidase subunit alpha; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15005
symbol: glyA
gene_biotype: protein_coding
description:
  Sarcosine oxidase subunit beta; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: HA48_15040
symbol: HA48_15040
gene_biotype: protein_coding
description:
  Amidase; Catalyzes the hydrolysis of a monocarboxylic acid amid to form a monocarboxylate and ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the amidase family.


ensembl_gene_id: HA48_15060
symbol: HA48_15060
gene_biotype: protein_coding
description:
  PTS cellobiose/arbutin/salicin transporter subunit IIBC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15090
symbol: HA48_15090
gene_biotype: protein_coding
description:
  UV damage endonuclease UvsE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15095
symbol: HA48_15095
gene_biotype: protein_coding
description:
  High-affinity choline transporter BetT; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BCCT transporter (TC 2.A.15) family.


ensembl_gene_id: HA48_15105
symbol: betB
gene_biotype: protein_coding
description:
  Betaine-aldehyde dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid.


ensembl_gene_id: HA48_15110
symbol: betA
gene_biotype: protein_coding
description:
  Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.


ensembl_gene_id: HA48_15145
symbol: fis
gene_biotype: protein_coding
description:
  Fis family transcriptional regulator; Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters; Belongs to the transcriptional regulatory Fis family.


ensembl_gene_id: HA48_15150
symbol: dusB
gene_biotype: protein_coding
description:
  tRNA dihydrouridine synthase DusB; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the Dus family. DusB subfamily.


ensembl_gene_id: HA48_15155
symbol: HA48_15155
gene_biotype: protein_coding
description:
  Carbonic anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15160
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: HA48_15165
symbol: HA48_15165
gene_biotype: protein_coding
description:
  Sodium/panthothenate symporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: HA48_15175
symbol: HA48_15175
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: HA48_15180
symbol: HA48_15180
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: HA48_15185
symbol: aroQ
gene_biotype: protein_coding
description:
  Type II 3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: HA48_15190
symbol: msrQ
gene_biotype: protein_coding
description:
  Sulfoxide reductase heme-binding subunit YedZ; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalyti [...]


ensembl_gene_id: HA48_15195
symbol: msrP
gene_biotype: protein_coding
description:
  Mononuclear molybdenum enzyme YedY; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. The catalytic subunit MsrP is non-stereospecific, being able to reduce bot [...]


ensembl_gene_id: HA48_15200
symbol: HA48_15200
gene_biotype: protein_coding
description:
  RNase E specificity factor CsrD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15205
symbol: HA48_15205
gene_biotype: protein_coding
description:
  Rod shape-determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15215
symbol: HA48_15215
gene_biotype: protein_coding
description:
  Rod shape-determining protein MreD; Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins. Belongs to the MreD family.


ensembl_gene_id: HA48_15220
symbol: HA48_15220
gene_biotype: protein_coding
description:
  Septum formation inhibitor Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: HA48_15225
symbol: HA48_15225
gene_biotype: protein_coding
description:
  Ribonuclease E/G; Involved in the processing of the 5'end of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15230
symbol: HA48_15230
gene_biotype: protein_coding
description:
  TIGR02099 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15235
symbol: HA48_15235
gene_biotype: protein_coding
description:
  Metalloprotease TldD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15245
symbol: aaeX
gene_biotype: protein_coding
description:
  Transcriptional regulator; For aaeXAB operon; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15250
symbol: aaeA
gene_biotype: protein_coding
description:
  Efflux transporter periplasmic adaptor subunit; Forms an efflux pump with AaeB; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: HA48_15255
symbol: aaeB
gene_biotype: protein_coding
description:
  P-hydroxybenzoic acid efflux pump subunit AaeB; Forms an efflux pump with AaeA. Could function as a metabolic relief valve, allowing to eliminate certain compounds when they accumulate to high levels in the cell; Belongs to the aromatic acid exporter ArAE (TC 2.A.85) family.


ensembl_gene_id: HA48_15260
symbol: gabD
gene_biotype: protein_coding
description:
  Succinate-semialdehyde dehydrogenase (NADP(+)); Catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15295
symbol: HA48_15295
gene_biotype: protein_coding
description:
  Malate dehydrogenase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15300
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: HA48_15310
symbol: orn
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase RsgA; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family.


ensembl_gene_id: HA48_15320
symbol: HA48_15320
gene_biotype: protein_coding
description:
  Cellulose biosynthesis protein BcsC; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.


ensembl_gene_id: HA48_15325
symbol: bcsA
gene_biotype: protein_coding
description:
  UDP-forming cellulose synthase catalytic subunit; Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose.


ensembl_gene_id: HA48_15330
symbol: HA48_15330
gene_biotype: protein_coding
description:
  Cellulose synthase operon protein YhjQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15345
symbol: HA48_15345
gene_biotype: protein_coding
description:
  Cellulose biosynthesis protein BcsE; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15355
symbol: HA48_15355
gene_biotype: protein_coding
description:
  Biofilm formation regulator HmsP; HmsP in Yersinia pestis plays a role in invasion of epithelial cells; the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation; inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15360
symbol: dctA
gene_biotype: protein_coding
description:
  C4-dicarboxylate transporter DctA; Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate across the membrane. Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: HA48_15365
symbol: HA48_15365
gene_biotype: protein_coding
description:
  Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15375
symbol: HA48_15375
gene_biotype: protein_coding
description:
  Ketodeoxygluconokinase; Catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate-6-phosphate from 2-dehydro-3-deoxy-D-gluconate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15380
symbol: HA48_15380
gene_biotype: protein_coding
description:
  Cyclic-guanylate-specific phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15395
symbol: rep
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase Rep; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction.


ensembl_gene_id: HA48_15400
symbol: gppA
gene_biotype: protein_coding
description:
  Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase; Catalyzes the conversion of pppGpp to ppGpp. Guanosine pentaphosphate (pppGpp) is a cytoplasmic signaling molecule which together with ppGpp controls the 'stringent response', an adaptive process that allows bacteria to respond to amino acid starvation, resulting in the coordinated regulation of numerous cellular activities.


ensembl_gene_id: HA48_15410
symbol: HA48_15410
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase RhlB; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thioredoxin family.


ensembl_gene_id: HA48_15415
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: HA48_15420
symbol: wecA
gene_biotype: protein_coding
description:
  Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase; Catalyzes the transfer of the GlcNAc-1-phosphate moiety from UDP-GlcNAc onto the carrier lipid undecaprenyl phosphate (C55-P), yielding GlcNAc-pyrophosphoryl-undecaprenyl (GlcNAc-PP-C55).


ensembl_gene_id: HA48_15425
symbol: wzzE
gene_biotype: protein_coding
description:
  Polysaccharide chain length modulation protein; Modulates the polysaccharide chain length of enterobacterial common antigen (ECA); Belongs to the WzzB/Cld/Rol family.


ensembl_gene_id: HA48_15430
symbol: wecB
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase; Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) and thereby provides bacteria with UDP- N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues.


ensembl_gene_id: HA48_15435
symbol: wecC
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-mannosamine dehydrogenase; Catalyzes the four-electron oxidation of UDP-N-acetyl-D- mannosamine (UDP-ManNAc), reducing NAD(+) and releasing UDP-N- acetylmannosaminuronic acid (UDP-ManNAcA); Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. WecC subfamily.


ensembl_gene_id: HA48_15450
symbol: wecD
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the acetylation of dTDP-fucosamine (dTDP-4-amino- 4,6-dideoxy-D-galactose) to dTDP-Fuc4NAc, which is utilized in the biosynthesis of the enterobacterial common antigen (ECA). Belongs to the WecD family.


ensembl_gene_id: HA48_15455
symbol: wecE
gene_biotype: protein_coding
description:
  dTDP-4-amino-4,6-dideoxygalactose transaminase; Catalyzes the synthesis of dTDP-4-amino-4,6-dideoxy-D- galactose (dTDP-Fuc4N) from dTDP-4-keto-6-deoxy-D-glucose (dTDP-D- Glc4O) and L-glutamate; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: HA48_15460
symbol: wzxE
gene_biotype: protein_coding
description:
  O-antigen translocase; Mediates the transbilayer movement of Und-PP-GlcNAc-ManNAcA- Fuc4NAc (lipid III) from the inner to the outer leaflet of the cytoplasmic membrane during the assembly of enterobacterial common antigen (ECA); Belongs to the polysaccharide transport (PST) (TC 2.A.66.2) family.


ensembl_gene_id: HA48_15465
symbol: wecF
gene_biotype: protein_coding
description:
  4-alpha-L-fucosyltransferase; Catalyzes the synthesis of Und-PP-GlcNAc-ManNAcA-Fuc4NAc (Lipid III), the third lipid-linked intermediate involved in ECA synthesis; Belongs to the glycosyltransferase 56 family.


ensembl_gene_id: HA48_15470
symbol: wzyE
gene_biotype: protein_coding
description:
  Enterobacterial common antigen polymerase; Probably involved in the polymerization of enterobacterial common antigen (ECA) trisaccharide repeat units; Belongs to the WzyE family.


ensembl_gene_id: HA48_15475
symbol: wecG
gene_biotype: protein_coding
description:
  Lipopolysaccharide N-acetylmannosaminouronosyltransferase; Catalyzes the synthesis of Und-PP-GlcNAc-ManNAcA (Lipid II), the second lipid-linked intermediate involved in enterobacterial common antigen (ECA) synthesis.


ensembl_gene_id: HA48_15515
symbol: HA48_15515
gene_biotype: protein_coding
description:
  Mobilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15550
symbol: HA48_15550
gene_biotype: protein_coding
description:
  Integrase; Frameshifted; internal stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15560
symbol: HA48_15560
gene_biotype: protein_coding
description:
  Nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15570
symbol: HA48_15570
gene_biotype: protein_coding
description:
  PIN domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15575
symbol: HA48_15575
gene_biotype: protein_coding
description:
  Recombinase Cre; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.


ensembl_gene_id: HA48_15630
symbol: HA48_15630
gene_biotype: protein_coding
description:
  Ethyl tert-butyl ether degradation protein EthD; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15675
symbol: HA48_15675
gene_biotype: protein_coding
description:
  RNA polymerase subunit sigma; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15680
symbol: HA48_15680
gene_biotype: protein_coding
description:
  EscV/YscV/HrcV family type III secretion system export apparatus protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15685
symbol: HA48_15685
gene_biotype: protein_coding
description:
  Type III secretion protein HrpQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15700
symbol: HA48_15700
gene_biotype: protein_coding
description:
  Methyl-accepting chemotaxis protein II; Serine sensor receptor; incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15705
symbol: HA48_15705
gene_biotype: protein_coding
description:
  Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15710
symbol: HA48_15710
gene_biotype: protein_coding
description:
  Flagellar motor protein MotB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15715
symbol: HA48_15715
gene_biotype: protein_coding
description:
  Flagellar motor stator protein MotA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15720
symbol: flhC
gene_biotype: protein_coding
description:
  Transcriptional regulator FlhC; Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhC family.


