# geneInfo

ensembl_gene_id: JWYL7_0001
symbol: JWYL7_0001
gene_biotype: protein_coding
description:
  PFAM: Type II secretion system F domain-containing protein; KEGG: type II secretion system F domain-containing protein.


ensembl_gene_id: JWYL7_0003
symbol: JWYL7_0003
gene_biotype: protein_coding
description:
  KEGG: twitching motility protein; SMART: AAA ATPase; TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E.


ensembl_gene_id: JWYL7_0004
symbol: JWYL7_0004
gene_biotype: protein_coding
description:
  SMART: AAA ATPase; KEGG: type II secretion system protein E; PFAM: type II secretion system protein E, General secretory system II protein E domain protein.


ensembl_gene_id: JWYL7_0005
symbol: pepA
gene_biotype: protein_coding
description:
  Cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: JWYL7_0009
symbol: rplY
gene_biotype: protein_coding
description:
  50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: JWYL7_0013
symbol: hisC
gene_biotype: protein_coding
description:
  PFAM: aminotransferase class I and II; HAMAP : Histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; KEGG: histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: JWYL7_0014
symbol: JWYL7_0014
gene_biotype: protein_coding
description:
  Small GTP-binding protein; PFAM: elongation factor G domain IV, protein synthesis factor GTP-binding protein, elongation factor Tu domain 2 protein, elongation factor G domain-containing protein; TIGRFAM: small GTP-binding protein; SMART: elongation factor G domain IV, elongation factor G domain-containing protein; KEGG: translation elongation factor g.


ensembl_gene_id: JWYL7_0015
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: JWYL7_0016
symbol: disA
gene_biotype: protein_coding
description:
  DNA integrity scanning protein disA; Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation; upon encountering a lesion, the DisA focus arrests at the damaged site and halts c-di-AMP synthesis.


ensembl_gene_id: JWYL7_0018
symbol: JWYL7_0018
gene_biotype: protein_coding
description:
  PFAM: transcription factor CarD; KEGG: CarD family transcriptional regulator; SMART: transcription factor CarD.


ensembl_gene_id: JWYL7_0019
symbol: JWYL7_0019
gene_biotype: protein_coding
description:
  SMART: Nucleotide binding protein PINc; PFAM: PilT protein domain protein, deoxyribonuclease/rho motif-related TRAM; KEGG: PilT domain-containing protein.


ensembl_gene_id: JWYL7_0020
symbol: JWYL7_0020
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein; KEGG: helix-turn-helix domain-containing protein.


ensembl_gene_id: JWYL7_0023
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: JWYL7_0024
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: JWYL7_0025
symbol: proS
gene_biotype: protein_coding
description:
  Prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).


ensembl_gene_id: JWYL7_0026
symbol: JWYL7_0026
gene_biotype: protein_coding
description:
  PFAM: YbaK/prolyl-tRNA synthetase associated region, Anticodon-binding domain protein; KEGG: prolyl-tRNA synthetase.


ensembl_gene_id: JWYL7_0027
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: JWYL7_0028
symbol: JWYL7_0028
gene_biotype: protein_coding
description:
  Cysteine synthase A; KEGG: putative O-acetylserine (thiol)-lyase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; TIGRFAM: cysteine synthase A, cysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family.


ensembl_gene_id: JWYL7_0030
symbol: JWYL7_0030
gene_biotype: protein_coding
description:
  KEGG: cysE, serine acetyltransferase; PFAM: transferase hexapeptide repeat containing protein; TIGRFAM: serine O-acetyltransferase.


ensembl_gene_id: JWYL7_0031
symbol: cysS
gene_biotype: protein_coding
description:
  KEGG: cysS, cysteinyl-tRNA synthetase; HAMAP : Cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase/mycothiol ligase, Cysteinyl-tRNA synthetase class Ia DALR; SMART: Cysteinyl-tRNA synthetase class Ia DALR; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: JWYL7_0032
symbol: mrnC
gene_biotype: protein_coding
description:
  Putative conserved protein UCP005520; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.


ensembl_gene_id: JWYL7_0033
symbol: thyX
gene_biotype: protein_coding
description:
  Thymidylate synthase thyX; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: JWYL7_0034
symbol: JWYL7_0034
gene_biotype: protein_coding
description:
  TIGRFAM: transposase, IS605 OrfB family; KEGG: transposase; PFAM: transposase IS605 OrfB, Transposase, helix-turn-helix domain-containing protein.


ensembl_gene_id: JWYL7_0035
symbol: JWYL7_0035
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU), RNA 2-O ribose methyltransferase substrate binding protein; SMART: RNA 2-O ribose methyltransferase substrate binding protein; TIGRFAM: RNA methyltransferase, TrmH family, group 3; KEGG: tRNA/rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: JWYL7_0037
symbol: JWYL7_0037
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, SigH, ECF subfamily; PFAM: sigma-70 region 2 domain protein, Sigma-70 region 4 type 2; TIGRFAM: RNA polymerase sigma-H factor, RNA polymerase sigma factor, sigma-70 family; SMART: regulatory protein LuxR; KEGG: sigH, RNA polymerase factor sigma-70.


ensembl_gene_id: JWYL7_0038
symbol: tuf
gene_biotype: protein_coding
description:
  tufB, protein chain elongation factor ef-tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: JWYL7_0039
symbol: rpmG
gene_biotype: protein_coding
description:
  KEGG: rpmGA, 50S ribosomal protein L33; PFAM: ribosomal protein L33; TIGRFAM: ribosomal protein L33; HAMAP : 50S ribosomal protein L33; Belongs to the bacterial ribosomal protein bL33 family.


ensembl_gene_id: JWYL7_0040
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: JWYL7_0041
symbol: nusG
gene_biotype: protein_coding
description:
  NusG antitermination factor; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: JWYL7_0042
symbol: rplK
gene_biotype: protein_coding
description:
  Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: JWYL7_0043
symbol: rplA
gene_biotype: protein_coding
description:
  Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: JWYL7_0044
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: JWYL7_0045
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: JWYL7_0046
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: JWYL7_0049
symbol: rpsL
gene_biotype: protein_coding
description:
  Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: JWYL7_0050
symbol: rpsG
gene_biotype: protein_coding
description:
  Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: JWYL7_0051
symbol: fusA
gene_biotype: protein_coding
description:
  Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]


ensembl_gene_id: JWYL7_0053
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: JWYL7_0054
symbol: rplC
gene_biotype: protein_coding
description:
  Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: JWYL7_0056
symbol: rplW
gene_biotype: protein_coding
description:
  Ribosomal protein L25/L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: JWYL7_0057
symbol: rplB
gene_biotype: protein_coding
description:
  Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: JWYL7_0058
symbol: rpsS
gene_biotype: protein_coding
description:
  Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: JWYL7_0059
symbol: rplV
gene_biotype: protein_coding
description:
  Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: JWYL7_0060
symbol: rpsC
gene_biotype: protein_coding
description:
  Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: JWYL7_0061
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: JWYL7_0062
symbol: rpmC
gene_biotype: protein_coding
description:
  KEGG: 50S ribosomal protein L29; PFAM: ribosomal protein L29; TIGRFAM: ribosomal protein L29; HAMAP : 50S ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family.


ensembl_gene_id: JWYL7_0063
symbol: rpsQ
gene_biotype: protein_coding
description:
  Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: JWYL7_0064
symbol: rplN
gene_biotype: protein_coding
description:
  Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: JWYL7_0065
symbol: rplX
gene_biotype: protein_coding
description:
  Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: JWYL7_0066
symbol: rplE
gene_biotype: protein_coding
description:
  Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: JWYL7_0067
symbol: rpsZ
gene_biotype: protein_coding
description:
  Ribosomal protein S14, type Z; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: JWYL7_0068
symbol: rpsH
gene_biotype: protein_coding
description:
  Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: JWYL7_0069
symbol: rplF
gene_biotype: protein_coding
description:
  Ribosomal protein L6, subgroup; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: JWYL7_0070
symbol: rplR
gene_biotype: protein_coding
description:
  Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: JWYL7_0071
symbol: rpsE
gene_biotype: protein_coding
description:
  Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: JWYL7_0072
symbol: rpmD
gene_biotype: protein_coding
description:
  HAMAP : ribosomal protein L30; PFAM: Ribosomal protein L30, ferredoxin-like fold domain-containing protein; TIGRFAM: ribosomal protein L30; KEGG: rpmD, 50S ribosomal protein L30.


ensembl_gene_id: JWYL7_0073
symbol: rplO
gene_biotype: protein_coding
description:
  Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: JWYL7_0074
symbol: secY
gene_biotype: protein_coding
description:
  Protein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: JWYL7_0075
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: JWYL7_0076
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: JWYL7_0078
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: JWYL7_0079
symbol: rpmJ
gene_biotype: protein_coding
description:
  HAMAP : 50S ribosomal protein L36; PFAM: ribosomal protein L36; TIGRFAM: ribosomal protein L36; KEGG: 50S ribosomal protein L36; Belongs to the bacterial ribosomal protein bL36 family.


ensembl_gene_id: JWYL7_0080
symbol: rpsM
gene_biotype: protein_coding
description:
  Ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: JWYL7_0081
symbol: rpsK
gene_biotype: protein_coding
description:
  Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: JWYL7_0082
symbol: rpsD
gene_biotype: protein_coding
description:
  Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: JWYL7_0083
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: JWYL7_0084
symbol: rplQ
gene_biotype: protein_coding
description:
  HAMAP : 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: rplQ, 50S ribosomal protein L17.


ensembl_gene_id: JWYL7_0085
symbol: ecfA
gene_biotype: protein_coding
description:
  Phosphonate-transporting ATPase; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: JWYL7_0086
symbol: ecfA-2
gene_biotype: protein_coding
description:
  Cobalt ABC transporter, ATPase subunit; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: JWYL7_0087
symbol: ecfT
gene_biotype: protein_coding
description:
  ECF transporter transmembrane protein EcfT; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: JWYL7_0088
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: JWYL7_0089
symbol: rplM
gene_biotype: protein_coding
description:
  Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: JWYL7_0090
symbol: rpsI
gene_biotype: protein_coding
description:
  KEGG: 30S ribosomal protein S9; HAMAP : Ribosomal protein S9, bacterial/plastid; PFAM: ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.


ensembl_gene_id: JWYL7_0091
symbol: JWYL7_0091
gene_biotype: protein_coding
description:
  KEGG: cwlD, Germination-specific N-acetylmuramoyl-L-alanine amidase, Autolysin; TIGRFAM: N-acetylmuramoyl-L-alanine amidase CwlD; SMART: cell wall hydrolase/autolysin; PFAM: cell wall hydrolase/autolysin.


ensembl_gene_id: JWYL7_0092
symbol: JWYL7_0092
gene_biotype: protein_coding
description:
  TIGRFAM: nucleoside transporter; KEGG: NupC family nucleoside transporter; PFAM: Na+ dependent nucleoside transporter domain protein, nucleoside recognition domain protein, Na+ dependent nucleoside transporter; Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family.


ensembl_gene_id: JWYL7_0095
symbol: dacA
gene_biotype: protein_coding
description:
  Conserved hypothetical protein CHP00159; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: JWYL7_0097
symbol: buk
gene_biotype: protein_coding
description:
  PFAM: acetate and butyrate kinase; TIGRFAM: butyrate kinase; KEGG: butyrate kinase; HAMAP : butyrate kinase; Belongs to the acetokinase family.


ensembl_gene_id: JWYL7_0098
symbol: JWYL7_0098
gene_biotype: protein_coding
description:
  TIGRFAM: phosphate butyryltransferase; PFAM: phosphate acetyl/butaryl transferase; KEGG: phosphate butyryltransferase.


ensembl_gene_id: JWYL7_0099
symbol: buk-2
gene_biotype: protein_coding
description:
  PFAM: acetate and butyrate kinase; HAMAP : butyrate kinase; TIGRFAM: butyrate kinase; KEGG: butyrate kinase; Belongs to the acetokinase family.


ensembl_gene_id: JWYL7_0101
symbol: JWYL7_0101
gene_biotype: protein_coding
description:
  PFAM: 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein; KEGG: 4fe-4S ferredoxin, iron-sulfur binding domain-containing protein.


ensembl_gene_id: JWYL7_0102
symbol: JWYL7_0102
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate dehydrogenase (ferredoxin); PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein, Transketolase domain-containing protein; KEGG: 2-ketoisovalerate ferredoxin reductase.


ensembl_gene_id: JWYL7_0103
symbol: JWYL7_0103
gene_biotype: protein_coding
description:
  2-oxoglutarate synthase; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; KEGG: subunit of oxidoreductase.


ensembl_gene_id: JWYL7_0104
symbol: JWYL7_0104
gene_biotype: protein_coding
description:
  Pyruvate/ketoisovalerate oxidoreductase, gamma subunit; PFAM: Pyruvate/ketoisovalerate oxidoreductase; KEGG: pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: pyruvate/ketoisovalerate oxidoreductase, gamma subunit.


ensembl_gene_id: JWYL7_0105
symbol: JWYL7_0105
gene_biotype: protein_coding
description:
  PFAM: transposase IS605 OrfB, Transposase, helix-turn-helix domain-containing protein; KEGG: transposase; TIGRFAM: transposase, IS605 OrfB family.


ensembl_gene_id: JWYL7_0106
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: JWYL7_0107
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: JWYL7_0111
symbol: JWYL7_0111
gene_biotype: protein_coding
description:
  SMART: regulatory protein GntR HTH; KEGG: GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH.


ensembl_gene_id: JWYL7_0115
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: JWYL7_0116
symbol: JWYL7_0116
gene_biotype: protein_coding
description:
  TIGRFAM: stage II sporulation protein D, SpoIID/LytB domain protein; KEGG: sporulation stage II protein D; PFAM: Stage II sporulation protein D.


ensembl_gene_id: JWYL7_0118
symbol: JWYL7_0118
gene_biotype: protein_coding
description:
  PFAM: Sporulation stage III transcriptional regulator SpoIIID; KEGG: stage III sporulation protein D; TIGRFAM: sporulation transcriptional regulator SpoIIID.


ensembl_gene_id: JWYL7_0119
symbol: JWYL7_0119
gene_biotype: protein_coding
description:
  TIGRFAM: cell shape determining protein, MreB/Mrl family; KEGG: mreB, cell wall structural complex mrebcd, actin-like component mreb; PFAM: cell shape determining protein MreB/Mrl.


ensembl_gene_id: JWYL7_0120
symbol: JWYL7_0120
gene_biotype: protein_coding
description:
  Flagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein, flagellar basal body rod protein; TIGRFAM: flagellar hook-basal body protein; KEGG: flagellar basal body rod protein.


ensembl_gene_id: JWYL7_0121
symbol: JWYL7_0121
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgG; PFAM: protein of unknown function DUF1078 domain protein, flagellar basal body rod protein; KEGG: hypothetical protein; TIGRFAM: flagellar basal-body rod protein FlgG, flagellar hook-basal body protein, flagellar basal-body rod protein FlgF.


ensembl_gene_id: JWYL7_0123
symbol: fabZ
gene_biotype: protein_coding
description:
  (3R)-hydroxymyristoyl-(acyl-carrier-protein) dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: JWYL7_0124
symbol: JWYL7_0124
gene_biotype: protein_coding
description:
  PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II, phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III, phosphoglucomutase/phosphomannomutase; KEGG: pgm, phosphoglucomutase.


