# geneInfo

ensembl_gene_id: Tph_c00010
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: Tph_c00020
symbol: dnaN
gene_biotype: protein_coding
description:
  DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of  [...]


ensembl_gene_id: Tph_c00030
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: Tph_c00050
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit beta; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: Tph_c00130
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit alpha; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: Tph_c00140
symbol: pdxS
gene_biotype: protein_coding
description:
  Pyridoxal biosynthesis lyase PdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.


ensembl_gene_id: Tph_c00150
symbol: pdxT
gene_biotype: protein_coding
description:
  Glutamine amidotransferase PdxT; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.


ensembl_gene_id: Tph_c00170
symbol: serA
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase SerA; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: Tph_c00180
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase SerS; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: Tph_c00260
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: Tph_c00290
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: Tph_c00300
symbol: rsmG
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: Tph_c00360
symbol: larC
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family.


ensembl_gene_id: Tph_c00430
symbol: selA
gene_biotype: protein_coding
description:
  L-seryl-tRNA(Sec) selenium transferase SelA; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.


ensembl_gene_id: Tph_c00460
symbol: braD1
gene_biotype: protein_coding
description:
  High-affinity branched-chain amino acid transport system permease protein BraD; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Tph_c00470
symbol: AFV10297.1
gene_biotype: protein_coding
description:
  ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Tph_c00590
symbol: kptA
gene_biotype: protein_coding
description:
  RNA 2'-phosphotransferase KptA; Removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''- cyclic phosphate (APPR>P). May function as an ADP-ribosylase.


ensembl_gene_id: Tph_c00720
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: Tph_c00800
symbol: dnaC
gene_biotype: protein_coding
description:
  Replicative DNA helicase DnaC; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: Tph_c00890
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase PurA; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: Tph_c01070
symbol: AFV10355.1
gene_biotype: protein_coding
description:
  ABC transporter, permease protein, FecCD family; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: Tph_c01190
symbol: AFV10367.1
gene_biotype: protein_coding
description:
  ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: Tph_c01240
symbol: phsA1
gene_biotype: protein_coding
description:
  Thiosulfate reductase PhsA; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: Tph_c01430
symbol: athL
gene_biotype: protein_coding
description:
  Pyrogallol hydroxytransferase large subunit AthL; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: Tph_c01480
symbol: mobA1
gene_biotype: protein_coding
description:
  Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.


ensembl_gene_id: Tph_c01500
symbol: AFV10398.1
gene_biotype: protein_coding
description:
  Molybdopterin biosynthesis protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: Tph_c01510
symbol: moeA1
gene_biotype: protein_coding
description:
  Molybdopterin molybdenumtransferase MoeA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: Tph_c01580
symbol: moaA1
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: Tph_c01630
symbol: moaC1
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: Tph_c01650
symbol: mog
gene_biotype: protein_coding
description:
  Molybdopterin biosynthesis enzyme Mog; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.


ensembl_gene_id: Tph_c01710
symbol: yoaE
gene_biotype: protein_coding
description:
  Molybdopterin containing oxidoreductase YoaE; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: Tph_c01740
symbol: fdhD2
gene_biotype: protein_coding
description:
  Formate dehydrogenase accessory protein FdhD; Required for formate dehydrogenase (FDH) activity. Belongs to the FdhD family.


ensembl_gene_id: Tph_c01940
symbol: vapC
gene_biotype: protein_coding
description:
  PilT-like protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.


ensembl_gene_id: Tph_c02240
symbol: macA
gene_biotype: protein_coding
description:
  Acrolide-specific efflux protein MacA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Tph_c03120
symbol: fla
gene_biotype: protein_coding
description:
  Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: Tph_c03420
symbol: fecCD
gene_biotype: protein_coding
description:
  ABC transporter, permease protein FecCD; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: Tph_c03710
symbol: aTP
gene_biotype: protein_coding
description:
  Guanido phosphotransferase ATP; Catalyzes the specific phosphorylation of arginine residues in proteins.


ensembl_gene_id: Tph_c03810
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: Tph_c03820
symbol: disA
gene_biotype: protein_coding
description:
  DNA integrity scanning protein DisA; Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation; upon encountering a lesion, the DisA focus arrests at the damaged site and halts c-di-AMP synthesis.


ensembl_gene_id: Tph_c03860
symbol: ispDF
gene_biotype: protein_coding
description:
  Bifunctional enzyme IspD/IspF; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF).


ensembl_gene_id: Tph_c04000
symbol: groL
gene_biotype: protein_coding
description:
  60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: Tph_c04010
symbol: groS
gene_biotype: protein_coding
description:
  10 kDa chaperonin; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: Tph_c04140
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease Rph; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: Tph_c04150
symbol: AFV10662.1
gene_biotype: protein_coding
description:
  Non-canonical purine NTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: Tph_c04630
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor Tig; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: Tph_c04640
symbol: clpP1
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: Tph_c04650
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: Tph_c04670
symbol: lonA
gene_biotype: protein_coding
description:
  ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: Tph_c04800
symbol: iorA1
gene_biotype: protein_coding
description:
  Indolepyruvate oxidoreductase subunit IorA; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.


ensembl_gene_id: Tph_c04860
symbol: pstB1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, ATP-binding protein PstB; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: Tph_c04870
symbol: phoU
gene_biotype: protein_coding
description:
  Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake.


ensembl_gene_id: Tph_c04880
symbol: pstC
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: Tph_c04910
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase ValS; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: Tph_c04940
symbol: thyX
gene_biotype: protein_coding
description:
  Thymidylate synthase ThyX; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: Tph_c04950
symbol: yacO
gene_biotype: protein_coding
description:
  tRNA/rRNA methyltransferase YacO; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: Tph_c05140
symbol: cobD1
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: Tph_c05180
symbol: cbiM1
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.


ensembl_gene_id: Tph_c05190
symbol: cbiN
gene_biotype: protein_coding
description:
  Cobalt transport protein CbiN; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.


ensembl_gene_id: Tph_c05210
symbol: cbiO1
gene_biotype: protein_coding
description:
  Cobalt ABC transporter, ATP-binding protein CbiO; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.


ensembl_gene_id: Tph_c05220
symbol: cbiD
gene_biotype: protein_coding
description:
  cobalt-precorrin-6A synthase CbiD; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.


ensembl_gene_id: Tph_c05300
symbol: cobQ
gene_biotype: protein_coding
description:
  Cobyric acid synthase CobQ; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: Tph_c05310
symbol: mviN1
gene_biotype: protein_coding
description:
  Virulence factor MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: Tph_c05320
symbol: fbp
gene_biotype: protein_coding
description:
  D-fructose 1,6-bisphosphatase class V; Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3- phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P).


ensembl_gene_id: Tph_c05590
symbol: yxlA
gene_biotype: protein_coding
description:
  Permease for cytosine/purines, uracil, thiamine, allantoin; Belongs to the purine-cytosine permease (2.A.39) family.


ensembl_gene_id: Tph_c05600
symbol: cobT1
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase CobT; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: Tph_c05700
symbol: fliW
gene_biotype: protein_coding
description:
  Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.


ensembl_gene_id: Tph_c05710
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: Tph_c05790
symbol: AFV10817.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: Tph_c05830
symbol: dgt
gene_biotype: protein_coding
description:
  Deoxyguanosinetriphosphate triphosphohydrolase Dgt; Belongs to the dGTPase family. Type 2 subfamily.


ensembl_gene_id: Tph_c05840
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: Tph_c05850
symbol: rpoD1
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: Tph_c05930
symbol: rex
gene_biotype: protein_coding
description:
  Redox-sensing transcriptional repressor Rex; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: Tph_c05950
symbol: maf
gene_biotype: protein_coding
description:
  Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: Tph_c06010
symbol: minC
gene_biotype: protein_coding
description:
  Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: Tph_c06030
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: Tph_c06040
symbol: spoVE1
gene_biotype: protein_coding
description:
  Stage V sporulation protein E; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: Tph_c06090
symbol: ade
gene_biotype: protein_coding
description:
  Adenine deaminase Ade; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.


ensembl_gene_id: Tph_c06220
symbol: vapC-5
gene_biotype: protein_coding
description:
  Putative PIN domain containing protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.


ensembl_gene_id: Tph_c06360
symbol: AFV10870.1
gene_biotype: protein_coding
description:
  Periplasmic [NiFeSe] hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.


ensembl_gene_id: Tph_c06410
symbol: AFV10875.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: Tph_c06460
symbol: yfiA
gene_biotype: protein_coding
description:
  Ribosomal subunit interface protein YfiA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: Tph_c06470
symbol: secA
gene_biotype: protein_coding
description:
  Protein translocase SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: Tph_c06490
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: Tph_c06530
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: Tph_c06540
symbol: ftsX
gene_biotype: protein_coding
description:
  Cell division protein FtsX; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: Tph_c06630
symbol: uvrB
gene_biotype: protein_coding
description:
  UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...]


ensembl_gene_id: Tph_c06640
symbol: uvrA
gene_biotype: protein_coding
description:
  UvrABC system protein A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: Tph_c06650
symbol: uvrC
gene_biotype: protein_coding
description:
  UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: Tph_c06700
symbol: AFV10904.1
gene_biotype: protein_coding
description:
  CofD-like protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.


ensembl_gene_id: Tph_c06740
symbol: gap
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase Gap; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: Tph_c06760
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase TpiA; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: Tph_c06770
symbol: gpmI
gene_biotype: protein_coding
description:
  2,3-bisphosphoglycerate-independent phosphoglycerate mutase GpmI; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: Tph_c06780
symbol: eno
gene_biotype: protein_coding
description:
  Enolase Eno; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: Tph_c06790
symbol: secG
gene_biotype: protein_coding
description:
  Preprotein translocase SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: Tph_c07140
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: Tph_c07150
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein SmpB; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switch [...]


ensembl_gene_id: Tph_c08020
symbol: hppA1
gene_biotype: protein_coding
description:
  Pyrophosphate-energized proton pump HppA; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily.


ensembl_gene_id: Tph_c08030
symbol: plsY1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate acyltransferase PlsY; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: Tph_c08150
symbol: wecC
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-mannosamine dehydrogenase WecC; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: Tph_c08310
symbol: moeA3
gene_biotype: protein_coding
description:
  Molybdopterin biosynthesis protein MoeA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: Tph_c08390
symbol: ahcY
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase AhcY; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: Tph_c08400
symbol: hpt
gene_biotype: protein_coding
description:
  Hypoxanthine-guanine phosphoribosyltransferase Hpt; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: Tph_c08420
symbol: purE
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase catalytic subunit PurE; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: Tph_c08440
symbol: purS
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase subunit PurS; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought  [...]


ensembl_gene_id: Tph_c08450
symbol: purQ
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase 1; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]


ensembl_gene_id: Tph_c08460
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase 2; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]


ensembl_gene_id: Tph_c08470
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase PurF; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: Tph_c08490
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase PurN; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: Tph_c08600
symbol: cobB
gene_biotype: protein_coding
description:
  Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: Tph_c08610
symbol: nadE1
gene_biotype: protein_coding
description:
  Glutamine-dependent NAD+ synthetase NadE; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: Tph_c08650
symbol: nifH
gene_biotype: protein_coding
description:
  Nitrogenase iron protein NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.


ensembl_gene_id: Tph_c08810
symbol: hisZ
gene_biotype: protein_coding
description:
  histidyl-tRNA ligase HisZ; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: Tph_c08820
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase catalytic subunit HisG; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: Tph_c08830
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase HisD; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: Tph_c08850
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase glutamine amidotransferase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: Tph_c08860
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase HisA.


ensembl_gene_id: Tph_c08870
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: Tph_c08880
symbol: hisI
gene_biotype: protein_coding
description:
  Histidine biosynthesis bifunctional protein HisIE; In the N-terminal section; belongs to the PRA-CH family.


ensembl_gene_id: Tph_c08910
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: Tph_c08960
symbol: gatC
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: Tph_c08970
symbol: gatA
gene_biotype: protein_coding
description:
  glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: Tph_c08980
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: Tph_c09010
symbol: leuC1
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase large subunit 1; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: Tph_c09020
symbol: leuD1
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase small subunit 2; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.


ensembl_gene_id: Tph_c09300
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase UppP; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: Tph_c09380
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase PfkA; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: Tph_c09610
symbol: pflA1
gene_biotype: protein_coding
description:
  Pyruvate formate-lyase-activating enzyme PflA; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.


ensembl_gene_id: Tph_c09790
symbol: cbiO2
gene_biotype: protein_coding
description:
  Cobalt ABC transport system ATP-binding protein CbiO; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.


ensembl_gene_id: Tph_c09810
symbol: speE1
gene_biotype: protein_coding
description:
  Spermidine synthase SpeE; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: Tph_c09950
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase ThrS; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: Tph_c09980
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: Tph_c10010
symbol: gpr
gene_biotype: protein_coding
description:
  Germination protease Gpr; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.


ensembl_gene_id: Tph_c10050
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase CoaD; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: Tph_c10090
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase AckA; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: Tph_c10120
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate acyltransferase PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: Tph_c10140
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: Tph_c10160
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome partition protein Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: Tph_c10170
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: Tph_c10180
symbol: mtaP
gene_biotype: protein_coding
description:
  Methylthioadenosine phosphorylase MtaP; Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage.


ensembl_gene_id: Tph_c10190
symbol: mtnA
gene_biotype: protein_coding
description:
  Methylthioribose-1-phosphate isomerase MtnA; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: Tph_c10210
symbol: mtaD
gene_biotype: protein_coding
description:
  5-methylthioadenosine/S-adenosylhomocysteine deaminase MtaD; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family.


ensembl_gene_id: Tph_c10220
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle GTPase Ffh; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: Tph_c10250
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA-processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: Tph_c10260
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-N(1)-)-methyltransferase TrmD; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: Tph_c10270
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: Tph_c10290
symbol: rbgA
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: Tph_c10520
symbol: gvpA1
gene_biotype: protein_coding
description:
  Gas vesicle structural protein GvpA; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure.


ensembl_gene_id: Tph_c10610
symbol: gvpA3
gene_biotype: protein_coding
description:
  Gas vesicle structural protein GvpA; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth.


ensembl_gene_id: Tph_c10700
symbol: ku
gene_biotype: protein_coding
description:
  ATP-dependet DANN helicase Ku type; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.


ensembl_gene_id: Tph_c10720
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: Tph_c10730
symbol: trmFO
gene_biotype: protein_coding
description:
  methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: Tph_c10740
symbol: xerC
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: Tph_c10750
symbol: hslV
gene_biotype: protein_coding
description:
  ATP-dependent protease subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: Tph_c10760
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent protease ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: Tph_c10770
symbol: codY
gene_biotype: protein_coding
description:
  GTP-sensing transcriptional pleiotropic repressor CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family.


ensembl_gene_id: Tph_c10790
symbol: flgB
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: Tph_c10820
symbol: fliF
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: Tph_c10930
symbol: fliL
gene_biotype: protein_coding
description:
  Flagellar basal body protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: Tph_c10980
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: Tph_c10990
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: Tph_c11000
symbol: fliR
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FiR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: Tph_c11010
symbol: flhB2
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: Tph_c11020
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: Tph_c11060
symbol: cheB2
gene_biotype: protein_coding
description:
  Chemotaxis response regulator protein-glutamate methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: Tph_c11090
symbol: cheD
gene_biotype: protein_coding
description:
  Chemoreceptor glutamine deamidase CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: Tph_c11150
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: Tph_c11170
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome-recycling factor Frr; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: Tph_c11200
symbol: uppS
gene_biotype: protein_coding
description:
  Undecaprenyl pyrophosphate synthase UppS; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: Tph_c11230
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase Dxr; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: Tph_c11250
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase IspG; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: Tph_c11260
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase ProS; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involve [...]


ensembl_gene_id: Tph_c11270
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: Tph_c11280
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription elongation protein NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: Tph_c11310
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: Tph_c11320
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: Tph_c11340
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: Tph_c11360
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: Tph_c11370
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase Pnp; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: Tph_c11420
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase DapB; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: Tph_c11450
symbol: asdB
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase AsdB; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: Tph_c11460
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase DapA; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: Tph_c11470
symbol: rnjA
gene_biotype: protein_coding
description:
  Ribonuclease J 1; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: Tph_c11530
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: Tph_c11570
symbol: ligT
gene_biotype: protein_coding
description:
  2'-5' RNA ligase LigT; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: Tph_c11580
symbol: recA
gene_biotype: protein_coding
description:
  Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: Tph_c11590
symbol: cvfA
gene_biotype: protein_coding
description:
  2',3'-cyclic-nucleotide 2'-phosphodiesterase CvfA; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.


ensembl_gene_id: Tph_c11700
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin-5-phosphate synthase CobS; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: Tph_c11720
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5'-monophosphate dehydrogenase GuaB; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: Tph_c12290
symbol: ruvC
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: Tph_c12300
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: Tph_c12310
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: Tph_c12320
symbol: queH
gene_biotype: protein_coding
description:
  Hypothetical protein DUF208; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: Tph_c12360
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase QueA; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: Tph_c12370
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase Tgt; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to fo [...]


ensembl_gene_id: Tph_c12410
symbol: secD
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: Tph_c12420
symbol: secF
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: Tph_c12440
symbol: AFV11465.1
gene_biotype: protein_coding
description:
  Cation efflux protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: Tph_c12460
symbol: relA
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: Tph_c12470
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(tyr) deacylase Dtd; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: Tph_c12500
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase AspS; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: Tph_c12510
symbol: paaK1
gene_biotype: protein_coding
description:
  Phenylacetate-coenzyme A ligase PaaK; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).


ensembl_gene_id: Tph_c12560
symbol: mraW
gene_biotype: protein_coding
description:
  S-adenosyl-L-methionine-dependent methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: Tph_c12590
symbol: murE1
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase MurE; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: Tph_c12600
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase MurF; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: Tph_c12610
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase MraY; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: Tph_c12620
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase MurD; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: Tph_c12640
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: Tph_c12670
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: Tph_c12690
symbol: ftsA1
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: Tph_c12700
symbol: ftsZ1
gene_biotype: protein_coding
description:
  Cell division protein, tubulin FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: Tph_c12710
symbol: AFV11492.1
gene_biotype: protein_coding
description:
  spoIIGA: sporulation sigma-E factor-processing peptidase; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.


ensembl_gene_id: Tph_c12720
symbol: sigE
gene_biotype: protein_coding
description:
  Sporulation-specific RNA polymerase sigma-70 factor SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: Tph_c12730
symbol: sigG1
gene_biotype: protein_coding
description:
  Sporulation-specific RNA polymerase sigma-G factor SigG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: Tph_c12760
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: Tph_c12790
symbol: nrdG
gene_biotype: protein_coding
description:
  Anaerobic ribonucleoside-triphosphate reductase activating protein NrdG; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.


ensembl_gene_id: Tph_c12800
symbol: AFV11501.1
gene_biotype: protein_coding
description:
  Multi-copper polyphenol oxidoreductase, laccase; Belongs to the multicopper oxidase YfiH/RL5 family.


ensembl_gene_id: Tph_c12830
symbol: AFV11504.1
gene_biotype: protein_coding
description:
  Pyridoxal phosphate-dependent enzyme; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: Tph_c12840
symbol: sepF
gene_biotype: protein_coding
description:
  Cell division protein SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: Tph_c12850
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase ProC; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: Tph_c12900
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucyl-tRNA synthetase IleS; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: Tph_c12960
symbol: lspA
gene_biotype: protein_coding
description:
  Lipoprotein signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: Tph_c12970
symbol: rluA
gene_biotype: protein_coding
description:
  Pseudouridylate synthase RluA; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: Tph_c13030
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: Tph_c13150
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase Ddl; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: Tph_c13190
symbol: trmH
gene_biotype: protein_coding
description:
  tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmH; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: Tph_c13270
symbol: argD1
gene_biotype: protein_coding
description:
  Ornithine/acetylornithine aminotransferase ArgD; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: Tph_c13310
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: Tph_c13330
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: Tph_c13340
symbol: spoU
gene_biotype: protein_coding
description:
  tRNA/rRNA methyltransferase SpoU; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: Tph_c13350
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase subunit alpha; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: Tph_c13360
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: Tph_c13370
symbol: zapA
gene_biotype: protein_coding
description:
  Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: Tph_c13400
symbol: crcB
gene_biotype: protein_coding
description:
  Camphor resistance CrcB-like protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: Tph_c13410
symbol: ccrB
gene_biotype: protein_coding
description:
  Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: Tph_c13440
symbol: mutS1
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: Tph_c13670
symbol: lexA2
gene_biotype: protein_coding
description:
  LexA repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: Tph_c13690
symbol: accA
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: Tph_c13700
symbol: accD
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: Tph_c13710
symbol: fabZ
gene_biotype: protein_coding
description:
  (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: Tph_c13720
symbol: fabF
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: Tph_c13730
symbol: fabG
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase FabG; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Tph_c13760
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase 3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: Tph_c13840
symbol: hfq
gene_biotype: protein_coding
description:
  RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: Tph_c13850
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA delta(2)-isopentenylpyrophosphate transferase MiaA; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: Tph_c13860
symbol: mutL1
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: Tph_c13890
symbol: mutS2
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: Tph_c13910
symbol: miaB
gene_biotype: protein_coding
description:
  (dimethylallyl)adenosine tRNA methylthiotransferase MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: Tph_c14020
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase RibH; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: Tph_c14030
symbol: ribBA
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibBA; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: Tph_c14050
symbol: ribD
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: Tph_c14220
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: Tph_c14270
symbol: rsmB
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: Tph_c14280
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase Fmt; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: Tph_c14290
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase Def; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: Tph_c14300
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: Tph_c14310
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthase MetK; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: Tph_c14320
symbol: coaBC
gene_biotype: protein_coding
description:
  Coenzyme A biosynthesis bifunctional protein; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: Tph_c14330
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: Tph_c14370
symbol: dapL
gene_biotype: protein_coding
description:
  LL-diaminopimelate aminotransferase DapL; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate.


ensembl_gene_id: Tph_c14380
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase DapF; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: Tph_c14410
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase PyrE; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: Tph_c14420
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase PyrF; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: Tph_c14440
symbol: pyrK
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase electron transfer subunit PyrK; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).


ensembl_gene_id: Tph_c14470
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase PyrC; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: Tph_c14480
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase PyrB; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: Tph_c14490
symbol: pyrR
gene_biotype: protein_coding
description:
  Bifunctional protein PyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.


ensembl_gene_id: Tph_c14920
symbol: surE
gene_biotype: protein_coding
description:
  5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: Tph_c15020
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase HisC; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: Tph_c15100
symbol: metF
gene_biotype: protein_coding
description:
  5,10-methylenetetrahydrofolate reductase; NADPH; Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: Tph_c15330
symbol: hemC
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase HemC; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: Tph_c15340
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase HemA; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: Tph_c15370
symbol: AFV11743.1
gene_biotype: protein_coding
description:
  Putative formate dehydrogenase formation protein; Necessary for formate dehydrogenase activity. Belongs to the FdhE family.


ensembl_gene_id: Tph_c15400
symbol: fdhA1
gene_biotype: protein_coding
description:
  Formate dehydrogenase subunit alpha; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: Tph_c15420
symbol: tatC
gene_biotype: protein_coding
description:
  Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.


ensembl_gene_id: Tph_c15440
symbol: ubiX-2
gene_biotype: protein_coding
description:
  Putative aromatic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: Tph_c15490
symbol: speH
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase proenzyme SpeH; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.


ensembl_gene_id: Tph_c15540
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase ThrB; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: Tph_c15550
symbol: thrC1
gene_biotype: protein_coding
description:
  Threonine synthase ThrC; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.