ensembl_gene_id: HA48_15725
symbol: flhD
gene_biotype: protein_coding
description:
  Flagellar transcriptional activator FlhD; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhD family.


ensembl_gene_id: HA48_15730
symbol: HA48_15730
gene_biotype: protein_coding
description:
  Alpha,alpha-trehalose-phosphate synthase; Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-alpha-D- glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose- 6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor; Belongs to the glycosyltransferase 20 family.


ensembl_gene_id: HA48_15740
symbol: HA48_15740
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S24 family.


ensembl_gene_id: HA48_15770
symbol: HA48_15770
gene_biotype: protein_coding
description:
  Phosphoketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15785
symbol: HA48_15785
gene_biotype: protein_coding
description:
  Mn-containing catalase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15805
symbol: HA48_15805
gene_biotype: protein_coding
description:
  Two-component-system connector protein AriR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15835
symbol: HA48_15835
gene_biotype: protein_coding
description:
  Competence protein ComA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.


ensembl_gene_id: HA48_15840
symbol: HA48_15840
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0324 family.


ensembl_gene_id: HA48_15845
symbol: HA48_15845
gene_biotype: protein_coding
description:
  DNA polymerase V subunit UmuC; Binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15850
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: HA48_15855
symbol: HA48_15855
gene_biotype: protein_coding
description:
  Two-component system sensor histidine kinase DcuS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15860
symbol: HA48_15860
gene_biotype: protein_coding
description:
  Two-component system response regulator DcuR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15865
symbol: HA48_15865
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.


ensembl_gene_id: HA48_15875
symbol: HA48_15875
gene_biotype: protein_coding
description:
  Anion permease; Involved in the transport of citrate into the cell along with the export of succinate out of the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15880
symbol: HA48_15880
gene_biotype: protein_coding
description:
  Fumarate hydratase; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.


ensembl_gene_id: HA48_15895
symbol: HA48_15895
gene_biotype: protein_coding
description:
  GMP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15910
symbol: recO
gene_biotype: protein_coding
description:
  DNA repair protein RecO; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: HA48_15915
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: HA48_15920
symbol: HA48_15920
gene_biotype: protein_coding
description:
  S26 family signal peptidase; Catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S26 family.


ensembl_gene_id: HA48_15925
symbol: lepA
gene_biotype: protein_coding
description:
  Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: HA48_15930
symbol: HA48_15930
gene_biotype: protein_coding
description:
  SoxR reducing system protein RseC; Involved in the reduction of the SoxR iron-sulfur cluster; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15935
symbol: HA48_15935
gene_biotype: protein_coding
description:
  sigma-E factor regulatory protein RseB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_15940
symbol: HA48_15940
gene_biotype: protein_coding
description:
  Anti-sigma factor; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading [...]


ensembl_gene_id: HA48_15945
symbol: HA48_15945
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor RpoE; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: HA48_15955
symbol: HA48_15955
gene_biotype: protein_coding
description:
  L-aspartate oxidase; Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC).


ensembl_gene_id: HA48_15960
symbol: srmB
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase SrmB; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit at low temperature. Exhibits RNA-stimulated ATP hydrolysis and RNA unwinding activity; Belongs to the DEAD box helicase family. SrmB subfamily.


ensembl_gene_id: HA48_15965
symbol: grcA
gene_biotype: protein_coding
description:
  Autonomous glycyl radical cofactor GrcA; Acts as a radical domain for damaged PFL and possibly other radical proteins.


ensembl_gene_id: HA48_15975
symbol: grpE
gene_biotype: protein_coding
description:
  uracil-DNA glycosylase; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-d [...]


ensembl_gene_id: HA48_15980
symbol: nadK
gene_biotype: protein_coding
description:
  NAD(+) kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: HA48_15990
symbol: bamE
gene_biotype: protein_coding
description:
  Outer membrane protein assembly factor BamE; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: HA48_15995
symbol: HA48_15995
gene_biotype: protein_coding
description:
  RnfH family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0125 (RnfH) family.


ensembl_gene_id: HA48_16000
symbol: HA48_16000
gene_biotype: protein_coding
description:
  Ubiquinone-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16015
symbol: ssrA
gene_biotype: protein_coding
description:
  Transfer-messenger RNA; Derived by automated computational analysis using gene prediction method: cmsearch; Belongs to the 'phage' integrase family.


ensembl_gene_id: HA48_16020
symbol: HA48_16020
gene_biotype: protein_coding
description:
  Guanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16065
symbol: HA48_16065
gene_biotype: protein_coding
description:
  DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16085
symbol: queH
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: HA48_16095
symbol: HA48_16095
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16115
symbol: HA48_16115
gene_biotype: protein_coding
description:
  Peptide ABC transporter permease; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RecO family.


ensembl_gene_id: HA48_16120
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: HA48_16125
symbol: acpS
gene_biotype: protein_coding
description:
  holo-ACP synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: HA48_16145
symbol: HA48_16145
gene_biotype: protein_coding
description:
  Acid phosphatase AphA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16150
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA adenosine(34) deaminase TadA; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: HA48_16155
symbol: mltF
gene_biotype: protein_coding
description:
  Lytic transglycosylase F; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella.


ensembl_gene_id: HA48_16160
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.


ensembl_gene_id: HA48_16165
symbol: HA48_16165
gene_biotype: protein_coding
description:
  Two-component sensor histidine kinase; Part of the GlrKR two-component signal transduction system involved in the regulation of glmY; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16175
symbol: HA48_16175
gene_biotype: protein_coding
description:
  Two-component system response regulator GlrR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16185
symbol: hmp
gene_biotype: protein_coding
description:
  Nitric oxide dioxygenase; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily.


ensembl_gene_id: HA48_16200
symbol: HA48_16200
gene_biotype: protein_coding
description:
  3-phenylpropionic acid transporter; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16220
symbol: HA48_16220
gene_biotype: protein_coding
description:
  Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the inositol monophosphatase superfamily.


ensembl_gene_id: HA48_16225
symbol: trmJ-2
gene_biotype: protein_coding
description:
  tRNA (cytosine(32)/uridine(32)-2'-O)-methyltransferase TrmJ; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: HA48_16230
symbol: iscR
gene_biotype: protein_coding
description:
  Fe-S cluster assembly transcriptional regulator IscR; Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins.


ensembl_gene_id: HA48_16235
symbol: iscS
gene_biotype: protein_coding
description:
  IscS subfamily cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.


ensembl_gene_id: HA48_16245
symbol: HA48_16245
gene_biotype: protein_coding
description:
  Enhanced serine sensitivity protein SseB; Enhances serine sensitivity caused by inhibition of homoserine dehydrogenase I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16250
symbol: HA48_16250
gene_biotype: protein_coding
description:
  3-mercaptopyruvate sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16265
symbol: ndk
gene_biotype: protein_coding
description:
  Penicillin-binding protein 1C; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: HA48_16270
symbol: rlmN
gene_biotype: protein_coding
description:
  Dual-specificity RNA methyltransferase RlmN; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: HA48_16275
symbol: HA48_16275
gene_biotype: protein_coding
description:
  Type IV pilus biogenesis/stability protein PilW; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16285
symbol: lsrG
gene_biotype: protein_coding
description:
  Helix-turn-helix domain-containing protein; Involved in the degradation of phospho-AI-2, thereby terminating induction of the lsr operon and closing the AI-2 signaling cycle. Catalyzes the conversion of (4S)-4-hydroxy-5- phosphonooxypentane-2,3-dione (P-DPD) to 3-hydroxy-5- phosphonooxypentane-2,4-dione (P-HPD); Belongs to the LsrG family.


ensembl_gene_id: HA48_16290
symbol: HA48_16290
gene_biotype: protein_coding
description:
  Involved in autoinducer 2 transport and processing; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16295
symbol: HA48_16295
gene_biotype: protein_coding
description:
  Autoinducer 2 ABC transporter substrate-binding protein; With lsrACD is involved in the transport of autoinducer 2 into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16300
symbol: HA48_16300
gene_biotype: protein_coding
description:
  With IsrABC is involved with autoinducer 2 import; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: HA48_16305
symbol: HA48_16305
gene_biotype: protein_coding
description:
  Autoinducer 2 ABC transporter permease LsrC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: HA48_16310
symbol: HA48_16310
gene_biotype: protein_coding
description:
  Autoinducer 2 ABC transporter ATP-binding protein LsrA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16315
symbol: HA48_16315
gene_biotype: protein_coding
description:
  Transcriptional regulator LsrR; Regulates the transcription of lsr genes; involved in autoinducer 2 uptake, biofilm formation and stress responses; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16320
symbol: lsrK
gene_biotype: protein_coding
description:
  Autoinducer-2 kinase; Catalyzes the phosphorylation of autoinducer-2 (AI-2) to phospho-AI-2, which subsequently inactivates the transcriptional regulator LsrR and leads to the transcription of the lsr operon. Phosphorylates the ring-open form of (S)-4,5-dihydroxypentane-2,3-dione (DPD), which is the precursor to all AI-2 signaling molecules, at the C5 position.


ensembl_gene_id: HA48_16325
symbol: HA48_16325
gene_biotype: protein_coding
description:
  Fe2+-dependent dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16330
symbol: HA48_16330
gene_biotype: protein_coding
description:
  Catecholate siderophore receptor Fiu; Fiu; YbiL; porin involved in the uptake of iron complexed with catecholate siderophores (e.g. dihydroxybenzoylserine, dihydroxybenzoate) and beta lactam agents; Fiu interacts with TonB which provides the energy required for transport across the outer membrane; acts as a receptor for iron-siderophores and microcins E492, M, and H47; outer membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16335
symbol: HA48_16335
gene_biotype: protein_coding
description:
  FMN/FAD transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16350
symbol: HA48_16350
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: HA48_16360
symbol: HA48_16360
gene_biotype: protein_coding
description:
  LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16370
symbol: HA48_16370
gene_biotype: protein_coding
description:
  AMP nucleosidase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16375
symbol: HA48_16375
gene_biotype: protein_coding
description:
  HNH endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16385
symbol: HA48_16385
gene_biotype: protein_coding
description:
  Guanine permease; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16395
symbol: HA48_16395
gene_biotype: protein_coding
description:
  D-lyxose/D-mannose family sugar isomerase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16405
symbol: rbsA-2
gene_biotype: protein_coding
description:
  Ribose ABC transporter permease; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.


ensembl_gene_id: HA48_16410
symbol: HA48_16410
gene_biotype: protein_coding
description:
  Hybrid sensor histidine kinase/response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16415
symbol: HA48_16415
gene_biotype: protein_coding
description:
  Phosphonate ABC transporter, permease protein PhnE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16425
symbol: HA48_16425
gene_biotype: protein_coding
description:
  Phosphonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16430
symbol: phnC
gene_biotype: protein_coding
description:
  Phosphonate ABC transporter ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.