ensembl_gene_id: JWYL7_0126
symbol: JWYL7_0126
gene_biotype: protein_coding
description:
  Sporulation protein YyaC; PFAM: protein of unknown function DUF1256; KEGG: hypothetical protein; TIGRFAM: sporulation protein YyaC.


ensembl_gene_id: JWYL7_0128
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: JWYL7_0129
symbol: recD2
gene_biotype: protein_coding
description:
  Helicase, RecD/TraA family; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.


ensembl_gene_id: JWYL7_0132
symbol: JWYL7_0132
gene_biotype: protein_coding
description:
  PFAM: Anti-sigma-28 factor FlgM family protein; KEGG: anti-sigma-28 factor, FlgM family protein; TIGRFAM: flagellar biosynthesis anti-sigma factor protein FlgM.


ensembl_gene_id: JWYL7_0134
symbol: flgK
gene_biotype: protein_coding
description:
  KEGG: flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein, flagellar basal body rod protein.


ensembl_gene_id: JWYL7_0135
symbol: JWYL7_0135
gene_biotype: protein_coding
description:
  KEGG: FlgL, flagellin and related hook-associated proteins; TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; Belongs to the bacterial flagellin family.


ensembl_gene_id: JWYL7_0136
symbol: fliW
gene_biotype: protein_coding
description:
  Flagellar assembly factor fliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.


ensembl_gene_id: JWYL7_0137
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: JWYL7_0139
symbol: JWYL7_0139
gene_biotype: protein_coding
description:
  Flagellar hook-associated 2 domain-containing protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: JWYL7_0142
symbol: JWYL7_0142
gene_biotype: protein_coding
description:
  PFAM: Lysine-2,3-aminomutase, C-terminal domain, Radical SAM domain protein; TIGRFAM: lysine 2,3-aminomutase YodO family protein; KEGG: lysine 2,3-aminomutase YodO family protein.


ensembl_gene_id: JWYL7_0143
symbol: hpf
gene_biotype: protein_coding
description:
  Sigma 54 modulation protein/ribosomal protein S30EA; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: JWYL7_0144
symbol: secA
gene_biotype: protein_coding
description:
  Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: JWYL7_0145
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: JWYL7_0149
symbol: JWYL7_0149
gene_biotype: protein_coding
description:
  Flagellin domain protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: JWYL7_0151
symbol: JWYL7_0151
gene_biotype: protein_coding
description:
  PFAM: Tex-like protein, RNA binding S1 domain protein; KEGG: S1 RNA-binding domain-containing protein; SMART: Resolvase RNase H domain protein fold-containing protein, RNA-binding domain, S1.


ensembl_gene_id: JWYL7_0152
symbol: JWYL7_0152
gene_biotype: protein_coding
description:
  KEGG: sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein, response regulator receiver, histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein, response regulator receiver, histidine kinase A domain protein.


ensembl_gene_id: JWYL7_0153
symbol: JWYL7_0153
gene_biotype: protein_coding
description:
  ATP-binding region ATPase domain protein; KEGG: sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein.


ensembl_gene_id: JWYL7_0155
symbol: JWYL7_0155
gene_biotype: protein_coding
description:
  ECF transporter, substrate-specific component; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family.


ensembl_gene_id: JWYL7_0156
symbol: JWYL7_0156
gene_biotype: protein_coding
description:
  TIGRFAM: Uncharacterized protein family UPF0079, ATPase; KEGG: ATP/GTP hydrolase; PFAM: Uncharacterized protein family UPF0079, ATPase.


ensembl_gene_id: JWYL7_0157
symbol: JWYL7_0157
gene_biotype: protein_coding
description:
  Universal protein YeaZ; PFAM: peptidase M22 glycoprotease; TIGRFAM: universal protein YeaZ; KEGG: peptidase, M22 family.


ensembl_gene_id: JWYL7_0158
symbol: JWYL7_0158
gene_biotype: protein_coding
description:
  Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.


ensembl_gene_id: JWYL7_0159
symbol: tsaD
gene_biotype: protein_coding
description:
  O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: JWYL7_0161
symbol: JWYL7_0161
gene_biotype: protein_coding
description:
  KEGG: ABC transporter ATP-binding protein; PFAM: ABC transporter related protein; SMART: AAA ATPase.


ensembl_gene_id: JWYL7_0162
symbol: rex
gene_biotype: protein_coding
description:
  Redox-sensing transcriptional repressor Rex; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: JWYL7_0163
symbol: JWYL7_0163
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: JWYL7_0164
symbol: JWYL7_0164
gene_biotype: protein_coding
description:
  Transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; KEGG: regulatory protein ArsR; SMART: regulatory protein ArsR.


ensembl_gene_id: JWYL7_0165
symbol: JWYL7_0165
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, MerR family; KEGG: resolvase domain-containing protein; PFAM: Resolvase domain-containing protein; SMART: Resolvase domain-containing protein, regulatory protein MerR.


ensembl_gene_id: JWYL7_0166
symbol: JWYL7_0166
gene_biotype: protein_coding
description:
  TIGRFAM: transposase, IS605 OrfB family; KEGG: transposase; PFAM: transposase IS605 OrfB, Transposase, helix-turn-helix domain-containing protein, transposase IS891/IS1136/IS1341 family.


ensembl_gene_id: JWYL7_0167
symbol: JWYL7_0167
gene_biotype: protein_coding
description:
  Arsenical-resistance protein; PFAM: Bile acid:sodium symporter; TIGRFAM: arsenical-resistance protein; KEGG: arsenical-resistance protein.


ensembl_gene_id: JWYL7_0169
symbol: JWYL7_0169
gene_biotype: protein_coding
description:
  KEGG: gdh, NADP-specific glutamate dehydrogenase Gdh; SMART: Glu/Leu/Phe/Val dehydrogenase; PFAM: Glu/Leu/Phe/Val dehydrogenase, Glu/Leu/Phe/Val dehydrogenase dimerization region; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: JWYL7_0171
symbol: pyrB
gene_biotype: protein_coding
description:
  KEGG: pyrB, aspartate carbamoyltransferase; TIGRFAM: aspartate carbamoyltransferase; HAMAP : Aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain-containing protein, aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: JWYL7_0172
symbol: JWYL7_0172
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: JWYL7_0173
symbol: pyrF
gene_biotype: protein_coding
description:
  SMART: Orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; HAMAP : Orotidine 5'-phosphate decarboxylase; KEGG: pyrF, orotidine 5'-phosphate decarboxylase; Belongs to the OMP decarboxylase family. Type 2 subfamily.


ensembl_gene_id: JWYL7_0174
symbol: JWYL7_0174
gene_biotype: protein_coding
description:
  PFAM: Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulfur cluster binding domain-containing protein, Oxidoreductase FAD-binding domain protein; KEGG: dihydroorotate dehydrogenase electron transfer subunit.


ensembl_gene_id: JWYL7_0176
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: JWYL7_0181
symbol: JWYL7_0181
gene_biotype: protein_coding
description:
  SMART: response regulator receiver; PFAM: response regulator receiver; KEGG: Chemotaxis protein cheY.


ensembl_gene_id: JWYL7_0183
symbol: JWYL7_0183
gene_biotype: protein_coding
description:
  DNA-(apurinic or apyrimidinic site) lyase; PFAM: 8-oxoguanine DNA glycosylase domain-containing protein, HhH-GPD family protein; SMART: HhH-GPD family protein; KEGG: DNA glycosylase.


ensembl_gene_id: JWYL7_0184
symbol: JWYL7_0184
gene_biotype: protein_coding
description:
  Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.


ensembl_gene_id: JWYL7_0185
symbol: groS
gene_biotype: protein_coding
description:
  10 kDa chaperonin; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: JWYL7_0186
symbol: groL
gene_biotype: protein_coding
description:
  60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: JWYL7_0187
symbol: JWYL7_0187
gene_biotype: protein_coding
description:
  Arginase; TIGRFAM: arginase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: arginase; Belongs to the arginase family.


ensembl_gene_id: JWYL7_0188
symbol: JWYL7_0188
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; SMART: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase.


ensembl_gene_id: JWYL7_0189
symbol: JWYL7_0189
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF111; KEGG: hypothetical protein; TIGRFAM: protein of unknown function DUF111.


ensembl_gene_id: JWYL7_0191
symbol: guaB
gene_biotype: protein_coding
description:
  IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: JWYL7_0194
symbol: purC
gene_biotype: protein_coding
description:
  PFAM: SAICAR synthetase; KEGG: phosphoribosylaminoimidazole-succinocarboxamide synthase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; HAMAP : Phosphoribosylaminoimidazole-succinocarboxamide synthase.


ensembl_gene_id: JWYL7_0195
symbol: JWYL7_0195
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; KEGG: purF, amidophosphoribosyltransferase.


ensembl_gene_id: JWYL7_0196
symbol: purM
gene_biotype: protein_coding
description:
  KEGG: phosphoribosylformylglycinamidine cyclo-ligase; TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein domain protein, AIR synthase related protein.


ensembl_gene_id: JWYL7_0197
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: JWYL7_0198
symbol: purH
gene_biotype: protein_coding
description:
  Bifunctional purine biosynthesis protein purH; SMART: AICARFT/IMPCHase bienzyme, MGS domain protein; PFAM: AICARFT/IMPCHase bienzyme, MGS domain protein; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; HAMAP : Bifunctional purine biosynthesis protein purH; KEGG: purH, bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase.


ensembl_gene_id: JWYL7_0199
symbol: purD
gene_biotype: protein_coding
description:
  TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: purD, phosphoribosylamine--glycine ligase; HAMAP : Phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain-containing protein, Phosphoribosylglycinamide synthetase, N-domain-containing protein, Phosphoribosylglycinamide synthetase, C-domain-containing protein; Belongs to the GARS family.


ensembl_gene_id: JWYL7_0200
symbol: JWYL7_0200
gene_biotype: protein_coding
description:
  PFAM: AIR synthase related protein domain protein, AIR synthase related protein; TIGRFAM: phosphoribosylformylglycinamidine synthase; KEGG: phosphoribosylformylglycinamidine synthase.


ensembl_gene_id: JWYL7_0201
symbol: JWYL7_0201
gene_biotype: protein_coding
description:
  Methyl-accepting chemotaxis sensory transducer; KEGG: hypothetical protein; PFAM: hydrogenase large subunit domain protein, chemotaxis sensory transducer, 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein, Fe-S cluster domain protein; SMART: chemotaxis sensory transducer.


ensembl_gene_id: JWYL7_0203
symbol: JWYL7_0203
gene_biotype: protein_coding
description:
  TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490, HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: phosphoserine phosphatase.


ensembl_gene_id: JWYL7_0205
symbol: JWYL7_0205
gene_biotype: protein_coding
description:
  Na+/Ca+ antiporter, CaCA family; PFAM: sodium/calcium exchanger membrane region; TIGRFAM: Na+/Ca+ antiporter, CaCA family; KEGG: hypothetical protein.


ensembl_gene_id: JWYL7_0208
symbol: carA
gene_biotype: protein_coding
description:
  KEGG: carA, carbamoyl phosphate synthase small subunit; HAMAP : Carbamoyl-phosphate synthase small chain; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain, Glutamine amidotransferase type 1; SMART: Carbamoyl-phosphate synthase small chain; Belongs to the CarA family.


ensembl_gene_id: JWYL7_0209
symbol: carB
gene_biotype: protein_coding
description:
  HAMAP : Carbamoyl-phosphate synthase large subunit glutamine-dependent; KEGG: carB, carbamoyl-phosphate synthase large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding protein, Carbamoyl-phosphate synthetase large chain domain protein, Carbamoyl-phosphate synthetase large chain oligomerisation, MGS domain protein; SMART: Carbamoyl-phosphate synthetase large chain oligomerisation, MGS domain protein.


ensembl_gene_id: JWYL7_0211
symbol: JWYL7_0211
gene_biotype: protein_coding
description:
  ABC-type transporter, integral membrane subunit; KEGG: livH, leucine/isoleucine/valine ABC transporter membrane protein; PFAM: ABC-type transporter, integral membrane subunit; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: JWYL7_0212
symbol: JWYL7_0212
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: JWYL7_0213
symbol: JWYL7_0213
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related protein; SMART: AAA ATPase; KEGG: livG, leucine/isoleucine/valine ABC transporter ATP-binding protein.


ensembl_gene_id: JWYL7_0214
symbol: JWYL7_0214
gene_biotype: protein_coding
description:
  Phosphonate-transporting ATPase; PFAM: ABC transporter related protein; KEGG: ABC transporter-like protein; SMART: AAA ATPase.


ensembl_gene_id: JWYL7_0215
symbol: JWYL7_0215
gene_biotype: protein_coding
description:
  TIGRFAM: MATE efflux family protein; KEGG: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE.


ensembl_gene_id: JWYL7_0217
symbol: JWYL7_0217
gene_biotype: protein_coding
description:
  PFAM: UvrD-like DNA helicase, Helicase superfamily 1 UvrD-related protein; TIGRFAM: ATP-dependent DNA helicase PcrA; KEGG: ATP-dependent DNA helicase.


ensembl_gene_id: JWYL7_0219
symbol: JWYL7_0219
gene_biotype: protein_coding
description:
  PFAM: flavin reductase domain protein FMN-binding protein; KEGG: flavin reductase domain-containing FMN-binding protein.


ensembl_gene_id: JWYL7_0221
symbol: JWYL7_0221
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: JWYL7_0222
symbol: JWYL7_0222
gene_biotype: protein_coding
description:
  KEGG: inorganic diphosphatase; PFAM: phosphoesterase RecJ domain protein, DHHA2 domain protein, CBS domain containing protein, DRTGG domain protein.


ensembl_gene_id: JWYL7_0224
symbol: JWYL7_0224
gene_biotype: protein_coding
description:
  KEGG: methyl-accepting chemotaxis protein/family 5 extracellular solute-binding protein; PFAM: ABC-type transporter, periplasmic subunit, chemotaxis sensory transducer; SMART: chemotaxis sensory transducer.


ensembl_gene_id: JWYL7_0225
symbol: JWYL7_0225
gene_biotype: protein_coding
description:
  Acetaldehyde dehydrogenase (acetylating); KEGG: alcohol dehydrogenase; PFAM: iron-containing alcohol dehydrogenase, Aldehyde Dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.


ensembl_gene_id: JWYL7_0226
symbol: JWYL7_0226
gene_biotype: protein_coding
description:
  Protein of unknown function DUF1097; KEGG: glutathione-regulated potassium-efflux system protein; PFAM: protein of unknown function DUF1097.


ensembl_gene_id: JWYL7_0228
symbol: JWYL7_0228
gene_biotype: protein_coding
description:
  PFAM: Radical SAM domain protein; TIGRFAM: Conserved hypothetical protein CHP01212; SMART: Elongator protein 3/MiaB/NifB; KEGG: putative radical SAM protein.


ensembl_gene_id: JWYL7_0231
symbol: JWYL7_0231
gene_biotype: protein_coding
description:
  PFAM: beta-lactamase domain protein; KEGG: zinc metallohydrolase; SMART: beta-lactamase domain protein.