ensembl_gene_id: Tph_c15570
symbol: spoIVA
gene_biotype: protein_coding
description:
  Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.


ensembl_gene_id: Tph_c15580
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; NAD(P)+; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: Tph_c15590
symbol: plsY2
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate acyltransferase 2; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: Tph_c15600
symbol: engA
gene_biotype: protein_coding
description:
  Ribosome GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: Tph_c15690
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: Tph_c15700
symbol: plsC
gene_biotype: protein_coding
description:
  1-acyl-sn-glycerol-3-phosphate acyltransferase PlsC; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: Tph_c15720
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase AroA; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: Tph_c15750
symbol: aroH
gene_biotype: protein_coding
description:
  Chorismate mutase AroH; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.


ensembl_gene_id: Tph_c15810
symbol: btuC
gene_biotype: protein_coding
description:
  Vitamin B12 ABC transport system permease protein BtuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: Tph_c15830
symbol: rluB
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: Tph_c15900
symbol: scpB
gene_biotype: protein_coding
description:
  Chromosome segregation and condensation protein ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: Tph_c15910
symbol: scpA
gene_biotype: protein_coding
description:
  Chromosome segregation and condensation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: Tph_c15940
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase LysA; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: Tph_c16020
symbol: sigG2
gene_biotype: protein_coding
description:
  Sporulation sigma-G factor SigG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: Tph_c16030
symbol: spoIIAB
gene_biotype: protein_coding
description:
  spoIIAB: anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.


ensembl_gene_id: Tph_c16070
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase DeoB; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: Tph_c16080
symbol: xerD
gene_biotype: protein_coding
description:
  Site-specific tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: Tph_c16200
symbol: spo0A
gene_biotype: protein_coding
description:
  Stage 0 sporulation transcription factor Spo0A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.


ensembl_gene_id: Tph_c16240
symbol: ppnK1
gene_biotype: protein_coding
description:
  Inorganic polyphosphate/ATP-NAD kinase PpnK; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: Tph_c16260
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase Dxs; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: Tph_c16290
symbol: xseA1
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit XseA; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: Tph_c16300
symbol: xseA2
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit XseA; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: Tph_c16310
symbol: folD1
gene_biotype: protein_coding
description:
  Methylenetetrahydrofolate dehydrogenase (NADP(+))/cyclohydrolase FolD; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: Tph_c16330
symbol: nusB
gene_biotype: protein_coding
description:
  Transcription antitermination protein NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: Tph_c16370
symbol: accC
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase biotin carboxylase subunit AccC; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: Tph_c16480
symbol: efp
gene_biotype: protein_coding
description:
  Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: Tph_c16500
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase AroQ; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: Tph_c16670
symbol: aroB1
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase AroB; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: Tph_c16680
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase AroK; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: Tph_c16690
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase AroC; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: Tph_c16700
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase AroE; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: Tph_c16880
symbol: mltG
gene_biotype: protein_coding
description:
  Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: Tph_c16910
symbol: AFV11894.1
gene_biotype: protein_coding
description:
  Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: Tph_c16940
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase AlaS; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: Tph_c17070
symbol: dppF
gene_biotype: protein_coding
description:
  D,D-dipeptide ABC transport system ATP-binding protein DppF; Belongs to the ABC transporter superfamily.


ensembl_gene_id: Tph_c17080
symbol: dppD
gene_biotype: protein_coding
description:
  D,D-dipeptide ABC transport system ATP-binding protein DppD; Belongs to the ABC transporter superfamily.


ensembl_gene_id: Tph_c17140
symbol: sdaAA
gene_biotype: protein_coding
description:
  Putative L-serine dehydratase alpha subunit; Belongs to the iron-sulfur dependent L-serine dehydratase family.


ensembl_gene_id: Tph_c17150
symbol: sdaAB
gene_biotype: protein_coding
description:
  L-serine dehydratase beta subunit; Belongs to the iron-sulfur dependent L-serine dehydratase family.


ensembl_gene_id: Tph_c17190
symbol: gcvPB
gene_biotype: protein_coding
description:
  Putative glycine dehydrogenase decarboxylating-subunit 2; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily.


ensembl_gene_id: Tph_c17200
symbol: gcvPA
gene_biotype: protein_coding
description:
  Putative glycine dehydrogenase decarboxylating-subunit 1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: Tph_c17210
symbol: gcvH1
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein GcvH; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: Tph_c17220
symbol: gcvT
gene_biotype: protein_coding
description:
  Glycine cleavage system aminomethyltransferase T; The glycine cleavage system catalyzes the degradation of glycine.


ensembl_gene_id: Tph_c17290
symbol: trmU
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate) -methyltransferase TrmU; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: Tph_c17360
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: Tph_c17650
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase GltX; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).


ensembl_gene_id: Tph_c17700
symbol: AFV11971.1
gene_biotype: protein_coding
description:
  FAD-dependent pyridine nucleotide-disulfide oxidoreductase; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: Tph_c17780
symbol: thiE1
gene_biotype: protein_coding
description:
  Thiamine-phosphate pyrophosphorylase ThiE; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: Tph_c17790
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase ThiM; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: Tph_c17830
symbol: thiC1
gene_biotype: protein_coding
description:
  Phosphomethylpyrimidine synthase ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.


ensembl_gene_id: Tph_c17870
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole synthase ThiG; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: Tph_c17950
symbol: gsiA
gene_biotype: protein_coding
description:
  Glutathione ABC transport system ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.


ensembl_gene_id: Tph_c18060
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase CoaE; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: Tph_c18080
symbol: mutM
gene_biotype: protein_coding
description:
  formamidopyrimidine-DNA glycosylase MutM; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: Tph_c18090
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.


ensembl_gene_id: Tph_c18130
symbol: nadE2
gene_biotype: protein_coding
description:
  NH(3)-dependent NAD(+) synthetase NadE; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.


ensembl_gene_id: Tph_c18180
symbol: tatA
gene_biotype: protein_coding
description:
  Twin-arginine translocation protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: Tph_c18270
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase TyrS; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.


ensembl_gene_id: Tph_c18300
symbol: AFV12027.1
gene_biotype: protein_coding
description:
  Putative CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: Tph_c18320
symbol: AFV12029.1
gene_biotype: protein_coding
description:
  Cobalt import ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Tph_c18380
symbol: queF
gene_biotype: protein_coding
description:
  NADPH-dependent 7-cyano-7-deazaguanine reductase QueF; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.


ensembl_gene_id: Tph_c18490
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase Lgt; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: Tph_c18500
symbol: gcp
gene_biotype: protein_coding
description:
  Putative O-sialoglycoprotein endopeptidase Gcp; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: Tph_c18560
symbol: alr1
gene_biotype: protein_coding
description:
  Alanine racemase Alr; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: Tph_c18570
symbol: nnrE
gene_biotype: protein_coding
description:
  Carbohydrate kinase-like protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair [...]


ensembl_gene_id: Tph_c18580
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-[acyl-carrier-protein] synthase AcpS; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: Tph_c18610
symbol: engD
gene_biotype: protein_coding
description:
  GTP-dependent nucleic acid-binding protein EngD; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: Tph_c18730
symbol: pdg
gene_biotype: protein_coding
description:
  Ultraviolet N-glycosylase/AP lyase Pdg; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: Tph_c18960
symbol: cas4
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.


ensembl_gene_id: Tph_c18970
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated endoribonuclease Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: Tph_c18980
symbol: cas1
gene_biotype: protein_coding
description:
  CRISPR-associated metal-dependent DNA-specific endonuclease cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: Tph_c19220
symbol: AFV12118.1
gene_biotype: protein_coding
description:
  Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: Tph_c19610
symbol: AFV12155.1
gene_biotype: protein_coding
description:
  AhpD domain-containing protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: Tph_c19630
symbol: acox
gene_biotype: protein_coding
description:
  Acetoin catabolism protein X; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: Tph_c19720
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: Tph_c19730
symbol: glmM2
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase GlmM; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: Tph_c19750
symbol: dacA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: Tph_c19810
symbol: leuB2
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase LeuB; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: Tph_c19820
symbol: leuD2
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase small subunit LeuD; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.


ensembl_gene_id: Tph_c19830
symbol: leuC2
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase large subunit LeuC; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: Tph_c19840
symbol: leuA2
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase LeuA; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: Tph_c19850
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase IlvC; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: Tph_c19890
symbol: ilvE1
gene_biotype: protein_coding
description:
  Branched-chain-amino-acid aminotransferase IlvE; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: Tph_c20260
symbol: glmE
gene_biotype: protein_coding
description:
  Methylaspartate mutase subunit E; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).


ensembl_gene_id: Tph_c20280
symbol: mamA
gene_biotype: protein_coding
description:
  Methylaspartate mutase subunit S; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).


ensembl_gene_id: Tph_c20790
symbol: AFV12273.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyl transferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: Tph_c21090
symbol: rsmE
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: Tph_c21100
symbol: dnaJ
gene_biotype: protein_coding
description:
  Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]


ensembl_gene_id: Tph_c21120
symbol: grpE
gene_biotype: protein_coding
description:
  Protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...]


ensembl_gene_id: Tph_c21130
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: Tph_c21140
symbol: hemN
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen-III oxidase 1; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: Tph_c21150
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: Tph_c21300
symbol: tatA-2
gene_biotype: protein_coding
description:
  Putative bacterial sec-independent translocation protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: Tph_c21520
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosome protein, Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: Tph_c21540
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase NadD; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: Tph_c21550
symbol: proA
gene_biotype: protein_coding
description:
  Gamma-glutamyl phosphate reductase ProA; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: Tph_c21560
symbol: prob
gene_biotype: protein_coding
description:
  Glutamate 5-kinase ProB; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: Tph_c21570
symbol: obg
gene_biotype: protein_coding
description:
  GTPase Obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: Tph_c21600
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: Tph_c22330
symbol: AFV12423.1
gene_biotype: protein_coding
description:
  Putative aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: Tph_c22340
symbol: nfo
gene_biotype: protein_coding
description:
  Apurinic endonuclease Nfo; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.


ensembl_gene_id: Tph_c22420
symbol: adcA
gene_biotype: protein_coding
description:
  Zinc transport system zinc-binding lipoprotein AdcA; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: Tph_c22550
symbol: AFV12445.1
gene_biotype: protein_coding
description:
  Nucleotide-binding protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: Tph_c22640
symbol: metN
gene_biotype: protein_coding
description:
  Methionine import ATP-binding protein MetN; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: Tph_c22680
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase DeoC; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: Tph_c22690
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: Tph_c22700
symbol: cdd
gene_biotype: protein_coding
description:
  Cytidine deaminase Cdd; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: Tph_c22720
symbol: ybeY
gene_biotype: protein_coding
description:
  Putative metallohydrolase, YbeY/ UPF0054 family; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: Tph_c23410
symbol: AFV12531.1
gene_biotype: protein_coding
description:
  ParA/MinD-like ATPase; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: Tph_c23500
symbol: rumA
gene_biotype: protein_coding
description:
  23S rRNA (uracil-5-)-methyltransferase RumA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: Tph_c23650
symbol: AFV12555.1
gene_biotype: protein_coding
description:
  Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Tph_c23750
symbol: AFV12562.1
gene_biotype: protein_coding
description:
  Branched chain amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Tph_c23830
symbol: fni
gene_biotype: protein_coding
description:
  Isopentenyl-diphosphate delta-isomerase Fni; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).


ensembl_gene_id: Tph_c23880
symbol: ubiX
gene_biotype: protein_coding
description:
  3-polyprenyl-4-hydroxybenzoate decarboxylase UbiX; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: Tph_c24370
symbol: cas6-2
gene_biotype: protein_coding
description:
  CRISPR-associated endoribonuclease Cas6; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA).


ensembl_gene_id: Tph_c25430
symbol: argG
gene_biotype: protein_coding
description:
  Argininosuccinate synthase ArgG; Belongs to the argininosuccinate synthase family. Type 1 subfamily.


ensembl_gene_id: Tph_c25440
symbol: argF
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase ArgF; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: Tph_c25450
symbol: argD2
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase ArgD; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: Tph_c25460
symbol: argB2
gene_biotype: protein_coding
description:
  Acetylglutamate kinase ArgB; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: Tph_c25470
symbol: argJ
gene_biotype: protein_coding
description:
  Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: Tph_c25480
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase ArgC; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: Tph_c25540
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: Tph_c25550
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: Tph_c25570
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: Tph_c25580
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: Tph_c25590
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: Tph_c25600
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: Tph_c25620
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: Tph_c25640
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase Map; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: Tph_c25650
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase Adk; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: Tph_c25660
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: Tph_c25670
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: Tph_c25680
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: Tph_c25690
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: Tph_c25700
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: Tph_c25710
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: Tph_c25720
symbol: rpsZ
gene_biotype: protein_coding
description:
  30S ribosomal protein S14 type Z; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: Tph_c25730
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: Tph_c25740
symbol: rplX
gene_biotype: protein_coding
description:
  50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: Tph_c25750
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: Tph_c25760
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: Tph_c25780
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: Tph_c25790
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: Tph_c25800
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: Tph_c25810
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: Tph_c25820
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: Tph_c25830
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: Tph_c25850
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: Tph_c25860
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: Tph_c25870
symbol: tuf2
gene_biotype: protein_coding
description:
  Elongation factor Tu 2; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: Tph_c25880
symbol: fusA2
gene_biotype: protein_coding
description:
  Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: Tph_c25890
symbol: rpsG
gene_biotype: protein_coding
description:
  30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: Tph_c25900
symbol: rpsL
gene_biotype: protein_coding
description:
  30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: Tph_c25920
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: Tph_c26050
symbol: rplL
gene_biotype: protein_coding
description:
  L12: ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: Tph_c26060
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: Tph_c26070
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: Tph_c26080
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: Tph_c26090
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: Tph_c26100
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: Tph_c26200
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: Tph_c26410
symbol: modB
gene_biotype: protein_coding
description:
  Molybdate/tungstate ABC transport system permease protein ModB; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: Tph_c26490
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase alpha subunit TrpA; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: Tph_c26500
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase beta subunit TrpB; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: Tph_c26530
symbol: trpGD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: Tph_c26540
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase component 1; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]


ensembl_gene_id: Tph_c26580
symbol: nifR
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase 1; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: Tph_c26590
symbol: coaX
gene_biotype: protein_coding
description:
  Type III pantothenate kinase CoaX; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: Tph_c26600
symbol: birA
gene_biotype: protein_coding
description:
  biotin--acetyl-CoA-carboxylase ligase BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: Tph_c26630
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthase subunit A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: Tph_c26650
symbol: sodF
gene_biotype: protein_coding
description:
  Putative superoxide dismutase Mn/Fe; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: Tph_c26670
symbol: hppA2
gene_biotype: protein_coding
description:
  Pyrophosphate-energized proton pump HppA; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force.


ensembl_gene_id: Tph_c26700
symbol: panD
gene_biotype: protein_coding
description:
  Aspartate 1-decarboxylase PanD; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: Tph_c26710
symbol: panC
gene_biotype: protein_coding
description:
  Pantothenate synthetase PanC; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: Tph_c26720
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase PanB; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: Tph_c26750
symbol: folB
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase FolB; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: Tph_c26800
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase Ndk; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: Tph_c26810
symbol: ftsH2
gene_biotype: protein_coding
description:
  Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: Tph_c26820
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase TilS; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: Tph_c26890
symbol: hypA
gene_biotype: protein_coding
description:
  Hydrogenase nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.


ensembl_gene_id: Tph_c27020
symbol: glyA1
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase GlyA; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: Tph_c27360
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F1complex subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: Tph_c27370
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase F1 complex subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits; Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: Tph_c27380
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase F1 complex subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: Tph_c27390
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase F1 complex subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: Tph_c27400
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase F1 complex subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation; Belongs to the ATPase delta chain family.


ensembl_gene_id: Tph_c27410
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase F0 complex subunit beta; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: Tph_c27420
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase F0 complex subunit gamma; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: Tph_c27430
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0 complex subunit alpha; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane.


ensembl_gene_id: Tph_c27460
symbol: wecB
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase WecB; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: Tph_c27530
symbol: AFV12918.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: Tph_c27550
symbol: hemK
gene_biotype: protein_coding
description:
  Methyltransferase HemK; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: Tph_c27560
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: Tph_c27650
symbol: caiT
gene_biotype: protein_coding
description:
  L-carnitine/gamma-butyrobetaine antiporter CaiT; Belongs to the BCCT transporter (TC 2.A.15) family.


ensembl_gene_id: Tph_c27810
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: Tph_c27820
symbol: fsa
gene_biotype: protein_coding
description:
  Fructose-6-phosphate aldolase Fsa; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: Tph_c27870
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase PyrG; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: Tph_c28040
symbol: rlmH
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: Tph_c28070
symbol: murA2
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase 2; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: Tph_c28170
symbol: tarA
gene_biotype: protein_coding
description:
  N-acetylmannosaminyltransferase TarA; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.


ensembl_gene_id: Tph_c28220
symbol: hup
gene_biotype: protein_coding
description:
  DNA-binding protein Hup; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: Tph_c28270
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair-coupling factor Mfd; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: Tph_c28300
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase Pth; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: Tph_c28310
symbol: rplY
gene_biotype: protein_coding
description:
  50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: Tph_c28330
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: Tph_c28340
symbol: glmU
gene_biotype: protein_coding
description:
  Bifunctional protein GlmU; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: Tph_c28380
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase IspE; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: Tph_c28470
symbol: AFV13012.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection; Belongs to the YbaB/EbfC family.


ensembl_gene_id: Tph_c28690
symbol: rsmA
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: Tph_c28730
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase MetG; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: Tph_c28760
symbol: rsmI
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: Tph_c28790
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase Tmk; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: Tph_c28990
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: Tph_c29000
symbol: AFV13065.1
gene_biotype: protein_coding
description:
  YbaB/EbfC-like DNA-binding protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: Tph_c29010
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: Tph_c29040
symbol: nadE3
gene_biotype: protein_coding
description:
  NH(3)-dependent NAD(+) synthetase NadE; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source.


ensembl_gene_id: Tph_c29070
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA-specific adenosine deaminase TadA; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


# pathwayInfo

id: CL:1006
description: Mixed, incl. Cell division, and Regulation of cell shape
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1006_Mixed,_incl._Cell_division,_and_Regulation_of_cell_shape


id: CL:1007
description: Mixed, incl. Cell division, and Regulation of cell shape
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1007_Mixed,_incl._Cell_division,_and_Regulation_of_cell_shape


id: CL:1008
description: Mixed, incl. Cell division, and Regulation of cell shape
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1008_Mixed,_incl._Cell_division,_and_Regulation_of_cell_shape


id: CL:1010
description: Cell division, and Vancomycin resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1010_Cell_division,_and_Vancomycin_resistance


id: CL:1012
description: Cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1012_Cell_shape,_and_Cell_division_site


id: CL:1014
description: Cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1014_Cell_shape,_and_Cell_division_site


id: CL:1054
description: Mixed, incl. Regulation of cell shape, and Regulation of cell cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1054_Mixed,_incl._Regulation_of_cell_shape,_and_Regulation_of_cell_cycle


id: CL:1055
description: Mixed, incl. Cell morphogenesis, and Penicillin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1055_Mixed,_incl._Cell_morphogenesis,_and_Penicillin_binding


id: CL:1057
description: Mixed, incl. Actin, and Inosine triphosphate pyrophosphatase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1057_Mixed,_incl._Actin,_and_Inosine_triphosphate_pyrophosphatase-like


id: CL:108
description: Ribosomal subunit, and K Homology domain, type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:108_Ribosomal_subunit,_and_K_Homology_domain,_type_2


id: CL:1082
description: K Homology domain, type 1 superfamily, and Peptidase M23
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1082_K_Homology_domain,_type_1_superfamily,_and_Peptidase_M23


id: CL:1098
description: Mixed, incl. Arginine and proline metabolism, and ATP-cone domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1098_Mixed,_incl._Arginine_and_proline_metabolism,_and_ATP-cone_domain


id: CL:1101
description: Mixed, incl. Adenosine deaminase activity, and Alanine racemase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1101_Mixed,_incl._Adenosine_deaminase_activity,_and_Alanine_racemase,_N-terminal


id: CL:1122
description: Mixed, incl. Protein of unknown function DUF881, and SIS domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1122_Mixed,_incl._Protein_of_unknown_function_DUF881,_and_SIS_domain_superfamily


id: CL:1139
description: Mixed, incl. Aspartyl protease, and rRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1139_Mixed,_incl._Aspartyl_protease,_and_rRNA_pseudouridine_synthesis


id: CL:1154
description: Mixed, incl. Uncharacterised protein family CoxE-like, and ATPase, dynein-related, AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1154_Mixed,_incl._Uncharacterised_protein_family_CoxE-like,_and_ATPase,_dynein-related,_AAA_domain


id: CL:1155
description: Mixed, incl. Uncharacterised protein family CoxE-like, and ATPase, dynein-related, AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1155_Mixed,_incl._Uncharacterised_protein_family_CoxE-like,_and_ATPase,_dynein-related,_AAA_domain


id: CL:1156
description: Mixed, incl. Uncharacterised protein family CoxE-like, and ATPase, dynein-related, AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1156_Mixed,_incl._Uncharacterised_protein_family_CoxE-like,_and_ATPase,_dynein-related,_AAA_domain


id: CL:1169
description: Mixed, incl. K Homology domain, type 1, and Alba-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1169_Mixed,_incl._K_Homology_domain,_type_1,_and_Alba-like_domain_superfamily


id: CL:1179
description: Mixed, incl. FtsK domain, and pfkB family carbohydrate kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1179_Mixed,_incl._FtsK_domain,_and_pfkB_family_carbohydrate_kinase


id: CL:1198
description: Mixed, incl. Deoxyribonucleotide biosynthetic process, and Cysteine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1198_Mixed,_incl._Deoxyribonucleotide_biosynthetic_process,_and_Cysteine_biosynthetic_process


id: CL:1199
description: Mixed, incl. Deoxyribonucleotide biosynthetic process, and Cysteine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1199_Mixed,_incl._Deoxyribonucleotide_biosynthetic_process,_and_Cysteine_biosynthetic_process


id: CL:1200
description: Deoxyribonucleotide biosynthetic process, and rRNA (cytosine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1200_Deoxyribonucleotide_biosynthetic_process,_and_rRNA_(cytosine)_methyltransferase_activity


id: CL:1209
description: Cysteine biosynthetic process, and RNA 2-O ribose methyltransferase substrate binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1209_Cysteine_biosynthetic_process,_and_RNA_2-O_ribose_methyltransferase_substrate_binding


id: CL:1220
description: Mixed, incl. Response to metal ion, and Recombinational repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1220_Mixed,_incl._Response_to_metal_ion,_and_Recombinational_repair


id: CL:1236
description: Mostly uncharacterized, incl. HIT domain, and HhH-GPD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1236_Mostly_uncharacterized,_incl._HIT_domain,_and_HhH-GPD_domain


id: CL:1237
description: Mixed, incl. HIT domain, and HhH-GPD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1237_Mixed,_incl._HIT_domain,_and_HhH-GPD_domain


id: CL:1248
description: Mixed, incl. Peptidoglycan transport, and Positive regulation of gene expression
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1248_Mixed,_incl._Peptidoglycan_transport,_and_Positive_regulation_of_gene_expression


id: CL:1260
description: Mostly uncharacterized, incl. NlpA lipoprotein, and LSM domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1260_Mostly_uncharacterized,_incl._NlpA_lipoprotein,_and_LSM_domain_superfamily


id: CL:1262
description: Mixed, incl. LSM domain superfamily, and Acetoin catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1262_Mixed,_incl._LSM_domain_superfamily,_and_Acetoin_catabolic_process