ensembl_gene_id: HA48_16435
symbol: HA48_16435
gene_biotype: protein_coding
description:
  Phosphonate metabolism protein PhnP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16440
symbol: phnN
gene_biotype: protein_coding
description:
  Ribose 1,5-bisphosphate phosphokinase PhnN; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP).


ensembl_gene_id: HA48_16450
symbol: HA48_16450
gene_biotype: protein_coding
description:
  Long-chain fatty acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16465
symbol: HA48_16465
gene_biotype: protein_coding
description:
  Multifunctional fatty acid oxidation complex subunit alpha; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: HA48_16470
symbol: HA48_16470
gene_biotype: protein_coding
description:
  Phosphohistidine phosphatase SixA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16475
symbol: HA48_16475
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0115 family.


ensembl_gene_id: HA48_16480
symbol: prmB
gene_biotype: protein_coding
description:
  Ribosomal protein L3 N(5)-glutamine methyltransferase; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily.


ensembl_gene_id: HA48_16485
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: HA48_16490
symbol: HA48_16490
gene_biotype: protein_coding
description:
  Penicillin-insensitive murein endopeptidase; Murein endopeptidase that cleaves the D-alanyl-meso-2,6- diamino-pimelyl amide bond that connects peptidoglycan strands. Likely plays a role in the removal of murein from the sacculus.


ensembl_gene_id: HA48_16500
symbol: HA48_16500
gene_biotype: protein_coding
description:
  Elongation factor P hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16510
symbol: mnmC
gene_biotype: protein_coding
description:
  tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.


ensembl_gene_id: HA48_16515
symbol: HA48_16515
gene_biotype: protein_coding
description:
  Beta-ketoacyl-[acyl-carrier-protein] synthase I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: HA48_16530
symbol: HA48_16530
gene_biotype: protein_coding
description:
  Flagella biosynthesis regulator; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16540
symbol: HA48_16540
gene_biotype: protein_coding
description:
  Tricarboxylic transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16545
symbol: HA48_16545
gene_biotype: protein_coding
description:
  DNA-binding response regulator; Transcriptional activator of tricarboxylate transport system genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16555
symbol: HA48_16555
gene_biotype: protein_coding
description:
  Histidine kinase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16560
symbol: HA48_16560
gene_biotype: protein_coding
description:
  Multidrug DMT transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16570
symbol: pdxB
gene_biotype: protein_coding
description:
  AraC family transcriptional regulator; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate.


ensembl_gene_id: HA48_16575
symbol: HA48_16575
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: HA48_16580
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine(38-40) synthase TruA; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: HA48_16590
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: HA48_16595
symbol: HA48_16595
gene_biotype: protein_coding
description:
  Bifunctional tetrahydrofolate synthase/dihydrofolate synthase; Functions in two distinct reactions of the de novo folate biosynthetic pathway. Catalyzes the addition of a glutamate residue to dihydropteroate (7,8-dihydropteroate or H2Pte) to form dihydrofolate (7,8-dihydrofolate monoglutamate or H2Pte-Glu). Also catalyzes successive additions of L-glutamate to tetrahydrofolate or 10- formyltetrahydrofolate or 5,10-methylenetetrahydrofolate, leading to folylpolyglutamate derivatives.


ensembl_gene_id: HA48_16605
symbol: HA48_16605
gene_biotype: protein_coding
description:
  Cell division protein DedD; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16610
symbol: HA48_16610
gene_biotype: protein_coding
description:
  SfnB family sulfur acquisition oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16635
symbol: fbpC
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.


ensembl_gene_id: HA48_16655
symbol: HA48_16655
gene_biotype: protein_coding
description:
  LacI family transcriptional regulator; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16665
symbol: HA48_16665
gene_biotype: protein_coding
description:
  Citrate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16670
symbol: HA48_16670
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: HA48_16675
symbol: HA48_16675
gene_biotype: protein_coding
description:
  arpA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16690
symbol: HA48_16690
gene_biotype: protein_coding
description:
  DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the histone-like protein H-NS family.


ensembl_gene_id: HA48_16700
symbol: HA48_16700
gene_biotype: protein_coding
description:
  Nitrilotriacetate monooxygenase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16720
symbol: HA48_16720
gene_biotype: protein_coding
description:
  2-methylcitrate dehydratase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16735
symbol: HA48_16735
gene_biotype: protein_coding
description:
  Amine oxidase; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: HA48_16740
symbol: HA48_16740
gene_biotype: protein_coding
description:
  Choline dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16745
symbol: HA48_16745
gene_biotype: protein_coding
description:
  Hydroxyisourate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.


ensembl_gene_id: HA48_16785
symbol: HA48_16785
gene_biotype: protein_coding
description:
  Multidrug MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16795
symbol: HA48_16795
gene_biotype: protein_coding
description:
  Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.


ensembl_gene_id: HA48_16800
symbol: HA48_16800
gene_biotype: protein_coding
description:
  MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16810
symbol: malG
gene_biotype: protein_coding
description:
  Maltose transporter permease; With MalKFE is involved in the transport of maltose into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16815
symbol: HA48_16815
gene_biotype: protein_coding
description:
  Maltose ABC transporter permease MalF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16820
symbol: HA48_16820
gene_biotype: protein_coding
description:
  Maltose ABC transporter substrate-binding protein MalE; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Binds maltose and higher maltodextrins. Belongs to the bacterial solute-binding protein 1 family.


ensembl_gene_id: HA48_16825
symbol: malK
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Part of the ABC transporter complex MalEFGK involved in maltose/maltodextrin import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Maltooligosaccharide importer (TC 3.A.1.1.1) family.


ensembl_gene_id: HA48_16830
symbol: lamB
gene_biotype: protein_coding
description:
  Maltoporin; Involved in the transport of maltose and maltodextrins. Belongs to the porin LamB (TC 1.B.3) family.


ensembl_gene_id: HA48_16840
symbol: HA48_16840
gene_biotype: protein_coding
description:
  Maltose regulon protein MalM; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16850
symbol: malT
gene_biotype: protein_coding
description:
  Transcriptional regulator MalT; Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto- oligosaccharides. Specifically binds to the promoter region of its target genes, recognizing a short DNA motif called the MalT box.


ensembl_gene_id: HA48_16865
symbol: HA48_16865
gene_biotype: protein_coding
description:
  Ribosomal protein S6 modification protein; Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6; incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16870
symbol: HA48_16870
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter substrate-binding protein PotF; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.


ensembl_gene_id: HA48_16875
symbol: potG
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: HA48_16880
symbol: HA48_16880
gene_biotype: protein_coding
description:
  Putrescine ABC transporter permease PotH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16885
symbol: HA48_16885
gene_biotype: protein_coding
description:
  Putrescine ABC transporter permease PotI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16895
symbol: rlmC
gene_biotype: protein_coding
description:
  23S rRNA (uracil(747)-C(5))-methyltransferase; Catalyzes the formation of 5-methyl-uridine at position 747 (m5U747) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmC subfamily.


ensembl_gene_id: HA48_16900
symbol: HA48_16900
gene_biotype: protein_coding
description:
  Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: HA48_16905
symbol: artM
gene_biotype: protein_coding
description:
  Arginine transporter permease subunit ArtM; With ArtPQJI acts to transport arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16910
symbol: HA48_16910
gene_biotype: protein_coding
description:
  Arginine transporter permease subunit ArtQ; With ArtPMJI transports arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16920
symbol: HA48_16920
gene_biotype: protein_coding
description:
  Arginine ABC transporter ATP-binding protein ArtP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16925
symbol: HA48_16925
gene_biotype: protein_coding
description:
  Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16930
symbol: HA48_16930
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0145 family.


ensembl_gene_id: HA48_16935
symbol: HA48_16935
gene_biotype: protein_coding
description:
  N-acetylmuramoyl-L-alanine amidase; Catalyzes the cleavage of the bond between muamic acid and l-alanine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16940
symbol: HA48_16940
gene_biotype: protein_coding
description:
  Low-specificity L-threonine aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16945
symbol: HA48_16945
gene_biotype: protein_coding
description:
  Pyruvate oxidase; Catalyzes the formation of acetate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.


ensembl_gene_id: HA48_16955
symbol: HA48_16955
gene_biotype: protein_coding
description:
  ATP-dependent endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16960
symbol: HA48_16960
gene_biotype: protein_coding
description:
  Cold shock domain protein CspD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16965
symbol: clpS
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease adapter ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: HA48_16970
symbol: HA48_16970
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family.


ensembl_gene_id: HA48_16975
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: HA48_16980
symbol: aat
gene_biotype: protein_coding
description:
  leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: HA48_16985
symbol: HA48_16985
gene_biotype: protein_coding
description:
  In Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16990
symbol: HA48_16990
gene_biotype: protein_coding
description:
  Cysteine/glutathione ABC transporter permease/ATP-binding protein CydD; In Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_16995
symbol: HA48_16995
gene_biotype: protein_coding
description:
  Thioredoxin-disulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17000
symbol: HA48_17000
gene_biotype: protein_coding
description:
  Leucine-responsive transcriptional regulator; Mediates a global response to leucine; acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17015
symbol: HA48_17015
gene_biotype: protein_coding
description:
  Diguanylate cyclase; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17020
symbol: HA48_17020
gene_biotype: protein_coding
description:
  L-idonate 5-dehydrogenase; NAD-binding; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17025
symbol: HA48_17025
gene_biotype: protein_coding
description:
  Gluconate 5-dehydrogenase; Involved in the nonphosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: HA48_17035
symbol: HA48_17035
gene_biotype: protein_coding
description:
  Gluconate permease; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17040
symbol: HA48_17040
gene_biotype: protein_coding
description:
  5'-nucleotidase, lipoprotein e(P4) family; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17050
symbol: HA48_17050
gene_biotype: protein_coding
description:
  SulP family transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17060
symbol: ddl-2
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase A; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: HA48_17070
symbol: HA48_17070
gene_biotype: protein_coding
description:
  Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17080
symbol: HA48_17080
gene_biotype: protein_coding
description:
  Type I secretion protein TolC; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17085
symbol: HA48_17085
gene_biotype: protein_coding
description:
  Repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17105
symbol: HA48_17105
gene_biotype: protein_coding
description:
  Replication protein A; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: HA48_17140
symbol: HA48_17140
gene_biotype: protein_coding
description:
  LysB family transcriptional regulator; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17145
symbol: HA48_17145
gene_biotype: protein_coding
description:
  Baseplate assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17160
symbol: HA48_17160
gene_biotype: protein_coding
description:
  Phage tail protein I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17170
symbol: fusA
gene_biotype: protein_coding
description:
  Phage tail protein; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: HA48_17175
symbol: rpsG
gene_biotype: protein_coding
description:
  30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: HA48_17180
symbol: rpsL
gene_biotype: protein_coding
description:
  30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: HA48_17185
symbol: tusB
gene_biotype: protein_coding
description:
  Sulfurtransferase TusB; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions.


ensembl_gene_id: HA48_17190
symbol: HA48_17190
gene_biotype: protein_coding
description:
  Sulfurtransferase TusC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DsrF/TusC family.