ensembl_gene_id: JWYL7_0232
symbol: JWYL7_0232
gene_biotype: protein_coding
description:
  RelA/SpoT domain protein; KEGG: guanosine 3',5'-bis-pyrophosphate; PFAM: RelA/SpoT domain protein; SMART: RelA/SpoT domain protein.


ensembl_gene_id: JWYL7_0235
symbol: JWYL7_0235
gene_biotype: protein_coding
description:
  KEGG: ABC transporter; SMART: AAA ATPase; PFAM: ABC transporter transmembrane region, ABC transporter related protein.


ensembl_gene_id: JWYL7_0240
symbol: JWYL7_0240
gene_biotype: protein_coding
description:
  KEGG: methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer.


ensembl_gene_id: JWYL7_0241
symbol: JWYL7_0241
gene_biotype: protein_coding
description:
  KEGG: fructose-1,6-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; TIGRFAM: fructose-1,6-bisphosphate aldolase, class II, ketose-bisphosphate aldolase.


ensembl_gene_id: JWYL7_0243
symbol: JWYL7_0243
gene_biotype: protein_coding
description:
  PFAM: pseudouridine synthase, RNA-binding S4 domain protein; KEGG: rluA, ribosomal small subunit pseudouridine synthase A; SMART: RNA-binding S4 domain protein; TIGRFAM: pseudouridine synthase Rsu; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: JWYL7_0244
symbol: JWYL7_0244
gene_biotype: protein_coding
description:
  Hydrolase ycdX; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; HAMAP : hydrolase ycdX; KEGG: PHP domain-containing protein.


ensembl_gene_id: JWYL7_0245
symbol: JWYL7_0245
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmA family; KEGG: tRNA (Uracil-5-)-methyltransferase; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: (Uracil-5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: JWYL7_0247
symbol: JWYL7_0247
gene_biotype: protein_coding
description:
  SMART: Resolvase domain-containing protein; PFAM: Resolvase domain-containing protein, Recombinase; KEGG: site-specific recombinase, DNA invertase Pin.


ensembl_gene_id: JWYL7_0251
symbol: JWYL7_0251
gene_biotype: protein_coding
description:
  PFAM: N-6 DNA methylase, N6 adenine-specific DNA methyltransferase, N12 class, N-terminal; KEGG: N-6 DNA methylase.


ensembl_gene_id: JWYL7_0252
symbol: JWYL7_0252
gene_biotype: protein_coding
description:
  PFAM: restriction modification system DNA specificity domain-containing protein; KEGG: restriction modification system DNA specificity domain-containing protein.


ensembl_gene_id: JWYL7_0254
symbol: JWYL7_0254
gene_biotype: protein_coding
description:
  Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.


ensembl_gene_id: JWYL7_0258
symbol: JWYL7_0258
gene_biotype: protein_coding
description:
  KEGG: cation diffusion facilitator family transporter; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein.


ensembl_gene_id: JWYL7_0262
symbol: JWYL7_0262
gene_biotype: protein_coding
description:
  PFAM: Holin toxin secretion/phage lysis; KEGG: toxin secretion/phage lysis holin; TIGRFAM: toxin secretion/phage lysis holin.


ensembl_gene_id: JWYL7_0263
symbol: JWYL7_0263
gene_biotype: protein_coding
description:
  KEGG: N-acetylmuramoyl-L-alanine amidase family 2; PFAM: N-acetylmuramoyl-L-alanine amidase family 2, Sporulation domain-containing protein; SMART: N-acetylmuramoyl-L-alanine amidase family 2.


ensembl_gene_id: JWYL7_0265
symbol: JWYL7_0265
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; PFAM: Resolvase domain-containing protein, Recombinase zinc beta ribbon domain, Recombinase; SMART: Resolvase domain-containing protein.


ensembl_gene_id: JWYL7_0267
symbol: JWYL7_0267
gene_biotype: protein_coding
description:
  KEGG: site-specific recombinase; PFAM: Resolvase domain-containing protein, Recombinase, Recombinase zinc beta ribbon domain; SMART: Resolvase domain-containing protein.


ensembl_gene_id: JWYL7_0269
symbol: JWYL7_0269
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; SMART: response regulator receiver, transcriptional regulator domain-containing protein; KEGG: transcriptional regulator; PFAM: response regulator receiver, transcriptional regulator domain-containing protein.


ensembl_gene_id: JWYL7_0270
symbol: JWYL7_0270
gene_biotype: protein_coding
description:
  PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein; KEGG: integral membrane sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein.


ensembl_gene_id: JWYL7_0273
symbol: JWYL7_0273
gene_biotype: protein_coding
description:
  Heme-transporting ATPase; PFAM: ABC transporter related protein; SMART: AAA ATPase; KEGG: ABC transporter.


ensembl_gene_id: JWYL7_0274
symbol: JWYL7_0274
gene_biotype: protein_coding
description:
  PFAM: 5-methylcytosine restriction system component-like protein; KEGG: 5-methylcytosine restriction system component-like protein.


ensembl_gene_id: JWYL7_0275
symbol: JWYL7_0275
gene_biotype: protein_coding
description:
  PFAM: ATPase associated with various cellular activities AAA_5, Uncharacterized protein family UPF0310; KEGG: ATPase.


ensembl_gene_id: JWYL7_0279
symbol: JWYL7_0279
gene_biotype: protein_coding
description:
  2,4-dienoyl-CoA reductase (NADPH); KEGG: NADH:flavin oxidoreductase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, FAD-dependent pyridine nucleotide-disulfide oxidoreductase, Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain.


ensembl_gene_id: JWYL7_0280
symbol: JWYL7_0280
gene_biotype: protein_coding
description:
  KEGG: short-chain dehydrogenase/reductase SDR; PFAM: short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: JWYL7_0284
symbol: JWYL7_0284
gene_biotype: protein_coding
description:
  Transcriptional regulator, ArsR family; SMART: regulatory protein ArsR; PFAM: regulatory protein ArsR; KEGG: regulatory protein ArsR.


ensembl_gene_id: JWYL7_0285
symbol: JWYL7_0285
gene_biotype: protein_coding
description:
  PFAM: E1-E2 ATPase-associated domain protein, Heavy metal transport/detoxification protein, Haloacid dehalogenase domain protein hydrolase; TIGRFAM: heavy metal translocating P-type ATPase, ATPase, P-type (transporting), HAD superfamily, subfamily IC, cadmium-translocating P-type ATPase; KEGG: heavy metal translocating P-type ATPase.


ensembl_gene_id: JWYL7_0286
symbol: lspA
gene_biotype: protein_coding
description:
  Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: JWYL7_0287
symbol: JWYL7_0287
gene_biotype: protein_coding
description:
  KEGG: mercuric transport protein periplasmic component; PFAM: BFD domain protein [2Fe-2S]-binding domain protein.


ensembl_gene_id: JWYL7_0289
symbol: JWYL7_0289
gene_biotype: protein_coding
description:
  PFAM: Resolvase domain-containing protein, Recombinase zinc beta ribbon domain, Recombinase; KEGG: resolvase domain-containing protein; SMART: Resolvase domain-containing protein.


ensembl_gene_id: JWYL7_0292
symbol: JWYL7_0292
gene_biotype: protein_coding
description:
  SMART: nitrogen regulatory protein P-II; PFAM: nitrogen regulatory protein P-II; KEGG: nitrogen regulatory protein P-II.


ensembl_gene_id: JWYL7_0293
symbol: JWYL7_0293
gene_biotype: protein_coding
description:
  TIGRFAM: cob(I)alamin adenosyltransferase; KEGG: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP.


ensembl_gene_id: JWYL7_0294
symbol: JWYL7_0294
gene_biotype: protein_coding
description:
  KEGG: 6-phospho-beta-glucosidase; PFAM: glycoside hydrolase family 1; Belongs to the glycosyl hydrolase 1 family.


ensembl_gene_id: JWYL7_0295
symbol: JWYL7_0295
gene_biotype: protein_coding
description:
  SMART: chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer, histidine kinase HAMP region domain protein, MCP-signal associated domain; KEGG: methyl-accepting chemotaxis sensory transducer.


ensembl_gene_id: JWYL7_0299
symbol: JWYL7_0299
gene_biotype: protein_coding
description:
  PFAM: TipAS antibiotic-recognition domain-containing protein; KEGG: MerR family transcriptional regulator; SMART: regulatory protein MerR.


ensembl_gene_id: JWYL7_0301
symbol: JWYL7_0301
gene_biotype: protein_coding
description:
  KEGG: diguanylate cyclase; TIGRFAM: diguanylate cyclase; SMART: GGDEF domain containing protein; PFAM: GGDEF domain containing protein.


ensembl_gene_id: JWYL7_0303
symbol: JWYL7_0303
gene_biotype: protein_coding
description:
  PFAM: GGDEF domain containing protein, response regulator receiver; TIGRFAM: diguanylate cyclase; SMART: GGDEF domain containing protein, response regulator receiver; KEGG: response regulator receiver modulated diguanylate cyclase.


ensembl_gene_id: JWYL7_0304
symbol: JWYL7_0304
gene_biotype: protein_coding
description:
  SMART: PBS lyase HEAT domain protein repeat-containing protein; KEGG: PBS lyase HEAT domain-containing protein.


ensembl_gene_id: JWYL7_0306
symbol: JWYL7_0306
gene_biotype: protein_coding
description:
  PFAM: Conserved hypothetical protein CHP00245; TIGRFAM: Conserved hypothetical protein CHP00245; KEGG: hypothetical protein.


ensembl_gene_id: JWYL7_0308
symbol: JWYL7_0308
gene_biotype: protein_coding
description:
  Transcriptional regulator with only HTH domain, AraC family; KEGG: helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix, AraC domain-containing protein; SMART: Helix-turn-helix, AraC domain-containing protein.


ensembl_gene_id: JWYL7_0310
symbol: JWYL7_0310
gene_biotype: protein_coding
description:
  KEGG: transport system permease; PFAM: ABC-type transporter, integral membrane subunit; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: JWYL7_0315
symbol: JWYL7_0315
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: JWYL7_0318
symbol: JWYL7_0318
gene_biotype: protein_coding
description:
  Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase, PAS sensor protein; SMART: EAL domain-containing protein, GGDEF domain containing protein, PAS domain containing protein; KEGG: hypothetical protein; PFAM: EAL domain-containing protein, PAS domain containing protein, GGDEF domain containing protein.


ensembl_gene_id: JWYL7_0319
symbol: JWYL7_0319
gene_biotype: protein_coding
description:
  PFAM: UV-endonuclease UvdE, protein of unknown function DUF1722; TIGRFAM: UV-endonuclease UvdE; KEGG: UV endonuclease.


ensembl_gene_id: JWYL7_0320
symbol: JWYL7_0320
gene_biotype: protein_coding
description:
  KEGG: metal dependent phosphohydrolase; TIGRFAM: metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region; PFAM: metal-dependent phosphohydrolase HD sub domain-containing protein.


ensembl_gene_id: JWYL7_0322
symbol: JWYL7_0322
gene_biotype: protein_coding
description:
  acetyl-CoA acetyltransferase; PFAM: Thiolase domain-containing protein; TIGRFAM: acetyl-CoA acetyltransferase; KEGG: acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: JWYL7_0328
symbol: JWYL7_0328
gene_biotype: protein_coding
description:
  Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: EAL domain-containing protein, GGDEF domain containing protein, PAS fold-3 domain protein, PAS fold domain protein; SMART: EAL domain-containing protein, PAS domain containing protein, PAC repeat-containing protein, GGDEF domain containing protein; TIGRFAM: diguanylate cyclase, PAS sensor protein; KEGG: hypothetical protein.


ensembl_gene_id: JWYL7_0330
symbol: JWYL7_0330
gene_biotype: protein_coding
description:
  TIGRFAM: beta-phosphoglucomutase, HAD-superfamily hydrolase, subfamily IA, variant 3, beta-phosphoglucomutase family hydrolase; KEGG: beta-phosphoglucomutase.


ensembl_gene_id: JWYL7_0331
symbol: JWYL7_0331
gene_biotype: protein_coding
description:
  KEGG: Kojibiose phosphorylase; PFAM: glycoside hydrolase family 65 central catalytic, glycoside hydrolase family 65 domain protein.


ensembl_gene_id: JWYL7_0332
symbol: JWYL7_0332
gene_biotype: protein_coding
description:
  SMART: regulatory protein LacI; KEGG: LacI family transcriptional regulator; PFAM: regulatory protein LacI.


ensembl_gene_id: JWYL7_0334
symbol: JWYL7_0334
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transport systems inner membrane component.


ensembl_gene_id: JWYL7_0335
symbol: JWYL7_0335
gene_biotype: protein_coding
description:
  ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transport systems inner membrane component; PFAM: ABC-type transporter, integral membrane subunit.


ensembl_gene_id: JWYL7_0336
symbol: JWYL7_0336
gene_biotype: protein_coding
description:
  TIGRFAM: hemerythrin-like metal-binding protein; KEGG: iron-binding protein, hemerythrin; PFAM: Hemerythrin HHE cation binding domain protein.


ensembl_gene_id: JWYL7_0337
symbol: JWYL7_0337
gene_biotype: protein_coding
description:
  TIGRFAM: amino acid carrier protein; KEGG: sodium/alanine symporter; PFAM: sodium:alanine symporter.


ensembl_gene_id: JWYL7_0338
symbol: clpB
gene_biotype: protein_coding
description:
  ATP-dependent chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: JWYL7_0340
symbol: JWYL7_0340
gene_biotype: protein_coding
description:
  Small GTP-binding protein; PFAM: Ferrous iron transport protein B domain-containing protein, nucleoside recognition domain protein, Ferrous iron transport B domain-containing protein; KEGG: small GTP-binding protein; TIGRFAM: small GTP-binding protein.


ensembl_gene_id: JWYL7_0342
symbol: mprF
gene_biotype: protein_coding
description:
  Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.


ensembl_gene_id: JWYL7_0343
symbol: JWYL7_0343
gene_biotype: protein_coding
description:
  PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol/serine O-phosphatidyltransferase; KEGG: CDP-diacylglycerol/serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: JWYL7_0344
symbol: JWYL7_0344
gene_biotype: protein_coding
description:
  Transcriptional regulator, ArsR family; SMART: regulatory protein ArsR; PFAM: regulatory protein ArsR; KEGG: ArsR family transcriptional regulator.


ensembl_gene_id: JWYL7_0346
symbol: JWYL7_0346
gene_biotype: protein_coding
description:
  KEGG: redox-active disulfide protein 2; TIGRFAM: redox-active disulfide protein 2; PFAM: Thioredoxin-like fold-containing protein.


ensembl_gene_id: JWYL7_0347
symbol: JWYL7_0347
gene_biotype: protein_coding
description:
  CoA-disulfide reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, pyridine nucleotide-disulfide oxidoreductase dimerization region, Rhodanese-like protein, FAD-dependent pyridine nucleotide-disulfide oxidoreductase; SMART: Rhodanese-like protein; KEGG: NAD(FAD)-dependent dehydrogenase.


ensembl_gene_id: JWYL7_0349
symbol: JWYL7_0349
gene_biotype: protein_coding
description:
  SMART: UbiC transcription regulator-associated domain-containing protein, regulatory protein GntR HTH; KEGG: GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain-containing protein, regulatory protein GntR HTH.