id: CL:1275
description: Mixed, incl. NlpA lipoprotein, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1275_Mixed,_incl._NlpA_lipoprotein,_and_Sulfur_metabolism


id: CL:1285
description: Mixed, incl. Queuosine biosynthesis, and DNA repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1285_Mixed,_incl._Queuosine_biosynthesis,_and_DNA_repair


id: CL:1286
description: Mixed, incl. Queuosine biosynthesis, and Holliday junction helicase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1286_Mixed,_incl._Queuosine_biosynthesis,_and_Holliday_junction_helicase_complex


id: CL:1287
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1287_Mixed,_incl._Holliday_junction_helicase_complex,_and_Protein-export_membrane_protein_SecD/SecF,_bacterial

description:
  Mixed, incl. Holliday junction helicase complex, and Protein-export membrane protein SecD/SecF, bacterial


id: CL:1289
description: Holliday junction helicase complex, and Major facilitator superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1289_Holliday_junction_helicase_complex,_and_Major_facilitator_superfamily


id: CL:1301
description: Mixed, incl. Protein-export membrane protein SecD/SecF, bacterial, and Queuosine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1301_Mixed,_incl._Protein-export_membrane_protein_SecD/SecF,_bacterial,_and_Queuosine_biosynthesis


id: CL:1314
description: Mixed, incl. FlhB HrpN YscU SpaS Family, and RNA-DNA hybrid ribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1314_Mixed,_incl._FlhB_HrpN_YscU_SpaS_Family,_and_RNA-DNA_hybrid_ribonuclease_activity


id: CL:1323
description: Mostly uncharacterized, incl. NIL domain, and Nitrogen utilization
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1323_Mostly_uncharacterized,_incl._NIL_domain,_and_Nitrogen_utilization


id: CL:1324
description: Mixed, incl. NIL domain, and Nitrogen utilization
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1324_Mixed,_incl._NIL_domain,_and_Nitrogen_utilization


id: CL:1337
description: Mixed, incl. Transglycosylase SLT domain, and Zinc finger, FPG/IleRS-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1337_Mixed,_incl._Transglycosylase_SLT_domain,_and_Zinc_finger,_FPG/IleRS-type


id: CL:1346
description: Mixed, incl. Amino sugar and nucleotide sugar metabolism, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1346_Mixed,_incl._Amino_sugar_and_nucleotide_sugar_metabolism,_and_Polysaccharide_biosynthetic_process


id: CL:1347
description: Mixed, incl. Polysaccharide biosynthetic process, and Amino sugar and nucleotide sugar metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1347_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Amino_sugar_and_nucleotide_sugar_metabolism


id: CL:1348
description: Mixed, incl. Starch and sucrose metabolism, and Mannose-6-phosphate isomerase, type II, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1348_Mixed,_incl._Starch_and_sucrose_metabolism,_and_Mannose-6-phosphate_isomerase,_type_II,_C-terminal


id: CL:1349
description: Mixed, incl. Starch and sucrose metabolism, and Mannose-6-phosphate isomerase, type II, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1349_Mixed,_incl._Starch_and_sucrose_metabolism,_and_Mannose-6-phosphate_isomerase,_type_II,_C-terminal


id: CL:1351
description: Glycogen biosynthetic process, and 4-alpha-glucanotransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1351_Glycogen_biosynthetic_process,_and_4-alpha-glucanotransferase_activity


id: CL:1365
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1365_Mixed,_incl._Mannose-6-phosphate_isomerase,_type_II,_C-terminal,_and_Phosphoglucosamine_mutase_activity

description:
  Mixed, incl. Mannose-6-phosphate isomerase, type II, C-terminal, and Phosphoglucosamine mutase activity


id: CL:137
description: Mixed, incl. Small ribosomal subunit, and Ribosomal protein S13-like, H2TH
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:137_Mixed,_incl._Small_ribosomal_subunit,_and_Ribosomal_protein_S13-like,_H2TH


id: CL:1376
description: Mixed, incl. KR domain, and NagB/RpiA transferase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1376_Mixed,_incl._KR_domain,_and_NagB/RpiA_transferase-like


id: CL:1385
description: Mixed, incl. Polysaccharide biosynthetic process, and Asparagine synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1385_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Asparagine_synthase


id: CL:1387
description: Mixed, incl. NAD dependent epimerase/dehydratase family, and UDP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1387_Mixed,_incl._NAD_dependent_epimerase/dehydratase_family,_and_UDP_binding_domain


id: CL:1390
description: O-Antigen nucleotide sugar biosynthesis, and Asparagine synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1390_O-Antigen_nucleotide_sugar_biosynthesis,_and_Asparagine_synthase


id: CL:1409
description: Mixed, incl. Glycosyl transferase 4-like, and dGTP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1409_Mixed,_incl._Glycosyl_transferase_4-like,_and_dGTP_metabolic_process


id: CL:1420
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and 3D domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1420_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_3D_domain


id: CL:1422
description: Mixed, incl. SpoVG, and GntR, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1422_Mixed,_incl._SpoVG,_and_GntR,_C-terminal


id: CL:1439
description: 3D domain, and TatD related DNase
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1439_3D_domain,_and_TatD_related_DNase


id: CL:1451
description: Mixed, incl. Cell differentiation, and Lipid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1451_Mixed,_incl._Cell_differentiation,_and_Lipid_biosynthetic_process


id: CL:1452
description: Mixed, incl. Cell differentiation, and Lipid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1452_Mixed,_incl._Cell_differentiation,_and_Lipid_biosynthetic_process


id: CL:1453
description: Mixed, incl. Cell differentiation, and Lipid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1453_Mixed,_incl._Cell_differentiation,_and_Lipid_biosynthetic_process


id: CL:1454
description: Mixed, incl. Cell differentiation, and Phospholipid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1454_Mixed,_incl._Cell_differentiation,_and_Phospholipid_metabolic_process


id: CL:1456
description: Cell differentiation, and Sigma factor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1456_Cell_differentiation,_and_Sigma_factor_activity


id: CL:1458
description: Cell differentiation, and Sigma factor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1458_Cell_differentiation,_and_Sigma_factor_activity


id: CL:1459
description: Cell differentiation, and RNA polymerase sigma-70 region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1459_Cell_differentiation,_and_RNA_polymerase_sigma-70_region_4


id: CL:1460
description: Cell differentiation, and RNA polymerase sigma-70 region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1460_Cell_differentiation,_and_RNA_polymerase_sigma-70_region_4


id: CL:1464
description: Sporulation, and RNA polymerase sigma-B/F/G type
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1464_Sporulation,_and_RNA_polymerase_sigma-B/F/G_type


id: CL:1466
description: Sporulation, and RNA polymerase sigma-B/F/G type
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1466_Sporulation,_and_RNA_polymerase_sigma-B/F/G_type


id: CL:1467
description: Mixed, incl. Sporulation stage II, protein R, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1467_Mixed,_incl._Sporulation_stage_II,_protein_R,_and_Sporulation


id: CL:1468
description: Mixed, incl. Sporulation stage II, protein R, and Sporulation stage II, protein P
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1468_Mixed,_incl._Sporulation_stage_II,_protein_R,_and_Sporulation_stage_II,_protein_P


id: CL:1480
description: Mixed, incl. Aspartyl protease, and Sporulation protein YlmC/YmxH
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1480_Mixed,_incl._Aspartyl_protease,_and_Sporulation_protein_YlmC/YmxH


id: CL:1490
description: Mixed, incl. SpoVA, and STAS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1490_Mixed,_incl._SpoVA,_and_STAS_domain


id: CL:1506
description: Stage III sporulation protein AC/AD family, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1506_Stage_III_sporulation_protein_AC/AD_family,_and_Sporulation


id: CL:1507
description: Stage III sporulation protein AC/AD family, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1507_Stage_III_sporulation_protein_AC/AD_family,_and_Sporulation


id: CL:1522
description: Mixed, incl. YabP family, and Peptidase HybD-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1522_Mixed,_incl._YabP_family,_and_Peptidase_HybD-like_domain_superfamily


id: CL:1556
description: CAP domain, and Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1556_CAP_domain,_and_Prosthetic_group_metabolic_process


id: CL:1574
description: Intracellular immature spore, and Septum formation initiator
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1574_Intracellular_immature_spore,_and_Septum_formation_initiator


id: CL:1586
description: Mostly uncharacterized, incl. SASP, alpha/beta-type superfamily, and UBA-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1586_Mostly_uncharacterized,_incl._SASP,_alpha/beta-type_superfamily,_and_UBA-like_superfamily


id: CL:1587
description: Mixed, incl. SASP, alpha/beta-type superfamily, and Shikimate / quinate 5-dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1587_Mixed,_incl._SASP,_alpha/beta-type_superfamily,_and_Shikimate_/_quinate_5-dehydrogenase


id: CL:1588
description: SASP, alpha/beta-type superfamily, and Mycobacterial 4 TMS phage holin, superfamily IV
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1588_SASP,_alpha/beta-type_superfamily,_and_Mycobacterial_4_TMS_phage_holin,_superfamily_IV


id: CL:1597
description: Mixed, incl. Shikimate / quinate 5-dehydrogenase, and Cro/C1-type helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1597_Mixed,_incl._Shikimate_/_quinate_5-dehydrogenase,_and_Cro/C1-type_helix-turn-helix_domain


id: CL:1607
description: Mixed, incl. UBA-like superfamily, and Response to osmotic stress
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1607_Mixed,_incl._UBA-like_superfamily,_and_Response_to_osmotic_stress


id: CL:1624
description: Mixed, incl. Phospholipid metabolism, and Carboxypeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1624_Mixed,_incl._Phospholipid_metabolism,_and_Carboxypeptidase_activity


id: CL:1625
description: Mixed, incl. Phospholipid metabolism, and Intramolecular transferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1625_Mixed,_incl._Phospholipid_metabolism,_and_Intramolecular_transferase_activity


id: CL:1626
description: Mixed, incl. Phospholipid metabolism, and rRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1626_Mixed,_incl._Phospholipid_metabolism,_and_rRNA_pseudouridine_synthesis


id: CL:1627
description: Mostly uncharacterized, incl. rRNA pseudouridine synthesis, and Sporulation stage II, protein P
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1627_Mostly_uncharacterized,_incl._rRNA_pseudouridine_synthesis,_and_Sporulation_stage_II,_protein_P


id: CL:1629
description: Mixed, incl. Sporulation stage II, protein P, and Protein of unknown function DUF1614
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1629_Mixed,_incl._Sporulation_stage_II,_protein_P,_and_Protein_of_unknown_function_DUF1614


id: CL:1641
description: Mixed, incl. rRNA pseudouridine synthesis, and DAHP synthase ferredoxin-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1641_Mixed,_incl._rRNA_pseudouridine_synthesis,_and_DAHP_synthase_ferredoxin-like_domain


id: CL:1659
description: Mixed, incl. 3Fe-4S ferredoxin, and RutC-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1659_Mixed,_incl._3Fe-4S_ferredoxin,_and_RutC-like_superfamily


id: CL:1668
description: Mixed, incl. Carboxypeptidase activity, and Chromosome partition
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1668_Mixed,_incl._Carboxypeptidase_activity,_and_Chromosome_partition


id: CL:167
description: Translation elongation factor EF1B/ribosomal protein S6, and Ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:167_Translation_elongation_factor_EF1B/ribosomal_protein_S6,_and_Ribosome


id: CL:1670
description: Chromosome partition, and Sister chromatid cohesion
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1670_Chromosome_partition,_and_Sister_chromatid_cohesion


id: CL:1693
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1693_Mixed,_incl._Polyprenyl_synthetase,_and_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Mixed, incl. Polyprenyl synthetase, and Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: CL:1694
description: Mixed, incl. Metal ion homeostasis, and Host cell
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1694_Mixed,_incl._Metal_ion_homeostasis,_and_Host_cell


id: CL:1696
description: Mixed, incl. Peptidase M42, and Porin activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1696_Mixed,_incl._Peptidase_M42,_and_Porin_activity


id: CL:1699
description: Mixed, incl. Porin activity, and Glycosyltransferase 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1699_Mixed,_incl._Porin_activity,_and_Glycosyltransferase_2-like


id: CL:1723
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1723_Polyprenyl_synthetase,_and_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Polyprenyl synthetase, and Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: CL:1725
description: Polyprenyl synthetase, and DNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1725_Polyprenyl_synthetase,_and_DNA_catabolic_process


id: CL:1748
description: Mixed, incl. Glucosidase activity, and Carbohydrate binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1748_Mixed,_incl._Glucosidase_activity,_and_Carbohydrate_binding_domain


id: CL:1750
description: Mixed, incl. Glucosidase activity, and Carbohydrate binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1750_Mixed,_incl._Glucosidase_activity,_and_Carbohydrate_binding_domain


id: CL:1751
description: Mixed, incl. Glucosidase activity, and Carbohydrate binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1751_Mixed,_incl._Glucosidase_activity,_and_Carbohydrate_binding_domain


id: CL:1762
description: Mixed, incl. Carbohydrate binding domain, and Putative prokaryotic signal transducing protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1762_Mixed,_incl._Carbohydrate_binding_domain,_and_Putative_prokaryotic_signal_transducing_protein


id: CL:1783
description: Mixed, incl. Anaerobic glutamate catabolic process, and Cupredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1783_Mixed,_incl._Anaerobic_glutamate_catabolic_process,_and_Cupredoxin


id: CL:1784
description: Anaerobic glutamate catabolic process, and CoA enzyme activase uncharacterised domain (DUF2229)
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1784_Anaerobic_glutamate_catabolic_process,_and_CoA_enzyme_activase_uncharacterised_domain_(DUF2229)


id: CL:1786
description: Anaerobic glutamate catabolic process, and CoA enzyme activase uncharacterised domain (DUF2229)
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1786_Anaerobic_glutamate_catabolic_process,_and_CoA_enzyme_activase_uncharacterised_domain_(DUF2229)


id: CL:1807
description: Cupredoxin, and TAT protein transport complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1807_Cupredoxin,_and_TAT_protein_transport_complex


id: CL:1820
description: Mixed, incl. Cilium, and Signal transduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1820_Mixed,_incl._Cilium,_and_Signal_transduction


id: CL:1822
description: Cilium, and Signal transduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1822_Cilium,_and_Signal_transduction


id: CL:1823
description: Cilium, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1823_Cilium,_and_Bacterial_chemotaxis


id: CL:1824
description: Cilium, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1824_Cilium,_and_Bacterial_chemotaxis


id: CL:1825
description: Cilium, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1825_Cilium,_and_Bacterial_chemotaxis


id: CL:1827
description: Cilium, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1827_Cilium,_and_Bacterial_chemotaxis


id: CL:1838
description: Cytoskeletal motor activity, and Flagellar basal body rod FlgEFG protein C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1838_Cytoskeletal_motor_activity,_and_Flagellar_basal_body_rod_FlgEFG_protein_C-terminal


id: CL:1859
description: Bacterial flagellum protein export, and CheC-like family
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1859_Bacterial_flagellum_protein_export,_and_CheC-like_family


id: CL:1892
description: Bacterial-type flagellum hook, and Bacterial flagellum biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1892_Bacterial-type_flagellum_hook,_and_Bacterial_flagellum_biogenesis


id: CL:191
description: L28p-like, and Zinc-binding ribosomal protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:191_L28p-like,_and_Zinc-binding_ribosomal_protein


id: CL:1910
description: CheW-like domain, and Demethylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1910_CheW-like_domain,_and_Demethylation


id: CL:1947
description: Mixed, incl. STAS domain, and Armadillo-type fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1947_Mixed,_incl._STAS_domain,_and_Armadillo-type_fold


id: CL:1958
description: Flagellar assembly protein A, and Cell division protein FtsA
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1958_Flagellar_assembly_protein_A,_and_Cell_division_protein_FtsA


id: CL:1970
description: Phosphorelay signal transduction system, and HD-GYP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1970_Phosphorelay_signal_transduction_system,_and_HD-GYP_domain


id: CL:1973
description: Phosphorelay signal transduction system, and PAS fold-4
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1973_Phosphorelay_signal_transduction_system,_and_PAS_fold-4


id: CL:1975
description: Nucleotide cyclase, and Domain present in phytochromes and cGMP-specific phosphodiesterases.
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1975_Nucleotide_cyclase,_and_Domain_present_in_phytochromes_and_cGMP-specific_phosphodiesterases.


id: CL:1994
description: OmpR/PhoB-type DNA-binding domain, and His Kinase A (phosphoacceptor) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:1994_OmpR/PhoB-type_DNA-binding_domain,_and_His_Kinase_A_(phosphoacceptor)_domain


id: CL:2015
description: Mixed, incl. DNA binding HTH domain, AraC-type, and PocR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2015_Mixed,_incl._DNA_binding_HTH_domain,_AraC-type,_and_PocR_domain


id: CL:2028
description: Mixed, incl. Pilus organization, and Horizontal gene transfer
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2028_Mixed,_incl._Pilus_organization,_and_Horizontal_gene_transfer


id: CL:2029
description: Mixed, incl. Pilus organization, and Horizontal gene transfer
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2029_Mixed,_incl._Pilus_organization,_and_Horizontal_gene_transfer


id: CL:2031
description: Pilus organization, and Protein transport across the cell outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2031_Pilus_organization,_and_Protein_transport_across_the_cell_outer_membrane


id: CL:2033
description: Type II/IV secretion system protein, and Type II secretion system GspF domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2033_Type_II/IV_secretion_system_protein,_and_Type_II_secretion_system_GspF_domain_superfamily


id: CL:206
description: Mixed, incl. Peptidase M24, and AMP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:206_Mixed,_incl._Peptidase_M24,_and_AMP_metabolic_process


id: CL:2063
description: Mixed, incl. Horizontal gene transfer, and DNA replication initiation
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2063_Mixed,_incl._Horizontal_gene_transfer,_and_DNA_replication_initiation


id: CL:2076
description: Mixed, incl. Regulation of cell death, and Type II secretion system (T2SS), protein F
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2076_Mixed,_incl._Regulation_of_cell_death,_and_Type_II_secretion_system_(T2SS),_protein_F


id: CL:2077
description: Mixed, incl. Regulation of cell death, and Type II secretion system (T2SS), protein F
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2077_Mixed,_incl._Regulation_of_cell_death,_and_Type_II_secretion_system_(T2SS),_protein_F


id: CL:2081
description: Type II secretion system (T2SS), protein F, and SAF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2081_Type_II_secretion_system_(T2SS),_protein_F,_and_SAF_domain


id: CL:2096
description: Mixed, incl. Helix_turn_helix, Lux Regulon, and Protein of unknown function DUF421
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2096_Mixed,_incl._Helix_turn_helix,_Lux_Regulon,_and_Protein_of_unknown_function_DUF421


id: CL:2111
description: Mixed, incl. Signal, and ABC transporter-like, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2111_Mixed,_incl._Signal,_and_ABC_transporter-like,_ATP-binding_domain


id: CL:2112
description: Mixed, incl. Signal, and ABC transporter-like, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2112_Mixed,_incl._Signal,_and_ABC_transporter-like,_ATP-binding_domain


id: CL:2114
description: Mixed, incl. S-layer homology domain, and Copper amine oxidase-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2114_Mixed,_incl._S-layer_homology_domain,_and_Copper_amine_oxidase-like,_N-terminal


id: CL:2115
description: Mixed, incl. S-layer homology domain, and Copper amine oxidase-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2115_Mixed,_incl._S-layer_homology_domain,_and_Copper_amine_oxidase-like,_N-terminal


id: CL:2117
description: Mixed, incl. S-layer homology domain, and Copper amine oxidase-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2117_Mixed,_incl._S-layer_homology_domain,_and_Copper_amine_oxidase-like,_N-terminal


id: CL:2118
description: Mixed, incl. S-layer homology domain, and Copper amine oxidase-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2118_Mixed,_incl._S-layer_homology_domain,_and_Copper_amine_oxidase-like,_N-terminal


id: CL:2120
description: S-layer homology domain, and Copper amine oxidase-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2120_S-layer_homology_domain,_and_Copper_amine_oxidase-like,_N-terminal


id: CL:2121
description: Galactose-binding-like domain superfamily, and Copper amine oxidase-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2121_Galactose-binding-like_domain_superfamily,_and_Copper_amine_oxidase-like,_N-terminal


id: CL:2130
description: S-layer homology domain, and S-layer homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2130_S-layer_homology_domain,_and_S-layer_homology_domain


id: CL:2149
description: Mixed, incl. Cell outer membrane, and Domain of unknown function DUF4430
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2149_Mixed,_incl._Cell_outer_membrane,_and_Domain_of_unknown_function_DUF4430


id: CL:2172
description: Mixed, incl. Peptidase M23, and PDZ domain 6
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2172_Mixed,_incl._Peptidase_M23,_and_PDZ_domain_6


id: CL:2174
description: Mixed, incl. PDZ domain 6, and Domain of unknown function DUF2179
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2174_Mixed,_incl._PDZ_domain_6,_and_Domain_of_unknown_function_DUF2179


id: CL:220
description: Mixed, incl. tRNA methylation, and K homology domain superfamily, prokaryotic type
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:220_Mixed,_incl._tRNA_methylation,_and_K_homology_domain_superfamily,_prokaryotic_type


id: CL:2202
description: Mixed, incl. RND efflux pump, membrane fusion protein, barrel-sandwich domain, and Ami_3
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2202_Mixed,_incl._RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain,_and_Ami_3


id: CL:2203
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2203_Mixed,_incl._RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain,_and_MacB,_ATP-binding_domain

description:
  Mixed, incl. RND efflux pump, membrane fusion protein, barrel-sandwich domain, and MacB, ATP-binding domain


id: CL:2204
description: Mixed, incl. RND efflux pump, membrane fusion protein, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2204_Mixed,_incl._RND_efflux_pump,_membrane_fusion_protein,_and_MacB,_ATP-binding_domain


id: CL:2206
description: Mixed, incl. RND efflux pump, membrane fusion protein, and Outer membrane efflux protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2206_Mixed,_incl._RND_efflux_pump,_membrane_fusion_protein,_and_Outer_membrane_efflux_protein


id: CL:2207
description: Mixed, incl. Biotin-lipoyl like, and Yip1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2207_Mixed,_incl._Biotin-lipoyl_like,_and_Yip1_domain


id: CL:2221
description: Mixed, incl. Outer membrane efflux protein, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2221_Mixed,_incl._Outer_membrane_efflux_protein,_and_MacB,_ATP-binding_domain


id: CL:2242
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2242_Mixed,_incl._ABC-2_family_transporter_protein,_and_DNA-binding_HTH_domain,_TetR-type,_conserved_site

description:
  Mixed, incl. ABC-2 family transporter protein, and DNA-binding HTH domain, TetR-type, conserved site


id: CL:2256
description: Ami_3, and Domain of unknown function DUF4367
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2256_Ami_3,_and_Domain_of_unknown_function_DUF4367


id: CL:2271
description: Mixed, incl. RNA polymerase sigma-70 like, and Cell surface
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2271_Mixed,_incl._RNA_polymerase_sigma-70_like,_and_Cell_surface


id: CL:2273
description: Mixed, incl. Aldehyde catabolic process, and Anaerobic sulphatase maturase, radical SAM
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2273_Mixed,_incl._Aldehyde_catabolic_process,_and_Anaerobic_sulphatase_maturase,_radical_SAM


id: CL:2289
description: Mixed, incl. RNA polymerase sigma-70 like, and Cell surface
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2289_Mixed,_incl._RNA_polymerase_sigma-70_like,_and_Cell_surface


id: CL:2302
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2302_Mostly_uncharacterized,_incl._Fluoride_transmembrane_transport,_and_ClpP/crotonase-like_domain_superfamily