ensembl_gene_id: HA48_17195
symbol: tusD
gene_biotype: protein_coding
description:
  Sulfurtransferase TusD; Part of a sulfur-relay system required for 2-thiolation of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE.


ensembl_gene_id: HA48_17205
symbol: HA48_17205
gene_biotype: protein_coding
description:
  FKBP-type peptidyl-prolyl cis-trans isomerase FkpA; Rotamase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17210
symbol: slyX
gene_biotype: protein_coding
description:
  Lysis protein; Required for phi X174 lysis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SlyX family.


ensembl_gene_id: HA48_17225
symbol: kefB
gene_biotype: protein_coding
description:
  Glutathione-regulated potassium-efflux system protein KefB; Pore-forming subunit of a potassium efflux system that confers protection against electrophiles. Catalyzes K(+)/H(+) antiport.


ensembl_gene_id: HA48_17230
symbol: kefG
gene_biotype: protein_coding
description:
  Glutathione-regulated potassium-efflux system ancillary protein KefG; Regulatory subunit of a potassium efflux system that confers protection against electrophiles. Required for full activity of KefB.


ensembl_gene_id: HA48_17240
symbol: HA48_17240
gene_biotype: protein_coding
description:
  Taurine dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17245
symbol: HA48_17245
gene_biotype: protein_coding
description:
  Taurine transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17250
symbol: tauB
gene_biotype: protein_coding
description:
  Taurine transporter ATP-binding subunit; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family.


ensembl_gene_id: HA48_17255
symbol: HA48_17255
gene_biotype: protein_coding
description:
  Taurine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17275
symbol: HA48_17275
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0270 family.


ensembl_gene_id: HA48_17280
symbol: HA48_17280
gene_biotype: protein_coding
description:
  Phosphoribulokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17290
symbol: HA48_17290
gene_biotype: protein_coding
description:
  Transcriptional regulator Crp; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17300
symbol: argD-2
gene_biotype: protein_coding
description:
  Bifunctional succinylornithine transaminase/acetylornithine transaminase; Involved in both the arginine and lysine biosynthetic pathways; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: HA48_17305
symbol: HA48_17305
gene_biotype: protein_coding
description:
  Anthranilate/aminodeoxychorismate synthase component II; TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17325
symbol: HA48_17325
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase A; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: HA48_17330
symbol: tsgA
gene_biotype: protein_coding
description:
  MFS transporter TsgA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17345
symbol: HA48_17345
gene_biotype: protein_coding
description:
  DUF2158 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17360
symbol: HA48_17360
gene_biotype: protein_coding
description:
  Tellurite resistance methyltransferase TehB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17365
symbol: HA48_17365
gene_biotype: protein_coding
description:
  Exopolyphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GppA/Ppx family.


ensembl_gene_id: HA48_17370
symbol: ppk
gene_biotype: protein_coding
description:
  RNA degradosome polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: HA48_17375
symbol: HA48_17375
gene_biotype: protein_coding
description:
  Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17390
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: HA48_17400
symbol: upp
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine cyclo-ligase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: HA48_17405
symbol: HA48_17405
gene_biotype: protein_coding
description:
  Uracil permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17410
symbol: hda
gene_biotype: protein_coding
description:
  DnaA regulatory inactivator Hda; Mediates the interaction of DNA replication inititator protein DnaA with DNA polymerase subunit beta sliding clamp (dnaN). Stimulates hydrolysis of ATP-DnaA to ADP-DnaA, rendering DnaA inactive for reinititation, a process called regulatory inhibition of DnaA or RIDA; Belongs to the DnaA family. HdA subfamily.


ensembl_gene_id: HA48_17415
symbol: HA48_17415
gene_biotype: protein_coding
description:
  Arsenate reductase (glutaredoxin); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17420
symbol: bepA
gene_biotype: protein_coding
description:
  Hypothetical protein; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state.


ensembl_gene_id: HA48_17435
symbol: HA48_17435
gene_biotype: protein_coding
description:
  Sulfur reduction protein DsrE; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17440
symbol: HA48_17440
gene_biotype: protein_coding
description:
  Thioredoxin-dependent thiol peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17445
symbol: HA48_17445
gene_biotype: protein_coding
description:
  Glycine cleavage system transcriptional repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17450
symbol: dapA
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: HA48_17455
symbol: bamC
gene_biotype: protein_coding
description:
  Outer membrane protein assembly factor BamC; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: HA48_17460
symbol: purC
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazolesuccinocarboxamide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SAICAR synthetase family.


ensembl_gene_id: HA48_17480
symbol: HA48_17480
gene_biotype: protein_coding
description:
  Penicillin-binding protein activator LpoB; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: HA48_17485
symbol: HA48_17485
gene_biotype: protein_coding
description:
  Histidine triad nucleotide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17495
symbol: HA48_17495
gene_biotype: protein_coding
description:
  Glycoside hydrolase 105 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17505
symbol: HA48_17505
gene_biotype: protein_coding
description:
  PTS glucose transporter subunit IIBC; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17515
symbol: tmk
gene_biotype: protein_coding
description:
  dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: HA48_17520
symbol: mltG
gene_biotype: protein_coding
description:
  Cell division protein YceG; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: HA48_17525
symbol: HA48_17525
gene_biotype: protein_coding
description:
  Aminodeoxychorismate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17530
symbol: HA48_17530
gene_biotype: protein_coding
description:
  Beta-ketoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: HA48_17540
symbol: fabG
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: HA48_17545
symbol: HA48_17545
gene_biotype: protein_coding
description:
  [acyl-carrier-protein] S-malonyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17550
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: HA48_17555
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: HA48_17565
symbol: HA48_17565
gene_biotype: protein_coding
description:
  Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes 7- methyl-GTP (m(7)GTP). May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids; Belongs to the Maf family. YceF subfamily.


ensembl_gene_id: HA48_17570
symbol: HA48_17570
gene_biotype: protein_coding
description:
  23S rRNA pseudouridine(955/2504/2580) synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: HA48_17575
symbol: rne
gene_biotype: protein_coding
description:
  Ribonuclease E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily.


ensembl_gene_id: HA48_17580
symbol: flgL
gene_biotype: protein_coding
description:
  With FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17585
symbol: flgK
gene_biotype: protein_coding
description:
  Flagellar hook-associated protein FlgK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17595
symbol: flgI
gene_biotype: protein_coding
description:
  Flagellar rod assembly protein/muramidase FlgJ; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: HA48_17600
symbol: flgH
gene_biotype: protein_coding
description:
  Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: HA48_17605
symbol: HA48_17605
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgG; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: HA48_17615
symbol: flgF-2
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgF; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: HA48_17620
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription termination/antitermination protein NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: HA48_17625
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: HA48_17630
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: HA48_17635
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine(55) synthase TruB; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: HA48_17640
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: HA48_17645
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: HA48_17655
symbol: deaD
gene_biotype: protein_coding
description:
  DEAD/DEAH family ATP-dependent RNA helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.


ensembl_gene_id: HA48_17695
symbol: HA48_17695
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0213 family.


ensembl_gene_id: HA48_17700
symbol: HA48_17700
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0306 family.


ensembl_gene_id: HA48_17715
symbol: HA48_17715
gene_biotype: protein_coding
description:
  Hypothetical protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.


ensembl_gene_id: HA48_17720
symbol: HA48_17720
gene_biotype: protein_coding
description:
  Anaerobic ribonucleoside-triphosphate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17725
symbol: HA48_17725
gene_biotype: protein_coding
description:
  beta-N-acetylhexosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17730
symbol: HA48_17730
gene_biotype: protein_coding
description:
  Reactive intermediate/imine deaminase; Has endoribonuclease activity on mRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17735
symbol: pyrI
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase regulatory subunit; Involved in allosteric regulation of aspartate carbamoyltransferase.


ensembl_gene_id: HA48_17740
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: HA48_17750
symbol: HA48_17750
gene_biotype: protein_coding
description:
  Catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway; incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: HA48_17760
symbol: HA48_17760
gene_biotype: protein_coding
description:
  Beta-aspartyl-peptidase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: HA48_17765
symbol: HA48_17765
gene_biotype: protein_coding
description:
  Molybdopterin-synthase adenylyltransferase MoeB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17770
symbol: HA48_17770
gene_biotype: protein_coding
description:
  ABC-F family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17785
symbol: HA48_17785
gene_biotype: protein_coding
description:
  RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17795
symbol: HA48_17795
gene_biotype: protein_coding
description:
  Multidrug export protein EmrA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17800
symbol: HA48_17800
gene_biotype: protein_coding
description:
  Anion transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17805
symbol: HA48_17805
gene_biotype: protein_coding
description:
  Transcriptional regulator MntR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17815
symbol: ompX
gene_biotype: protein_coding
description:
  Outer membrane protein OmpX; OmpX; involved in cell adhesion; forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface; mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17820
symbol: HA48_17820
gene_biotype: protein_coding
description:
  Threonine/homoserine exporter RhtA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17825
symbol: dps
gene_biotype: protein_coding
description:
  DNA starvation/stationary phase protection protein Dps; During stationary phase, binds the chromosome non- specifically, forming a highly ordered and stable dps-DNA co-crystal within which chromosomal DNA is condensed and protected from diverse damages. It protects DNA from oxidative damage by sequestering intracellular Fe(2+) ion and storing it in the form of Fe(3+) oxyhydroxide mineral, which can be released after reduction. One hydrogen peroxide oxidizes two Fe(2+) ions, which prevents hydroxyl radical production by the Fenton reaction; Belongs to the Dps family.


ensembl_gene_id: HA48_17830
symbol: HA48_17830
gene_biotype: protein_coding
description:
  Glutamine ABC transporter substrate-binding protein GlnH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: HA48_17835
symbol: HA48_17835
gene_biotype: protein_coding
description:
  Glutamine ABC transporter permease GlnP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17845
symbol: glnQ
gene_biotype: protein_coding
description:
  Similar to ATP-binding component of ABC transporters; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17850
symbol: rlmF
gene_biotype: protein_coding
description:
  23S rRNA (adenine(1618)-N(6))-methyltransferase; Specifically methylates the adenine in position 1618 of 23S rRNA.


ensembl_gene_id: HA48_17855
symbol: HA48_17855
gene_biotype: protein_coding
description:
  Asp/Glu/hydantoin racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17880
symbol: lplT
gene_biotype: protein_coding
description:
  Bifunctional 2-acylglycerophosphoethanolamine acyltransferase/acyl-ACP synthetase; Catalyzes the facilitated diffusion of 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) into the cell; Belongs to the major facilitator superfamily. LplT (TC 2.A.1.42) family.


ensembl_gene_id: HA48_17885
symbol: HA48_17885
gene_biotype: protein_coding
description:
  NADP(H)-dependent aldo-keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17890
symbol: HA48_17890
gene_biotype: protein_coding
description:
  DUF903 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17900
symbol: mutH
gene_biotype: protein_coding
description:
  DNA mismatch repair endonuclease MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair. Belongs to the MutH family.