ensembl_gene_id: JWYL7_0350
symbol: JWYL7_0350
gene_biotype: protein_coding
description:
  PFAM: Na+/H+ antiporter NhaC-like protein; KEGG: Na+/H+ antiporter NhaC; TIGRFAM: Na+/H+ antiporter NhaC.


ensembl_gene_id: JWYL7_0351
symbol: JWYL7_0351
gene_biotype: protein_coding
description:
  KEGG: germination-specific protease; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Belongs to the peptidase S8 family.


ensembl_gene_id: JWYL7_0353
symbol: JWYL7_0353
gene_biotype: protein_coding
description:
  Glycoside hydrolase family 18; KEGG: yaaH, spore germination protein; PFAM: glycoside hydrolase family 18; SMART: chitinase II, Peptidoglycan-binding LysM.


ensembl_gene_id: JWYL7_0356
symbol: JWYL7_0356
gene_biotype: protein_coding
description:
  TIGRFAM: signal peptidase I; KEGG: signal peptidase i; PFAM: Peptidase S24/S26A/S26B, conserved region; Belongs to the peptidase S26 family.


ensembl_gene_id: JWYL7_0358
symbol: JWYL7_0358
gene_biotype: protein_coding
description:
  PFAM: CBS domain containing protein; KEGG: signal-transduction protein; SMART: CBS domain containing protein.


ensembl_gene_id: JWYL7_0359
symbol: JWYL7_0359
gene_biotype: protein_coding
description:
  SMART: AAA ATPase; PFAM: phosphoribulokinase/uridine kinase; KEGG: phosphoribulokinase/uridine kinase.


ensembl_gene_id: JWYL7_0360
symbol: glsA
gene_biotype: protein_coding
description:
  HAMAP : Glutaminase; KEGG: glutaminase; TIGRFAM: glutaminase A; PFAM: Glutaminase; Belongs to the glutaminase family.


ensembl_gene_id: JWYL7_0361
symbol: JWYL7_0361
gene_biotype: protein_coding
description:
  Transcriptional regulator, ArsR family; KEGG: regulatory protein, arsr; SMART: regulatory protein ArsR.


ensembl_gene_id: JWYL7_0362
symbol: nfo
gene_biotype: protein_coding
description:
  Endonuclease 4; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.


ensembl_gene_id: JWYL7_0368
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: JWYL7_0369
symbol: JWYL7_0369
gene_biotype: protein_coding
description:
  PFAM: VanW family protein, peptidoglycan binding domain-containing protein, G5 domain protein; KEGG: hypothetical protein.


ensembl_gene_id: JWYL7_0371
symbol: JWYL7_0371
gene_biotype: protein_coding
description:
  KEGG: cof family hydrolase; TIGRFAM: Cof-like hydrolase, HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3.


ensembl_gene_id: JWYL7_0372
symbol: JWYL7_0372
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF362, 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein; KEGG: iron-sulfur protein.


ensembl_gene_id: JWYL7_0373
symbol: JWYL7_0373
gene_biotype: protein_coding
description:
  S-adenosyl-L-methionine dependent tRNA/rRNA methyltransferase, SpoU; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: JWYL7_0376
symbol: JWYL7_0376
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF362, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein; KEGG: iron-sulfur-binding protein.


ensembl_gene_id: JWYL7_0378
symbol: JWYL7_0378
gene_biotype: protein_coding
description:
  KEGG: trxB, thioredoxin reductase; TIGRFAM: thioredoxin reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, FAD-dependent pyridine nucleotide-disulfide oxidoreductase.


ensembl_gene_id: JWYL7_0380
symbol: JWYL7_0380
gene_biotype: protein_coding
description:
  KEGG: glycine reductase complex component B subunits alpha/beta; PFAM: Glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits.


ensembl_gene_id: JWYL7_0381
symbol: JWYL7_0381
gene_biotype: protein_coding
description:
  PFAM: glycine reductase complex selenoprotein A; KEGG: glycine/sarcosine/betaine reductase complex protein A.


ensembl_gene_id: JWYL7_0382
symbol: JWYL7_0382
gene_biotype: protein_coding
description:
  KEGG: glycine/sarcosine/betaine reductase complex protein A; PFAM: glycine reductase complex selenoprotein A.


ensembl_gene_id: JWYL7_0383
symbol: JWYL7_0383
gene_biotype: protein_coding
description:
  PFAM: Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase; KEGG: glycine reductase complex component B gamma subunit; TIGRFAM: glycine reductase, selenoprotein B, selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family.


ensembl_gene_id: JWYL7_0384
symbol: JWYL7_0384
gene_biotype: protein_coding
description:
  TIGRFAM: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family; KEGG: selenoprotein B.


ensembl_gene_id: JWYL7_0386
symbol: JWYL7_0386
gene_biotype: protein_coding
description:
  PFAM: fatty acid synthesis plsX protein; KEGG: glycine/sarcosine/betaine reductase complex component C subunit alpha.


ensembl_gene_id: JWYL7_0389
symbol: JWYL7_0389
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: JWYL7_0390
symbol: JWYL7_0390
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: nucleoside transport system permease; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: JWYL7_0393
symbol: thrS
gene_biotype: protein_coding
description:
  Threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: JWYL7_0394
symbol: ftsH
gene_biotype: protein_coding
description:
  Peptidase M41 FtsH domain protein; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: JWYL7_0395
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: JWYL7_0396
symbol: rpmI
gene_biotype: protein_coding
description:
  PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; KEGG: 50S ribosomal protein L35; HAMAP : 50S ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.


ensembl_gene_id: JWYL7_0397
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: JWYL7_0398
symbol: JWYL7_0398
gene_biotype: protein_coding
description:
  KEGG: acyl-CoA dehydrogenase domain-containing protein; PFAM: acyl-CoA dehydrogenase domain-containing protein.


ensembl_gene_id: JWYL7_0399
symbol: JWYL7_0399
gene_biotype: protein_coding
description:
  SMART: Electron transfer flavoprotein alpha/beta-subunit; KEGG: electron transfer flavoprotein alpha/beta-subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit.


ensembl_gene_id: JWYL7_0400
symbol: JWYL7_0400
gene_biotype: protein_coding
description:
  PFAM: Electron transfer flavoprotein alpha/beta-subunit, Electron transfer flavoprotein alpha subunit; KEGG: electron transfer flavoprotein alpha/beta-subunit; SMART: Electron transfer flavoprotein alpha/beta-subunit.


ensembl_gene_id: JWYL7_0401
symbol: JWYL7_0401
gene_biotype: protein_coding
description:
  TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; KEGG: Di-trans-poly-cis-decaprenylcistransferase.


ensembl_gene_id: JWYL7_0402
symbol: JWYL7_0402
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer.


ensembl_gene_id: JWYL7_0403
symbol: JWYL7_0403
gene_biotype: protein_coding
description:
  PFAM: thiamine S protein; TIGRFAM: thiamine biosynthesis protein ThiS; KEGG: thiS, hypothetical protein.


ensembl_gene_id: JWYL7_0404
symbol: JWYL7_0404
gene_biotype: protein_coding
description:
  KEGG: thiamine biosynthesis protein ThiF; TIGRFAM: thiamine biosynthesis protein ThiF; PFAM: UBA/THIF-type NAD/FAD binding protein.


ensembl_gene_id: JWYL7_0405
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: JWYL7_0406
symbol: JWYL7_0406
gene_biotype: protein_coding
description:
  Thiazole biosynthesis protein ThiH; PFAM: biotin and thiamin synthesis associated protein, Radical SAM domain protein; KEGG: thiH, thiamine biosynthesis protein ThiH; SMART: biotin and thiamin synthesis associated protein; TIGRFAM: thiazole biosynthesis protein ThiH.


ensembl_gene_id: JWYL7_0407
symbol: thiC
gene_biotype: protein_coding
description:
  Phosphomethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.


ensembl_gene_id: JWYL7_0409
symbol: JWYL7_0409
gene_biotype: protein_coding
description:
  KEGG: phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1.


ensembl_gene_id: JWYL7_0410
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: JWYL7_0411
symbol: JWYL7_0411
gene_biotype: protein_coding
description:
  TIGRFAM: potassium uptake protein, TrkH family; PFAM: cation transporter; KEGG: ktrB, potassium transporter ATPase.


ensembl_gene_id: JWYL7_0413
symbol: JWYL7_0413
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family, group 3; SMART: RNA 2-O ribose methyltransferase substrate binding protein; TIGRFAM: RNA methyltransferase, TrmH family, group 3; KEGG: RNA methylase; PFAM: tRNA/rRNA methyltransferase (SpoU), RNA 2-O ribose methyltransferase substrate binding protein; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: JWYL7_0414
symbol: pheS
gene_biotype: protein_coding
description:
  TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc, aminoacyl tRNA synthetase class II domain protein; KEGG: pheS, phenylalanyl-tRNA synthetase subunit alpha; HAMAP : Phenylalanyl-tRNA synthetase alpha chain; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: JWYL7_0415
symbol: pheT
gene_biotype: protein_coding
description:
  TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit; KEGG: pheT, phenylalanyl-tRNA ligase subunit beta; HAMAP : Phenylalanyl-tRNA synthetase beta chain; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: JWYL7_0416
symbol: JWYL7_0416
gene_biotype: protein_coding
description:
  Protein of unknown function DUF710; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: JWYL7_0419
symbol: JWYL7_0419
gene_biotype: protein_coding
description:
  Putative PAS/PAC sensor protein; KEGG: phosphatase; PFAM: protein phosphatase 2C domain protein, PAS fold-4 domain protein; SMART: protein phosphatase 2C domain protein.


ensembl_gene_id: JWYL7_0420
symbol: mutS2
gene_biotype: protein_coding
description:
  MutS2 protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: JWYL7_0422
symbol: JWYL7_0422
gene_biotype: protein_coding
description:
  (S)-2-hydroxy-acid oxidase; KEGG: fmn-dependent alpha-hydroxy acid dehydrogenase; PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase.


ensembl_gene_id: JWYL7_0423
symbol: argS
gene_biotype: protein_coding
description:
  TIGRFAM: arginyl-tRNA synthetase; KEGG: argS, arginyl-tRNA synthetase; HAMAP : Arginyl-tRNA synthetase.


ensembl_gene_id: JWYL7_0427
symbol: JWYL7_0427
gene_biotype: protein_coding
description:
  Protein of unknown function DUF4080; SMART: Elongator protein 3/MiaB/NifB; KEGG: adenosylcobamide-dependent radical SAM protein; PFAM: Domain of unknown function DUF4080, Radical SAM domain protein, cobalamin B12-binding domain protein.


ensembl_gene_id: JWYL7_0428
symbol: JWYL7_0428
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat-containing protein.


ensembl_gene_id: JWYL7_0430
symbol: JWYL7_0430
gene_biotype: protein_coding
description:
  Indolepyruvate ferredoxin oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.


ensembl_gene_id: JWYL7_0432
symbol: fhs
gene_biotype: protein_coding
description:
  PFAM: formate-tetrahydrofolate ligase FTHFS; HAMAP : Formate--tetrahydrofolate ligase; KEGG: formate-tetrahydrofolate ligase; Belongs to the formate--tetrahydrofolate ligase family.


ensembl_gene_id: JWYL7_0433
symbol: folD
gene_biotype: protein_coding
description:
  Bifunctional protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: JWYL7_0436
symbol: JWYL7_0436
gene_biotype: protein_coding
description:
  KEGG: DNA helicase, UvrD/REP type; PFAM: UvrD-like DNA helicase, Helicase superfamily 1 UvrD-related protein.


ensembl_gene_id: JWYL7_0437
symbol: speD
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 2 subfamily.


ensembl_gene_id: JWYL7_0438
symbol: JWYL7_0438
gene_biotype: protein_coding
description:
  PFAM: ATPase AAA-2 domain protein, AAA ATPase central domain protein, Clp ATPase domain-containing protein; KEGG: ATPase; SMART: Clp ATPase domain-containing protein, AAA ATPase; Belongs to the ClpA/ClpB family.


ensembl_gene_id: JWYL7_0439
symbol: JWYL7_0439
gene_biotype: protein_coding
description:
  NADH peroxidase; PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, pyridine nucleotide-disulfide oxidoreductase dimerization region, FAD-dependent pyridine nucleotide-disulfide oxidoreductase; KEGG: FAD-dependent pyridine nucleotide-disulfide oxidoreductase.


ensembl_gene_id: JWYL7_0444
symbol: JWYL7_0444
gene_biotype: protein_coding
description:
  PFAM: multi antimicrobial extrusion protein MatE; KEGG: mate efflux family protein; TIGRFAM: MATE efflux family protein.


ensembl_gene_id: JWYL7_0450
symbol: thiI
gene_biotype: protein_coding
description:
  tRNA sulfurtransferase; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.


ensembl_gene_id: JWYL7_0452
symbol: JWYL7_0452
gene_biotype: protein_coding
description:
  Pyruvate formate-lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.


ensembl_gene_id: JWYL7_0453
symbol: JWYL7_0453
gene_biotype: protein_coding
description:
  KEGG: plfB, pyruvate formate-lyase; TIGRFAM: formate acetyltransferase; PFAM: pyruvate formate-lyase PFL, formate C-acetyltransferase glycine radical.


ensembl_gene_id: JWYL7_0454
symbol: JWYL7_0454
gene_biotype: protein_coding
description:
  PFAM: DEAD/DEAH box helicase domain protein, helicase domain-containing protein, DbpA RNA-binding domain protein; KEGG: ATP-dependent RNA helicase; SMART: DEAD-like helicase, helicase domain-containing protein; Belongs to the DEAD box helicase family.


ensembl_gene_id: JWYL7_0457
symbol: JWYL7_0457
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; PFAM: Phage phiEco32-like COOH-NH2 ligase-type 2, Endospore coat-associated protein YheC/D.


ensembl_gene_id: JWYL7_0458
symbol: JWYL7_0458
gene_biotype: protein_coding
description:
  PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: anti-sigma F factor antagonist; TIGRFAM: anti-sigma F factor antagonist, anti-anti-sigma factor; Belongs to the anti-sigma-factor antagonist family.


ensembl_gene_id: JWYL7_0459
symbol: spoIIAB
gene_biotype: protein_coding
description:
  Anti-sigma regulatory factor, serine/threonine protein kinase; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.


ensembl_gene_id: JWYL7_0460
symbol: JWYL7_0460
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 28 subunit, SigF; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: JWYL7_0461
symbol: JWYL7_0461
gene_biotype: protein_coding
description:
  Pyridoxal phosphate-dependent acyltransferase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.


ensembl_gene_id: JWYL7_0465
symbol: JWYL7_0465
gene_biotype: protein_coding
description:
  TIGRFAM: stage V sporulation protein AD; KEGG: stage V sporulation protein AD; PFAM: Stage V sporulation AD family protein.


ensembl_gene_id: JWYL7_0466
symbol: JWYL7_0466
gene_biotype: protein_coding
description:
  KEGG: sporulation stage V, protein AE; TIGRFAM: stage V sporulation protein AE; PFAM: SpoVA protein.


ensembl_gene_id: JWYL7_0468
symbol: JWYL7_0468
gene_biotype: protein_coding
description:
  KEGG: penicillin-binding protein, 1a family; PFAM: glycosyl transferase family 51, penicillin-binding protein transpeptidase.