description:
  Mostly uncharacterized, incl. Fluoride transmembrane transport, and ClpP/crotonase-like domain superfamily


id: CL:2303
description: Mixed, incl. Fluoride transmembrane transport, and Nucleus
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2303_Mixed,_incl._Fluoride_transmembrane_transport,_and_Nucleus


id: CL:2304
description: Mixed, incl. Fluoride transmembrane transport, and Peptidase U32
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2304_Mixed,_incl._Fluoride_transmembrane_transport,_and_Peptidase_U32


id: CL:2306
description: Mixed, incl. Peptidase U32, and DUF34/NIF3 superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2306_Mixed,_incl._Peptidase_U32,_and_DUF34/NIF3_superfamily


id: CL:231
description: SRP54-type protein, helical bundle domain, and Protein-transporting ATPase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:231_SRP54-type_protein,_helical_bundle_domain,_and_Protein-transporting_ATPase_activity


id: CL:2324
description: Mixed, incl. AI-2E family transporter, and PRC-barrel domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2324_Mixed,_incl._AI-2E_family_transporter,_and_PRC-barrel_domain


id: CL:2342
description: Mixed, incl. Yip1 domain, and Metalloprotease
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2342_Mixed,_incl._Yip1_domain,_and_Metalloprotease


id: CL:2361
description: Mixed, incl. Arginine and proline metabolism, and Polyol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2361_Mixed,_incl._Arginine_and_proline_metabolism,_and_Polyol_metabolic_process


id: CL:2362
description: Mixed, incl. Arginine and proline metabolism, and Histidinol-phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2362_Mixed,_incl._Arginine_and_proline_metabolism,_and_Histidinol-phosphatase_activity


id: CL:2363
description: Arginine and proline metabolism, and Purine salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2363_Arginine_and_proline_metabolism,_and_Purine_salvage


id: CL:2365
description: Polyamine biosynthesis, and Ureohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2365_Polyamine_biosynthesis,_and_Ureohydrolase


id: CL:2381
description: Mixed, incl. Purine salvage, and Pentose catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2381_Mixed,_incl._Purine_salvage,_and_Pentose_catabolic_process


id: CL:2390
description: Mixed, incl. Histidinol-phosphatase activity, and HTH domain AraC-type, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2390_Mixed,_incl._Histidinol-phosphatase_activity,_and_HTH_domain_AraC-type,_conserved_site


id: CL:2391
description: Mixed, incl. HTH domain AraC-type, conserved site, and YheA/YmcA-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2391_Mixed,_incl._HTH_domain_AraC-type,_conserved_site,_and_YheA/YmcA-like_domain_superfamily


id: CL:2407
description: Histidinol-phosphatase activity, and Inositol phosphate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2407_Histidinol-phosphatase_activity,_and_Inositol_phosphate_metabolism


id: CL:2417
description: Mixed, incl. Alditol metabolic process, and Queuosine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2417_Mixed,_incl._Alditol_metabolic_process,_and_Queuosine_metabolic_process


id: CL:2418
description: Mixed, incl. Alditol metabolic process, and Primosome complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2418_Mixed,_incl._Alditol_metabolic_process,_and_Primosome_complex


id: CL:2419
description: Mixed, incl. Alditol metabolic process, and Alkaline shock protein Asp23
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2419_Mixed,_incl._Alditol_metabolic_process,_and_Alkaline_shock_protein_Asp23


id: CL:242
description: RNA polymerase, and SNF2, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:242_RNA_polymerase,_and_SNF2,_N-terminal


id: CL:2442
description: Mixed, incl. DUF34/NIF3 superfamily, and tRNA methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2442_Mixed,_incl._DUF34/NIF3_superfamily,_and_tRNA_methylation


id: CL:2454
description: Mixed, incl. Protein tyrosine kinase activity, and Protein tyrosine phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2454_Mixed,_incl._Protein_tyrosine_kinase_activity,_and_Protein_tyrosine_phosphatase_activity


id: CL:2455
description: Mixed, incl. Protein tyrosine kinase activity, and Protein tyrosine phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2455_Mixed,_incl._Protein_tyrosine_kinase_activity,_and_Protein_tyrosine_phosphatase_activity


id: CL:2456
description: Mixed, incl. Telomere recombination, and Putative manganese efflux pump
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2456_Mixed,_incl._Telomere_recombination,_and_Putative_manganese_efflux_pump


id: CL:2465
description: Protein tyrosine kinase activity, and Protein tyrosine phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2465_Protein_tyrosine_kinase_activity,_and_Protein_tyrosine_phosphatase_activity


id: CL:2475
description: Mixed, incl. Zinc finger, MqsA-type, and Protein of unknown function DUF4258
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2475_Mixed,_incl._Zinc_finger,_MqsA-type,_and_Protein_of_unknown_function_DUF4258


id: CL:2490
description: Mixed, incl. Oxidoreductase activity, and Pyruvate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2490_Mixed,_incl._Oxidoreductase_activity,_and_Pyruvate_metabolism


id: CL:2491
description: Mixed, incl. Electron transport chain, and Formate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2491_Mixed,_incl._Electron_transport_chain,_and_Formate_metabolic_process


id: CL:2493
description: Mixed, incl. Electron transport chain, and 4Fe-4S ferredoxin-type, iron-sulphur binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2493_Mixed,_incl._Electron_transport_chain,_and_4Fe-4S_ferredoxin-type,_iron-sulphur_binding_domain


id: CL:2494
description: Mixed, incl. Electron transport chain, and 4Fe-4S ferredoxin-type, iron-sulphur binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2494_Mixed,_incl._Electron_transport_chain,_and_4Fe-4S_ferredoxin-type,_iron-sulphur_binding_domain


id: CL:2495
description: Electron transport chain, and Formate dehydrogenase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2495_Electron_transport_chain,_and_Formate_dehydrogenase_complex


id: CL:2496
description: Oxidoreductase activity, acting on NAD(P)H, and Oxidoreductase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2496_Oxidoreductase_activity,_acting_on_NAD(P)H,_and_Oxidoreductase_complex


id: CL:2497
description: Thioredoxin-like superfamily, and 2Fe-2S iron-sulfur cluster binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2497_Thioredoxin-like_superfamily,_and_2Fe-2S_iron-sulfur_cluster_binding_domain


id: CL:2500
description: Thioredoxin-like superfamily, and Quinone binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2500_Thioredoxin-like_superfamily,_and_Quinone_binding


id: CL:2501
description: Oxidoreductase activity, acting on NAD(P)H, and NuoE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2501_Oxidoreductase_activity,_acting_on_NAD(P)H,_and_NuoE_domain


id: CL:2502
description: Oxidoreductase activity, acting on NAD(P)H, and NuoE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2502_Oxidoreductase_activity,_acting_on_NAD(P)H,_and_NuoE_domain


id: CL:2504
description: 2 iron, 2 sulfur cluster binding, and NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2504_2_iron,_2_sulfur_cluster_binding,_and_NADH-ubiquinone_oxidoreductase-F_iron-sulfur_binding_region


id: CL:2521
description: Oxidoreductase activity, acting on NAD(P)H
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2521_Oxidoreductase_activity,_acting_on_NAD(P)H


id: CL:2531
description: Thioredoxin-like superfamily, and Dihydroprymidine dehydrogenase domain II
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2531_Thioredoxin-like_superfamily,_and_Dihydroprymidine_dehydrogenase_domain_II


id: CL:2542
description: Thioredoxin-like [2Fe-2S] ferredoxin, and Formate dehydrogenase, alpha subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2542_Thioredoxin-like_[2Fe-2S]_ferredoxin,_and_Formate_dehydrogenase,_alpha_subunit


id: CL:2559
description: Formate metabolic process, and Proton-conducting membrane transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2559_Formate_metabolic_process,_and_Proton-conducting_membrane_transporter


id: CL:2561
description: Mixed, incl. NADH dehydrogenase, and NADH-quinone oxidoreductase, subunit D
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2561_Mixed,_incl._NADH_dehydrogenase,_and_NADH-quinone_oxidoreductase,_subunit_D


id: CL:2581
description: Mixed, incl. Ferredoxin hydrogenase activity, and Protein maturation
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2581_Mixed,_incl._Ferredoxin_hydrogenase_activity,_and_Protein_maturation


id: CL:2583
description: ATPase complex, and Protein maturation
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2583_ATPase_complex,_and_Protein_maturation


id: CL:2608
description: Mixed, incl. Cellular respiration, and Pyruvate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2608_Mixed,_incl._Cellular_respiration,_and_Pyruvate_metabolism


id: CL:2609
description: Mixed, incl. Molybdopterin cofactor binding, and Pyruvate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2609_Mixed,_incl._Molybdopterin_cofactor_binding,_and_Pyruvate_metabolism


id: CL:2610
description: Mixed, incl. Molybdopterin cofactor binding, and Nitrotoluene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2610_Mixed,_incl._Molybdopterin_cofactor_binding,_and_Nitrotoluene_degradation


id: CL:2611
description: Mixed, incl. Nitrotoluene degradation, and Formate dehydrogenase (NAD+) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2611_Mixed,_incl._Nitrotoluene_degradation,_and_Formate_dehydrogenase_(NAD+)_activity


id: CL:2612
description: Formate dehydrogenase (NAD+) activity, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2612_Formate_dehydrogenase_(NAD+)_activity,_and_4Fe-4S_dicluster_domain


id: CL:2621
description: Formylmethanofuran dehydrogenase, subunit E domain, and Nitrotoluene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2621_Formylmethanofuran_dehydrogenase,_subunit_E_domain,_and_Nitrotoluene_degradation


id: CL:2630
description: Molydopterin dinucleotide binding domain, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2630_Molydopterin_dinucleotide_binding_domain,_and_Sulfur_metabolism


id: CL:2640
description: Malic oxidoreductase, and Citrate cycle (TCA cycle)
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2640_Malic_oxidoreductase,_and_Citrate_cycle_(TCA_cycle)


id: CL:2652
description: Mixed, incl. 4Fe-4S dicluster domain, and Acetylene hydratase, MopB domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2652_Mixed,_incl._4Fe-4S_dicluster_domain,_and_Acetylene_hydratase,_MopB_domain


id: CL:2654
description: Mixed, incl. 4Fe-4S binding domain, and Acetylene hydratase, MopB domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2654_Mixed,_incl._4Fe-4S_binding_domain,_and_Acetylene_hydratase,_MopB_domain


id: CL:2671
description: Mixed, incl. Glutamate biosynthetic process, and FAD/NAD(P)-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2671_Mixed,_incl._Glutamate_biosynthetic_process,_and_FAD/NAD(P)-binding_domain


id: CL:2687
description: Mixed, incl. Rubredoxin-like domain, and Mrp/NBP35 ATP-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2687_Mixed,_incl._Rubredoxin-like_domain,_and_Mrp/NBP35_ATP-binding_protein


id: CL:2699
description: Formamide metabolic process, and FAD dependent oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2699_Formamide_metabolic_process,_and_FAD_dependent_oxidoreductase


id: CL:2712
description: Mixed, incl. Branched-chain amino acid metabolic process, and Pyruvate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2712_Mixed,_incl._Branched-chain_amino_acid_metabolic_process,_and_Pyruvate_metabolism


id: CL:2713
description: Mixed, incl. Branched-chain amino acid metabolic process, and Pyruvate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2713_Mixed,_incl._Branched-chain_amino_acid_metabolic_process,_and_Pyruvate_metabolism


id: CL:2714
description: Branched-chain amino acid metabolic process, and Fatty acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2714_Branched-chain_amino_acid_metabolic_process,_and_Fatty_acid_metabolism


id: CL:2715
description: Branched-chain amino acid metabolic process, and Citrate cycle (TCA cycle)
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2715_Branched-chain_amino_acid_metabolic_process,_and_Citrate_cycle_(TCA_cycle)


id: CL:2717
description: Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2717_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:2734
description: Aminotransferase class IV, and LeuA allosteric (dimerisation) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2734_Aminotransferase_class_IV,_and_LeuA_allosteric_(dimerisation)_domain


id: CL:2747
description: Citrate cycle (TCA cycle), and Metallochaperone activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2747_Citrate_cycle_(TCA_cycle),_and_Metallochaperone_activity


id: CL:2795
description: Mixed, incl. Iron-type alcohol dehydrogenase-like, and Propanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2795_Mixed,_incl._Iron-type_alcohol_dehydrogenase-like,_and_Propanoate_metabolism


id: CL:2796
description: Mixed, incl. Iron-type alcohol dehydrogenase-like, and Taurine and hypotaurine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2796_Mixed,_incl._Iron-type_alcohol_dehydrogenase-like,_and_Taurine_and_hypotaurine_metabolism


id: CL:2798
description: Iron-type alcohol dehydrogenase-like, and Aldehyde dehydrogenase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2798_Iron-type_alcohol_dehydrogenase-like,_and_Aldehyde_dehydrogenase_domain


id: CL:2819
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2819_Mixed,_incl._Organic_radical-activating_enzymes,_and_Calcineurin-like_phosphoesterase_domain,_lpxH-type

description:
  Mixed, incl. Organic radical-activating enzymes, and Calcineurin-like phosphoesterase domain, lpxH-type


id: CL:2830
description: Mixed, incl. CoA-ligase activity, and Indolepyruvate oxidoreductase subunit IorA
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2830_Mixed,_incl._CoA-ligase_activity,_and_Indolepyruvate_oxidoreductase_subunit_IorA


id: CL:2832
description: CoA-ligase activity, and Indolepyruvate oxidoreductase subunit IorA
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2832_CoA-ligase_activity,_and_Indolepyruvate_oxidoreductase_subunit_IorA


id: CL:2853
description: Prosthetic group metabolic process, and Inorganic anion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2853_Prosthetic_group_metabolic_process,_and_Inorganic_anion_transport


id: CL:2854
description: Prosthetic group metabolic process, and Inorganic anion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2854_Prosthetic_group_metabolic_process,_and_Inorganic_anion_transport


id: CL:2857
description: Prosthetic group metabolic process, and Toxin catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2857_Prosthetic_group_metabolic_process,_and_Toxin_catabolic_process


id: CL:2860
description: Molybdenum cofactor biosynthesis, and Toxin catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2860_Molybdenum_cofactor_biosynthesis,_and_Toxin_catabolic_process


id: CL:2863
description: MoaC family, and GTP 3,8-cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2863_MoaC_family,_and_GTP_3,8-cyclase_activity


id: CL:2879
description: Molybdenum cofactor guanylyltransferase, and MoeA, N-terminal and linker domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2879_Molybdenum_cofactor_guanylyltransferase,_and_MoeA,_N-terminal_and_linker_domain


id: CL:289
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:289_Aminoacyl-tRNA_synthetase,_class_I,_conserved_site,_and_Aminoacyl-tRNA_synthetase,_class_II_(G/_P/_S/T)

description:
  Aminoacyl-tRNA synthetase, class I, conserved site, and Aminoacyl-tRNA synthetase, class II (G/ P/ S/T)


id: CL:2908
description: Inorganic anion transport, and Polyamine transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2908_Inorganic_anion_transport,_and_Polyamine_transport


id: CL:292
description: Aminoacyl-tRNA synthetase, class I, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:292_Aminoacyl-tRNA_synthetase,_class_I,_conserved_site


id: CL:2927
description: Polyamine transport, and Molybdate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2927_Polyamine_transport,_and_Molybdate_ion_transport


id: CL:2940
description: Aldehyde ferredoxin oxidoreductase, N-terminal domain, and BCCT transporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2940_Aldehyde_ferredoxin_oxidoreductase,_N-terminal_domain,_and_BCCT_transporter_family


id: CL:2955
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2955_Mixed,_incl._Transferase_activity,_transferring_one-carbon_groups,_and_Microbial_metabolism_in_diverse_environments

description:
  Mixed, incl. Transferase activity, transferring one-carbon groups, and Microbial metabolism in diverse environments


id: CL:2956
description: Mixed, incl. One-carbon metabolic process, and Glycine, serine and threonine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2956_Mixed,_incl._One-carbon_metabolic_process,_and_Glycine,_serine_and_threonine_metabolism


id: CL:2957
description: One-carbon metabolic process, and Glycine, serine and threonine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2957_One-carbon_metabolic_process,_and_Glycine,_serine_and_threonine_metabolism


id: CL:2958
description: Mixed, incl. Tetrahydrofolate interconversion, and Glycine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2958_Mixed,_incl._Tetrahydrofolate_interconversion,_and_Glycine_catabolic_process


id: CL:2961
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2961_Mixed,_incl._CO_dehydrogenase/acetyl-CoA_synthase_delta_subunit,_TIM_barrel,_and_Nickel_insertion_ATPase/GTPase_(CO_dehydrogenase_maturation_factor),_CooC_type

description:
  Mixed, incl. CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel, and Nickel insertion ATPase/GTPase (CO dehydrogenase maturation factor), CooC type


id: CL:2965
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2965_CO_dehydrogenase/acetyl-CoA_synthase_delta_subunit,_TIM_barrel,_and_Carbon-monoxide_dehydrogenase_(acceptor)_activity

description:
  CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel, and Carbon-monoxide dehydrogenase (acceptor) activity


id: CL:2986
description: Glycine metabolic process, and Tetrahydrofolate interconversion
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:2986_Glycine_metabolic_process,_and_Tetrahydrofolate_interconversion


id: CL:3002
description: Tetrahydrofolate interconversion
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3002_Tetrahydrofolate_interconversion


id: CL:3013
description: Cobalamin binding, and Threonine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3013_Cobalamin_binding,_and_Threonine_biosynthetic_process


id: CL:3014
description: Threonine biosynthetic process, and Selenocompound metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3014_Threonine_biosynthetic_process,_and_Selenocompound_metabolism


id: CL:3037
description: Methyltransferase cognate corrinoid protein, and Pterin-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3037_Methyltransferase_cognate_corrinoid_protein,_and_Pterin-binding_domain


id: CL:3050
description: Mixed, incl. Lipoic acid metabolism, and Cysteine-rich domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3050_Mixed,_incl._Lipoic_acid_metabolism,_and_Cysteine-rich_domain


id: CL:3052
description: Mixed, incl. Lipoic acid metabolism, and acetyl-CoA biosynthetic process from pyruvate
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3052_Mixed,_incl._Lipoic_acid_metabolism,_and_acetyl-CoA_biosynthetic_process_from_pyruvate


id: CL:3053
description: Mixed, incl. Lipoic acid metabolism, and acetyl-CoA biosynthetic process from pyruvate
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3053_Mixed,_incl._Lipoic_acid_metabolism,_and_acetyl-CoA_biosynthetic_process_from_pyruvate


id: CL:3055
description: acetyl-CoA biosynthetic process from pyruvate, and Tryptophan metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3055_acetyl-CoA_biosynthetic_process_from_pyruvate,_and_Tryptophan_metabolism


id: CL:3065
description: Mixed, incl. Lipoic acid metabolism, and Nitrogen utilization
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3065_Mixed,_incl._Lipoic_acid_metabolism,_and_Nitrogen_utilization


id: CL:3076
description: Mixed, incl. GroES-like superfamily, and Tubulin/FtsZ-like, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3076_Mixed,_incl._GroES-like_superfamily,_and_Tubulin/FtsZ-like,_C-terminal_domain


id: CL:3091
description: 4Fe-4S dicluster domain, and FAD-linked oxidase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3091_4Fe-4S_dicluster_domain,_and_FAD-linked_oxidase,_C-terminal


id: CL:3107
description: Mixed, incl. MttB-like superfamily, and HydE/PylB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3107_Mixed,_incl._MttB-like_superfamily,_and_HydE/PylB-like


id: CL:3108
description: Mixed, incl. MttB-like superfamily, and HydE/PylB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3108_Mixed,_incl._MttB-like_superfamily,_and_HydE/PylB-like


id: CL:3110
description: Mixed, incl. MttB-like superfamily, and HydE/PylB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3110_Mixed,_incl._MttB-like_superfamily,_and_HydE/PylB-like


id: CL:3111
description: MttB-like superfamily, and Dimethylamine methyltransferase MtbB
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3111_MttB-like_superfamily,_and_Dimethylamine_methyltransferase_MtbB


id: CL:3130
description: MttB-like superfamily, and HydE/PylB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3130_MttB-like_superfamily,_and_HydE/PylB-like


id: CL:3152
description: Methyltransferase, class B, and Dimerisation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3152_Methyltransferase,_class_B,_and_Dimerisation_domain


id: CL:3167
description: Mixed, incl. Nitrogen metabolism, and PucR C-terminal helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3167_Mixed,_incl._Nitrogen_metabolism,_and_PucR_C-terminal_helix-turn-helix_domain


id: CL:3169
description: Mixed, incl. Nitrogen metabolism, and Glutamate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3169_Mixed,_incl._Nitrogen_metabolism,_and_Glutamate_catabolic_process


id: CL:3171
description: Nitrogen metabolism, and Nitrogen regulatory protein PII, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3171_Nitrogen_metabolism,_and_Nitrogen_regulatory_protein_PII,_conserved_site


id: CL:3173
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3173_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_and_Nitrogen_regulatory_protein_PII,_conserved_site

description:
  Oxidoreductase activity, acting on iron-sulfur proteins as donors, and Nitrogen regulatory protein PII, conserved site


id: CL:3177
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3177_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: CL:318
description: Mostly uncharacterized, incl. Ribosomal small subunit biogenesis, and PUA domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:318_Mostly_uncharacterized,_incl._Ribosomal_small_subunit_biogenesis,_and_PUA_domain_superfamily


id: CL:320
description: Mixed, incl. Ribosomal protein L7Ae/L30e/S12e/Gadd45, and Transcription antitermination
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:320_Mixed,_incl._Ribosomal_protein_L7Ae/L30e/S12e/Gadd45,_and_Transcription_antitermination


id: CL:3212
description: Glutamate catabolic process, and Terpene catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3212_Glutamate_catabolic_process,_and_Terpene_catabolic_process


id: CL:3231
description: Mixed, incl. PucR C-terminal helix-turn-helix domain, and Cytochrome complex assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3231_Mixed,_incl._PucR_C-terminal_helix-turn-helix_domain,_and_Cytochrome_complex_assembly


id: CL:3232
description: Mixed, incl. CdaR, GGDEF-like domain, and Pyridine nucleotide-disulphide oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3232_Mixed,_incl._CdaR,_GGDEF-like_domain,_and_Pyridine_nucleotide-disulphide_oxidoreductase


id: CL:3234
description: CdaR, GGDEF-like domain, and Pyridine nucleotide-disulphide oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3234_CdaR,_GGDEF-like_domain,_and_Pyridine_nucleotide-disulphide_oxidoreductase


id: CL:3248
description: Mixed, incl. YbaB/EbfC DNA-binding family, and Ligase activity, forming nitrogen-metal bonds
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3248_Mixed,_incl._YbaB/EbfC_DNA-binding_family,_and_Ligase_activity,_forming_nitrogen-metal_bonds


id: CL:3261
description: Cytochrome complex assembly, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3261_Cytochrome_complex_assembly,_and_Methyltransferase_domain


id: CL:3270
description: Mixed, incl. PhoU domain, and Cold shock, CspA
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3270_Mixed,_incl._PhoU_domain,_and_Cold_shock,_CspA


id: CL:3281
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3281_Mostly_uncharacterized,_incl._Ubiquinone_and_other_terpenoid-quinone_biosynthesis,_and_Secondary_active_transmembrane_transporter_activity

description:
  Mostly uncharacterized, incl. Ubiquinone and other terpenoid-quinone biosynthesis, and Secondary active transmembrane transporter activity


id: CL:3282
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3282_Mostly_uncharacterized,_incl._Ubiquinone_and_other_terpenoid-quinone_biosynthesis,_and_Secondary_active_transmembrane_transporter_activity