ensembl_gene_id: HA48_17905
symbol: rppH
gene_biotype: protein_coding
description:
  RNA pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.


ensembl_gene_id: HA48_17910
symbol: HA48_17910
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate--protein phosphotransferase PtsP; Member of a second PTS chain involved in nitrogen metabolism; PtsP phosphorylates NPr; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: HA48_17920
symbol: thyA
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: HA48_17925
symbol: HA48_17925
gene_biotype: protein_coding
description:
  Prepilin-type N-terminal cleavage/methylation domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17955
symbol: recB
gene_biotype: protein_coding
description:
  Pitrilysin; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades  [...]


ensembl_gene_id: HA48_17960
symbol: recD
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V subunit alpha; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and re [...]


ensembl_gene_id: HA48_17965
symbol: argA
gene_biotype: protein_coding
description:
  Amino-acid N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the acetyltransferase family. ArgA subfamily.


ensembl_gene_id: HA48_17970
symbol: amiC
gene_biotype: protein_coding
description:
  N-acetylmuramoyl-L-alanine amidase; Hydrolyzes the bond between N-acetylmuramic acid and amino acid residues in peptidoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_17975
symbol: gcvT
gene_biotype: protein_coding
description:
  Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine.


ensembl_gene_id: HA48_17980
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: HA48_17985
symbol: gcvP
gene_biotype: protein_coding
description:
  Glycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.


ensembl_gene_id: HA48_17995
symbol: HA48_17995
gene_biotype: protein_coding
description:
  Fimbria A protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18005
symbol: HA48_18005
gene_biotype: protein_coding
description:
  Molecular chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18040
symbol: HA48_18040
gene_biotype: protein_coding
description:
  6-phospho-beta-glucosidase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18045
symbol: HA48_18045
gene_biotype: protein_coding
description:
  Hemolysin III family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18050
symbol: HA48_18050
gene_biotype: protein_coding
description:
  tRNA-modifying protein YgfZ; Folate-binding protein involved in regulating the level of ATP-DnaA and in the modification of some tRNAs. It is probably a key factor in regulatory networks that act via tRNA modification, such as initiation of chromosomal replication; Belongs to the tRNA-modifying YgfZ family.


ensembl_gene_id: HA48_18070
symbol: HA48_18070
gene_biotype: protein_coding
description:
  Flavodoxin FldB; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family.


ensembl_gene_id: HA48_18075
symbol: xerD
gene_biotype: protein_coding
description:
  Site-specific tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Binds cooperatively to specific DNA consensus sequences that are separated from XerC binding sites by a short central region, forming the heterotetrameric XerC-XerD complex that recombines DNA substrates. The complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. In the complex XerD specifical [...]


ensembl_gene_id: HA48_18080
symbol: HA48_18080
gene_biotype: protein_coding
description:
  Bifunctional protein-disulfide isomerase/oxidoreductase DsbC; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.


ensembl_gene_id: HA48_18100
symbol: HA48_18100
gene_biotype: protein_coding
description:
  Lipid kinase YegS; Probably phosphorylates lipids; the in vivo substrate is unknown; Belongs to the diacylglycerol/lipid kinase family. YegS lipid kinase subfamily.


ensembl_gene_id: HA48_18105
symbol: HA48_18105
gene_biotype: protein_coding
description:
  U32 family peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18110
symbol: HA48_18110
gene_biotype: protein_coding
description:
  Two-component system response regulator BaeR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18115
symbol: HA48_18115
gene_biotype: protein_coding
description:
  Two-component system sensor histidine kinase BaeA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18125
symbol: mdtC
gene_biotype: protein_coding
description:
  Multidrug transporter subunit MdtD; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. MdtC subfamily.


ensembl_gene_id: HA48_18135
symbol: mdtA
gene_biotype: protein_coding
description:
  Multidrug transporter subunit MdtB; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: HA48_18150
symbol: HA48_18150
gene_biotype: protein_coding
description:
  Porin; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18155
symbol: HA48_18155
gene_biotype: protein_coding
description:
  Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: HA48_18165
symbol: udk
gene_biotype: protein_coding
description:
  Uridine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18175
symbol: HA48_18175
gene_biotype: protein_coding
description:
  Outer membrane assembly protein AsmA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18180
symbol: HA48_18180
gene_biotype: protein_coding
description:
  Bacterioferritin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18185
symbol: HA48_18185
gene_biotype: protein_coding
description:
  Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.


ensembl_gene_id: HA48_18190
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: HA48_18195
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.


ensembl_gene_id: HA48_18205
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: HA48_18210
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: HA48_18215
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: HA48_18220
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: HA48_18225
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: HA48_18230
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: HA48_18235
symbol: rpmC
gene_biotype: protein_coding
description:
  50S ribosomal protein L29; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uL29 family.


ensembl_gene_id: HA48_18240
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: HA48_18245
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: HA48_18250
symbol: rplX
gene_biotype: protein_coding
description:
  50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: HA48_18255
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: HA48_18260
symbol: rpsN
gene_biotype: protein_coding
description:
  30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: HA48_18265
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: HA48_18270
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: HA48_18275
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: HA48_18280
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: HA48_18285
symbol: rpmD
gene_biotype: protein_coding
description:
  50S ribosomal protein L30; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18290
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: HA48_18295
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: HA48_18300
symbol: rpmJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L36; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL36 family.


ensembl_gene_id: HA48_18305
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: HA48_18310
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: HA48_18315
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: HA48_18320
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: HA48_18325
symbol: rplQ
gene_biotype: protein_coding
description:
  50S ribosomal protein L17; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18335
symbol: HA48_18335
gene_biotype: protein_coding
description:
  Zinc-responsive transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18345
symbol: mscL
gene_biotype: protein_coding
description:
  Large-conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: HA48_18350
symbol: HA48_18350
gene_biotype: protein_coding
description:
  Trk system potassium transport protein TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18360
symbol: fmt
gene_biotype: protein_coding
description:
  16S rRNA (cytosine(967)-C(5))-methyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: HA48_18365
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: HA48_18370
symbol: HA48_18370
gene_biotype: protein_coding
description:
  DNA protecting protein DprA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18375
symbol: smg
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Smg family.


ensembl_gene_id: HA48_18385
symbol: tsaC
gene_biotype: protein_coding
description:
  L-threonylcarbamoyladenylate synthase type 1 TsaC; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-)/CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate.


ensembl_gene_id: HA48_18390
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: HA48_18400
symbol: HA48_18400
gene_biotype: protein_coding
description:
  Gamma carbonic anhydrase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18405
symbol: HA48_18405
gene_biotype: protein_coding
description:
  Adenylosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: HA48_18410
symbol: HA48_18410
gene_biotype: protein_coding
description:
  Two-component system response regulator PhoP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18415
symbol: HA48_18415
gene_biotype: protein_coding
description:
  Sensor protein PhoQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18420
symbol: HA48_18420
gene_biotype: protein_coding
description:
  50S ribosomal protein L16 arginine hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18430
symbol: potA
gene_biotype: protein_coding
description:
  Putrescine/spermidine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.


ensembl_gene_id: HA48_18435
symbol: HA48_18435
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter permease PotB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18440
symbol: HA48_18440
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter permease PotC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18450
symbol: cobB
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter substrate-binding protein PotD; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sirtuin family. Class III subfamily.


ensembl_gene_id: HA48_18455
symbol: HA48_18455
gene_biotype: protein_coding
description:
  Lipoprotein transporter subunit LolE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18465
symbol: lolD
gene_biotype: protein_coding
description:
  Lipoprotein ABC transporter ATP-binding protein LolD; Outer membrane specific; part of transporter complex lolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18480
symbol: HA48_18480
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18500
symbol: HA48_18500
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0227 family.


ensembl_gene_id: HA48_18505
symbol: nagZ
gene_biotype: protein_coding
description:
  beta-N-acetylhexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.


ensembl_gene_id: HA48_18525
symbol: fliI-3
gene_biotype: protein_coding
description:
  Flagellum-specific ATP synthase FliI; Involved in type III protein export during flagellum assembly; incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: HA48_18540
symbol: HA48_18540
gene_biotype: protein_coding
description:
  EscR/YscR/HrcR family type III secretion system export apparatus protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18545
symbol: HA48_18545
gene_biotype: protein_coding
description:
  EscS/YscS/HrcS family type III secretion system export apparatus protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18550
symbol: HA48_18550
gene_biotype: protein_coding
description:
  EscT/YscT/HrcT family type III secretion system export apparatus protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18555
symbol: HA48_18555
gene_biotype: protein_coding
description:
  EscU/YscU/HrcU family type III secretion system export apparatus switch protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18565
symbol: HA48_18565
gene_biotype: protein_coding
description:
  Type III secretion protein HrpT; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18570
symbol: HA48_18570
gene_biotype: protein_coding
description:
  EscC/YscC/HrcC family type III secretion system outer membrane ring protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18590
symbol: HA48_18590
gene_biotype: protein_coding
description:
  EscJ/YscJ/HrcJ family type III secretion inner membrane ring protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18605
symbol: HA48_18605
gene_biotype: protein_coding
description:
  AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18610
symbol: HA48_18610
gene_biotype: protein_coding
description:
  Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18630
symbol: HA48_18630
gene_biotype: protein_coding
description:
  Protein RepA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18635
symbol: HA48_18635
gene_biotype: protein_coding
description:
  Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family.


ensembl_gene_id: HA48_18645
symbol: purH
gene_biotype: protein_coding
description:
  Bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18650
symbol: purD
gene_biotype: protein_coding
description:
  Phosphoribosylamine--glycine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GARS family.


ensembl_gene_id: HA48_18660
symbol: HA48_18660
gene_biotype: protein_coding
description:
  Hypothetical protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: HA48_18670
symbol: nfi
gene_biotype: protein_coding
description:
  Endonuclease V; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA.


ensembl_gene_id: HA48_18675
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: HA48_18680
symbol: nudC
gene_biotype: protein_coding
description:
  NADH pyrophosphatase; Can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH; requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family. NudC subfamily.


ensembl_gene_id: HA48_18685
symbol: rsd
gene_biotype: protein_coding
description:
  anti-RNA polymerase sigma 70 factor; Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase.


ensembl_gene_id: HA48_18690
symbol: thiC
gene_biotype: protein_coding
description:
  Phosphomethylpyrimidine synthase ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.


ensembl_gene_id: HA48_18695
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: HA48_18710
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: HA48_18720
symbol: rplL
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: HA48_18725
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: HA48_18730
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: HA48_18740
symbol: rsmC
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle; Belongs to the methyltransferase superfamily. RsmC family.


ensembl_gene_id: HA48_18745
symbol: HA48_18745
gene_biotype: protein_coding
description:
  DNA polymerase III subunit psi; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown.


ensembl_gene_id: HA48_18750
symbol: HA48_18750
gene_biotype: protein_coding
description:
  Ribosomal-protein-alanine N-acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.