ensembl_gene_id: JWYL7_0469
symbol: tyrS
gene_biotype: protein_coding
description:
  Tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.


ensembl_gene_id: JWYL7_0471
symbol: JWYL7_0471
gene_biotype: protein_coding
description:
  TIGRFAM: heavy metal translocating P-type ATPase, cadmium-translocating P-type ATPase, ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein, Heavy metal transport/detoxification protein, Haloacid dehalogenase domain protein hydrolase; KEGG: heavy metal translocating P-type ATPase.


ensembl_gene_id: JWYL7_0472
symbol: JWYL7_0472
gene_biotype: protein_coding
description:
  SMART: regulatory protein ArsR; KEGG: ArsR family transcriptional regulator; PFAM: regulatory protein ArsR.


ensembl_gene_id: JWYL7_0473
symbol: JWYL7_0473
gene_biotype: protein_coding
description:
  PFAM: sodium:dicarboxylate symporter; KEGG: hypothetical protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: JWYL7_0475
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein, HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: JWYL7_0480
symbol: JWYL7_0480
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0029; PFAM: Uncharacterized protein family UPF0029, N-terminal acting, Uncharacterized protein family UPF0029, Impact, C-terminal; KEGG: hypothetical protein; TIGRFAM: protein of unknown function UPF0029.


ensembl_gene_id: JWYL7_0481
symbol: JWYL7_0481
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF81; KEGG: hypothetical protein; overlaps another CDS with the same product name.


ensembl_gene_id: JWYL7_0483
symbol: nadE
gene_biotype: protein_coding
description:
  NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.


ensembl_gene_id: JWYL7_0484
symbol: JWYL7_0484
gene_biotype: protein_coding
description:
  HAMAP : UPF0082 protein yeeN; KEGG: hypothetical protein; TIGRFAM: protein of unknown function DUF28; PFAM: protein of unknown function DUF28.


ensembl_gene_id: JWYL7_0486
symbol: rodA
gene_biotype: protein_coding
description:
  Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: JWYL7_0487
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: JWYL7_0491
symbol: JWYL7_0491
gene_biotype: protein_coding
description:
  Manganese/iron superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: JWYL7_0493
symbol: ruvC
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease ruvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: JWYL7_0494
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction ATP-dependent DNA helicase ruvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: JWYL7_0495
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction ATP-dependent DNA helicase ruvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: JWYL7_0496
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: JWYL7_0497
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: JWYL7_0498
symbol: JWYL7_0498
gene_biotype: protein_coding
description:
  Preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: hypothetical protein; TIGRFAM: preprotein translocase, YajC subunit.


ensembl_gene_id: JWYL7_0499
symbol: JWYL7_0499
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; TIGRFAM: Protein of unknown function DUF3792, transmembrane; PFAM: Protein of unknown function DUF3792, transmembrane.


ensembl_gene_id: JWYL7_0500
symbol: JWYL7_0500
gene_biotype: protein_coding
description:
  Six-cysteine peptide SCIFF; KEGG: hypothetical protein; TIGRFAM: Six-cysteine peptide SCIFF; PFAM: Six-cysteine peptide SCIFF.


ensembl_gene_id: JWYL7_0501
symbol: JWYL7_0501
gene_biotype: protein_coding
description:
  PFAM: Radical SAM domain protein, 4Fe4S-binding SPASM domain; KEGG: radical SAM-family protein; TIGRFAM: SCIFF radical SAM maturase, 4Fe4S-binding SPASM domain.


ensembl_gene_id: JWYL7_0502
symbol: JWYL7_0502
gene_biotype: protein_coding
description:
  PFAM: transferase hexapeptide repeat containing protein; KEGG: carbonic anhydrase/acetyltransferase.


ensembl_gene_id: JWYL7_0503
symbol: secD
gene_biotype: protein_coding
description:
  SecD export membrane protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: JWYL7_0504
symbol: secF
gene_biotype: protein_coding
description:
  SecF protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: JWYL7_0506
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: JWYL7_0507
symbol: JWYL7_0507
gene_biotype: protein_coding
description:
  (p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: JWYL7_0508
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: JWYL7_0509
symbol: JWYL7_0509
gene_biotype: protein_coding
description:
  PFAM: beta-lactamase domain protein; KEGG: beta-lactamase domain-containing protein; SMART: beta-lactamase domain protein.


ensembl_gene_id: JWYL7_0510
symbol: JWYL7_0510
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB; PFAM: Radical SAM domain protein; KEGG: coproporphyrinogen III oxidase; TIGRFAM: Coproporphyrinogen III oxidase.


ensembl_gene_id: JWYL7_0511
symbol: hisS
gene_biotype: protein_coding
description:
  TIGRFAM: histidyl-tRNA synthetase; KEGG: hisS1, histidyl-tRNA synthetase HisS; HAMAP : Histidyl-tRNA synthetase; PFAM: Anticodon-binding domain protein.


ensembl_gene_id: JWYL7_0512
symbol: aspS
gene_biotype: protein_coding
description:
  Aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: JWYL7_0514
symbol: JWYL7_0514
gene_biotype: protein_coding
description:
  Metal sensitive transcriptional repressor; PFAM: protein of unknown function DUF156; KEGG: hypothetical protein.


ensembl_gene_id: JWYL7_0518
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: JWYL7_0519
symbol: JWYL7_0519
gene_biotype: protein_coding
description:
  PAS modulated sigma54 specific transcriptional regulator, Fis family; TIGRFAM: PAS sensor protein; SMART: AAA ATPase, PAS domain containing protein; KEGG: rocR, rocr; PFAM: sigma-54 factor interaction domain-containing protein, helix-turn-helix Fis-type.


ensembl_gene_id: JWYL7_0522
symbol: JWYL7_0522
gene_biotype: protein_coding
description:
  PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: pyridoxal-5'-phosphate-dependent protein beta subunit.


ensembl_gene_id: JWYL7_0524
symbol: JWYL7_0524
gene_biotype: protein_coding
description:
  PFAM: D-Lysine 56-aminomutase alpha subunit, cobalamin B12-binding domain protein; KEGG: oraE, D-ornithine aminomutase e component.


ensembl_gene_id: JWYL7_0525
symbol: JWYL7_0525
gene_biotype: protein_coding
description:
  KEGG: D-ornithine aminomutase; TIGRFAM: Conserved hypothetical protein CHP01319, GlmL; PFAM: Conserved hypothetical protein CHP01319, GlmL.


ensembl_gene_id: JWYL7_0527
symbol: JWYL7_0527
gene_biotype: protein_coding
description:
  Signal transduction histidine kinase, LytS; SMART: ATP-binding region ATPase domain protein, GAF domain protein; PFAM: 5TM Receptors of the LytS-YhcK type transmembrane region, histidine kinase internal region, ATP-binding region ATPase domain protein; KEGG: two-component sensor kinase.


ensembl_gene_id: JWYL7_0528
symbol: JWYL7_0528
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, LytTR family; SMART: LytTr DNA-binding region, response regulator receiver; KEGG: sensory transduction protein lytT; PFAM: LytTr DNA-binding region, response regulator receiver.


ensembl_gene_id: JWYL7_0529
symbol: JWYL7_0529
gene_biotype: protein_coding
description:
  KEGG: cstA, carbon starvation protein CstA; PFAM: carbon starvation protein CstA, CstA C-terminal domain.


ensembl_gene_id: JWYL7_0534
symbol: JWYL7_0534
gene_biotype: protein_coding
description:
  Integrase family protein; KEGG: site-specific tyrosine recombinase xerc; PFAM: integrase family protein, integrase domain protein SAM domain protein; Belongs to the 'phage' integrase family.


ensembl_gene_id: JWYL7_0541
symbol: JWYL7_0541
gene_biotype: protein_coding
description:
  Recombination protein U; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation. Belongs to the RecU family.


ensembl_gene_id: JWYL7_0550
symbol: JWYL7_0550
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; TIGRFAM: phage portal protein, SPP1 family; PFAM: Bacteriophage portal protein, SPP1 Gp6-like protein.


ensembl_gene_id: JWYL7_0551
symbol: JWYL7_0551
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; TIGRFAM: phage head morphogenesis protein, SPP1 gp7 family; PFAM: head morphogenesis protein SPP1 gp7.


ensembl_gene_id: JWYL7_0564
symbol: JWYL7_0564
gene_biotype: protein_coding
description:
  KEGG: N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase family 2, S-layer domain-containing protein; SMART: N-acetylmuramoyl-L-alanine amidase family 2.


ensembl_gene_id: JWYL7_0572
symbol: JWYL7_0572
gene_biotype: protein_coding
description:
  Tyrosine recombinase xerC; PFAM: integrase family protein, integrase domain protein SAM domain protein; HAMAP : Tyrosine recombinase xerC; KEGG: site-specific tyrosine recombinase xerc; Belongs to the 'phage' integrase family.


ensembl_gene_id: JWYL7_0573
symbol: JWYL7_0573
gene_biotype: protein_coding
description:
  KEGG: methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer, 4HB MCP domain, histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer, histidine kinase HAMP region domain protein.


ensembl_gene_id: JWYL7_0574
symbol: JWYL7_0574
gene_biotype: protein_coding
description:
  CoA-disulfide reductase; PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain, Rhodanese-like protein, pyridine nucleotide-disulfide oxidoreductase dimerization region, FAD-dependent pyridine nucleotide-disulfide oxidoreductase, SirA-like domain-containing protein; KEGG: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; SMART: Rhodanese-like protein; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: JWYL7_0579
symbol: JWYL7_0579
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, Crp/Fnr family; KEGG: cAMP-binding protein; PFAM: cyclic nucleotide-binding protein; SMART: cyclic nucleotide-binding protein.


ensembl_gene_id: JWYL7_0581
symbol: JWYL7_0581
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function DUF318, transmembrane; KEGG: permease-like protein; overlaps another CDS with the same product name.


ensembl_gene_id: JWYL7_0582
symbol: JWYL7_0582
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function DUF318, transmembrane; KEGG: hypothetical protein; overlaps another CDS with the same product name.


ensembl_gene_id: JWYL7_0586
symbol: JWYL7_0586
gene_biotype: protein_coding
description:
  PFAM: transposase IS605 OrfB, transposase IS891/IS1136/IS1341 family, Transposase, helix-turn-helix domain-containing protein; TIGRFAM: transposase, IS605 OrfB family; KEGG: transposase.


ensembl_gene_id: JWYL7_0587
symbol: JWYL7_0587
gene_biotype: protein_coding
description:
  KEGG: 1-phosphofructokinase; TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.


ensembl_gene_id: JWYL7_0588
symbol: JWYL7_0588
gene_biotype: protein_coding
description:
  Peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: alkyl hydroperoxide reductase.


ensembl_gene_id: JWYL7_0591
symbol: JWYL7_0591
gene_biotype: protein_coding
description:
  PFAM: CAT RNA-binding domain protein; KEGG: sacT, SACPA operon antiterminator; SMART: CAT RNA-binding domain protein.


ensembl_gene_id: JWYL7_0592
symbol: JWYL7_0592
gene_biotype: protein_coding
description:
  Transcriptional antiterminator, BglG; KEGG: sacT, SACPA operon antiterminator; PFAM: PRD domain protein.


ensembl_gene_id: JWYL7_0593
symbol: JWYL7_0593
gene_biotype: protein_coding
description:
  KEGG: PTS system, phosphocarrier protein; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr.


ensembl_gene_id: JWYL7_0594
symbol: JWYL7_0594
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: JWYL7_0598
symbol: JWYL7_0598
gene_biotype: protein_coding
description:
  KEGG: ATP--cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.


ensembl_gene_id: JWYL7_0599
symbol: JWYL7_0599
gene_biotype: protein_coding
description:
  KEGG: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: JWYL7_0600
symbol: JWYL7_0600
gene_biotype: protein_coding
description:
  PFAM: CinA domain protein; TIGRFAM: CinA domain protein; KEGG: competence/damage-inducible protein CinA; Belongs to the CinA family.


ensembl_gene_id: JWYL7_0601
symbol: JWYL7_0601
gene_biotype: protein_coding
description:
  PFAM: small acid-soluble spore protein alpha/beta type; KEGG: sspB, small acid-soluble spore protein B.


ensembl_gene_id: JWYL7_0605
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: JWYL7_0606
symbol: JWYL7_0606
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: JWYL7_0607
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: JWYL7_0608
symbol: JWYL7_0608
gene_biotype: protein_coding
description:
  Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.


ensembl_gene_id: JWYL7_0609
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: JWYL7_0610
symbol: JWYL7_0610
gene_biotype: protein_coding
description:
  PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein, Pyruvate/ketoisovalerate oxidoreductase, Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein, thiamine pyrophosphate TPP-binding domain-containing protein; SMART: Pyruvate-flavodoxin oxidoreductase, EKR domain-containing protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; KEGG: nifJ1, pyruvate-flavodoxin oxidoreductase NifJ.


ensembl_gene_id: JWYL7_0611
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: JWYL7_0616
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: JWYL7_0617
symbol: rsmH
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: JWYL7_0618
symbol: JWYL7_0618
gene_biotype: protein_coding
description:
  PFAM: Septum formation initiator; HAMAP : cell division protein FtsL family protein; KEGG: cell division protein FtsL.


ensembl_gene_id: JWYL7_0619
symbol: JWYL7_0619
gene_biotype: protein_coding
description:
  SMART: PASTA domain containing protein; PFAM: penicillin-binding protein transpeptidase, PASTA domain containing protein, Penicillin-binding protein dimerization domain-containing protein; KEGG: peptidoglycan glycosyltransferase; TIGRFAM: stage V sporulation protein D.


ensembl_gene_id: JWYL7_0620
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: JWYL7_0621
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: JWYL7_0622
symbol: mraY
gene_biotype: protein_coding
description:
  Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: JWYL7_0623
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: JWYL7_0624
symbol: JWYL7_0624
gene_biotype: protein_coding
description:
  PFAM: cell cycle protein; TIGRFAM: stage V sporulation protein E, cell division protein FtsW; KEGG: cell division/stage V sporulation protein; Belongs to the SEDS family.


ensembl_gene_id: JWYL7_0625
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: JWYL7_0631
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: JWYL7_0632
symbol: JWYL7_0632
gene_biotype: protein_coding
description:
  Peptidase U4 sporulation factor SpoIIGA; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.


ensembl_gene_id: JWYL7_0633
symbol: JWYL7_0633
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 28 subunit, SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: JWYL7_0634
symbol: JWYL7_0634
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 28 subunit, SigG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: JWYL7_0635
symbol: JWYL7_0635
gene_biotype: protein_coding
description:
  TIGRFAM: sporulation protein, YlmC/YmxH family; KEGG: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain protein.


ensembl_gene_id: JWYL7_0636
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional regulator, NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: JWYL7_0637
symbol: JWYL7_0637
gene_biotype: protein_coding
description:
  TIGRFAM: Multi-copper polyphenol oxidoreductase, laccase; KEGG: cytotoxic factor; PFAM: Multi-copper polyphenol oxidoreductase, laccase; Belongs to the multicopper oxidase YfiH/RL5 family.