description:
  Mostly uncharacterized, incl. Ubiquinone and other terpenoid-quinone biosynthesis, and Secondary active transmembrane transporter activity


id: CL:3283
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3283_Mostly_uncharacterized,_incl._Secondary_active_transmembrane_transporter_activity,_and_Sodium/solute_symporter

description:
  Mostly uncharacterized, incl. Secondary active transmembrane transporter activity, and Sodium/solute symporter


id: CL:3284
description: Mixed, incl. L-serine ammonia-lyase activity, and Aminopeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3284_Mixed,_incl._L-serine_ammonia-lyase_activity,_and_Aminopeptidase


id: CL:3286
description: Mixed, incl. L-serine ammonia-lyase activity, and Aminopeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3286_Mixed,_incl._L-serine_ammonia-lyase_activity,_and_Aminopeptidase


id: CL:3315
description: Mixed, incl. Sodium/solute symporter, and Na+/H+ antiporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3315_Mixed,_incl._Sodium/solute_symporter,_and_Na+/H+_antiporter_family


id: CL:3317
description: Sodium/solute symporter, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3317_Sodium/solute_symporter,_and_4Fe-4S_dicluster_domain


id: CL:3338
description: Mixed, incl. Ubiquinone and other terpenoid-quinone biosynthesis, and Aldolase/RraA
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3338_Mixed,_incl._Ubiquinone_and_other_terpenoid-quinone_biosynthesis,_and_Aldolase/RraA


id: CL:3339
description: Mixed, incl. Aldolase/RraA, and 4-hydroxyproline metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3339_Mixed,_incl._Aldolase/RraA,_and_4-hydroxyproline_metabolic_process


id: CL:3341
description: Mixed, incl. GntR, C-terminal, and Carbohydrate binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3341_Mixed,_incl._GntR,_C-terminal,_and_Carbohydrate_binding


id: CL:3355
description: Aldolase/RraA, and 4-hydroxyproline metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3355_Aldolase/RraA,_and_4-hydroxyproline_metabolic_process


id: CL:3366
description: Ubiquinone and other terpenoid-quinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3366_Ubiquinone_and_other_terpenoid-quinone_biosynthesis


id: CL:338
description: Mixed, incl. Cytidylyltransferase activity, and De novo CTP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:338_Mixed,_incl._Cytidylyltransferase_activity,_and_De_novo_CTP_biosynthetic_process


id: CL:3380
description: Mixed, incl. Xylose isomerase-like superfamily, and Multi antimicrobial extrusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3380_Mixed,_incl._Xylose_isomerase-like_superfamily,_and_Multi_antimicrobial_extrusion_protein


id: CL:3396
description: Mixed, incl. Thiamine metabolic process, and Iron ion transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3396_Mixed,_incl._Thiamine_metabolic_process,_and_Iron_ion_transmembrane_transport


id: CL:3397
description: Mixed, incl. Iron ion transmembrane transport, and GerMN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3397_Mixed,_incl._Iron_ion_transmembrane_transport,_and_GerMN_domain


id: CL:3398
description: Mixed, incl. Iron ion transmembrane transport, and TIM-barrel domain, IGPS-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3398_Mixed,_incl._Iron_ion_transmembrane_transport,_and_TIM-barrel_domain,_IGPS-like


id: CL:3399
description: Mixed, incl. Iron ion transmembrane transport, and TIM-barrel domain, IGPS-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3399_Mixed,_incl._Iron_ion_transmembrane_transport,_and_TIM-barrel_domain,_IGPS-like


id: CL:3401
description: Iron ion transmembrane transport, and Ferrous iron transporter FeoA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3401_Iron_ion_transmembrane_transport,_and_Ferrous_iron_transporter_FeoA_domain


id: CL:3415
description: TIM-barrel domain, IGPS-like, and Alditol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3415_TIM-barrel_domain,_IGPS-like,_and_Alditol_metabolic_process


id: CL:3425
description: Iron ion transmembrane transport, and HhH-GPD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3425_Iron_ion_transmembrane_transport,_and_HhH-GPD_domain


id: CL:3442
description: Mixed, incl. VanW like protein, and Methionine synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3442_Mixed,_incl._VanW_like_protein,_and_Methionine_synthase_activity


id: CL:3460
description: Thiamine biosynthetic process, and ThiF family
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3460_Thiamine_biosynthetic_process,_and_ThiF_family


id: CL:3463
description: Thiamine biosynthetic process, and ThiF family
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3463_Thiamine_biosynthetic_process,_and_ThiF_family


id: CL:3498
description: Transport, and Porphyrin and chlorophyll metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3498_Transport,_and_Porphyrin_and_chlorophyll_metabolism


id: CL:3499
description: Porphyrin and chlorophyll metabolism, and Transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3499_Porphyrin_and_chlorophyll_metabolism,_and_Transport


id: CL:3500
description: Mixed, incl. Porphyrin and chlorophyll metabolism, and Transition metal ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3500_Mixed,_incl._Porphyrin_and_chlorophyll_metabolism,_and_Transition_metal_ion_transport


id: CL:3502
description: Porphyrin and chlorophyll metabolism, and Cobalt ion transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3502_Porphyrin_and_chlorophyll_metabolism,_and_Cobalt_ion_transmembrane_transporter_activity


id: CL:3503
description: Porphyrin and chlorophyll metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3503_Porphyrin_and_chlorophyll_metabolism


id: CL:3509
description: Tetrapyrrole methylase, subdomain 2, and Cobalamin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3509_Tetrapyrrole_methylase,_subdomain_2,_and_Cobalamin_metabolic_process


id: CL:3543
description: Porphyrin biosynthesis, and Siroheme decarboxylase , AsnC-like ligand binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3543_Porphyrin_biosynthesis,_and_Siroheme_decarboxylase_,_AsnC-like_ligand_binding_domain


id: CL:3564
description: Cobalt ion transmembrane transporter activity, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3564_Cobalt_ion_transmembrane_transporter_activity,_and_Cobalt_transport_protein


id: CL:3566
description: Cobalt ion transport, and Cobalt transport protein ATP-binding subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3566_Cobalt_ion_transport,_and_Cobalt_transport_protein_ATP-binding_subunit


id: CL:358
description: Peptidyl-glutamine methylation, and RF-1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:358_Peptidyl-glutamine_methylation,_and_RF-1_domain


id: CL:3590
description: Mixed, incl. Periplasmic binding protein, and Chlorophyll metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3590_Mixed,_incl._Periplasmic_binding_protein,_and_Chlorophyll_metabolic_process


id: CL:3591
description: Mixed, incl. Heme transport, and ABC transporter, permease protein, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3591_Mixed,_incl._Heme_transport,_and_ABC_transporter,_permease_protein,_BtuC-like


id: CL:3592
description: Mixed, incl. Heme transport, and ABC transporter, permease protein, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3592_Mixed,_incl._Heme_transport,_and_ABC_transporter,_permease_protein,_BtuC-like


id: CL:3593
description: Heme transport, and ABC transporter, permease protein, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3593_Heme_transport,_and_ABC_transporter,_permease_protein,_BtuC-like


id: CL:3604
description: Mixed, incl. Putative heavy-metal chelation, and Purine nucleobase catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3604_Mixed,_incl._Putative_heavy-metal_chelation,_and_Purine_nucleobase_catabolic_process


id: CL:3615
description: Mixed, incl. YaeB-like, and ABC 3 transport family
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3615_Mixed,_incl._YaeB-like,_and_ABC_3_transport_family


id: CL:3624
description: Mixed, incl. Chlorophyll metabolic process, and ABC-2 type transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3624_Mixed,_incl._Chlorophyll_metabolic_process,_and_ABC-2_type_transporter


id: CL:3626
description: Mixed, incl. Anaerobic sulphatase maturase, radical SAM, and FecCD transport family
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3626_Mixed,_incl._Anaerobic_sulphatase_maturase,_radical_SAM,_and_FecCD_transport_family


id: CL:3651
description: Mixed, incl. Quorum sensing, and ABC transporters
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3651_Mixed,_incl._Quorum_sensing,_and_ABC_transporters


id: CL:3652
description: Mixed, incl. Latent infection - Other responses of Mtb to phagocytosis, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3652_Mixed,_incl._Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis,_and_Peptide_transport


id: CL:3654
description: Latent infection - Other responses of Mtb to phagocytosis, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3654_Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis,_and_Peptide_transport


id: CL:3657
description: Nickel cation transmembrane transporter activity, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3657_Nickel_cation_transmembrane_transporter_activity,_and_Peptide_transport


id: CL:3659
description: Nickel cation transmembrane transporter activity, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3659_Nickel_cation_transmembrane_transporter_activity,_and_Peptide_transport


id: CL:3661
description: Nickel cation transmembrane transporter activity, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3661_Nickel_cation_transmembrane_transporter_activity,_and_Peptide_transport


id: CL:3663
description: beta-Lactam resistance, and Oligopeptide transport permease C-like, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3663_beta-Lactam_resistance,_and_Oligopeptide_transport_permease_C-like,_N-terminal_domain


id: CL:367
description: Mixed, incl. Protein folding, and FAD/NAD(P)-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:367_Mixed,_incl._Protein_folding,_and_FAD/NAD(P)-binding_domain


id: CL:368
description: Mixed, incl. Protein folding, and FAD/NAD(P)-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:368_Mixed,_incl._Protein_folding,_and_FAD/NAD(P)-binding_domain


id: CL:3681
description: Peptide transport, and Nickel cation transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3681_Peptide_transport,_and_Nickel_cation_transmembrane_transporter_activity


id: CL:369
description: Protein folding, and Serine protease
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:369_Protein_folding,_and_Serine_protease


id: CL:3701
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3701_Oligopeptide/dipeptide_transporter,_C-terminal_region,_and_Solute-binding_protein_family_5,_conserved_site

description:
  Oligopeptide/dipeptide transporter, C-terminal region, and Solute-binding protein family 5, conserved site


id: CL:3724
description: Mixed, incl. MarR-type HTH domain, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3724_Mixed,_incl._MarR-type_HTH_domain,_and_Methyltransferase_domain


id: CL:3726
description: Mixed, incl. CobN/Magnesium Chelatase, and MotA/TolQ/ExbB proton channel
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3726_Mixed,_incl._CobN/Magnesium_Chelatase,_and_MotA/TolQ/ExbB_proton_channel


id: CL:3747
description: Mixed, incl. Transposase IS200 like, and Oligosaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3747_Mixed,_incl._Transposase_IS200_like,_and_Oligosaccharide_biosynthetic_process


id: CL:3763
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3763_Mixed,_incl._Glycine_betaine_transport,_and_ABC-type_glycine_betaine_transport_system,_substrate-binding_domain

description:
  Mixed, incl. Glycine betaine transport, and ABC-type glycine betaine transport system, substrate-binding domain


id: CL:3781
description: Amino acid transport, and Branched-chain amino acid ATP-binding cassette transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3781_Amino_acid_transport,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter


id: CL:3784
description: Branched-chain amino acid ATP-binding cassette transporter, and Branched-chain amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3784_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_and_Branched-chain_amino_acid_transport


id: CL:3802
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3802_Mixed,_incl._ABC-type_amino_acid_transporter_activity,_and_Solute-binding_protein_family_3/N-terminal_domain_of_MltF

description:
  Mixed, incl. ABC-type amino acid transporter activity, and Solute-binding protein family 3/N-terminal domain of MltF


id: CL:3821
description: Mostly uncharacterized, incl. Vesicle membrane, and Non-homologous end-joining
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3821_Mostly_uncharacterized,_incl._Vesicle_membrane,_and_Non-homologous_end-joining


id: CL:3822
description: Mostly uncharacterized, incl. Non-homologous end-joining, and 4Fe4S-binding SPASM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3822_Mostly_uncharacterized,_incl._Non-homologous_end-joining,_and_4Fe4S-binding_SPASM_domain


id: CL:3823
description: Mixed, incl. 4Fe4S-binding SPASM domain, and Type 1 protein exporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3823_Mixed,_incl._4Fe4S-binding_SPASM_domain,_and_Type_1_protein_exporter


id: CL:3824
description: Mixed, incl. Type 1 protein exporter, and MarR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3824_Mixed,_incl._Type_1_protein_exporter,_and_MarR-type_HTH_domain


id: CL:3826
description: Type 1 protein exporter, and MarR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3826_Type_1_protein_exporter,_and_MarR-type_HTH_domain


id: CL:3847
description: 4Fe4S-binding SPASM domain, and ABC-2 type transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3847_4Fe4S-binding_SPASM_domain,_and_ABC-2_type_transporter


id: CL:3859
description: Mixed, incl. Peptidase complex, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3859_Mixed,_incl._Peptidase_complex,_and_DNA_integration


id: CL:3860
description: Peptidase complex, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3860_Peptidase_complex,_and_DNA_integration


id: CL:3869
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3869_Mixed,_incl._Helix_turn_helix_gluconate_operon_transcriptional_repressor,_and_ABC_transporter-like,_ATP-binding_domain

description:
  Mixed, incl. Helix_turn_helix gluconate operon transcriptional repressor, and ABC transporter-like, ATP-binding domain


id: CL:3885
description: Mixed, incl. Vesicle membrane, and Gas vesicle protein GvpL/GvpF
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3885_Mixed,_incl._Vesicle_membrane,_and_Gas_vesicle_protein_GvpL/GvpF


id: CL:3889
description: Vesicle membrane, and Gas vesicle protein GvpL/GvpF
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3889_Vesicle_membrane,_and_Gas_vesicle_protein_GvpL/GvpF


id: CL:3891
description: Vesicle membrane, and Gas vesicle protein GvpL/GvpF
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3891_Vesicle_membrane,_and_Gas_vesicle_protein_GvpL/GvpF


id: CL:390
description: FAD/NAD(P)-binding domain, and Disulfide bond
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:390_FAD/NAD(P)-binding_domain,_and_Disulfide_bond


id: CL:3914
description: Mostly uncharacterized, incl. Nitrogen fixation, and Iron-sulfur cluster assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3914_Mostly_uncharacterized,_incl._Nitrogen_fixation,_and_Iron-sulfur_cluster_assembly


id: CL:3915
description: Mostly uncharacterized, incl. Iron-sulfur cluster assembly, and Transcription regulator Rrf2
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3915_Mostly_uncharacterized,_incl._Iron-sulfur_cluster_assembly,_and_Transcription_regulator_Rrf2


id: CL:3916
description: Mixed, incl. Iron-sulfur cluster assembly, and Transcription regulator Rrf2
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3916_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Transcription_regulator_Rrf2


id: CL:3917
description: Mixed, incl. Iron-sulfur cluster assembly, and Transcription regulator Rrf2
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3917_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Transcription_regulator_Rrf2


id: CL:3918
description: Mixed, incl. Iron-sulfur cluster assembly, and Transcription regulator Rrf2
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3918_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Transcription_regulator_Rrf2


id: CL:3920
description: Mixed, incl. Cysteine desulfurase, and NifU-like N terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3920_Mixed,_incl._Cysteine_desulfurase,_and_NifU-like_N_terminal_domain


id: CL:393
description: Disulfide oxidoreductase activity, and NADH:flavin oxidoreductase / NADH oxidase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:393_Disulfide_oxidoreductase_activity,_and_NADH:flavin_oxidoreductase_/_NADH_oxidase_family


id: CL:3934
description: Cysteine desulfurase activity, and Iron-sulfur cluster assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3934_Cysteine_desulfurase_activity,_and_Iron-sulfur_cluster_assembly


id: CL:3946
description: Mixed, incl. Selenium, and DsrEFH-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3946_Mixed,_incl._Selenium,_and_DsrEFH-like


id: CL:3961
description: Mixed, incl. Amidohydrolase-related, and Putative heavy-metal chelation
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3961_Mixed,_incl._Amidohydrolase-related,_and_Putative_heavy-metal_chelation


id: CL:3963
description: Mixed, incl. Putative heavy-metal chelation, and tRNA thio-modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3963_Mixed,_incl._Putative_heavy-metal_chelation,_and_tRNA_thio-modification


id: CL:3984
description: Mixed, incl. Protein of unknown function DUF3842, and CO dehydrogenase accessory protein CooT
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3984_Mixed,_incl._Protein_of_unknown_function_DUF3842,_and_CO_dehydrogenase_accessory_protein_CooT


id: CL:3994
description: Mixed, incl. RNA 3-end processing, and YjbQ-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3994_Mixed,_incl._RNA_3-end_processing,_and_YjbQ-like_superfamily


id: CL:3996
description: Mixed, incl. RNA 3-end processing, and Alpha/Beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:3996_Mixed,_incl._RNA_3-end_processing,_and_Alpha/Beta_hydrolase_fold


id: CL:4017
description: Mixed, incl. Nitrogen fixation, and CobQ/CobB/MinD/ParA nucleotide binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4017_Mixed,_incl._Nitrogen_fixation,_and_CobQ/CobB/MinD/ParA_nucleotide_binding_domain


id: CL:4019
description: Mixed, incl. Nitrogen fixation, and CobQ/CobB/MinD/ParA nucleotide binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4019_Mixed,_incl._Nitrogen_fixation,_and_CobQ/CobB/MinD/ParA_nucleotide_binding_domain


id: CL:4021
description: MTH1175 domain, and CobQ/CobB/MinD/ParA nucleotide binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4021_MTH1175_domain,_and_CobQ/CobB/MinD/ParA_nucleotide_binding_domain


id: CL:4023
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4023_Mixed,_incl._Uncharacterised_protein_family_UPF0251,_and_Methanocaldococcus_jannaschii_dihydropteroate_synthase-like,_MBL-fold_metallo_hydrolase_domain

description:
  Mixed, incl. Uncharacterised protein family UPF0251, and Methanocaldococcus jannaschii dihydropteroate synthase-like, MBL-fold metallo hydrolase domain


id: CL:4033
description: MTH1175 domain, and Anion-transporting ATPase
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4033_MTH1175_domain,_and_Anion-transporting_ATPase


id: CL:4069
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4069_Mixed,_incl._Winged_helix_DNA-binding_domain_superfamily,_and_Heavy_metal-associated_domain_superfamily

description:
  Mixed, incl. Winged helix DNA-binding domain superfamily, and Heavy metal-associated domain superfamily


id: CL:4070
description: Mostly uncharacterized, incl. Heavy metal-associated domain superfamily, and DGC domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4070_Mostly_uncharacterized,_incl._Heavy_metal-associated_domain_superfamily,_and_DGC_domain


id: CL:4071
description: Mixed, incl. Heavy metal-associated domain superfamily, and DGC domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4071_Mixed,_incl._Heavy_metal-associated_domain_superfamily,_and_DGC_domain


id: CL:4072
description: Mixed, incl. Heavy metal-associated domain superfamily, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4072_Mixed,_incl._Heavy_metal-associated_domain_superfamily,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:4075
description: Heavy metal-associated domain superfamily, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4075_Heavy_metal-associated_domain_superfamily,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:4091
description: DGC domain, and Response to arsenic-containing substance
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4091_DGC_domain,_and_Response_to_arsenic-containing_substance


id: CL:4101
description: Mixed, incl. Ferric-uptake regulator, and Protein ubiquitination
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4101_Mixed,_incl._Ferric-uptake_regulator,_and_Protein_ubiquitination


id: CL:4103
description: Mixed, incl. Ferric-uptake regulator, and Cell adhesion
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4103_Mixed,_incl._Ferric-uptake_regulator,_and_Cell_adhesion


id: CL:411
description: Mixed, incl. TPR repeat, and Threonyl/alanyl tRNA synthetase, SAD
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:411_Mixed,_incl._TPR_repeat,_and_Threonyl/alanyl_tRNA_synthetase,_SAD


id: CL:4125
description: Mixed, incl. Regulation of growth, and Peptidase S26
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4125_Mixed,_incl._Regulation_of_growth,_and_Peptidase_S26


id: CL:4126
description: Mixed, incl. Lipoprotein metabolic process, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4126_Mixed,_incl._Lipoprotein_metabolic_process,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:4150
description: Mostly uncharacterized, incl. Rescue of stalled ribosome, and Serine-type endopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4150_Mostly_uncharacterized,_incl._Rescue_of_stalled_ribosome,_and_Serine-type_endopeptidase_activity


id: CL:4152
description: Mostly uncharacterized, incl. Rescue of stalled ribosome, and Recombinational repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4152_Mostly_uncharacterized,_incl._Rescue_of_stalled_ribosome,_and_Recombinational_repair


id: CL:4153
description: Mixed, incl. Rescue of stalled ribosome, and Recombinational repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4153_Mixed,_incl._Rescue_of_stalled_ribosome,_and_Recombinational_repair


id: CL:4156
description: Mixed, incl. Rescue of stalled ribosome, and Lon protease (S16) C-terminal proteolytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4156_Mixed,_incl._Rescue_of_stalled_ribosome,_and_Lon_protease_(S16)_C-terminal_proteolytic_domain


id: CL:4178
description: Mixed, incl. Transposition, and dGTP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4178_Mixed,_incl._Transposition,_and_dGTP_metabolic_process


id: CL:4190
description: Mixed, incl. Export across plasma membrane, and Pyridoxamine 5-phosphate oxidase, putative
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4190_Mixed,_incl._Export_across_plasma_membrane,_and_Pyridoxamine_5-phosphate_oxidase,_putative


id: CL:4201
description: Mostly uncharacterized, incl. DNA repair complex, and Peptide cross-linking
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4201_Mostly_uncharacterized,_incl._DNA_repair_complex,_and_Peptide_cross-linking


id: CL:4202
description: Mixed, incl. DNA repair complex, and Peptide cross-linking
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4202_Mixed,_incl._DNA_repair_complex,_and_Peptide_cross-linking


id: CL:4203
description: Mixed, incl. Peptide cross-linking, and DNA repair complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4203_Mixed,_incl._Peptide_cross-linking,_and_DNA_repair_complex


id: CL:4204
description: Mixed, incl. DNA repair complex, and Rad50/SbcC-type AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4204_Mixed,_incl._DNA_repair_complex,_and_Rad50/SbcC-type_AAA_domain


id: CL:4215
description: Mixed, incl. Peptide cross-linking, and Regulation of cell death
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4215_Mixed,_incl._Peptide_cross-linking,_and_Regulation_of_cell_death


id: CL:4227
description: Mixed, incl. FtsK domain, and Rad50/SbcC-type AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4227_Mixed,_incl._FtsK_domain,_and_Rad50/SbcC-type_AAA_domain


id: CL:4243
description: Mixed, incl. MTH1187/YkoF-like, and ArgJ-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4243_Mixed,_incl._MTH1187/YkoF-like,_and_ArgJ-like_domain_superfamily


id: CL:4258
description: Mixed, incl. Sigma-54 interaction domain, conserved site, and Signaling
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4258_Mixed,_incl._Sigma-54_interaction_domain,_conserved_site,_and_Signaling


id: CL:4260
description: Mixed, incl. Quorum sensing, and DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4260_Mixed,_incl._Quorum_sensing,_and_DDE_transposase_sub-family


id: CL:4262
description: Mixed, incl. Staphylococcal AgrD, and Phosphorelay signal transduction system
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4262_Mixed,_incl._Staphylococcal_AgrD,_and_Phosphorelay_signal_transduction_system


id: CL:427
description: Mixed, incl. Homologous recombination, and DNA repair complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:427_Mixed,_incl._Homologous_recombination,_and_DNA_repair_complex


id: CL:428
description: Homologous recombination, and DNA excision
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:428_Homologous_recombination,_and_DNA_excision


id: CL:4282
description: Mixed, incl. Quorum sensing, and Signal transduction histidine kinase, sporulation regulator SpoOB
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4282_Mixed,_incl._Quorum_sensing,_and_Signal_transduction_histidine_kinase,_sporulation_regulator_SpoOB