ensembl_gene_id: HA48_18755
symbol: HA48_18755
gene_biotype: protein_coding
description:
  Noncanonical pyrimidine nucleotidase, YjjG family; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18765
symbol: HA48_18765
gene_biotype: protein_coding
description:
  Type VI secretion system-associated lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18795
symbol: HA48_18795
gene_biotype: protein_coding
description:
  Type VI secretion system-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18805
symbol: HA48_18805
gene_biotype: protein_coding
description:
  EvpB family type VI secretion protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18850
symbol: HA48_18850
gene_biotype: protein_coding
description:
  Serine/threonine phosphatase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18860
symbol: HA48_18860
gene_biotype: protein_coding
description:
  Protein of avirulence locus ImpE; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18880
symbol: HA48_18880
gene_biotype: protein_coding
description:
  Phosphoserine phosphatase SerB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18885
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: HA48_18890
symbol: HA48_18890
gene_biotype: protein_coding
description:
  Catalyzes the formation of NAD(+) from nicotinamide ribonucleotide; catalyzes the formation of nicotinamide mononucleotide from nicotinamide riboside; also has a regulatory function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18900
symbol: HA48_18900
gene_biotype: protein_coding
description:
  Energy-dependent translational throttle protein EttA; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: HA48_18905
symbol: HA48_18905
gene_biotype: protein_coding
description:
  DNA-binding transcriptional repressor DeoR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18920
symbol: HA48_18920
gene_biotype: protein_coding
description:
  DUF4432 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18925
symbol: HA48_18925
gene_biotype: protein_coding
description:
  Urea ABC transporter ATP-binding subunit UrtE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18930
symbol: HA48_18930
gene_biotype: protein_coding
description:
  Urea ABC transporter ATP-binding protein UrtD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_18935
symbol: HA48_18935
gene_biotype: protein_coding
description:
  Urea ABC transporter permease subunit UrtC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: HA48_18940
symbol: HA48_18940
gene_biotype: protein_coding
description:
  Urea ABC transporter permease subunit UrtB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: HA48_18950
symbol: HA48_18950
gene_biotype: protein_coding
description:
  Urea ABC transporter substrate-binding protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19000
symbol: HA48_19000
gene_biotype: protein_coding
description:
  Protein iolH; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19010
symbol: HA48_19010
gene_biotype: protein_coding
description:
  Glutathione-dependent disulfide-bond oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19035
symbol: HA48_19035
gene_biotype: protein_coding
description:
  Pyrroloquinoline quinone-dependent dehydrogenase; Quinoprotein glucose dehydrogenase; catalyzes the formation of D-glucono-1,5-lactone from D-glucose and ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19045
symbol: HA48_19045
gene_biotype: protein_coding
description:
  MFS transporter; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: HA48_19050
symbol: HA48_19050
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator RamA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19060
symbol: HA48_19060
gene_biotype: protein_coding
description:
  DNA-binding response regulator; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19085
symbol: HA48_19085
gene_biotype: protein_coding
description:
  DUF4760 domain-containing protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19095
symbol: guaB
gene_biotype: protein_coding
description:
  IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: HA48_19100
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: HA48_19115
symbol: HA48_19115
gene_biotype: protein_coding
description:
  Glucose dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19120
symbol: der
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: HA48_19125
symbol: bamB
gene_biotype: protein_coding
description:
  Outer membrane protein assembly factor BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: HA48_19135
symbol: hisS
gene_biotype: protein_coding
description:
  histidine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19140
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: HA48_19150
symbol: clpB
gene_biotype: protein_coding
description:
  Helix-turn-helix domain-containing protein; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: HA48_19155
symbol: HA48_19155
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the multicopper oxidase YfiH/RL5 family.


ensembl_gene_id: HA48_19160
symbol: HA48_19160
gene_biotype: protein_coding
description:
  23S rRNA pseudouridine(1911/1915/1917) synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: HA48_19165
symbol: bamD
gene_biotype: protein_coding
description:
  Outer membrane protein assembly factor BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamA, the core component of the assembly machinery.


ensembl_gene_id: HA48_19170
symbol: HA48_19170
gene_biotype: protein_coding
description:
  Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19175
symbol: HA48_19175
gene_biotype: protein_coding
description:
  Chorismate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19180
symbol: tyrA
gene_biotype: protein_coding
description:
  Bifunctional chorismate mutase/prephenate dehydrogenase; Catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19190
symbol: HA48_19190
gene_biotype: protein_coding
description:
  Ribosomal-protein-serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19195
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: HA48_19200
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanosine(37)-N1)-methyltransferase TrmD; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: HA48_19210
symbol: rimM
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimM; Essential for efficient processing of 16S rRNA; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family.


ensembl_gene_id: HA48_19215
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual componen [...]


ensembl_gene_id: HA48_19230
symbol: luxS
gene_biotype: protein_coding
description:
  S-ribosylhomocysteine lyase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family.


ensembl_gene_id: HA48_19235
symbol: gshA
gene_biotype: protein_coding
description:
  Glutamate--cysteine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.


ensembl_gene_id: HA48_19245
symbol: HA48_19245
gene_biotype: protein_coding
description:
  Fructose-1-phosphate/6-phosphogluconate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19265
symbol: HA48_19265
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: HA48_19305
symbol: HA48_19305
gene_biotype: protein_coding
description:
  MBL fold hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19315
symbol: HA48_19315
gene_biotype: protein_coding
description:
  NADPH:quinone reductase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19335
symbol: HA48_19335
gene_biotype: protein_coding
description:
  Pyridine nucleotide-disulfide oxidoreductase; Involved in disulfide oxidoreductase activity and electron transport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19350
symbol: HA48_19350
gene_biotype: protein_coding
description:
  Lysogenization regulator HflD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19355
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA 2-thiouridine(34) synthase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln), leading to the formation of s(2)U34, the first step of tRNA-mnm(5)s(2)U34 synthesis. Sulfur is provided by IscS, via a sulfur-relay system. Binds ATP and its substrate tRNAs; Belongs to the MnmA/TRMU family.


ensembl_gene_id: HA48_19360
symbol: nudJ
gene_biotype: protein_coding
description:
  NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family. NudJ subfamily.


ensembl_gene_id: HA48_19365
symbol: HA48_19365
gene_biotype: protein_coding
description:
  23S rRNA pseudouridylate synthase; Catalyzes the formation of pseudouridine from uracil-2457 in 23S ribosomal RNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: HA48_19370
symbol: HA48_19370
gene_biotype: protein_coding
description:
  NADP-dependent isocitrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19385
symbol: HA48_19385
gene_biotype: protein_coding
description:
  CsbD family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family.


ensembl_gene_id: HA48_19410
symbol: HA48_19410
gene_biotype: protein_coding
description:
  Biphenyl 2,3-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19420
symbol: HA48_19420
gene_biotype: protein_coding
description:
  Muramoyltetrapeptide carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19450
symbol: HA48_19450
gene_biotype: protein_coding
description:
  Sugar ABC transporter ATP-binding protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: HA48_19455
symbol: HA48_19455
gene_biotype: protein_coding
description:
  Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19465
symbol: HA48_19465
gene_biotype: protein_coding
description:
  Glycerol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19520
symbol: HA48_19520
gene_biotype: protein_coding
description:
  FAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19565
symbol: HA48_19565
gene_biotype: protein_coding
description:
  Ribosomal protein S6 modification protein; Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6; incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flavin oxidoreductase frp family.


ensembl_gene_id: HA48_19575
symbol: HA48_19575
gene_biotype: protein_coding
description:
  Glutaredoxin; Functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase; also involved in reducing some disulfides in a coupled system with glutathione reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19595
symbol: HA48_19595
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19620
symbol: rimO
gene_biotype: protein_coding
description:
  Carbonic anhydrase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: HA48_19635
symbol: HA48_19635
gene_biotype: protein_coding
description:
  Glutathione ABC transporter permease GsiD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19640
symbol: HA48_19640
gene_biotype: protein_coding
description:
  Glutathione ABC transporter permease GsiC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19645
symbol: HA48_19645
gene_biotype: protein_coding
description:
  Glutathione ABC transporter substrate-binding protein GsiB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19655
symbol: HA48_19655
gene_biotype: protein_coding
description:
  With GsiBCD is involved in glutathione import; GsiA contains 2 ATP-binding domains; incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: HA48_19660
symbol: HA48_19660
gene_biotype: protein_coding
description:
  Colanic acid biosynthesis glycosyltransferase WcaL; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19665
symbol: HA48_19665
gene_biotype: protein_coding
description:
  Colanic acid biosynthesis pyruvyl transferase WcaK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19675
symbol: HA48_19675
gene_biotype: protein_coding
description:
  Amylovoran biosynthesis protein AmsD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19685
symbol: HA48_19685
gene_biotype: protein_coding
description:
  Amylovoran biosynthesis protein AmsB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19695
symbol: HA48_19695
gene_biotype: protein_coding
description:
  Tyrosine-protein kinase; Wzc; catalyzes the autophosphorylation on tyrosine residues which downregulates the biosynthesis of colonic acid (an extracellular polysaccharide); frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: HA48_19700
symbol: HA48_19700
gene_biotype: protein_coding
description:
  Polysaccharide export protein Wza; Required for the translocation of capsular polysaccharide through the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19720
symbol: HA48_19720
gene_biotype: protein_coding
description:
  Homeobox protein YbgS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19730
symbol: gpmA
gene_biotype: protein_coding
description:
  Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.


ensembl_gene_id: HA48_19740
symbol: galK
gene_biotype: protein_coding
description:
  Galactose-1-epimerase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.


ensembl_gene_id: HA48_19745
symbol: HA48_19745
gene_biotype: protein_coding
description:
  Galactose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.


ensembl_gene_id: HA48_19750
symbol: HA48_19750
gene_biotype: protein_coding
description:
  Molybdate ABC transporter ATP-binding protein ModF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19755
symbol: HA48_19755
gene_biotype: protein_coding
description:
  Molybdenum-dependent transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19760
symbol: HA48_19760
gene_biotype: protein_coding
description:
  Molybdate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19765
symbol: modB
gene_biotype: protein_coding
description:
  Molybdate ABC transporter permease; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: HA48_19770
symbol: modC
gene_biotype: protein_coding
description:
  Molybdenum ABC transporter ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family.


ensembl_gene_id: HA48_19775
symbol: HA48_19775
gene_biotype: protein_coding
description:
  Pyridoxal phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19785
symbol: HA48_19785
gene_biotype: protein_coding
description:
  6-phosphogluconolactonase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19790
symbol: bioA
gene_biotype: protein_coding
description:
  Adenosylmethionine--8-amino-7-oxononanoate transaminase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.


ensembl_gene_id: HA48_19795
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: HA48_19805
symbol: HA48_19805
gene_biotype: protein_coding
description:
  Cellulose synthase regulator BcsB; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.


ensembl_gene_id: HA48_19810
symbol: HA48_19810
gene_biotype: protein_coding
description:
  Cellulose synthase catalytic subunit (UDP-forming); Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose.