ensembl_gene_id: JWYL7_0638
symbol: JWYL7_0638
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; KEGG: two-component response regulator; PFAM: transcriptional regulator domain-containing protein, response regulator receiver; SMART: response regulator receiver, transcriptional regulator domain-containing protein.


ensembl_gene_id: JWYL7_0639
symbol: JWYL7_0639
gene_biotype: protein_coding
description:
  PAS/PAC sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein, histidine kinase HAMP region domain protein, histidine kinase A domain protein; KEGG: sensor protein; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, PAS domain containing protein; TIGRFAM: PAS sensor protein.


ensembl_gene_id: JWYL7_0643
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein engA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: JWYL7_0644
symbol: plsY
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: JWYL7_0645
symbol: gpsA
gene_biotype: protein_coding
description:
  PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: glycerol-3-phosphate dehydrogenase; HAMAP : Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: JWYL7_0646
symbol: JWYL7_0646
gene_biotype: protein_coding
description:
  Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.


ensembl_gene_id: JWYL7_0648
symbol: JWYL7_0648
gene_biotype: protein_coding
description:
  Protein of unknown function UPF0001; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: JWYL7_0649
symbol: sepF
gene_biotype: protein_coding
description:
  Cell division protein sepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: JWYL7_0651
symbol: JWYL7_0651
gene_biotype: protein_coding
description:
  KEGG: RNA-binding cell division protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein.


ensembl_gene_id: JWYL7_0652
symbol: JWYL7_0652
gene_biotype: protein_coding
description:
  KEGG: divIVA, cell-division initiation protein diviva; TIGRFAM: DivIVA domain-containing protein; PFAM: DivIVA family protein.


ensembl_gene_id: JWYL7_0653
symbol: ileS
gene_biotype: protein_coding
description:
  Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.


ensembl_gene_id: JWYL7_0654
symbol: JWYL7_0654
gene_biotype: protein_coding
description:
  MTA/SAH nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.


ensembl_gene_id: JWYL7_0655
symbol: JWYL7_0655
gene_biotype: protein_coding
description:
  SMART: RNA-binding domain, S1; KEGG: RNA binding S1 domain-containing protein; PFAM: RNA binding S1 domain protein.


ensembl_gene_id: JWYL7_0657
symbol: trpS
gene_biotype: protein_coding
description:
  Tryptophan-tRNA ligase, bacterial-type; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: JWYL7_0661
symbol: JWYL7_0661
gene_biotype: protein_coding
description:
  Pseudouridine synthase, RluA family; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: JWYL7_0662
symbol: pyrR
gene_biotype: protein_coding
description:
  Bifunctional protein pyrR; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.


ensembl_gene_id: JWYL7_0665
symbol: JWYL7_0665
gene_biotype: protein_coding
description:
  PFAM: Fibronectin-binding A domain protein, protein of unknown function DUF814; KEGG: fibronectin-binding protein.


ensembl_gene_id: JWYL7_0666
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: JWYL7_0667
symbol: JWYL7_0667
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00255; PFAM: YicC-like domain-containing protein, domain of unknown function DUF1732.


ensembl_gene_id: JWYL7_0669
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: JWYL7_0670
symbol: JWYL7_0670
gene_biotype: protein_coding
description:
  KEGG: transposase; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS605 OrfB, Transposase, helix-turn-helix domain-containing protein.


ensembl_gene_id: JWYL7_0671
symbol: JWYL7_0671
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: JWYL7_0672
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: JWYL7_0673
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: JWYL7_0674
symbol: fmt
gene_biotype: protein_coding
description:
  Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: JWYL7_0676
symbol: JWYL7_0676
gene_biotype: protein_coding
description:
  PFAM: peptidase membrane zinc metallopeptidase; KEGG: peptidase membrane zinc metallopeptidase putative.


ensembl_gene_id: JWYL7_0678
symbol: rlmN
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: JWYL7_0679
symbol: JWYL7_0679
gene_biotype: protein_coding
description:
  KEGG: serine/threonine phosphatase; PFAM: protein phosphatase 2C domain protein; SMART: protein phosphatase 2C domain protein.


ensembl_gene_id: JWYL7_0680
symbol: JWYL7_0680
gene_biotype: protein_coding
description:
  SMART: serine/threonine protein kinase, PASTA domain containing protein; KEGG: prkC, protein kinase; PFAM: protein kinase, PASTA domain containing protein.


ensembl_gene_id: JWYL7_0681
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: JWYL7_0682
symbol: JWYL7_0682
gene_biotype: protein_coding
description:
  TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase; KEGG: rpe, d-ribulose-5-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.


ensembl_gene_id: JWYL7_0683
symbol: JWYL7_0683
gene_biotype: protein_coding
description:
  KEGG: thiN, thiamine pyrophosphokinase (TPK) (Thiamine diphospho kinase); TIGRFAM: thiamine pyrophosphokinase; SMART: Thiamin pyrophosphokinase vitamin B1-binding region; PFAM: Thiamin pyrophosphokinase catalytic domain-containing protein, Thiamin pyrophosphokinase vitamin B1-binding region.


ensembl_gene_id: JWYL7_0685
symbol: rpmB
gene_biotype: protein_coding
description:
  HAMAP : 50S ribosomal protein L28; KEGG: rpmB, 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.


ensembl_gene_id: JWYL7_0688
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: JWYL7_0689
symbol: JWYL7_0689
gene_biotype: protein_coding
description:
  Methyltransferase; PFAM: Conserved hypothetical protein CHP00095; KEGG: hypothetical protein; TIGRFAM: methyltransferase.


ensembl_gene_id: JWYL7_0690
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: JWYL7_0693
symbol: tmcAL
gene_biotype: protein_coding
description:
  UPF0348 protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.


ensembl_gene_id: JWYL7_0694
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: JWYL7_0696
symbol: rpmF
gene_biotype: protein_coding
description:
  TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: rpmF, 50S ribosomal protein L32; HAMAP : 50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.


ensembl_gene_id: JWYL7_0697
symbol: JWYL7_0697
gene_biotype: protein_coding
description:
  Regulatory protein DeoR; KEGG: fatty acid biosynthesis transcriptional regulator; PFAM: regulatory protein DeoR.


ensembl_gene_id: JWYL7_0698
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: JWYL7_0699
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) synthase 3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: JWYL7_0700
symbol: JWYL7_0700
gene_biotype: protein_coding
description:
  KEGG: trans-2-enoyl-ACP reductase; TIGRFAM: enoyl-(acyl-carrier-protein) reductase II; PFAM: 2-nitropropane dioxygenase NPD.


ensembl_gene_id: JWYL7_0701
symbol: JWYL7_0701
gene_biotype: protein_coding
description:
  Malonyl CoA-acyl carrier protein transacylase; SMART: Polyketide synthase, acyl transferase domain-containing protein; PFAM: Acyl transferase; KEGG: malonyl CoA-acyl carrier protein transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase.


ensembl_gene_id: JWYL7_0702
symbol: JWYL7_0702
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: JWYL7_0704
symbol: JWYL7_0704
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl-carrier-protein) synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: JWYL7_0705
symbol: JWYL7_0705
gene_biotype: protein_coding
description:
  SMART: AAA ATPase; KEGG: spoIIIAA, stage III sporulation protein AA; TIGRFAM: stage III sporulation protein AA.


ensembl_gene_id: JWYL7_0707
symbol: JWYL7_0707
gene_biotype: protein_coding
description:
  PFAM: Stage III sporulation protein AC/AD family; TIGRFAM: stage III sporulation protein AC; KEGG: stage III sporulation AC family protein.


ensembl_gene_id: JWYL7_0708
symbol: JWYL7_0708
gene_biotype: protein_coding
description:
  PFAM: Stage III sporulation protein AC/AD family; KEGG: stage III sporulation protein AD; TIGRFAM: stage III sporulation protein AD.


ensembl_gene_id: JWYL7_0709
symbol: JWYL7_0709
gene_biotype: protein_coding
description:
  PFAM: Sporulation stage III protein AE; TIGRFAM: stage III sporulation protein AE; KEGG: spoIIIAE, stage III sporulation protein AE.


ensembl_gene_id: JWYL7_0715
symbol: nusB
gene_biotype: protein_coding
description:
  NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: JWYL7_0716
symbol: JWYL7_0716
gene_biotype: protein_coding
description:
  Peptidase M22 glycoprotease; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: JWYL7_0717
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease 7 large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: JWYL7_0718
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease 7 small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: JWYL7_0719
symbol: JWYL7_0719
gene_biotype: protein_coding
description:
  Polyprenyl synthetase; KEGG: geranyltranstransferase; PFAM: Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: JWYL7_0720
symbol: JWYL7_0720
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; PFAM: acid phosphatase/vanadium-dependent haloperoxidase related protein.


ensembl_gene_id: JWYL7_0721
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: JWYL7_0722
symbol: JWYL7_0722
gene_biotype: protein_coding
description:
  PFAM: ribosomal RNA methyltransferase RrmJ/FtsJ, RNA-binding S4 domain protein; KEGG: RNA-binding S4-domain-containing protein; TIGRFAM: hemolysin A; SMART: RNA-binding S4 domain protein.


ensembl_gene_id: JWYL7_0725
symbol: JWYL7_0725
gene_biotype: protein_coding
description:
  TIGRFAM: stage IV sporulation protein B; PFAM: peptidase S55 SpoIVB, PDZ/DHR/GLGF domain protein; KEGG: peptidase S55, sporulation stage IV, protein B.


ensembl_gene_id: JWYL7_0726
symbol: JWYL7_0726
gene_biotype: protein_coding
description:
  Sporulation transcriptional activator Spo0A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.


ensembl_gene_id: JWYL7_0728
symbol: JWYL7_0728
gene_biotype: protein_coding
description:
  KEGG: pyrophosphokinase; PFAM: Thiamine pyrophosphokinase domain-containing protein, Thiamin pyrophosphokinase catalytic domain-containing protein.


ensembl_gene_id: JWYL7_0733
symbol: JWYL7_0733
gene_biotype: protein_coding
description:
  NUDIX hydrolase; KEGG: nudF, ADP-ribose pyrophosphatase NudF; PFAM: NUDIX hydrolase; Belongs to the Nudix hydrolase family.


ensembl_gene_id: JWYL7_0735
symbol: JWYL7_0735
gene_biotype: protein_coding
description:
  KEGG: tyrosine recombinase; HAMAP : Tyrosine recombinase xerC; PFAM: integrase family protein, integrase domain protein SAM domain protein; Belongs to the 'phage' integrase family.


ensembl_gene_id: JWYL7_0736
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: JWYL7_0737
symbol: JWYL7_0737
gene_biotype: protein_coding
description:
  Purine nucleoside phosphorylase I, inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: JWYL7_0739
symbol: JWYL7_0739
gene_biotype: protein_coding
description:
  TIGRFAM: pyrimidine-nucleoside phosphorylase; KEGG: pdp, pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3, Glycosyl transferase, family 3, Pyrimidine nucleoside phosphorylase domain-containing protein; SMART: Pyrimidine nucleoside phosphorylase domain-containing protein.


ensembl_gene_id: JWYL7_0740
symbol: mltG
gene_biotype: protein_coding
description:
  Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: JWYL7_0743
symbol: udk
gene_biotype: protein_coding
description:
  HAMAP : Uridine kinase; KEGG: udk, uridine/cytidine kinase; TIGRFAM: uridine kinase; PFAM: phosphoribulokinase/uridine kinase.


ensembl_gene_id: JWYL7_0744
symbol: JWYL7_0744
gene_biotype: protein_coding
description:
  Peptidoglycan glycosyltransferase; KEGG: putative penicillin-binding protein; PFAM: penicillin-binding protein transpeptidase, Penicillin-binding protein dimerization domain-containing protein.


ensembl_gene_id: JWYL7_0745
symbol: JWYL7_0745
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 28 subunit, SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: JWYL7_0746
symbol: JWYL7_0746
gene_biotype: protein_coding
description:
  PFAM: cell wall hydrolase/autolysin; KEGG: N-acetylmuramoyl-L-alanine amidase; SMART: cell wall hydrolase/autolysin.


ensembl_gene_id: JWYL7_0747
symbol: JWYL7_0747
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; PFAM: Protein of unknown function DUF2229, CoA enzyme activase, 2-hydroxyglutaryl-CoA dehydratase D-component; overlaps another CDS with the same product name.


ensembl_gene_id: JWYL7_0748
symbol: JWYL7_0748
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function DUF2229, CoA enzyme activase; KEGG: hypothetical protein; overlaps another CDS with the same product name.


ensembl_gene_id: JWYL7_0750
symbol: JWYL7_0750
gene_biotype: protein_coding
description:
  PFAM: ATPase BadF/BadG/BcrA/BcrD type; KEGG: CoA-substrate-specific enzyme activase; TIGRFAM: CoA-substrate-specific enzyme activase.


ensembl_gene_id: JWYL7_0752
symbol: JWYL7_0752
gene_biotype: protein_coding
description:
  HAMAP : UPF0365 protein; KEGG: hypothetical protein; PFAM: Uncharacterized protein family YdfA-immunity.


ensembl_gene_id: JWYL7_0754
symbol: JWYL7_0754
gene_biotype: protein_coding
description:
  KEGG: desulfoferrodoxin ferrous iron-binding region; PFAM: Desulfoferrodoxin ferrous iron-binding region; TIGRFAM: Desulfoferrodoxin ferrous iron-binding region.


ensembl_gene_id: JWYL7_0757
symbol: JWYL7_0757
gene_biotype: protein_coding
description:
  PFAM: stage IV sporulation YqfD; KEGG: putative stage IV sporulation protein; TIGRFAM: sporulation protein YqfD.


ensembl_gene_id: JWYL7_0759
symbol: JWYL7_0759
gene_biotype: protein_coding
description:
  PFAM: metal-dependent phosphohydrolase 7TM extracellular region, metal-dependent phosphohydrolase HD sub domain-containing protein, metal-dependent phosphohydrolase 7TM intracellular region; TIGRFAM: metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region; KEGG: metal dependent phosphohydrolase.


ensembl_gene_id: JWYL7_0760
symbol: ybeY
gene_biotype: protein_coding
description:
  Metalloprotease ybeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: JWYL7_0761
symbol: JWYL7_0761
gene_biotype: protein_coding
description:
  Diacylglycerol kinase; SMART: phosphoesterase PA-phosphatase related protein; KEGG: diacylglycerol kinase; PFAM: diacylglycerol kinase, phosphoesterase PA-phosphatase related protein.


ensembl_gene_id: JWYL7_0763
symbol: JWYL7_0763
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: JWYL7_0764
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era-like-protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: JWYL7_0768
symbol: glyQ
gene_biotype: protein_coding
description:
  TIGRFAM: glycyl-tRNA synthetase, alpha subunit; KEGG: glyQ, glycine tRNA synthetase subunit alpha; HAMAP : Glycyl-tRNA synthetase alpha subunit; PFAM: glycyl-tRNA synthetase alpha subunit.


ensembl_gene_id: JWYL7_0769
symbol: glyS
gene_biotype: protein_coding
description:
  HAMAP : Glycyl-tRNA synthetase beta subunit; TIGRFAM: glycyl-tRNA synthetase, beta subunit; KEGG: glyS, glycyl-tRNA synthetase subunit beta.