id: CL:4285
description: Quorum sensing, and Signal transduction histidine kinase, sporulation regulator SpoOB
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4285_Quorum_sensing,_and_Signal_transduction_histidine_kinase,_sporulation_regulator_SpoOB


id: CL:4305
description: Sigma-54 interaction domain, conserved site, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4305_Sigma-54_interaction_domain,_conserved_site,_and_Sigma-70,_region_4


id: CL:4309
description: Sigma-54 interaction domain, conserved site, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4309_Sigma-54_interaction_domain,_conserved_site,_and_Sigma-70,_region_4


id: CL:4338
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4338_Mixed,_incl._Nucleic_acid_phosphodiester_bond_hydrolysis,_and_Regulation_of_RNA_biosynthetic_process

description:
  Mixed, incl. Nucleic acid phosphodiester bond hydrolysis, and Regulation of RNA biosynthetic process


id: CL:4340
description: Mixed, incl. Nucleic acid phosphodiester bond hydrolysis, and Toxin-antitoxin complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4340_Mixed,_incl._Nucleic_acid_phosphodiester_bond_hydrolysis,_and_Toxin-antitoxin_complex


id: CL:4341
description: Mixed, incl. Nuclease activity, and Homeobox-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4341_Mixed,_incl._Nuclease_activity,_and_Homeobox-like_domain_superfamily


id: CL:4342
description: Mostly uncharacterized, incl. HTH-like domain, and Transposase
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4342_Mostly_uncharacterized,_incl._HTH-like_domain,_and_Transposase


id: CL:4343
description: Mixed, incl. HTH-like domain, and Transposase
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4343_Mixed,_incl._HTH-like_domain,_and_Transposase


id: CL:4344
description: Mostly uncharacterized, incl. Transposase (putative), YhgA-like, and Membrane protein complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4344_Mostly_uncharacterized,_incl._Transposase_(putative),_YhgA-like,_and_Membrane_protein_complex


id: CL:4346
description: Mostly uncharacterized, incl. Transposase (putative), YhgA-like, and Light-harvesting complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4346_Mostly_uncharacterized,_incl._Transposase_(putative),_YhgA-like,_and_Light-harvesting_complex


id: CL:4348
description: Mostly uncharacterized, incl. Light-harvesting complex, and Helicase HerA, central domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4348_Mostly_uncharacterized,_incl._Light-harvesting_complex,_and_Helicase_HerA,_central_domain


id: CL:4352
description: Mixed, incl. Light-harvesting complex, and Helicase HerA, central domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4352_Mixed,_incl._Light-harvesting_complex,_and_Helicase_HerA,_central_domain


id: CL:4384
description: Mixed, incl. VanW like protein, and RNA 5-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4384_Mixed,_incl._VanW_like_protein,_and_RNA_5-end_processing


id: CL:4397
description: Transposase, and HTH-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4397_Transposase,_and_HTH-like_domain


id: CL:4414
description: Mixed, incl. YvrJ protein family, and Protein of unknown function DUF1659
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4414_Mixed,_incl._YvrJ_protein_family,_and_Protein_of_unknown_function_DUF1659


id: CL:4415
description: Mixed, incl. YvrJ protein family, and Protein of unknown function DUF1659
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4415_Mixed,_incl._YvrJ_protein_family,_and_Protein_of_unknown_function_DUF1659


id: CL:4418
description: Mixed, incl. Protein of unknown function DUF1659, and Protein of unknown function DUF2922
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4418_Mixed,_incl._Protein_of_unknown_function_DUF1659,_and_Protein_of_unknown_function_DUF2922


id: CL:4437
description: Mixed, incl. TPR repeat, and Uroporphyrinogen decarboxylase (URO-D)
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4437_Mixed,_incl._TPR_repeat,_and_Uroporphyrinogen_decarboxylase_(URO-D)


id: CL:4453
description: Mixed, incl. PIN domain, and Toxin-antitoxin complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4453_Mixed,_incl._PIN_domain,_and_Toxin-antitoxin_complex


id: CL:4454
description: Mixed, incl. PIN domain, and Nucleotidyltransferase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4454_Mixed,_incl._PIN_domain,_and_Nucleotidyltransferase_superfamily


id: CL:4455
description: Mixed, incl. PIN domain, and Nucleotidyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4455_Mixed,_incl._PIN_domain,_and_Nucleotidyltransferase_domain


id: CL:4456
description: Mixed, incl. PIN domain, and Nucleotidyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4456_Mixed,_incl._PIN_domain,_and_Nucleotidyltransferase_domain


id: CL:4457
description: Mixed, incl. Protein of unknown function DUF433, and PIN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4457_Mixed,_incl._Protein_of_unknown_function_DUF433,_and_PIN_domain


id: CL:4460
description: Mixed, incl. Nucleotidyltransferase domain, and PKD domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4460_Mixed,_incl._Nucleotidyltransferase_domain,_and_PKD_domain_superfamily


id: CL:4479
description: Mixed, incl. Protein of unknown function DUF433, and YefM-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4479_Mixed,_incl._Protein_of_unknown_function_DUF433,_and_YefM-like_superfamily


id: CL:449
description: DNA-directed DNA polymerase, and Mismatched DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:449_DNA-directed_DNA_polymerase,_and_Mismatched_DNA_binding


id: CL:4495
description: Mixed, incl. HEPN domain, and DNA methylase, N-4 cytosine-specific, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4495_Mixed,_incl._HEPN_domain,_and_DNA_methylase,_N-4_cytosine-specific,_conserved_site


id: CL:4505
description: Mixed, incl. Toxin, and Regulation of cell growth
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4505_Mixed,_incl._Toxin,_and_Regulation_of_cell_growth


id: CL:4507
description: Mixed, incl. Toxin, and Regulation of cell growth
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4507_Mixed,_incl._Toxin,_and_Regulation_of_cell_growth


id: CL:4528
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4528_Mixed,_incl._Uncharacterised_conserved_protein,_UCP020217,_and_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters

description:
  Mixed, incl. Uncharacterised conserved protein, UCP020217, and Endodeoxyribonuclease activity, producing 5-phosphomonoesters


id: CL:4541
description: Toxin-antitoxin complex, and Protein of unknown function DUF1670
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4541_Toxin-antitoxin_complex,_and_Protein_of_unknown_function_DUF1670


id: CL:4543
description: TTHA1013/TTHA0281-like, and mRNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4543_TTHA1013/TTHA0281-like,_and_mRNA_binding


id: CL:4564
description: mRNA interferase PemK-like, and Arc-type ribbon-helix-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4564_mRNA_interferase_PemK-like,_and_Arc-type_ribbon-helix-helix


id: CL:4584
description: Mostly uncharacterized, incl. KaiC domain, and B12 binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4584_Mostly_uncharacterized,_incl._KaiC_domain,_and_B12_binding_domain


id: CL:4585
description: Mixed, incl. KaiC domain, and B12 binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4585_Mixed,_incl._KaiC_domain,_and_B12_binding_domain


id: CL:4587
description: Mixed, incl. UbiC transcription regulator-associated, and CobW/HypB/UreG, nucleotide-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4587_Mixed,_incl._UbiC_transcription_regulator-associated,_and_CobW/HypB/UreG,_nucleotide-binding_domain


id: CL:4610
description: Mostly uncharacterized, incl. SNF2, N-terminal, and Zinc finger, MqsA-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4610_Mostly_uncharacterized,_incl._SNF2,_N-terminal,_and_Zinc_finger,_MqsA-type


id: CL:4612
description: Mixed, incl. SNF2, N-terminal, and Zinc finger, MqsA-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4612_Mixed,_incl._SNF2,_N-terminal,_and_Zinc_finger,_MqsA-type


id: CL:4633
description: Mixed, incl. Response to virus, and Transposition
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4633_Mixed,_incl._Response_to_virus,_and_Transposition


id: CL:4634
description: Mixed, incl. Transposition, and Protein serine/threonine phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4634_Mixed,_incl._Transposition,_and_Protein_serine/threonine_phosphatase_activity


id: CL:4636
description: Mixed, incl. Potassium ion transport, and Transposition
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4636_Mixed,_incl._Potassium_ion_transport,_and_Transposition


id: CL:4638
description: Mixed, incl. Potassium ion transport, and Transposase IS605, OrfB, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4638_Mixed,_incl._Potassium_ion_transport,_and_Transposase_IS605,_OrfB,_C-terminal


id: CL:4639
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4639_Mostly_uncharacterized,_incl._tRNA_thiolation_protein,_TtcA/Ctu1_type,_and_Transposase_domain_(DUF772)

description:
  Mostly uncharacterized, incl. tRNA thiolation protein, TtcA/Ctu1 type, and Transposase domain (DUF772)


id: CL:4640
description: Mostly uncharacterized, incl. Transposase domain (DUF772), and Transposase IS200 like
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4640_Mostly_uncharacterized,_incl._Transposase_domain_(DUF772),_and_Transposase_IS200_like


id: CL:4641
description: Mixed, incl. Transposase domain (DUF772), and Transposase IS200 like
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4641_Mixed,_incl._Transposase_domain_(DUF772),_and_Transposase_IS200_like


id: CL:4643
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4643_Mixed,_incl._DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity,_and_Chitin_binding

description:
  Mixed, incl. DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity, and Chitin binding


id: CL:4653
description: Transposase domain (DUF772), and Transposase IS200 like
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4653_Transposase_domain_(DUF772),_and_Transposase_IS200_like


id: CL:4662
description: Mixed, incl. Polymerase beta, nucleotidyltransferase, and Unfolded protein binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4662_Mixed,_incl._Polymerase_beta,_nucleotidyltransferase,_and_Unfolded_protein_binding


id: CL:4672
description: Mixed, incl. F420-0 metabolic process, and MerR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4672_Mixed,_incl._F420-0_metabolic_process,_and_MerR-type_HTH_domain


id: CL:468
description: Mixed, incl. DNA topoisomerase, type IIA-like domain superfamily, and RNA 5-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:468_Mixed,_incl._DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_RNA_5-end_processing


id: CL:4689
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4689_Mixed,_incl._Potassium_ion_transmembrane_transport,_and_Extracellular_polysaccharide_metabolic_process

description:
  Mixed, incl. Potassium ion transmembrane transport, and Extracellular polysaccharide metabolic process


id: CL:4721
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4721_Mixed,_incl._Protein_serine/threonine_phosphatase_activity,_and_RNA-directed_DNA_polymerase_activity

description:
  Mixed, incl. Protein serine/threonine phosphatase activity, and RNA-directed DNA polymerase activity


id: CL:4722
description: Mixed, incl. Protein serine/threonine phosphatase activity, and Recombinase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4722_Mixed,_incl._Protein_serine/threonine_phosphatase_activity,_and_Recombinase,_conserved_site


id: CL:4724
description: Mixed, incl. Protein serine/threonine phosphatase activity, and Cell pole
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4724_Mixed,_incl._Protein_serine/threonine_phosphatase_activity,_and_Cell_pole


id: CL:4727
description: Mixed, incl. Uncharacterised protein family UPF0236, and RNA-directed DNA polymerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4727_Mixed,_incl._Uncharacterised_protein_family_UPF0236,_and_RNA-directed_DNA_polymerase


id: CL:4752
description: Mixed, incl. IrrE N-terminal-like domain, and Recombinase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4752_Mixed,_incl._IrrE_N-terminal-like_domain,_and_Recombinase,_conserved_site


id: CL:4761
description: RNA-directed DNA polymerase activity, and Peptidase M29
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4761_RNA-directed_DNA_polymerase_activity,_and_Peptidase_M29


id: CL:4774
description: Response to virus, and CRISPR-associated protein Cas8b
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4774_Response_to_virus,_and_CRISPR-associated_protein_Cas8b


id: CL:4775
description: Response to virus, and CRISPR-associated protein Cas8b
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4775_Response_to_virus,_and_CRISPR-associated_protein_Cas8b


id: CL:4777
description: Mixed, incl. RAMP superfamily, and CRISPR-associated protein, Cas6
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4777_Mixed,_incl._RAMP_superfamily,_and_CRISPR-associated_protein,_Cas6


id: CL:4802
description: Maintenance of DNA repeat elements, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4802_Maintenance_of_DNA_repeat_elements,_and_Response_to_virus


id: CL:4819
description: Mixed, incl. Response to virus, and CRISPR-associated Cas3-type HD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4819_Mixed,_incl._Response_to_virus,_and_CRISPR-associated_Cas3-type_HD_domain


id: CL:4820
description: Mixed, incl. CRISPR-associated Cas3-type HD domain, and DEAD/DEAH box helicase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4820_Mixed,_incl._CRISPR-associated_Cas3-type_HD_domain,_and_DEAD/DEAH_box_helicase_domain


id: CL:4833
description: Antiviral defense, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4833_Antiviral_defense,_and_Response_to_virus


id: CL:4846
description: Mixed, incl. Transposase activity, and Protein of unknown function DUF1670
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4846_Mixed,_incl._Transposase_activity,_and_Protein_of_unknown_function_DUF1670


id: CL:4847
description: Mixed, incl. Transposase activity, and Protein of unknown function DUF1670
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4847_Mixed,_incl._Transposase_activity,_and_Protein_of_unknown_function_DUF1670


id: CL:4848
description: Mixed, incl. Transposase, IS4-like, and Protein of unknown function DUF1670
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4848_Mixed,_incl._Transposase,_IS4-like,_and_Protein_of_unknown_function_DUF1670


id: CL:4850
description: Mixed, incl. Transposase, IS4-like, and Domain of unknown function (DUF4277)
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4850_Mixed,_incl._Transposase,_IS4-like,_and_Domain_of_unknown_function_(DUF4277)


id: CL:4852
description: Mixed, incl. Transposase, IS4-like, and Domain of unknown function (DUF4277)
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4852_Mixed,_incl._Transposase,_IS4-like,_and_Domain_of_unknown_function_(DUF4277)


id: CL:4853
description: Transposase, IS4-like, and Alcohol binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4853_Transposase,_IS4-like,_and_Alcohol_binding


id: CL:4856
description: Transposase, IS4-like, and Domain of unknown function (DUF4277)
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4856_Transposase,_IS4-like,_and_Domain_of_unknown_function_(DUF4277)


id: CL:487
description: Mixed, incl. Protein serine/threonine phosphatase activity, and Forkhead associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:487_Mixed,_incl._Protein_serine/threonine_phosphatase_activity,_and_Forkhead_associated_domain


id: CL:4874
description: Mixed, incl. Protein of unknown function DUF1670, and Domain of unknown function DUF4277
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4874_Mixed,_incl._Protein_of_unknown_function_DUF1670,_and_Domain_of_unknown_function_DUF4277


id: CL:490
description: Mixed, incl. Forkhead associated domain, and Serine/Threonine protein kinases, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:490_Mixed,_incl._Forkhead_associated_domain,_and_Serine/Threonine_protein_kinases,_catalytic_domain


id: CL:4905
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4905_Mixed,_incl._Lambda_repressor-like,_DNA-binding_domain_superfamily,_and_tRNA-guanine_transglycosylation

description:
  Mixed, incl. Lambda repressor-like, DNA-binding domain superfamily, and tRNA-guanine transglycosylation


id: CL:4906
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4906_Mixed,_incl._Lambda_repressor-like,_DNA-binding_domain_superfamily,_and_Domain_of_unknown_function_DUF4277

description:
  Mixed, incl. Lambda repressor-like, DNA-binding domain superfamily, and Domain of unknown function DUF4277


id: CL:4917
description: Mixed, incl. tRNA-guanine transglycosylation, and Oxidized base lesion DNA N-glycosylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4917_Mixed,_incl._tRNA-guanine_transglycosylation,_and_Oxidized_base_lesion_DNA_N-glycosylase_activity


id: CL:492
description: Mixed, incl. NusB family, and Formyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:492_Mixed,_incl._NusB_family,_and_Formyl_transferase


id: CL:4958
description: Mixed, incl. Primosome complex, and DDE transposase retroviral integrase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4958_Mixed,_incl._Primosome_complex,_and_DDE_transposase_retroviral_integrase_sub-family


id: CL:4959
description: Mixed, incl. Primosome complex, and DDE transposase retroviral integrase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4959_Mixed,_incl._Primosome_complex,_and_DDE_transposase_retroviral_integrase_sub-family


id: CL:4960
description: Mixed, incl. Primosome complex, and DDE transposase retroviral integrase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4960_Mixed,_incl._Primosome_complex,_and_DDE_transposase_retroviral_integrase_sub-family


id: CL:4961
description: IstB-like ATP-binding protein, and DDE transposase retroviral integrase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4961_IstB-like_ATP-binding_protein,_and_DDE_transposase_retroviral_integrase_sub-family


id: CL:4964
description: IstB-like ATP-binding protein, and DDE transposase retroviral integrase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4964_IstB-like_ATP-binding_protein,_and_DDE_transposase_retroviral_integrase_sub-family


id: CL:4987
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:4987_Mixed,_incl._Polymerase_beta,_nucleotidyltransferase,_and_DNA_helicase_DnaB,_N-terminal/DNA_primase_DnaG,_C-terminal

description:
  Mixed, incl. Polymerase beta, nucleotidyltransferase, and DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal


id: CL:5001
description: Mixed, incl. Desulfoferrodoxin, and Ribonuclease HepT-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5001_Mixed,_incl._Desulfoferrodoxin,_and_Ribonuclease_HepT-like


id: CL:5010
description: Mixed, incl. Cupin domain, and MerR transcriptional regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5010_Mixed,_incl._Cupin_domain,_and_MerR_transcriptional_regulator


id: CL:5024
description: Mixed, incl. NodB homology domain, and Chitin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5024_Mixed,_incl._NodB_homology_domain,_and_Chitin_binding


id: CL:5026
description: Mixed, incl. NodB homology domain, and Chitin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5026_Mixed,_incl._NodB_homology_domain,_and_Chitin_binding


id: CL:5028
description: Chitin binding, and NodB homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5028_Chitin_binding,_and_NodB_homology_domain


id: CL:5045
description: Mixed, incl. DDE transposase retroviral integrase sub-family, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5045_Mixed,_incl._DDE_transposase_retroviral_integrase_sub-family,_and_DNA_integration


id: CL:5060
description: Mixed, incl. Mannosylation, and Glycosyltransferase 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5060_Mixed,_incl._Mannosylation,_and_Glycosyltransferase_2-like


id: CL:5061
description: Mixed, incl. Mannosylation, and Glycosyltransferase 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5061_Mixed,_incl._Mannosylation,_and_Glycosyltransferase_2-like


id: CL:5072
description: Mixed, incl. Mannosylation, and Thylakoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5072_Mixed,_incl._Mannosylation,_and_Thylakoid


id: CL:5084
description: Mixed, incl. Macromolecule modification, and DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5084_Mixed,_incl._Macromolecule_modification,_and_DNA_binding


id: CL:5085
description: Mostly uncharacterized, incl. Macromolecule modification, and Amidine-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5085_Mostly_uncharacterized,_incl._Macromolecule_modification,_and_Amidine-lyase_activity


id: CL:5086
description: Mostly uncharacterized, incl. DNA alkylation, and Proteolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5086_Mostly_uncharacterized,_incl._DNA_alkylation,_and_Proteolysis


id: CL:5087
description: Mixed, incl. DNA alkylation, and Proteolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5087_Mixed,_incl._DNA_alkylation,_and_Proteolysis


id: CL:5088
description: Mostly uncharacterized, incl. Pfam phage integrase family, and Deubiquitinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5088_Mostly_uncharacterized,_incl._Pfam_phage_integrase_family,_and_Deubiquitinase_activity


id: CL:5089
description: Mostly uncharacterized, incl. Pfam phage integrase family, and Protein of unknown function DUF6103
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5089_Mostly_uncharacterized,_incl._Pfam_phage_integrase_family,_and_Protein_of_unknown_function_DUF6103


id: CL:5090
description: Mostly uncharacterized, incl. Secretion, and SpoVG
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5090_Mostly_uncharacterized,_incl._Secretion,_and_SpoVG


id: CL:5093
description: Mostly uncharacterized, incl. Secretion, and SAF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5093_Mostly_uncharacterized,_incl._Secretion,_and_SAF_domain


id: CL:5095
description: Mostly uncharacterized, incl. SAF domain, and PKD domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5095_Mostly_uncharacterized,_incl._SAF_domain,_and_PKD_domain_superfamily


id: CL:5099
description: Mixed, incl. SAF domain, and Type II/IV secretion system protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5099_Mixed,_incl._SAF_domain,_and_Type_II/IV_secretion_system_protein


id: CL:510
description: Mixed, incl. rRNA catabolic process, and Pantothenate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:510_Mixed,_incl._rRNA_catabolic_process,_and_Pantothenate_catabolic_process


id: CL:5140
description: Mixed, incl. Protein of unknown function DUF6103, and AIG2-like family
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5140_Mixed,_incl._Protein_of_unknown_function_DUF6103,_and_AIG2-like_family


id: CL:5142
description: Mixed, incl. DNA-directed DNA polymerase activity, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5142_Mixed,_incl._DNA-directed_DNA_polymerase_activity,_and_Signal


id: CL:5157
description: Mixed, incl. AIG2-like family, and Putative amidoligase enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5157_Mixed,_incl._AIG2-like_family,_and_Putative_amidoligase_enzyme


id: CL:5174
description: Deubiquitinase activity, and DNA strand exchange activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5174_Deubiquitinase_activity,_and_DNA_strand_exchange_activity


id: CL:5183
description: DNA alkylation, and SpoVT-AbrB domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5183_DNA_alkylation,_and_SpoVT-AbrB_domain_superfamily


id: CL:5184
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5184_Adenine_modification_methylase,_M.EcoRV-type,_and_DNA_methylase,_N-4_cytosine-specific,_conserved_site

description:
  Adenine modification methylase, M.EcoRV-type, and DNA methylase, N-4 cytosine-specific, conserved site


id: CL:5193
description: SpoVT-AbrB domain superfamily, and Amidine-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5193_SpoVT-AbrB_domain_superfamily,_and_Amidine-lyase_activity


id: CL:5202
description: Mixed, incl. RmlC-like jelly roll fold, and Cellular detoxification
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5202_Mixed,_incl._RmlC-like_jelly_roll_fold,_and_Cellular_detoxification


id: CL:5204
description: Mixed, incl. Desulfoferrodoxin, and Rubredoxin-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5204_Mixed,_incl._Desulfoferrodoxin,_and_Rubredoxin-like_domain


id: CL:5205
description: Mixed, incl. Helicase/UvrB, N-terminal, and SH3-like domain, bacterial-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5205_Mixed,_incl._Helicase/UvrB,_N-terminal,_and_SH3-like_domain,_bacterial-type


id: CL:521
description: Mixed, incl. Cytidylyltransferase-like, and DNA N-glycosylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:521_Mixed,_incl._Cytidylyltransferase-like,_and_DNA_N-glycosylase_activity


id: CL:5214
description: Mixed, incl. Desulfoferrodoxin, and Rubredoxin-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5214_Mixed,_incl._Desulfoferrodoxin,_and_Rubredoxin-like_domain


id: CL:5232
description: Mixed, incl. DNA-binding recombinase domain, and Amidine-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5232_Mixed,_incl._DNA-binding_recombinase_domain,_and_Amidine-lyase_activity


id: CL:5234
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5234_Mostly_uncharacterized,_incl._DNA-binding_recombinase_domain,_and_DNA_methyase,_ParB_domain-containing

description:
  Mostly uncharacterized, incl. DNA-binding recombinase domain, and DNA methyase, ParB domain-containing


id: CL:5236
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5236_Mostly_uncharacterized,_incl._DNA_methyase,_ParB_domain-containing,_and_Peptidoglycan_muralytic_activity

description:
  Mostly uncharacterized, incl. DNA methyase, ParB domain-containing, and Peptidoglycan muralytic activity