ensembl_gene_id: HA48_19820
symbol: HA48_19820
gene_biotype: protein_coding
description:
  Cellulose biosynthesis protein BcsO; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19825
symbol: HA48_19825
gene_biotype: protein_coding
description:
  Dipeptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: HA48_19835
symbol: HA48_19835
gene_biotype: protein_coding
description:
  Dipeptide ABC transporter permease DppC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19840
symbol: HA48_19840
gene_biotype: protein_coding
description:
  Dipeptide ABC transporter permease DppB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19845
symbol: HA48_19845
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19860
symbol: HA48_19860
gene_biotype: protein_coding
description:
  Hydroxamate siderophore iron reductase FhuF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19865
symbol: HA48_19865
gene_biotype: protein_coding
description:
  cys-tRNA(pro)/cys-tRNA(cys) deacylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19875
symbol: HA48_19875
gene_biotype: protein_coding
description:
  Nucleoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IUNH family.


ensembl_gene_id: HA48_19890
symbol: HA48_19890
gene_biotype: protein_coding
description:
  Histidine phosphatase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19900
symbol: HA48_19900
gene_biotype: protein_coding
description:
  Mannosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19910
symbol: HA48_19910
gene_biotype: protein_coding
description:
  Tautomerase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19915
symbol: HA48_19915
gene_biotype: protein_coding
description:
  Phosphoglycerol transferase I; Catalyzes the transfer of phosphoglycerol to the glucan backbone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19930
symbol: HA48_19930
gene_biotype: protein_coding
description:
  D-erythrulose kinase; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: HA48_19935
symbol: HA48_19935
gene_biotype: protein_coding
description:
  Sugar phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19955
symbol: HA48_19955
gene_biotype: protein_coding
description:
  Catalyzes the synthesis of pseudouridine from U-2604 in the 23S ribosomal RNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: HA48_19960
symbol: HA48_19960
gene_biotype: protein_coding
description:
  NADPH-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flavin oxidoreductase frp family.


ensembl_gene_id: HA48_19965
symbol: HA48_19965
gene_biotype: protein_coding
description:
  Bleomycin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19980
symbol: HA48_19980
gene_biotype: protein_coding
description:
  NADP-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_19985
symbol: HA48_19985
gene_biotype: protein_coding
description:
  6-phosphogluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20005
symbol: ubiG
gene_biotype: protein_coding
description:
  Bifunctional 3-demethylubiquinol 3-O-methyltransferase/2-polyprenyl-6-hydroxyphenol methylase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.


ensembl_gene_id: HA48_20015
symbol: rcsC
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB.


ensembl_gene_id: HA48_20020
symbol: rcsB
gene_biotype: protein_coding
description:
  DNA-binding response regulator; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsB is the response regulator that binds to regulatory DNA regions.


ensembl_gene_id: HA48_20025
symbol: rcsD
gene_biotype: protein_coding
description:
  Phosphotransferase RcsD; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsD is a phosphotransfer intermediate between the sensor kinase RcsC and the response regulator RcsB. It acquires a phosphoryl group from RcsC and transfers it to RcsB.


ensembl_gene_id: HA48_20035
symbol: HA48_20035
gene_biotype: protein_coding
description:
  MFS transporter; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Gram-negative porin family.


ensembl_gene_id: HA48_20040
symbol: HA48_20040
gene_biotype: protein_coding
description:
  FAD:protein FMN transferase ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.


ensembl_gene_id: HA48_20050
symbol: HA48_20050
gene_biotype: protein_coding
description:
  Bifunctional 2-acylglycerophosphoethanolamine acyltransferase/acyl-ACP synthetase; Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1; incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: HA48_20055
symbol: ftsI-2
gene_biotype: protein_coding
description:
  Peptidoglycan synthase; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum.


ensembl_gene_id: HA48_20065
symbol: HA48_20065
gene_biotype: protein_coding
description:
  Biotin transporter BioY; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: HA48_20070
symbol: HA48_20070
gene_biotype: protein_coding
description:
  Transcriptional regulator GalR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20080
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: HA48_20100
symbol: lysS
gene_biotype: protein_coding
description:
  lysine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: HA48_20105
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: HA48_20110
symbol: HA48_20110
gene_biotype: protein_coding
description:
  Fe-S-binding ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20120
symbol: HA48_20120
gene_biotype: protein_coding
description:
  Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.


ensembl_gene_id: HA48_20125
symbol: HA48_20125
gene_biotype: protein_coding
description:
  Alkyl hydroperoxide reductase subunit F; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20135
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: HA48_20140
symbol: HA48_20140
gene_biotype: protein_coding
description:
  Bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20150
symbol: HA48_20150
gene_biotype: protein_coding
description:
  Fructuronate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mannitol dehydrogenase family.


ensembl_gene_id: HA48_20160
symbol: HA48_20160
gene_biotype: protein_coding
description:
  Zn-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20180
symbol: HA48_20180
gene_biotype: protein_coding
description:
  Molybdopterin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20195
symbol: HA48_20195
gene_biotype: protein_coding
description:
  Ectoine/hydroxyectoine ABC transporter ATP-binding protein EhuA; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20215
symbol: HA48_20215
gene_biotype: protein_coding
description:
  Myo-inosose-2 dehydratase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20220
symbol: HA48_20220
gene_biotype: protein_coding
description:
  Addiction module antidote protein, HigA family; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20225
symbol: HA48_20225
gene_biotype: protein_coding
description:
  Killer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20235
symbol: HA48_20235
gene_biotype: protein_coding
description:
  Ligand-gated channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20250
symbol: HA48_20250
gene_biotype: protein_coding
description:
  Alpha-hydroxy-acid oxidizing enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20255
symbol: HA48_20255
gene_biotype: protein_coding
description:
  Arylsulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20265
symbol: HA48_20265
gene_biotype: protein_coding
description:
  Tryptophan transporter of high affinity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20270
symbol: HA48_20270
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the amidase family.


ensembl_gene_id: HA48_20280
symbol: HA48_20280
gene_biotype: protein_coding
description:
  Tryptophan 2-monooxygenase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20320
symbol: HA48_20320
gene_biotype: protein_coding
description:
  Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20335
symbol: HA48_20335
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: HA48_20365
symbol: HA48_20365
gene_biotype: protein_coding
description:
  Sensor domain-containing diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20380
symbol: HA48_20380
gene_biotype: protein_coding
description:
  FAD-dependent oxidoreductase; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20390
symbol: HA48_20390
gene_biotype: protein_coding
description:
  Oxidative stress defense protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20395
symbol: argP
gene_biotype: protein_coding
description:
  Transcriptional regulator ArgP; Controls the transcription of genes involved in arginine and lysine metabolism; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: HA48_20400
symbol: rpiA
gene_biotype: protein_coding
description:
  Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.


ensembl_gene_id: HA48_20410
symbol: HA48_20410
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.


ensembl_gene_id: HA48_20420
symbol: zapA
gene_biotype: protein_coding
description:
  Z-ring-associated protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: HA48_20430
symbol: HA48_20430
gene_biotype: protein_coding
description:
  Hypothetical protein; The crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers; function unknown; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20435
symbol: HA48_20435
gene_biotype: protein_coding
description:
  2-octaprenyl-6-methoxyphenyl hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20450
symbol: HA48_20450
gene_biotype: protein_coding
description:
  MFS transporter; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: HA48_20460
symbol: emrB
gene_biotype: protein_coding
description:
  Multidrug MFS transporte; with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.


ensembl_gene_id: HA48_20465
symbol: HA48_20465
gene_biotype: protein_coding
description:
  tRNA/rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: HA48_20470
symbol: HA48_20470
gene_biotype: protein_coding
description:
  Thioredoxin TrxC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thioredoxin family.


ensembl_gene_id: HA48_20475
symbol: HA48_20475
gene_biotype: protein_coding
description:
  DTW domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20480
symbol: HA48_20480
gene_biotype: protein_coding
description:
  Protein acetyltransferase; Catalyzes the acetylation of lysine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20485
symbol: pssA
gene_biotype: protein_coding
description:
  Catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20490
symbol: HA48_20490
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for high salt suppression of motility; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20495
symbol: HA48_20495
gene_biotype: protein_coding
description:
  Alpha-ketoglutarate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20505
symbol: HA48_20505
gene_biotype: protein_coding
description:
  Nitrate/nitrite transporter; Involved in the transport of nitrate and nitrite; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20510
symbol: HA48_20510
gene_biotype: protein_coding
description:
  Nitrate reductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: HA48_20520
symbol: HA48_20520
gene_biotype: protein_coding
description:
  Nitrate reductase subunit beta; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20525
symbol: HA48_20525
gene_biotype: protein_coding
description:
  Respiratory nitrate reductase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20550
symbol: HA48_20550
gene_biotype: protein_coding
description:
  Selenoprotein W-related protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20560
symbol: HA48_20560
gene_biotype: protein_coding
description:
  Hemin-degrading factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20565
symbol: HA48_20565
gene_biotype: protein_coding
description:
  Hemin ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20575
symbol: hmuV
gene_biotype: protein_coding
description:
  Iron ABC transporter; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.


ensembl_gene_id: HA48_20595
symbol: HA48_20595
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: HA48_20610
symbol: HA48_20610
gene_biotype: protein_coding
description:
  4-oxalocrotonate tautomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family.


ensembl_gene_id: HA48_20650
symbol: HA48_20650
gene_biotype: protein_coding
description:
  Peptide ABC transporter ATP-binding protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20655
symbol: HA48_20655
gene_biotype: protein_coding
description:
  Spermidine acetyltransferase; Catalyzes the formation of N(1)- and N(8)-acetylspermidine from spermidine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20665
symbol: HA48_20665
gene_biotype: protein_coding
description:
  Homocysteine S-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20685
symbol: HA48_20685
gene_biotype: protein_coding
description:
  NrdH-redoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20690
symbol: nrdI
gene_biotype: protein_coding
description:
  Ribonucleotide reductase assembly protein NrdI; Probably involved in ribonucleotide reductase function.


ensembl_gene_id: HA48_20695
symbol: HA48_20695
gene_biotype: protein_coding
description:
  Ribonucleotide-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: HA48_20700
symbol: HA48_20700
gene_biotype: protein_coding
description:
  Class 1b ribonucleoside-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.


ensembl_gene_id: HA48_20710
symbol: ycgR
gene_biotype: protein_coding
description:
  Flagellar brake protein; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility.


ensembl_gene_id: HA48_20725
symbol: treA
gene_biotype: protein_coding
description:
  Ferrioxamine B receptor; Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system; Belongs to the glycosyl hydrolase 37 family.


ensembl_gene_id: HA48_20735
symbol: ghrA
gene_biotype: protein_coding
description:
  Bifunctional glyoxylate/hydroxypyruvate reductase A; Catalyzes the formation of glycolate and glycerate from glyoxylate and hydroxypyruvate, respectively; frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PHP family.