ensembl_gene_id: JWYL7_0770
symbol: JWYL7_0770
gene_biotype: protein_coding
description:
  Transcriptional regulator, CBS sensor domains and BirA family winged HTH; PFAM: CBS domain containing protein; KEGG: hypothetical protein.


ensembl_gene_id: JWYL7_0771
symbol: JWYL7_0771
gene_biotype: protein_coding
description:
  Putative pyruvate, phosphate dikinase regulatory protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: JWYL7_0772
symbol: JWYL7_0772
gene_biotype: protein_coding
description:
  PFAM: PEP-utilizing protein, pyruvate phosphate dikinase PEP/pyruvate-binding protein, PEP-utilising protein mobile region; TIGRFAM: pyruvate, phosphate dikinase; KEGG: ppdK, pyruvate, phosphate dikinase.


ensembl_gene_id: JWYL7_0773
symbol: JWYL7_0773
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF964; KEGG: hypothetical protein; Belongs to the UPF0342 family.


ensembl_gene_id: JWYL7_0777
symbol: JWYL7_0777
gene_biotype: protein_coding
description:
  KEGG: nucleoside recognition domain-containing protein; PFAM: nucleoside recognition domain protein.


ensembl_gene_id: JWYL7_0780
symbol: JWYL7_0780
gene_biotype: protein_coding
description:
  PFAM: Cold-shock protein DNA-binding protein; KEGG: major cold shock protein; SMART: Cold shock protein.


ensembl_gene_id: JWYL7_0782
symbol: JWYL7_0782
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, periplasmic subunit family 3; KEGG: polar amino acid uptake ABC transporter amino acid-binding protein; SMART: ABC-type transporter, periplasmic subunit family 3, ionotropic glutamate receptor; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: JWYL7_0783
symbol: JWYL7_0783
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; KEGG: polar amino acid ABC transporter inner membrane subunit.


ensembl_gene_id: JWYL7_0784
symbol: JWYL7_0784
gene_biotype: protein_coding
description:
  SMART: AAA ATPase; KEGG: artM, arginine ABC transporter ATP-binding protein ArtM; PFAM: ABC transporter related protein.


ensembl_gene_id: JWYL7_0787
symbol: JWYL7_0787
gene_biotype: protein_coding
description:
  Serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1, Penicillin-binding protein 5 domain protein; KEGG: D-alanyl-D-alanine carboxypeptidase; SMART: Penicillin-binding protein 5 domain protein; Belongs to the peptidase S11 family.


ensembl_gene_id: JWYL7_0790
symbol: JWYL7_0790
gene_biotype: protein_coding
description:
  SMART: regulatory protein LacI; KEGG: rbsR, DNA-binding transcriptional repressor of ribose metabolism; PFAM: periplasmic binding protein/LacI transcriptional regulator, regulatory protein LacI.


ensembl_gene_id: JWYL7_0791
symbol: rbsK
gene_biotype: protein_coding
description:
  Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: JWYL7_0793
symbol: rbsA
gene_biotype: protein_coding
description:
  Monosaccharide-transporting ATPase; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.


ensembl_gene_id: JWYL7_0794
symbol: JWYL7_0794
gene_biotype: protein_coding
description:
  KEGG: ribose ABC transporter membrane protein; PFAM: ABC-type transporter, integral membrane subunit; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: JWYL7_0803
symbol: JWYL7_0803
gene_biotype: protein_coding
description:
  PFAM: Radical SAM domain protein; TIGRFAM: Conserved hypothetical protein CHP01212; SMART: Elongator protein 3/MiaB/NifB; KEGG: radical SAM domain-containing protein.


ensembl_gene_id: JWYL7_0804
symbol: JWYL7_0804
gene_biotype: protein_coding
description:
  PFAM: metal-dependent phosphohydrolase HD sub domain-containing protein; KEGG: hypothetical protein; TIGRFAM: metal dependent phosphohydrolase.


ensembl_gene_id: JWYL7_0807
symbol: JWYL7_0807
gene_biotype: protein_coding
description:
  TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: Glutamine amidotransferase type 1; KEGG: pabA, para-aminobenzoate/anthranilate synthase glutamine amidotransferase component II.


ensembl_gene_id: JWYL7_0808
symbol: JWYL7_0808
gene_biotype: protein_coding
description:
  TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding domain-containing protein, Anthranilate synthase component I domain protein; KEGG: pabB, Para-aminobenzoate synthase component I.


ensembl_gene_id: JWYL7_0811
symbol: folE
gene_biotype: protein_coding
description:
  PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; HAMAP : GTP cyclohydrolase 1; KEGG: mtrA, GTP cyclohydrolase i; TIGRFAM: GTP cyclohydrolase I.


ensembl_gene_id: JWYL7_0812
symbol: JWYL7_0812
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: JWYL7_0813
symbol: JWYL7_0813
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: JWYL7_0814
symbol: JWYL7_0814
gene_biotype: protein_coding
description:
  KEGG: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK; TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase.


ensembl_gene_id: JWYL7_0815
symbol: JWYL7_0815
gene_biotype: protein_coding
description:
  TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA; KEGG: phospho-2-dehydro-3-deoxyheptonate aldolase/chorismate mutase.


ensembl_gene_id: JWYL7_0816
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: JWYL7_0817
symbol: sigA
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: JWYL7_0820
symbol: JWYL7_0820
gene_biotype: protein_coding
description:
  PFAM: NGG1p interacting factor 3 protein, NIF3; TIGRFAM: NGG1p interacting factor 3 protein, NIF3; KEGG: hypothetical protein; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.


ensembl_gene_id: JWYL7_0821
symbol: JWYL7_0821
gene_biotype: protein_coding
description:
  KEGG: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain-containing protein.


ensembl_gene_id: JWYL7_0822
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan-branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: JWYL7_0823
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: JWYL7_0824
symbol: JWYL7_0824
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase, GlgD subunit; KEGG: glgD, glycogen biosynthesis protein glgd; PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit.


ensembl_gene_id: JWYL7_0826
symbol: JWYL7_0826
gene_biotype: protein_coding
description:
  Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: JWYL7_0827
symbol: JWYL7_0827
gene_biotype: protein_coding
description:
  Pullulanase, type I; SMART: alpha amylase catalytic sub domain-containing protein; TIGRFAM: pullulanase, type I; KEGG: pullulanase; PFAM: glycoside hydrolase family 13 domain protein, alpha amylase catalytic region; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: JWYL7_0829
symbol: JWYL7_0829
gene_biotype: protein_coding
description:
  UPF0145 protein ybjQ; PFAM: protein of unknown function DUF74; KEGG: hypothetical protein; HAMAP : UPF0145 protein ybjQ; Belongs to the UPF0145 family.


ensembl_gene_id: JWYL7_0830
symbol: JWYL7_0830
gene_biotype: protein_coding
description:
  KEGG: single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein, phosphoesterase DHHA1.


ensembl_gene_id: JWYL7_0831
symbol: JWYL7_0831
gene_biotype: protein_coding
description:
  PFAM: Domain of unknown function DUF3298-containing protein, KWG Leptospira repeat protein; KEGG: hypothetical protein.


ensembl_gene_id: JWYL7_0834
symbol: JWYL7_0834
gene_biotype: protein_coding
description:
  SMART: metal-dependent phosphohydrolase HD region; PFAM: metal-dependent phosphohydrolase HD sub domain-containing protein; KEGG: metal dependent phosphohydrolase.


ensembl_gene_id: JWYL7_0836
symbol: JWYL7_0836
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: JWYL7_0837
symbol: JWYL7_0837
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgC; PFAM: protein of unknown function DUF1078 domain protein, flagellar basal body rod protein; KEGG: flagellar basal-body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: JWYL7_0838
symbol: fliE
gene_biotype: protein_coding
description:
  HAMAP : Flagellar hook-basal body complex protein fliE; PFAM: flagellar hook-basal body complex protein FliE; TIGRFAM: flagellar hook-basal body complex subunit FliE; KEGG: fliE, flagellar hook-basal body complex protein FliE.


ensembl_gene_id: JWYL7_0839
symbol: JWYL7_0839
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: JWYL7_0840
symbol: JWYL7_0840
gene_biotype: protein_coding
description:
  TIGRFAM: flagellar motor switch protein FliG; KEGG: fliG, flagellar motor switching and energizing component; PFAM: Flagellar motor switch protein FliG, C-terminal.


ensembl_gene_id: JWYL7_0842
symbol: JWYL7_0842
gene_biotype: protein_coding
description:
  ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region, H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase; TIGRFAM: ATPase, FliI/YscN family, type III secretion apparatus H+-transporting two-sector ATPase, flagellar protein export ATPase FliI; KEGG: fliI, flagellum-specific ATP synthase.


ensembl_gene_id: JWYL7_0847
symbol: JWYL7_0847
gene_biotype: protein_coding
description:
  Flagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein, flagellar basal body FlaE domain protein, flagellar basal body rod protein; TIGRFAM: flagellar hook-basal body protein; KEGG: hypothetical protein.


ensembl_gene_id: JWYL7_0850
symbol: JWYL7_0850
gene_biotype: protein_coding
description:
  KEGG: motB, motility protein b; PFAM: OmpA/MotB domain protein, Motility protein B, N-terminal domain.


ensembl_gene_id: JWYL7_0851
symbol: JWYL7_0851
gene_biotype: protein_coding
description:
  Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: JWYL7_0852
symbol: JWYL7_0852
gene_biotype: protein_coding
description:
  PFAM: flagellar motor switch protein FliM, surface presentation of antigens (SPOA) protein; TIGRFAM: flagellar motor switch protein FliM; KEGG: fliM, flim.


ensembl_gene_id: JWYL7_0853
symbol: JWYL7_0853
gene_biotype: protein_coding
description:
  CheC, phosphatase, inhibitor of MCP methylation; PFAM: surface presentation of antigens (SPOA) protein, CheC domain protein; KEGG: fliY, flagellar motor switching and energizing phosphatase; TIGRFAM: flagellar motor switch protein FliN.


ensembl_gene_id: JWYL7_0854
symbol: JWYL7_0854
gene_biotype: protein_coding
description:
  SMART: response regulator receiver; PFAM: response regulator receiver; KEGG: response regulator receiver protein.


ensembl_gene_id: JWYL7_0856
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: JWYL7_0857
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: JWYL7_0858
symbol: JWYL7_0858
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: JWYL7_0859
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: JWYL7_0860
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: JWYL7_0861
symbol: JWYL7_0861
gene_biotype: protein_coding
description:
  KEGG: flhF, flagella-associated protein; SMART: GTP-binding signal recognition particle SRP54 G- domain-containing protein, AAA ATPase; TIGRFAM: flagellar biosynthetic protein FlhF; PFAM: GTP-binding signal recognition particle SRP54 G- domain-containing protein.


ensembl_gene_id: JWYL7_0862
symbol: JWYL7_0862
gene_biotype: protein_coding
description:
  PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ylxH, essential component of the flagellar assembly machinery.


ensembl_gene_id: JWYL7_0864
symbol: cheB
gene_biotype: protein_coding
description:
  Response regulator receiver modulated CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: JWYL7_0865
symbol: JWYL7_0865
gene_biotype: protein_coding
description:
  CheA signal transduction histidine kinase; SMART: CheW domain protein, Hpt domain protein, ATP-binding region ATPase domain protein; PFAM: CheW domain protein, P2 response regulator binding domain protein, Hpt domain protein, ATP-binding region ATPase domain protein, Signal transducing histidine kinase homodimeric; KEGG: cheA, chemotactic sensory histidine kinase in two-component regulatory system with CheB and CheY.


ensembl_gene_id: JWYL7_0866
symbol: JWYL7_0866
gene_biotype: protein_coding
description:
  KEGG: cheW, purine-binding chemotaxis protein; PFAM: CheW domain protein; SMART: CheW domain protein.


ensembl_gene_id: JWYL7_0867
symbol: JWYL7_0867
gene_biotype: protein_coding
description:
  CheC, phosphatase, inhibitor of MCP methylation; PFAM: CheC domain protein; KEGG: cheC, chemotaxis protein CheC.


ensembl_gene_id: JWYL7_0868
symbol: cheD
gene_biotype: protein_coding
description:
  CheD, deamidase, stimulates methylation of MCP protein; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: JWYL7_0870
symbol: JWYL7_0870
gene_biotype: protein_coding
description:
  KEGG: sigD, RNA polymerase sigma-28 factor (sigma-d); TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family, RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein, sigma-70 region 3 domain protein, sigma-70 region 2 domain protein.


ensembl_gene_id: JWYL7_0874
symbol: rpsB
gene_biotype: protein_coding
description:
  HAMAP : ribosomal protein S2; KEGG: rpsB, 30S ribosomal protein S2; PFAM: ribosomal protein S2; TIGRFAM: ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.


ensembl_gene_id: JWYL7_0875
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: JWYL7_0877
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: JWYL7_0879
symbol: JWYL7_0879
gene_biotype: protein_coding
description:
  Undecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: JWYL7_0880
symbol: JWYL7_0880
gene_biotype: protein_coding
description:
  PFAM: phosphatidate cytidylyltransferase; KEGG: phosphatidate cytidylyltransferase; Belongs to the CDS family.


ensembl_gene_id: JWYL7_0881
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: JWYL7_0882
symbol: JWYL7_0882
gene_biotype: protein_coding
description:
  SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: membrane-associated zinc metalloprotease; KEGG: putative membrane-associated zinc metalloprotease; PFAM: peptidase M50, PDZ/DHR/GLGF domain protein.


ensembl_gene_id: JWYL7_0883
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: JWYL7_0884
symbol: polC
gene_biotype: protein_coding
description:
  DNA polymerase III polC-type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: JWYL7_0885
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor rimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: JWYL7_0889
symbol: infB
gene_biotype: protein_coding
description:
  Initiation factor 2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: JWYL7_0890
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: JWYL7_0891
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: JWYL7_0892
symbol: JWYL7_0892
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibF; PFAM: FAD synthetase, Riboflavin kinase; SMART: Riboflavin kinase; TIGRFAM: riboflavin biosynthesis protein RibF, cytidyltransferase-related domain protein; KEGG: bifunctional riboflavin kinase/fmn adenylyltransferase; Belongs to the ribF family.


ensembl_gene_id: JWYL7_0893
symbol: rpsO
gene_biotype: protein_coding
description:
  Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: JWYL7_0894
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: JWYL7_0896
symbol: JWYL7_0896
gene_biotype: protein_coding
description:
  TIGRFAM: sporulation protein, YlmC/YmxH family; KEGG: hypothetical protein; PFAM: PRC-barrel domain protein.


ensembl_gene_id: JWYL7_0897
symbol: JWYL7_0897
gene_biotype: protein_coding
description:
  PFAM: aspartate/glutamate/uridylate kinase; KEGG: dapG, aspartate kinase I; TIGRFAM: aspartate kinase; Belongs to the aspartokinase family.


ensembl_gene_id: JWYL7_0899
symbol: JWYL7_0899
gene_biotype: protein_coding
description:
  KEGG: DNA translocase; PFAM: cell division FtsK/SpoIIIE, DNA translocase ftsK gamma; SMART: DNA translocase ftsK gamma, AAA ATPase; Belongs to the FtsK/SpoIIIE/SftA family.