id: CL:5239
description: Mixed, incl. Peptidoglycan muralytic activity, and Armadillo-type fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5239_Mixed,_incl._Peptidoglycan_muralytic_activity,_and_Armadillo-type_fold


id: CL:5241
description: Mixed, incl. Innate Immune System
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5241_Mixed,_incl._Innate_Immune_System


id: CL:5264
description: DNA methyase, ParB domain-containing, and Amidine-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5264_DNA_methyase,_ParB_domain-containing,_and_Amidine-lyase_activity


id: CL:5291
description: Amidine-lyase activity, and Putative amidoligase enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5291_Amidine-lyase_activity,_and_Putative_amidoligase_enzyme


id: CL:5308
description: Mixed, incl. SGNH hydrolase superfamily, and Alginate O-acetyltransferase AlgI
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5308_Mixed,_incl._SGNH_hydrolase_superfamily,_and_Alginate_O-acetyltransferase_AlgI


id: CL:5310
description: Mixed, incl. Alginate O-acetyltransferase AlgI, and SGNH hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5310_Mixed,_incl._Alginate_O-acetyltransferase_AlgI,_and_SGNH_hydrolase_superfamily


id: CL:5327
description: Mixed, incl. CAP domain, and Infection with Mycobacterium tuberculosis
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5327_Mixed,_incl._CAP_domain,_and_Infection_with_Mycobacterium_tuberculosis


id: CL:533
description: Mixed, incl. Glycolysis / Gluconeogenesis, and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:533_Mixed,_incl._Glycolysis_/_Gluconeogenesis,_and_Pentose_phosphate_pathway


id: CL:5344
description: Mixed, incl. Bacterial microcompartment, and ANTAR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5344_Mixed,_incl._Bacterial_microcompartment,_and_ANTAR_domain


id: CL:5347
description: Bacterial microcompartment, and Hsp70 protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5347_Bacterial_microcompartment,_and_Hsp70_protein


id: CL:535
description: Mixed, incl. Glycolytic process, and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:535_Mixed,_incl._Glycolytic_process,_and_Pentose_phosphate_pathway


id: CL:5350
description: Amine catabolic process, and Ethanolamine ammonia-lyase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5350_Amine_catabolic_process,_and_Ethanolamine_ammonia-lyase_complex


id: CL:5366
description: Structural constituent of carboxysome, and Hsp70 protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5366_Structural_constituent_of_carboxysome,_and_Hsp70_protein


id: CL:537
description: Glycolytic process, and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:537_Glycolytic_process,_and_Pentose_phosphate_pathway


id: CL:5391
description: Mostly uncharacterized, incl. Peptidase S1, PA clan, and YbaB/EbfC DNA-binding family
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5391_Mostly_uncharacterized,_incl._Peptidase_S1,_PA_clan,_and_YbaB/EbfC_DNA-binding_family


id: CL:5392
description: Mixed, incl. Peptidase S1, PA clan, and Acyl transferase/acyl hydrolase/lysophospholipase
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5392_Mixed,_incl._Peptidase_S1,_PA_clan,_and_Acyl_transferase/acyl_hydrolase/lysophospholipase


id: CL:5403
description: Mixed, incl. YbaB/EbfC DNA-binding family
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5403_Mixed,_incl._YbaB/EbfC_DNA-binding_family


id: CL:5413
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5413_Mixed,_incl._Transcription_regulator_PadR,_N-terminal,_and_Helix-turn-helix_XRE-family_like_proteins

description:
  Mixed, incl. Transcription regulator PadR, N-terminal, and Helix-turn-helix XRE-family like proteins


id: CL:5431
description: Mixed, incl. CDP-alcohol phosphatidyltransferase, and Periplasmic binding protein-like I
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5431_Mixed,_incl._CDP-alcohol_phosphatidyltransferase,_and_Periplasmic_binding_protein-like_I


id: CL:5440
description: Mixed, incl. PIN domain, and Ribbon-helix-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5440_Mixed,_incl._PIN_domain,_and_Ribbon-helix-helix


id: CL:5441
description: Mixed, incl. RNA ligase activity, and Asexual sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5441_Mixed,_incl._RNA_ligase_activity,_and_Asexual_sporulation


id: CL:5456
description: Mixed, incl. PIN domain, and Ribbon-helix-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5456_Mixed,_incl._PIN_domain,_and_Ribbon-helix-helix


id: CL:5489
description: DDE transposase sub-family, and IS66 Orf2 like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:5489_DDE_transposase_sub-family,_and_IS66_Orf2_like_protein


id: CL:571
description: Mixed, incl. Homing endonuclease, and Carbohydrate phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:571_Mixed,_incl._Homing_endonuclease,_and_Carbohydrate_phosphorylation


id: CL:591
description: Mixed, incl. Deoxyribonucleotide catabolic process, and glycyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:591_Mixed,_incl._Deoxyribonucleotide_catabolic_process,_and_glycyl-tRNA_aminoacylation


id: CL:592
description: Mixed, incl. Pyrimidine nucleoside metabolic process, and Deoxyribonucleotide catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:592_Mixed,_incl._Pyrimidine_nucleoside_metabolic_process,_and_Deoxyribonucleotide_catabolic_process


id: CL:594
description: Ribosome biogenesis, and Aspartyl/glutamyl-tRNA amidotransferase subunit B-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:594_Ribosome_biogenesis,_and_Aspartyl/glutamyl-tRNA_amidotransferase_subunit_B-like


id: CL:606
description: Pyrimidine nucleoside metabolic process, and Deoxyribonucleotide catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:606_Pyrimidine_nucleoside_metabolic_process,_and_Deoxyribonucleotide_catabolic_process


id: CL:616
description: glycyl-tRNA aminoacylation, and Helix-turn-helix, type 11
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:616_glycyl-tRNA_aminoacylation,_and_Helix-turn-helix,_type_11


id: CL:634
description: Mixed, incl. Rotamase, and UTP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:634_Mixed,_incl._Rotamase,_and_UTP_metabolic_process


id: CL:647
description: Biosynthesis of secondary metabolites, and Pyrimidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:647_Biosynthesis_of_secondary_metabolites,_and_Pyrimidine_metabolism


id: CL:648
description: Amino-acid biosynthesis, and Ribonucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:648_Amino-acid_biosynthesis,_and_Ribonucleoside_monophosphate_metabolic_process


id: CL:649
description: Ribonucleoside monophosphate metabolic process, and Histidine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:649_Ribonucleoside_monophosphate_metabolic_process,_and_Histidine_biosynthesis


id: CL:650
description: Ribonucleoside monophosphate metabolic process, and beta-Alanine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:650_Ribonucleoside_monophosphate_metabolic_process,_and_beta-Alanine_metabolism


id: CL:651
description: Purine nucleoside monophosphate biosynthetic process, and Uracil phosphoribosyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:651_Purine_nucleoside_monophosphate_biosynthetic_process,_and_Uracil_phosphoribosyltransferase


id: CL:654
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:654_De_novo_IMP_biosynthetic_process


id: CL:658
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:658_De_novo_IMP_biosynthetic_process


id: CL:679
description: GMP biosynthesis, and Purine salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:679_GMP_biosynthesis,_and_Purine_salvage


id: CL:690
description: De novo UMP biosynthetic process, and Dihydroorotate dehydrogenase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:690_De_novo_UMP_biosynthetic_process,_and_Dihydroorotate_dehydrogenase_domain


id: CL:692
description: De novo UMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:692_De_novo_UMP_biosynthetic_process


id: CL:713
description: Histidine biosynthesis, and glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:713_Histidine_biosynthesis,_and_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: CL:715
description: Histidine biosynthesis, and Nucleotide excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:715_Histidine_biosynthesis,_and_Nucleotide_excision_repair


id: CL:739
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:739_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: CL:748
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Lysine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:748_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Lysine_biosynthetic_process


id: CL:752
description: Phenylalanine, tyrosine and tryptophan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:752_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis


id: CL:753
description: Phenylalanine, tyrosine and tryptophan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:753_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis


id: CL:79
description: Mixed, incl. Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:79_Mixed,_incl._Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:790
description: Lysine biosynthetic process, and Arginine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:790_Lysine_biosynthetic_process,_and_Arginine_biosynthesis


id: CL:80
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:80_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:81
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:81_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:819
description: Mixed, incl. Cellular modified amino acid biosynthetic process, and Riboflavin metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:819_Mixed,_incl._Cellular_modified_amino_acid_biosynthetic_process,_and_Riboflavin_metabolism


id: CL:82
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:82_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:821
description: Folic acid-containing compound biosynthetic process, and Riboflavin metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:821_Folic_acid-containing_compound_biosynthetic_process,_and_Riboflavin_metabolism


id: CL:823
description: Folic acid-containing compound biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:823_Folic_acid-containing_compound_biosynthetic_process


id: CL:83
description: Structural constituent of ribosome, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:83_Structural_constituent_of_ribosome,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:849
description: Mixed, incl. Pyridine nucleotide biosynthetic process, and tRNA processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:849_Mixed,_incl._Pyridine_nucleotide_biosynthetic_process,_and_tRNA_processing


id: CL:85
description: Structural constituent of ribosome, and ATP synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:85_Structural_constituent_of_ribosome,_and_ATP_synthesis


id: CL:851
description: Quinolinate metabolic process, and Quinolinate phosphoribosyl transferase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:851_Quinolinate_metabolic_process,_and_Quinolinate_phosphoribosyl_transferase,_N-terminal


id: CL:86
description: Structural constituent of ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:86_Structural_constituent_of_ribosome,_and_Regulation_of_translation


id: CL:87
description: Structural constituent of ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:87_Structural_constituent_of_ribosome,_and_Regulation_of_translation


id: CL:874
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:874_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_RNA_phosphodiester_bond_hydrolysis,_exonucleolytic

description:
  Mixed, incl. tRNA threonylcarbamoyladenosine modification, and RNA phosphodiester bond hydrolysis, exonucleolytic


id: CL:876
description: Mixed, incl. NUDIX domain, and Exoribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:876_Mixed,_incl._NUDIX_domain,_and_Exoribonuclease_activity


id: CL:878
description: NUDIX domain, and Exoribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:878_NUDIX_domain,_and_Exoribonuclease_activity


id: CL:89
description: Structural constituent of ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:89_Structural_constituent_of_ribosome,_and_Translation_regulator_activity


id: CL:90
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:90_Structural_constituent_of_ribosome


id: CL:901
description: tRNA threonylcarbamoyladenosine modification, and Protein of unknown function DUF3006
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:901_tRNA_threonylcarbamoyladenosine_modification,_and_Protein_of_unknown_function_DUF3006


id: CL:915
description: Mixed, incl. Aminoacyl-tRNA synthetase, class II, and TGS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:915_Mixed,_incl._Aminoacyl-tRNA_synthetase,_class_II,_and_TGS_domain


id: CL:917
description: Mixed, incl. histidine-tRNA ligase activity, and Aminoacyl-tRNA synthetase, class II (D/K/N)
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:917_Mixed,_incl._histidine-tRNA_ligase_activity,_and_Aminoacyl-tRNA_synthetase,_class_II_(D/K/N)


id: CL:929
description: Mixed, incl. PurE domain, and PP-loop family
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:929_Mixed,_incl._PurE_domain,_and_PP-loop_family


id: CL:939
description: Mixed, incl. ParB/Spo0J, HTH domain, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:939_Mixed,_incl._ParB/Spo0J,_HTH_domain,_and_AAA_domain


id: CL:941
description: Mixed, incl. rRNA base methylation, and MnmG-related, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:941_Mixed,_incl._rRNA_base_methylation,_and_MnmG-related,_conserved_site


id: CL:963
description: Mixed, incl. Nicotinate and nicotinamide metabolism, and Carbapenem biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:963_Mixed,_incl._Nicotinate_and_nicotinamide_metabolism,_and_Carbapenem_biosynthesis


id: CL:964
description: Mixed, incl. Carbapenem biosynthesis, and NAD biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:964_Mixed,_incl._Carbapenem_biosynthesis,_and_NAD_biosynthetic_process


id: CL:968
description: Carbapenem biosynthesis, and Ribosome assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:968_Carbapenem_biosynthesis,_and_Ribosome_assembly


id: CL:990
description: NAD synthase, and NAD metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1089553_STRINGid_CL:990_NAD_synthase,_and_NAD_metabolic_process


id: GO:0000394
description: RNA splicing, via endonucleolytic cleavage and ligation
memo: https://amigo.geneontology.org/amigo/term/GO:0000394
golevel: 9
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0000394_RNA_splicing,_via_endonucleolytic_cleavage_and_ligation


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 10
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000724
description: Double-strand break repair via homologous recombination
memo: https://amigo.geneontology.org/amigo/term/GO:0000724
golevel: 9
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0000724_Double-strand_break_repair_via_homologous_recombination


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003864
description: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003864
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0003864_3-methyl-2-oxobutanoate_hydroxymethyltransferase_activity


id: GO:0003871
description: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003871
golevel: 6
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0003871_5-methyltetrahydropteroyltriglutamate-homocysteine_S-methyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 6
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0004015
description: adenosylmethionine-8-amino-7-oxononanoate transaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004015
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0004015_adenosylmethionine-8-amino-7-oxononanoate_transaminase_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
golevel: 6
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004318
description: Enoyl-[acyl-carrier-protein] reductase (NADH) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004318
golevel: 6
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0004318_Enoyl-[acyl-carrier-protein]_reductase_(NADH)_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004471
description: Malate dehydrogenase (decarboxylating) (NAD+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004471
golevel: 6
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0004471_Malate_dehydrogenase_(decarboxylating)_(NAD+)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 6
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004489
description: Methylenetetrahydrofolate reductase (NAD(P)H) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004489
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0004489_Methylenetetrahydrofolate_reductase_(NAD(P)H)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004715
description: Non-membrane spanning protein tyrosine kinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004715
golevel: 7
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0004715_Non-membrane_spanning_protein_tyrosine_kinase_activity


id: GO:0005315
description: Inorganic phosphate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005315
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0005315_Inorganic_phosphate_transmembrane_transporter_activity


id: GO:0005350
description: Pyrimidine nucleobase transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005350
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0005350_Pyrimidine_nucleobase_transmembrane_transporter_activity


id: GO:0006303
description: Double-strand break repair via nonhomologous end joining
memo: https://amigo.geneontology.org/amigo/term/GO:0006303
golevel: 9
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0006303_Double-strand_break_repair_via_nonhomologous_end_joining


id: GO:0006388
description: tRNA splicing, via endonucleolytic cleavage and ligation
memo: https://amigo.geneontology.org/amigo/term/GO:0006388
golevel: 10
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0006388_tRNA_splicing,_via_endonucleolytic_cleavage_and_ligation


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 11
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0008028
description: Monocarboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008028
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0008028_Monocarboxylic_acid_transmembrane_transporter_activity


id: GO:0008108
description: UDP-glucose:hexose-1-phosphate uridylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008108
golevel: 6
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0008108_UDP-glucose:hexose-1-phosphate_uridylyltransferase_activity


id: GO:0008271
description: Secondary active sulfate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008271
golevel: 6
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0008271_Secondary_active_sulfate_transmembrane_transporter_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 7
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008686
description: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008686
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0008686_3,4-dihydroxy-2-butanone-4-phosphate_synthase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
golevel: 6
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008817
description: cob(I)yrinic acid a,c-diamide adenosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008817
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0008817_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008939
description: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008939
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0008939_Nicotinate-nucleotide-dimethylbenzimidazole_phosphoribosyltransferase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 6
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 9
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 9
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009139
description: Pyrimidine nucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009139
golevel: 9
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0009139_Pyrimidine_nucleoside_diphosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 9
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009157
description: Deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009157
golevel: 9
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0009157_Deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 10
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 9
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 10
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009175
description: Pyrimidine ribonucleoside monophosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009175
golevel: 10
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0009175_Pyrimidine_ribonucleoside_monophosphate_catabolic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 9
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 10
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 9
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 10
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 10
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 9
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 10
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009210
description: Pyrimidine ribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009210
golevel: 10
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0009210_Pyrimidine_ribonucleoside_triphosphate_catabolic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 9
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 10
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 10
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 9
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 10
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 6
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 6
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 6
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0010604
description: Positive regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010604
golevel: 5
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0010604_Positive_regulation_of_macromolecule_metabolic_process


id: GO:0010605
description: Negative regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010605
golevel: 5
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0010605_Negative_regulation_of_macromolecule_metabolic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
golevel: 3
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015415
description: ATPase-coupled phosphate ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015415
golevel: 7
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0015415_ATPase-coupled_phosphate_ion_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015658
description: Branched-chain amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015658
golevel: 6
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0015658_Branched-chain_amino_acid_transmembrane_transporter_activity


id: GO:0015975
description: Energy derivation by oxidation of reduced inorganic compounds
memo: https://amigo.geneontology.org/amigo/term/GO:0015975
golevel: 4
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0015975_Energy_derivation_by_oxidation_of_reduced_inorganic_compounds


id: GO:0015988
description: Energy coupled proton transmembrane transport, against electrochemical gradient
memo: https://amigo.geneontology.org/amigo/term/GO:0015988
golevel: 8
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0015988_Energy_coupled_proton_transmembrane_transport,_against_electrochemical_gradient


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016624
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016624
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016624_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_disulfide_as_acceptor


id: GO:0016625
memo: https://amigo.geneontology.org/amigo/term/GO:0016625
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016625_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_iron-sulfur_protein_as_acceptor

description:
  Oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016641
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016641
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016641_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_oxygen_as_acceptor


id: GO:0016642
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016642
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016642_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_disulfide_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016652
description: Oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016652
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016652_Oxidoreductase_activity,_acting_on_NAD(P)H,_NAD(P)_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016657
description: Oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016657
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016657_Oxidoreductase_activity,_acting_on_NAD(P)H,_nitrogenous_group_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016699
description: Oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016699
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016699_Oxidoreductase_activity,_acting_on_hydrogen_as_donor,_iron-sulfur_protein_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016703
memo: https://amigo.geneontology.org/amigo/term/GO:0016703
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016703_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_one_atom_of_oxygen_(internal_monooxygenases_or_internal_mixed_function_oxidases)

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)


id: GO:0016721
description: Oxidoreductase activity, acting on superoxide radicals as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016721
golevel: 3
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016721_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016730
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016730
golevel: 3
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016730_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: GO:0016732
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors, dinitrogen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016732
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016732_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_dinitrogen_as_acceptor


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016773
description: Phosphotransferase activity, alcohol group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016773
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016773_Phosphotransferase_activity,_alcohol_group_as_acceptor


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
golevel: 6
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016856
description: Racemase and epimerase activity, acting on hydroxy acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016856
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016856_Racemase_and_epimerase_activity,_acting_on_hydroxy_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016862
description: Intramolecular oxidoreductase activity, interconverting keto- and enol-groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016862
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016862_Intramolecular_oxidoreductase_activity,_interconverting_keto-_and_enol-groups


id: GO:0016863
description: Intramolecular oxidoreductase activity, transposing C=C bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016863
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016863_Intramolecular_oxidoreductase_activity,_transposing_C=C_bonds


id: GO:0016867
description: Intramolecular transferase activity, transferring acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016867
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016867_Intramolecular_transferase_activity,_transferring_acyl_groups


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016869
description: Intramolecular transferase activity, transferring amino groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016869
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016869_Intramolecular_transferase_activity,_transferring_amino_groups


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016888
description: Endodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016888
golevel: 7
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016888_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016889
description: Endodeoxyribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016889
golevel: 7
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016889_Endodeoxyribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 7
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
golevel: 6
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016894
memo: https://amigo.geneontology.org/amigo/term/GO:0016894
golevel: 6
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016894_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_3-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 7
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016896
description: Exoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016896
golevel: 7
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016896_Exoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0017183
description: Peptidyl-diphthamide biosynthetic process from peptidyl-histidine
memo: https://amigo.geneontology.org/amigo/term/GO:0017183
golevel: 11
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0017183_Peptidyl-diphthamide_biosynthetic_process_from_peptidyl-histidine


id: GO:0018339
description: peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid
memo: https://amigo.geneontology.org/amigo/term/GO:0018339
golevel: 8
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0018339_peptidyl-L-beta-methylthioaspartic_acid_biosynthetic_process_from_peptidyl-aspartic_acid


id: GO:0019171
description: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019171
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0019171_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 5
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019243
description: Methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
memo: https://amigo.geneontology.org/amigo/term/GO:0019243
golevel: 9
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0019243_Methylglyoxal_catabolic_process_to_D-lactate_via_S-lactoyl-glutathione


id: GO:0019288
description: Isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019288
golevel: 8
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0019288_Isopentenyl_diphosphate_biosynthetic_process,_methylerythritol_4-phosphate_pathway


id: GO:0019556
description: Histidine catabolic process to glutamate and formamide
memo: https://amigo.geneontology.org/amigo/term/GO:0019556
golevel: 10
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0019556_Histidine_catabolic_process_to_glutamate_and_formamide


id: GO:0019829
description: ATPase-coupled cation transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019829
golevel: 6
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0019829_ATPase-coupled_cation_transmembrane_transporter_activity


id: GO:0030435
description: Sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0030435
golevel: 3
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0030435_Sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0030604
description: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030604
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0030604_1-deoxy-D-xylulose-5-phosphate_reductoisomerase_activity


id: GO:0030698
description: 5,10-methylenetetrahydrofolate-dependent tRNA (m5U54) methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030698
golevel: 9
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0030698_5,10-methylenetetrahydrofolate-dependent_tRNA_(m5U54)_methyltransferase_activity


id: GO:0031233
description: Intrinsic component of external side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031233
name:
  GOCC.STRING_v12.0_1089553_STRINGid_GO:0031233_Intrinsic_component_of_external_side_of_plasma_membrane


id: GO:0031234
description: Extrinsic component of cytoplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031234
golevel: 6
name:
  GOCC.STRING_v12.0_1089553_STRINGid_GO:0031234_Extrinsic_component_of_cytoplasmic_side_of_plasma_membrane


id: GO:0031250
description: Anaerobic ribonucleoside-triphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031250
golevel: 4
name:
  GOCC.STRING_v12.0_1089553_STRINGid_GO:0031250_Anaerobic_ribonucleoside-triphosphate_reductase_complex


id: GO:0031554
description: Regulation of DNA-templated transcription, termination
memo: https://amigo.geneontology.org/amigo/term/GO:0031554
golevel: 11
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0031554_Regulation_of_DNA-templated_transcription,_termination


id: GO:0032414
description: Positive regulation of ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0032414
golevel: 8
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0032414_Positive_regulation_of_ion_transmembrane_transporter_activity


id: GO:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
golevel: 3
name:
  GOCC.STRING_v12.0_1089553_STRINGid_GO:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GO:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
golevel: 3
name:
  GOCC.STRING_v12.0_1089553_STRINGid_GO:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GO:0033283
description: ATPase-coupled organic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033283
golevel: 6
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0033283_ATPase-coupled_organic_acid_transmembrane_transporter_activity


id: GO:0033284
description: ATPase-coupled carboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033284
golevel: 7
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0033284_ATPase-coupled_carboxylic_acid_transmembrane_transporter_activity


id: GO:0033362
description: Lysine biosynthetic process via diaminopimelate, diaminopimelate-aminotransferase pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0033362
golevel: 12
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0033362_Lysine_biosynthetic_process_via_diaminopimelate,_diaminopimelate-aminotransferase_pathway


id: GO:0033668
description: Negative regulation by symbiont of host apoptotic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033668
golevel: 8
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0033668_Negative_regulation_by_symbiont_of_host_apoptotic_process


id: GO:0034023
description: 5-(carboxyamino)imidazole ribonucleotide mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034023
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0034023_5-(carboxyamino)imidazole_ribonucleotide_mutase_activity


id: GO:0034036
description: Purine ribonucleoside bisphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034036
golevel: 10
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0034036_Purine_ribonucleoside_bisphosphate_biosynthetic_process