ensembl_gene_id: HA48_20755
symbol: HA48_20755
gene_biotype: protein_coding
description:
  Type IV secretion protein Rhs; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: HA48_20760
symbol: HA48_20760
gene_biotype: protein_coding
description:
  Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20765
symbol: HA48_20765
gene_biotype: protein_coding
description:
  Accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20795
symbol: moaD
gene_biotype: protein_coding
description:
  Molybdopterin synthase sulfur carrier subunit; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: HA48_20800
symbol: HA48_20800
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein B; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.


ensembl_gene_id: HA48_20810
symbol: moaA
gene_biotype: protein_coding
description:
  Cyclic pyranopterin phosphate synthase; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.


ensembl_gene_id: HA48_20820
symbol: HA48_20820
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20840
symbol: HA48_20840
gene_biotype: protein_coding
description:
  8-amino-7-oxononanoate synthase; Incomplete; partial in the middle of a contig; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20845
symbol: rbsA-3
gene_biotype: protein_coding
description:
  D-xylose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.


ensembl_gene_id: HA48_20850
symbol: HA48_20850
gene_biotype: protein_coding
description:
  ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: HA48_20855
symbol: HA48_20855
gene_biotype: protein_coding
description:
  Nitrogen assimilation transcriptional regulator; Transcriptional activator for the hut, put and ure operons and repressor for the gdh and gltB operons in response to nitrogen limitation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: HA48_20860
symbol: cbl
gene_biotype: protein_coding
description:
  LysR-type transcriptional regulator similar to CysB; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates two operons consisting of ABC transporters that are part of the cys regulon; regulated by CysB; DNA-binding transcriptional activator for the ssuEADCB and tauABCD operons; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20870
symbol: HA48_20870
gene_biotype: protein_coding
description:
  Histone acetyltransferase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.


ensembl_gene_id: HA48_20885
symbol: HA48_20885
gene_biotype: protein_coding
description:
  DUF2474 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20895
symbol: HA48_20895
gene_biotype: protein_coding
description:
  Cytochrome ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20910
symbol: treF
gene_biotype: protein_coding
description:
  Alpha,alpha-trehalase; Hydrolyzes trehalose to glucose. Could be involved, in cells returning to low osmolarity conditions, in the utilization of the accumulated cytoplasmic trehalose, which was synthesized in response to high osmolarity.


ensembl_gene_id: HA48_20925
symbol: HA48_20925
gene_biotype: protein_coding
description:
  MFS transporter; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: HA48_20930
symbol: HA48_20930
gene_biotype: protein_coding
description:
  Phosphonate C-P lyase system protein PhnL; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20935
symbol: HA48_20935
gene_biotype: protein_coding
description:
  Phosphonate C-P lyase system protein PhnK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20940
symbol: HA48_20940
gene_biotype: protein_coding
description:
  Carbon-phosphorus lyase complex subunit PhnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.


ensembl_gene_id: HA48_20945
symbol: HA48_20945
gene_biotype: protein_coding
description:
  Carbon-phosphorus lyase complex subunit PhnI; Required for the use of phosphonate and phosphite; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20950
symbol: HA48_20950
gene_biotype: protein_coding
description:
  Phosphonate C-P lyase system protein PhnH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20955
symbol: HA48_20955
gene_biotype: protein_coding
description:
  Phosphonate C-P lyase system protein PhnG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20960
symbol: HA48_20960
gene_biotype: protein_coding
description:
  Phosphonate metabolism transcriptional regulator PhnF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20965
symbol: HA48_20965
gene_biotype: protein_coding
description:
  Bifunctional diguanylate cyclase/phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20975
symbol: HA48_20975
gene_biotype: protein_coding
description:
  Phospholipid-binding lipoprotein MlaA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20980
symbol: HA48_20980
gene_biotype: protein_coding
description:
  C-type cytochrome biogenesis protein CcmI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20990
symbol: HA48_20990
gene_biotype: protein_coding
description:
  Thiol:disulfide interchange protein; Cytochrome c-type biogenesis thioredoxin; involved in the reduction of disulfide bonds to allow heme bonding; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_20995
symbol: HA48_20995
gene_biotype: protein_coding
description:
  Cytochrome c-type biogenesis protein; required for the transfer of heme to apocytochrome c; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_21000
symbol: ccmE
gene_biotype: protein_coding
description:
  Cytochrome c biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.


ensembl_gene_id: HA48_21005
symbol: HA48_21005
gene_biotype: protein_coding
description:
  Heme exporter protein CcmD; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family.


ensembl_gene_id: HA48_21010
symbol: ccmC
gene_biotype: protein_coding
description:
  Heme ABC transporter permease; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.


ensembl_gene_id: HA48_21015
symbol: HA48_21015
gene_biotype: protein_coding
description:
  Heme exporter protein CcmB; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family.


ensembl_gene_id: HA48_21020
symbol: ccmA
gene_biotype: protein_coding
description:
  Heme ABC transporter ATP-binding protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.


ensembl_gene_id: HA48_21035
symbol: HA48_21035
gene_biotype: protein_coding
description:
  Protein of avirulence locus ImpE; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_21040
symbol: HA48_21040
gene_biotype: protein_coding
description:
  Type VI secretion system protein ImpG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_21055
symbol: HA48_21055
gene_biotype: protein_coding
description:
  ClpV1 family T6SS ATPase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_21060
symbol: HA48_21060
gene_biotype: protein_coding
description:
  Murein transglycosylase A; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division.


ensembl_gene_id: HA48_21065
symbol: HA48_21065
gene_biotype: protein_coding
description:
  tRNA cyclic N6-threonylcarbamoyladenosine(37) synthase TcdA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_21070
symbol: HA48_21070
gene_biotype: protein_coding
description:
  Cysteine desulfurase, sulfur acceptor subunit CsdE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_21075
symbol: HA48_21075
gene_biotype: protein_coding
description:
  Cysteine sulfinate desulfinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_21090
symbol: HA48_21090
gene_biotype: protein_coding
description:
  Transcriptional regulator GcvA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: HA48_21100
symbol: rlmM
gene_biotype: protein_coding
description:
  23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM; Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily.


ensembl_gene_id: HA48_21115
symbol: HA48_21115
gene_biotype: protein_coding
description:
  Cytochrome C; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_21175
symbol: queG
gene_biotype: protein_coding
description:
  tRNA epoxyqueuosine(34) reductase QueG; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family.


ensembl_gene_id: HA48_21180
symbol: nnrD
gene_biotype: protein_coding
description:
  Bifunctional ADP-dependent (S)-NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-spec [...]


ensembl_gene_id: HA48_21185
symbol: HA48_21185
gene_biotype: protein_coding
description:
  tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_21195
symbol: HA48_21195
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA mismatch repair MutL/HexB family.


ensembl_gene_id: HA48_21210
symbol: clsB
gene_biotype: protein_coding
description:
  Cardiolipin synthase B; Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.


ensembl_gene_id: HA48_21220
symbol: HA48_21220
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BI1 family.


ensembl_gene_id: HA48_21230
symbol: moaE
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoaE; Catalyzes the conversion of molybdopterin precursor Z into molybdopterin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_21240
symbol: moaD-2
gene_biotype: protein_coding
description:
  Molybdopterin synthase sulfur carrier subunit; Catalyzes the conversion of molybdopterin precursor Z into molybdopterin; incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_21255
symbol: HA48_21255
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_21270
symbol: HA48_21270
gene_biotype: protein_coding
description:
  Glycine betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_21275
symbol: HA48_21275
gene_biotype: protein_coding
description:
  Proline/betaine ABC transporter permease ProW; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_21280
symbol: HA48_21280
gene_biotype: protein_coding
description:
  Glycine betaine/L-proline ABC transporter ATP-binding protein; With ProWX is involved in the high-affinity uptake of glycine betaine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_21305
symbol: coaA
gene_biotype: protein_coding
description:
  Type I pantothenate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_21310
symbol: birA
gene_biotype: protein_coding
description:
  biotin--[acetyl-CoA-carboxylase] synthetase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon.


ensembl_gene_id: HA48_21325
symbol: hdfR
gene_biotype: protein_coding
description:
  tRNA-Trp; Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon.


ensembl_gene_id: HA48_21335
symbol: HA48_21335
gene_biotype: protein_coding
description:
  Among the AAA+ ATPases, the YifB protease family belongs to the Helix 2 insert clade; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_21345
symbol: HA48_21345
gene_biotype: protein_coding
description:
  Acetolactate synthase 2 catalytic subunit; Catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_21355
symbol: HA48_21355
gene_biotype: protein_coding
description:
  Biotin transporter BioY; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_21370
symbol: HA48_21370
gene_biotype: protein_coding
description:
  Cellulose biosynthesis protein BcsC; Cellulose is produced by the multicellular morphotypes of E. coli and Salmonella typhimurium; the cellulose biosynthesis genes bcsA, bcsB, bcsZ and bcsC are constitutively transcribed, however, cellulose synthesis is dependent on the expression of adrA; incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_21375
symbol: HA48_21375
gene_biotype: protein_coding
description:
  Cellulose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_21390
symbol: HA48_21390
gene_biotype: protein_coding
description:
  ABC transporter permease; Frameshifted; incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_21400
symbol: HA48_21400
gene_biotype: protein_coding
description:
  N-formylglutamate deformylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_21430
symbol: HA48_21430
gene_biotype: protein_coding
description:
  Group II intron reverse transcriptase/maturase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_21440
symbol: HA48_21440
gene_biotype: protein_coding
description:
  Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the glycosyl hydrolase 2 family.


ensembl_gene_id: HA48_21445
symbol: HA48_21445
gene_biotype: protein_coding
description:
  Peptidase S8; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_21465
symbol: HA48_21465
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_21485
symbol: HA48_21485
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_21495
symbol: HA48_21495
gene_biotype: protein_coding
description:
  Cytochrome ubiquinol oxidase subunit I; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: HA48_21510
symbol: nusG
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Participates in transcription elongation, termination and antitermination. In the absence of Rho, increases the rate of transcription elongation by the RNA polymerase (RNAP), probably by partially suppressing pausing. In the presence of Rho, modulates most Rho-dependent termination events by interacting with the RNAP to render the complex more susceptible to the termination activity of Rho. May be required to overcome a kinetic limitation of Rho to function at certain terminators. Also involved in ribosomal RNA transcriptional antitermination; Belongs to the  [...]


ensembl_gene_id: HA48_21515
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family.


ensembl_gene_id: HA48_21520
symbol: ubiF
gene_biotype: protein_coding
description:
  2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol; functions in the biosynthesis of ubiquinone or coenzyme Q; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: HA48_21540
symbol: HA48_21540
gene_biotype: protein_coding
description:
  AraC family transcriptional regulator; Incomplete; too short partial abutting assembly gap; missing stop; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: HA48_21590
symbol: HA48_21590
gene_biotype: protein_coding
description:
  tRNA-Arg; Incomplete; too short partial abutting assembly gap; missing start; Derived by automated computational analysis using gene prediction method: Protein Homology.