id: GO:0034249
description: Negative regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034249
golevel: 6
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0034249_Negative_regulation_of_cellular_amide_metabolic_process


id: GO:0034250
description: Positive regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034250
golevel: 6
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0034250_Positive_regulation_of_cellular_amide_metabolic_process


id: GO:0034404
description: Nucleobase-containing small molecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034404
golevel: 6
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0034404_Nucleobase-containing_small_molecule_biosynthetic_process


id: GO:0034639
description: L-amino acid efflux transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034639
golevel: 7
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0034639_L-amino_acid_efflux_transmembrane_transporter_activity


id: GO:0034656
description: Nucleobase-containing small molecule catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034656
golevel: 6
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0034656_Nucleobase-containing_small_molecule_catabolic_process


id: GO:0035592
description: Establishment of protein localization to extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0035592
golevel: 6
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0035592_Establishment_of_protein_localization_to_extracellular_region


id: GO:0035598
description: N6-threonylcarbomyladenosine methylthiotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0035598
golevel: 6
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0035598_N6-threonylcarbomyladenosine_methylthiotransferase_activity


id: GO:0035998
description: 7,8-dihydroneopterin 3-triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0035998
golevel: 6
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0035998_7,8-dihydroneopterin_3-triphosphate_biosynthetic_process


id: GO:0036361
description: Racemase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0036361
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0036361_Racemase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0036381
description: Pyridoxal 5-phosphate synthase (glutamine hydrolysing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0036381
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0036381_Pyridoxal_5-phosphate_synthase_(glutamine_hydrolysing)_activity


id: GO:0042083
description: 5,10-methylenetetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042083
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0042083_5,10-methylenetetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042084
description: 5-methyltetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042084
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0042084_5-methyltetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042085
description: 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042085
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0042085_5-methyltetrahydropteroyltri-L-glutamate-dependent_methyltransferase_activity


id: GO:0042173
description: Regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042173
golevel: 6
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0042173_Regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0042174
description: Negative regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042174
golevel: 7
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0042174_Negative_regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0042777
description: Proton motive force-driven plasma membrane ATP synthesis
memo: https://amigo.geneontology.org/amigo/term/GO:0042777
golevel: 13
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0042777_Proton_motive_force-driven_plasma_membrane_ATP_synthesis


id: GO:0043225
description: ATPase-coupled inorganic anion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043225
golevel: 6
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0043225_ATPase-coupled_inorganic_anion_transmembrane_transporter_activity


id: GO:0043242
description: Negative regulation of protein-containing complex disassembly
memo: https://amigo.geneontology.org/amigo/term/GO:0043242
golevel: 7
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0043242_Negative_regulation_of_protein-containing_complex_disassembly


id: GO:0043715
description: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043715
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0043715_2,3-diketo-5-methylthiopentyl-1-phosphate_enolase_activity


id: GO:0043772
description: Acyl-phosphate glycerol-3-phosphate acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043772
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0043772_Acyl-phosphate_glycerol-3-phosphate_acyltransferase_activity


id: GO:0043811
description: Phosphate:acyl-[acyl carrier protein] acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043811
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0043811_Phosphate:acyl-[acyl_carrier_protein]_acyltransferase_activity


id: GO:0044011
description: Single-species biofilm formation on inanimate substrate
memo: https://amigo.geneontology.org/amigo/term/GO:0044011
golevel: 7
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0044011_Single-species_biofilm_formation_on_inanimate_substrate


id: GO:0044419
description: Biological process involved in interspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0044419
golevel: 1
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0044419_Biological_process_involved_in_interspecies_interaction_between_organisms


id: GO:0044769
description: ATPase activity, coupled to transmembrane movement of ions, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0044769
golevel: 7
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0044769_ATPase_activity,_coupled_to_transmembrane_movement_of_ions,_rotational_mechanism


id: GO:0045156
memo: https://amigo.geneontology.org/amigo/term/GO:0045156
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0045156_Electron_transporter,_transferring_electrons_within_the_cyclic_electron_transport_pathway_of_photosynthesis_activity

description:
  Electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity


id: GO:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
golevel: 6
name:
  GOCC.STRING_v12.0_1089553_STRINGid_GO:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GO:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
golevel: 6
name:
  GOCC.STRING_v12.0_1089553_STRINGid_GO:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GO:0045881
description: Positive regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0045881
golevel: 7
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0045881_Positive_regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0045934
description: Negative regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045934
golevel: 6
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0045934_Negative_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0045935
description: Positive regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045935
golevel: 6
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0045935_Positive_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0046429
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046429
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0046429_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_synthase_activity


id: GO:0046537
description: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046537
golevel: 6
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0046537_2,3-bisphosphoglycerate-independent_phosphoglycerate_mutase_activity


id: GO:0046857
memo: https://amigo.geneontology.org/amigo/term/GO:0046857
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0046857_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors,_with_NAD_or_NADP_as_acceptor

description:
  Oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor


id: GO:0046912
description: Acyltransferase activity, acyl groups converted into alkyl on transfer
memo: https://amigo.geneontology.org/amigo/term/GO:0046912
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0046912_Acyltransferase_activity,_acyl_groups_converted_into_alkyl_on_transfer


id: GO:0046915
description: Transition metal ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046915
golevel: 6
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0046915_Transition_metal_ion_transmembrane_transporter_activity


id: GO:0046933
description: Proton-transporting ATP synthase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046933
golevel: 8
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0046933_Proton-transporting_ATP_synthase_activity,_rotational_mechanism


id: GO:0046961
description: Proton-transporting ATPase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046961
golevel: 8
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0046961_Proton-transporting_ATPase_activity,_rotational_mechanism


id: GO:0046992
description: Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond
memo: https://amigo.geneontology.org/amigo/term/GO:0046992
golevel: 3
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0046992_Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond


id: GO:0047151
description: methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase (FADH2-oxidizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047151
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0047151_methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase_(FADH2-oxidizing)_activity


id: GO:0047451
description: 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047451
golevel: 6
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0047451_3-hydroxyoctanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0048646
description: Anatomical structure formation involved in morphogenesis
memo: https://amigo.geneontology.org/amigo/term/GO:0048646
golevel: 2
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0048646_Anatomical_structure_formation_involved_in_morphogenesis


id: GO:0050511
description: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050511
golevel: 6
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0050511_Undecaprenyldiphospho-muramoylpentapeptide_beta-N-acetylglucosaminyltransferase_activity


id: GO:0050515
description: 4-(cytidine 5-diphospho)-2-C-methyl-D-erythritol kinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050515
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0050515_4-(cytidine_5-diphospho)-2-C-methyl-D-erythritol_kinase_activity


id: GO:0050518
description: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050518
golevel: 6
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0050518_2-C-methyl-D-erythritol_4-phosphate_cytidylyltransferase_activity


id: GO:0050566
description: asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050566
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0050566_asparaginyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0050567
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050567
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0050567_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0051003
description: Ligase activity, forming nitrogen-metal bonds, forming coordination complexes
memo: https://amigo.geneontology.org/amigo/term/GO:0051003
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0051003_Ligase_activity,_forming_nitrogen-metal_bonds,_forming_coordination_complexes


id: GO:0051075
description: S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051075
golevel: 3
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0051075_S-adenosylmethionine:tRNA_ribosyltransferase-isomerase_activity


id: GO:0051129
description: Negative regulation of cellular component organization
memo: https://amigo.geneontology.org/amigo/term/GO:0051129
golevel: 5
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0051129_Negative_regulation_of_cellular_component_organization


id: GO:0051172
description: Negative regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051172
golevel: 5
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0051172_Negative_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051173
description: Positive regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051173
golevel: 5
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0051173_Positive_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051240
description: Positive regulation of multicellular organismal process
memo: https://amigo.geneontology.org/amigo/term/GO:0051240
golevel: 4
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0051240_Positive_regulation_of_multicellular_organismal_process


id: GO:0051703
description: Biological process involved in intraspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0051703
golevel: 1
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0051703_Biological_process_involved_in_intraspecies_interaction_between_organisms


id: GO:0051745
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051745
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0051745_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_reductase_activity


id: GO:0051748
description: UTP-monosaccharide-1-phosphate uridylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051748
golevel: 6
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0051748_UTP-monosaccharide-1-phosphate_uridylyltransferase_activity


id: GO:0051991
memo: https://amigo.geneontology.org/amigo/term/GO:0051991
golevel: 6
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0051991_UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol_4-beta-N-acetylglucosaminlytransferase_activity

description:
  UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity


id: GO:0051992
memo: https://amigo.geneontology.org/amigo/term/GO:0051992
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0051992_UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate_transferase_activity

description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity


id: GO:0052041
description: Negative regulation by symbiont of host programmed cell death
memo: https://amigo.geneontology.org/amigo/term/GO:0052041
golevel: 7
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0052041_Negative_regulation_by_symbiont_of_host_programmed_cell_death


id: GO:0052592
description: Oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0052592
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0052592_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_with_an_iron-sulfur_protein_as_acceptor


id: GO:0052890
description: Oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0052890
golevel: 4
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0052890_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_with_a_flavin_as_acceptor


id: GO:0052908
description: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052908
golevel: 9
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0052908_16S_rRNA_(adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase_activity


id: GO:0055086
description: Nucleobase-containing small molecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0055086
golevel: 3
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0055086_Nucleobase-containing_small_molecule_metabolic_process


id: GO:0060567
description: Negative regulation of DNA-templated transcription, termination
memo: https://amigo.geneontology.org/amigo/term/GO:0060567
golevel: 12
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0060567_Negative_regulation_of_DNA-templated_transcription,_termination


id: GO:0061504
description: Cyclic threonylcarbamoyladenosine biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0061504
golevel: 11
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0061504_Cyclic_threonylcarbamoyladenosine_biosynthetic_process


id: GO:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
golevel: 4
name:
  GOCC.STRING_v12.0_1089553_STRINGid_GO:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GO:0070647
description: Protein modification by small protein conjugation or removal
memo: https://amigo.geneontology.org/amigo/term/GO:0070647
golevel: 6
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0070647_Protein_modification_by_small_protein_conjugation_or_removal


id: GO:0071575
description: Integral component of external side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0071575
name:
  GOCC.STRING_v12.0_1089553_STRINGid_GO:0071575_Integral_component_of_external_side_of_plasma_membrane


id: GO:0071951
description: Conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
memo: https://amigo.geneontology.org/amigo/term/GO:0071951
golevel: 12
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0071951_Conversion_of_methionyl-tRNA_to_N-formyl-methionyl-tRNA


id: GO:0072531
description: Pyrimidine-containing compound transmembrane transport
memo: https://amigo.geneontology.org/amigo/term/GO:0072531
golevel: 5
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0072531_Pyrimidine-containing_compound_transmembrane_transport


id: GO:0072599
description: Establishment of protein localization to endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0072599
golevel: 7
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0072599_Establishment_of_protein_localization_to_endoplasmic_reticulum


id: GO:0097588
description: Archaeal or bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:0097588
golevel: 4
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0097588_Archaeal_or_bacterial-type_flagellum-dependent_cell_motility


id: GO:0102752
memo: https://amigo.geneontology.org/amigo/term/GO:0102752
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0102752_1,4-alpha-glucan_branching_enzyme_activity_(using_a_glucosylated_glycogenin_as_primer_for_glycogen_synthesis)

description:
  1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis)


id: GO:0106074
description: aminoacyl-tRNA metabolism involved in translational fidelity
memo: https://amigo.geneontology.org/amigo/term/GO:0106074
golevel: 9
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:0106074_aminoacyl-tRNA_metabolism_involved_in_translational_fidelity


id: GO:0140078
description: Class I DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0140078
golevel: 5
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:0140078_Class_I_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:1901381
description: Positive regulation of potassium ion transmembrane transport
memo: https://amigo.geneontology.org/amigo/term/GO:1901381
golevel: 10
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:1901381_Positive_regulation_of_potassium_ion_transmembrane_transport


id: GO:1901505
description: Carbohydrate derivative transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901505
golevel: 3
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:1901505_Carbohydrate_derivative_transmembrane_transporter_activity


id: GO:1901618
description: Organic hydroxy compound transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901618
golevel: 3
name:
  GOMF.STRING_v12.0_1089553_STRINGid_GO:1901618_Organic_hydroxy_compound_transmembrane_transporter_activity


id: GO:1901800
description: Positive regulation of proteasomal protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1901800
golevel: 9
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:1901800_Positive_regulation_of_proteasomal_protein_catabolic_process


id: GO:1902021
description: Regulation of bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:1902021
golevel: 6
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:1902021_Regulation_of_bacterial-type_flagellum-dependent_cell_motility


id: GO:1902221
description: Erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1902221
golevel: 8
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:1902221_Erythrose_4-phosphate/phosphoenolpyruvate_family_amino_acid_metabolic_process


id: GO:1902223
description: Erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:1902223
golevel: 9
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:1902223_Erythrose_4-phosphate/phosphoenolpyruvate_family_amino_acid_biosynthetic_process


id: GO:1903050
description: Regulation of proteolysis involved in protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1903050
golevel: 7
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:1903050_Regulation_of_proteolysis_involved_in_protein_catabolic_process


id: GO:1903052
description: Positive regulation of proteolysis involved in protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1903052
golevel: 8
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:1903052_Positive_regulation_of_proteolysis_involved_in_protein_catabolic_process


id: GO:1903507
description: Negative regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903507
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:1903507_Negative_regulation_of_nucleic_acid-templated_transcription


id: GO:1903508
description: Positive regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903508
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:1903508_Positive_regulation_of_nucleic_acid-templated_transcription


id: GO:1990961
description: Xenobiotic detoxification by transmembrane export across the plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:1990961
golevel: 6
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:1990961_Xenobiotic_detoxification_by_transmembrane_export_across_the_plasma_membrane


id: GO:2000112
description: Regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000112
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:2000112_Regulation_of_cellular_macromolecule_biosynthetic_process


id: GO:2000113
description: Negative regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000113
name:
  GOBP.STRING_v12.0_1089553_STRINGid_GO:2000113_Negative_regulation_of_cellular_macromolecule_biosynthetic_process


id: GOCC:0000015
description: Phosphopyruvate hydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000015
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0000015_Phosphopyruvate_hydratase_complex


id: GOCC:0000159
description: Protein phosphatase type 2A complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000159
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0000159_Protein_phosphatase_type_2A_complex


id: GOCC:0000172
description: Ribonuclease MRP complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000172
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0000172_Ribonuclease_MRP_complex


id: GOCC:0000178
description: Exosome (RNase complex)
memo: https://amigo.geneontology.org/amigo/term/GO:0000178
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0000178_Exosome_(RNase_complex)


id: GOCC:0000228
description: Nuclear chromosome
memo: https://amigo.geneontology.org/amigo/term/GO:0000228
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0000228_Nuclear_chromosome


id: GOCC:0000313
description: Organellar ribosome
memo: https://amigo.geneontology.org/amigo/term/GO:0000313
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0000313_Organellar_ribosome


id: GOCC:0000314
description: Organellar small ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0000314
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0000314_Organellar_small_ribosomal_subunit


id: GOCC:0000325
description: Plant-type vacuole
memo: https://amigo.geneontology.org/amigo/term/GO:0000325
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0000325_Plant-type_vacuole


id: GOCC:0000408
description: EKC/KEOPS complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000408
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0000408_EKC/KEOPS_complex


id: GOCC:0000428
description: DNA-directed RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000428
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0000428_DNA-directed_RNA_polymerase_complex


id: GOCC:0000502
description: Proteasome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000502
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0000502_Proteasome_complex


id: GOCC:0000781
description: Chromosome, telomeric region
memo: https://amigo.geneontology.org/amigo/term/GO:0000781
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0000781_Chromosome,_telomeric_region


id: GOCC:0000793
description: Condensed chromosome
memo: https://amigo.geneontology.org/amigo/term/GO:0000793
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0000793_Condensed_chromosome


id: GOCC:0000930
description: Gamma-tubulin complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000930
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0000930_Gamma-tubulin_complex


id: GOCC:0000931
description: Gamma-tubulin large complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000931
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0000931_Gamma-tubulin_large_complex


id: GOCC:0002189
description: Ribose phosphate diphosphokinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0002189
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0002189_Ribose_phosphate_diphosphokinase_complex


id: GOCC:0005576
description: Extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0005576
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0005576_Extracellular_region


id: GOCC:0005615
description: Extracellular space
memo: https://amigo.geneontology.org/amigo/term/GO:0005615
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0005615_Extracellular_space


id: GOCC:0005727
description: Extrachromosomal circular DNA
memo: https://amigo.geneontology.org/amigo/term/GO:0005727
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0005727_Extrachromosomal_circular_DNA


id: GOCC:0005732
description: Small nucleolar ribonucleoprotein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005732
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0005732_Small_nucleolar_ribonucleoprotein_complex


id: GOCC:0005740
description: Mitochondrial envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0005740
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0005740_Mitochondrial_envelope


id: GOCC:0005743
description: Mitochondrial inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005743
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0005743_Mitochondrial_inner_membrane


id: GOCC:0005746
description: Mitochondrial respirasome
memo: https://amigo.geneontology.org/amigo/term/GO:0005746
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0005746_Mitochondrial_respirasome


id: GOCC:0005747
description: Mitochondrial respiratory chain complex I
memo: https://amigo.geneontology.org/amigo/term/GO:0005747
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0005747_Mitochondrial_respiratory_chain_complex_I


id: GOCC:0005759
description: Mitochondrial matrix
memo: https://amigo.geneontology.org/amigo/term/GO:0005759
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0005759_Mitochondrial_matrix


id: GOCC:0005783
description: Endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0005783
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0005783_Endoplasmic_reticulum


id: GOCC:0005788
description: Endoplasmic reticulum lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0005788
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0005788_Endoplasmic_reticulum_lumen


id: GOCC:0005789
description: Endoplasmic reticulum membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005789
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0005789_Endoplasmic_reticulum_membrane


id: GOCC:0005798
description: Golgi-associated vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0005798
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0005798_Golgi-associated_vesicle


id: GOCC:0005815
description: Microtubule organizing center
memo: https://amigo.geneontology.org/amigo/term/GO:0005815
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0005815_Microtubule_organizing_center


id: GOCC:0005835
description: Fatty acid synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005835
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0005835_Fatty_acid_synthase_complex


id: GOCC:0005839
description: Proteasome core complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005839
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0005839_Proteasome_core_complex


id: GOCC:0005854
description: Nascent polypeptide-associated complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005854
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0005854_Nascent_polypeptide-associated_complex


id: GOCC:0005882
description: Intermediate filament
memo: https://amigo.geneontology.org/amigo/term/GO:0005882
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0005882_Intermediate_filament


id: GOCC:0005887
description: Integral component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005887
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0005887_Integral_component_of_plasma_membrane


id: GOCC:0005911
description: Cell-cell junction
memo: https://amigo.geneontology.org/amigo/term/GO:0005911
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0005911_Cell-cell_junction


id: GOCC:0005945
description: 6-phosphofructokinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005945
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0005945_6-phosphofructokinase_complex


id: GOCC:0005948
description: Acetolactate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005948
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0005948_Acetolactate_synthase_complex


id: GOCC:0005951
description: Carbamoyl-phosphate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005951
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0005951_Carbamoyl-phosphate_synthase_complex


id: GOCC:0005960
description: Glycine cleavage complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005960
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0005960_Glycine_cleavage_complex


id: GOCC:0005963
description: Magnesium-dependent protein serine/threonine phosphatase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005963
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0005963_Magnesium-dependent_protein_serine/threonine_phosphatase_complex


id: GOCC:0008076
description: Voltage-gated potassium channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0008076
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0008076_Voltage-gated_potassium_channel_complex


id: GOCC:0008287
description: Protein serine/threonine phosphatase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0008287
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0008287_Protein_serine/threonine_phosphatase_complex


id: GOCC:0009279
description: Cell outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009279
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0009279_Cell_outer_membrane


id: GOCC:0009288
description: Bacterial-type flagellum
memo: https://amigo.geneontology.org/amigo/term/GO:0009288
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0009288_Bacterial-type_flagellum


id: GOCC:0009316
description: 3-isopropylmalate dehydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009316
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0009316_3-isopropylmalate_dehydratase_complex


id: GOCC:0009317
description: acetyl-CoA carboxylase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009317
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0009317_acetyl-CoA_carboxylase_complex


id: GOCC:0009318
description: Exodeoxyribonuclease VII complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009318
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0009318_Exodeoxyribonuclease_VII_complex


id: GOCC:0009326
description: Formate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009326
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0009326_Formate_dehydrogenase_complex


id: GOCC:0009331
description: glycerol-3-phosphate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009331
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0009331_glycerol-3-phosphate_dehydrogenase_complex


id: GOCC:0009337
description: Sulfite reductase complex (NADPH)
memo: https://amigo.geneontology.org/amigo/term/GO:0009337
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0009337_Sulfite_reductase_complex_(NADPH)


id: GOCC:0009339
description: Glycolate oxidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009339
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0009339_Glycolate_oxidase_complex


id: GOCC:0009341
description: Beta-galactosidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009341
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0009341_Beta-galactosidase_complex


id: GOCC:0009345
description: glycine-tRNA ligase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009345
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0009345_glycine-tRNA_ligase_complex


id: GOCC:0009347
description: Aspartate carbamoyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009347
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0009347_Aspartate_carbamoyltransferase_complex


id: GOCC:0009349
description: Riboflavin synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009349
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0009349_Riboflavin_synthase_complex


id: GOCC:0009350
description: Ethanolamine ammonia-lyase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009350
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0009350_Ethanolamine_ammonia-lyase_complex


id: GOCC:0009360
description: DNA polymerase III complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009360
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0009360_DNA_polymerase_III_complex


id: GOCC:0009368
description: Endopeptidase Clp complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009368
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0009368_Endopeptidase_Clp_complex


id: GOCC:0009375
description: Ferredoxin hydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009375
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0009375_Ferredoxin_hydrogenase_complex


id: GOCC:0009376
description: HslUV protease complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009376
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0009376_HslUV_protease_complex


id: GOCC:0009379
description: Holliday junction helicase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009379
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0009379_Holliday_junction_helicase_complex


id: GOCC:0009380
description: Excinuclease repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009380
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0009380_Excinuclease_repair_complex


id: GOCC:0009420
description: Bacterial-type flagellum filament
memo: https://amigo.geneontology.org/amigo/term/GO:0009420
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0009420_Bacterial-type_flagellum_filament


id: GOCC:0009421
description: Bacterial-type flagellum filament cap
memo: https://amigo.geneontology.org/amigo/term/GO:0009421
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0009421_Bacterial-type_flagellum_filament_cap


id: GOCC:0009424
description: Bacterial-type flagellum hook
memo: https://amigo.geneontology.org/amigo/term/GO:0009424
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0009424_Bacterial-type_flagellum_hook


id: GOCC:0009425
description: Bacterial-type flagellum basal body
memo: https://amigo.geneontology.org/amigo/term/GO:0009425
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0009425_Bacterial-type_flagellum_basal_body


id: GOCC:0009426
description: Bacterial-type flagellum basal body, distal rod
memo: https://amigo.geneontology.org/amigo/term/GO:0009426
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0009426_Bacterial-type_flagellum_basal_body,_distal_rod


id: GOCC:0009431
description: Bacterial-type flagellum basal body, MS ring
memo: https://amigo.geneontology.org/amigo/term/GO:0009431
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0009431_Bacterial-type_flagellum_basal_body,_MS_ring


id: GOCC:0009505
description: Plant-type cell wall
memo: https://amigo.geneontology.org/amigo/term/GO:0009505
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1089553_STRINGid_GOCC:0009505_Plant-type_cell_wall