ensembl_gene_id: JWYL7_0900
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase rimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: JWYL7_0901
symbol: JWYL7_0901
gene_biotype: protein_coding
description:
  TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: PgsA2, phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: JWYL7_0902
symbol: recA
gene_biotype: protein_coding
description:
  Protein recA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: JWYL7_0903
symbol: rny
gene_biotype: protein_coding
description:
  2,3 cyclic-nucleotide 2-phosphodiesterase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.


ensembl_gene_id: JWYL7_0904
symbol: JWYL7_0904
gene_biotype: protein_coding
description:
  PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein; KEGG: transposase IS204/IS1001/IS1096/IS1165 family protein.


ensembl_gene_id: JWYL7_0910
symbol: JWYL7_0910
gene_biotype: protein_coding
description:
  ApbE family lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: JWYL7_0911
symbol: JWYL7_0911
gene_biotype: protein_coding
description:
  Integrase family protein; KEGG: tyrosine recombinase; PFAM: integrase family protein; Belongs to the 'phage' integrase family.


ensembl_gene_id: JWYL7_0912
symbol: JWYL7_0912
gene_biotype: protein_coding
description:
  Aspartate transaminase; PFAM: aminotransferase class I and II; KEGG: class I and II aminotransferase.


ensembl_gene_id: JWYL7_0913
symbol: JWYL7_0913
gene_biotype: protein_coding
description:
  SMART: Adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; KEGG: adenylosuccinate lyase; PFAM: Lyase 1, N-terminal, Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: JWYL7_0916
symbol: lexA
gene_biotype: protein_coding
description:
  SOS-response transcriptional repressor, LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: JWYL7_0918
symbol: JWYL7_0918
gene_biotype: protein_coding
description:
  Integrase family protein; KEGG: site-specific integrase/recombinase; PFAM: integrase family protein; Belongs to the 'phage' integrase family.


ensembl_gene_id: JWYL7_0919
symbol: hfq
gene_biotype: protein_coding
description:
  Protein hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: JWYL7_0920
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: JWYL7_0921
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein mutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: JWYL7_0922
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein mutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: JWYL7_0923
symbol: miaB
gene_biotype: protein_coding
description:
  (Dimethylallyl)adenosine tRNA methylthiotransferase miaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: JWYL7_0925
symbol: JWYL7_0925
gene_biotype: protein_coding
description:
  Sporulation protein YyaC; PFAM: protein of unknown function DUF1256; TIGRFAM: sporulation protein YyaC; KEGG: hypothetical protein.


ensembl_gene_id: JWYL7_0926
symbol: JWYL7_0926
gene_biotype: protein_coding
description:
  rRNA (guanine-N(2)-)-methyltransferase; KEGG: methylase; SMART: THUMP domain-containing protein; PFAM: RNA methylase; Belongs to the methyltransferase superfamily.


ensembl_gene_id: JWYL7_0929
symbol: JWYL7_0929
gene_biotype: protein_coding
description:
  N-6 DNA methylase; KEGG: N6 adenine-specific DNA methyltransferase, N12 class; PFAM: N-6 DNA methylase, TaqI-like C-terminal specificity domain.


ensembl_gene_id: JWYL7_0931
symbol: JWYL7_0931
gene_biotype: protein_coding
description:
  UPF0313 protein ygiQ; SMART: Elongator protein 3/MiaB/NifB; KEGG: radical SAM domain protein; PFAM: Radical SAM domain protein, Uncharacterized protein family UPF0313, C-terminal, Radical SAM domain protein; TIGRFAM: Uncharacterized protein family UPF0313; HAMAP : UPF0313 protein ygiQ.


ensembl_gene_id: JWYL7_0933
symbol: JWYL7_0933
gene_biotype: protein_coding
description:
  PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: NADH dehydrogenase (ubiquinone) 24 kDa subunit.


ensembl_gene_id: JWYL7_0934
symbol: JWYL7_0934
gene_biotype: protein_coding
description:
  PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit, Soluble ligand binding domain-containing protein, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein, NADH dehydrogenase (ubiquinone) 24 kDa subunit, NADH ubiquinone oxidoreductase, F subunit, iron sulfur binding protein; SMART: NADH ubiquinone oxidoreductase, F subunit, iron sulfur binding protein; KEGG: NADH dehydrogenase (quinone).


ensembl_gene_id: JWYL7_0935
symbol: JWYL7_0935
gene_biotype: protein_coding
description:
  TIGRFAM: hydrogenase, Fe-only; KEGG: hydrogenase subunit; PFAM: hydrogenase large subunit domain protein, NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein, iron hydrogenase small subunit; SMART: iron hydrogenase small subunit, NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein.


ensembl_gene_id: JWYL7_0936
symbol: JWYL7_0936
gene_biotype: protein_coding
description:
  PFAM: C_GCAxxG_C_C family protein; TIGRFAM: C_GCAxxG_C_C family protein; KEGG: hypothetical protein.


ensembl_gene_id: JWYL7_0937
symbol: asnS
gene_biotype: protein_coding
description:
  PFAM: tRNA synthetase class II (D K and N), nucleic acid binding OB-fold tRNA/helicase-type; HAMAP : Asparaginyl-tRNA synthetase; TIGRFAM: asparaginyl-tRNA synthetase; KEGG: asnC, asparaginyl-tRNA synthetase.


ensembl_gene_id: JWYL7_0940
symbol: JWYL7_0940
gene_biotype: protein_coding
description:
  KEGG: 3-mercaptopyruvate sulfurtransferase; SMART: Rhodanese-like protein; PFAM: Rhodanese-like protein.


ensembl_gene_id: JWYL7_0945
symbol: accA
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: JWYL7_0946
symbol: accD
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: JWYL7_0947
symbol: JWYL7_0947
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: JWYL7_0948
symbol: JWYL7_0948
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: JWYL7_0949
symbol: JWYL7_0949
gene_biotype: protein_coding
description:
  SMART: MCP methyltransferase CheR-type; KEGG: cheR, chemotaxis protein CheR; PFAM: MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal, MCP methyltransferase, CheR-type, all-alpha domain, N-terminal.


ensembl_gene_id: JWYL7_0950
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: JWYL7_0951
symbol: JWYL7_0951
gene_biotype: protein_coding
description:
  PFAM: phospholipid/glycerol acyltransferase; KEGG: 1-acyl-sn-glycerol-3-phosphate acyltransferase; SMART: phospholipid/glycerol acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: JWYL7_0952
symbol: cmk
gene_biotype: protein_coding
description:
  KEGG: cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region, adenylate kinase; HAMAP : Cytidylate kinase.


ensembl_gene_id: JWYL7_0953
symbol: JWYL7_0953
gene_biotype: protein_coding
description:
  Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.


ensembl_gene_id: JWYL7_0954
symbol: JWYL7_0954
gene_biotype: protein_coding
description:
  KEGG: phosphoglycerate mutase; PFAM: Phosphoglycerate mutase; SMART: Phosphoglycerate mutase; Belongs to the phosphoglycerate mutase family.


ensembl_gene_id: JWYL7_0955
symbol: JWYL7_0955
gene_biotype: protein_coding
description:
  Transcriptional regulator, RpiR family; PFAM: sugar isomerase (SIS), helix-turn-helix protein RpiR; KEGG: rpir family transcriptional regulator.


ensembl_gene_id: JWYL7_0956
symbol: JWYL7_0956
gene_biotype: protein_coding
description:
  2-oxoglutarate synthase; PFAM: Pyruvate/ketoisovalerate oxidoreductase; KEGG: korC, 2-oxoglutarate synthase subunit KorC.


ensembl_gene_id: JWYL7_0957
symbol: JWYL7_0957
gene_biotype: protein_coding
description:
  KEGG: korB, 2-oxoglutarate synthase subunit KorB; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; overlaps another CDS with the same product name.


ensembl_gene_id: JWYL7_0958
symbol: JWYL7_0958
gene_biotype: protein_coding
description:
  2-oxoglutarate synthase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: korA, 2-oxoglutarate synthase subunit KorA; overlaps another CDS with the same product name.


ensembl_gene_id: JWYL7_0960
symbol: surE
gene_biotype: protein_coding
description:
  Survival protein SurE-like phosphatase/nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: JWYL7_0961
symbol: JWYL7_0961
gene_biotype: protein_coding
description:
  KEGG: oxaloacetate decarboxylase; PFAM: carboxylase region-containing protein, pyruvate carboxyltransferase.


ensembl_gene_id: JWYL7_0963
symbol: JWYL7_0963
gene_biotype: protein_coding
description:
  PFAM: pseudouridine synthase, RNA-binding S4 domain protein; KEGG: pseudouridine synthase family protein; SMART: RNA-binding S4 domain protein; TIGRFAM: pseudouridine synthase Rsu; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: JWYL7_0966
symbol: JWYL7_0966
gene_biotype: protein_coding
description:
  TIGRFAM: integral membrane protein TIGR01906; KEGG: hypothetical protein; PFAM: Integral membrane protein 1906.


ensembl_gene_id: JWYL7_0967
symbol: JWYL7_0967
gene_biotype: protein_coding
description:
  KEGG: copper-translocating P-type ATPase; PFAM: E1-E2 ATPase-associated domain protein, Heavy metal transport/detoxification protein, Haloacid dehalogenase domain protein hydrolase; TIGRFAM: heavy metal translocating P-type ATPase, copper-translocating P-type ATPase, ATPase, P-type (transporting), HAD superfamily, subfamily IC, copper ion binding protein.


ensembl_gene_id: JWYL7_0969
symbol: JWYL7_0969
gene_biotype: protein_coding
description:
  KEGG: sspB, small acid-soluble spore protein B; PFAM: small acid-soluble spore protein alpha/beta type.


ensembl_gene_id: JWYL7_0974
symbol: JWYL7_0974
gene_biotype: protein_coding
description:
  KEGG: PTS system, sucrose-specific IIBC component; PFAM: phosphotransferase system EIIC, Phosphotransferase system EIIB/cysteine, phosphorylation site; TIGRFAM: PTS system, sucrose-specific IIBC subunit, PTS system, glucose-like IIB subunint.


ensembl_gene_id: JWYL7_0975
symbol: ung
gene_biotype: protein_coding
description:
  Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: JWYL7_0980
symbol: JWYL7_0980
gene_biotype: protein_coding
description:
  KEGG: exoA, exodeoxyribonuclease III; TIGRFAM: exodeoxyribonuclease III Xth, exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase.


ensembl_gene_id: JWYL7_0984
symbol: JWYL7_0984
gene_biotype: protein_coding
description:
  PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain; KEGG: thioredoxin reductase.


ensembl_gene_id: JWYL7_0985
symbol: JWYL7_0985
gene_biotype: protein_coding
description:
  PFAM: Thioredoxin domain-containing protein; TIGRFAM: thioredoxin; KEGG: thioredoxin; Belongs to the thioredoxin family.


ensembl_gene_id: JWYL7_0990
symbol: JWYL7_0990
gene_biotype: protein_coding
description:
  SMART: helix-turn-helix domain protein; KEGG: XRE family transcriptional regulator; PFAM: Cupin 2 conserved barrel domain protein.


ensembl_gene_id: JWYL7_0991
symbol: speH
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.


ensembl_gene_id: JWYL7_0992
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: JWYL7_0993
symbol: JWYL7_0993
gene_biotype: protein_coding
description:
  Agmatinase; KEGG: putative agmatinase; TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; Belongs to the arginase family.


ensembl_gene_id: JWYL7_0994
symbol: scpB
gene_biotype: protein_coding
description:
  Chromosome segregation and condensation protein, ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: JWYL7_0995
symbol: scpA
gene_biotype: protein_coding
description:
  Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: JWYL7_0998
symbol: JWYL7_0998
gene_biotype: protein_coding
description:
  3-mercaptopyruvate sulfurtransferase; PFAM: Rhodanese-like protein; KEGG: Rhodanese domain-containing protein; SMART: Rhodanese-like protein.


ensembl_gene_id: JWYL7_0999
symbol: JWYL7_0999
gene_biotype: protein_coding
description:
  KEGG: LysR family transcriptional regulator; PFAM: LysR substrate-binding protein, regulatory protein LysR.


ensembl_gene_id: JWYL7_1002
symbol: JWYL7_1002
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; TIGRFAM: Protein of unknown function DUF2064; PFAM: Protein of unknown function DUF2064.


ensembl_gene_id: JWYL7_1003
symbol: JWYL7_1003
gene_biotype: protein_coding
description:
  TIGRFAM: Transferase 2, rSAM/selenodomain-associated; KEGG: group 2 family glycosyl transferase protein; PFAM: glycosyl transferase family 2.


ensembl_gene_id: JWYL7_1004
symbol: JWYL7_1004
gene_biotype: protein_coding
description:
  SMART: AAA ATPase; KEGG: ABC transporter-like protein; PFAM: ABC transporter related protein; Belongs to the ABC transporter superfamily.


ensembl_gene_id: JWYL7_1005
symbol: JWYL7_1005
gene_biotype: protein_coding
description:
  ABC-type transporter, integral membrane subunit; KEGG: binding-protein-dependent transport system inner membrane protein; PFAM: ABC-type transporter, integral membrane subunit.


ensembl_gene_id: JWYL7_1009
symbol: JWYL7_1009
gene_biotype: protein_coding
description:
  KEGG: SirA family protein; PFAM: SirA-like domain-containing protein; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: JWYL7_1012
symbol: JWYL7_1012
gene_biotype: protein_coding
description:
  Serine-type D-Ala-D-Ala carboxypeptidase; SMART: Penicillin-binding protein 5 domain protein; KEGG: D-alanyl-D-alanine carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1, Penicillin-binding protein 5 domain protein; Belongs to the peptidase S11 family.


ensembl_gene_id: JWYL7_1013
symbol: rnj
gene_biotype: protein_coding
description:
  Ribocuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: JWYL7_1014
symbol: JWYL7_1014
gene_biotype: protein_coding
description:
  KEGG: membrane-bound metal-dependent hydrolase; PFAM: Protein of unknown function DUF457, transmembrane.


ensembl_gene_id: JWYL7_1015
symbol: JWYL7_1015
gene_biotype: protein_coding
description:
  Ferric uptake regulator, Fur family; PFAM: ferric-uptake regulator; KEGG: perR, peroxid-repressor; Belongs to the Fur family.


ensembl_gene_id: JWYL7_1016
symbol: JWYL7_1016
gene_biotype: protein_coding
description:
  HAMAP : UPF0473 protein; KEGG: hypothetical protein; PFAM: protein of unknown function DUF1292; Belongs to the UPF0473 family.


ensembl_gene_id: JWYL7_1017
symbol: JWYL7_1017
gene_biotype: protein_coding
description:
  Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: JWYL7_1018
symbol: JWYL7_1018
gene_biotype: protein_coding
description:
  KEGG: aldo/keto reductase; PFAM: NADP-dependent oxidoreductase domain, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.


ensembl_gene_id: JWYL7_1020
symbol: JWYL7_1020
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; HAMAP : UPF0297 protein; PFAM: protein of unknown function DUF965; Belongs to the UPF0297 family.


ensembl_gene_id: JWYL7_1021
symbol: alaS
gene_biotype: protein_coding
description:
  Alanine-tRNA ligase, eukaryota/bacteria; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: JWYL7_1023
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA-specific 2-thiouridylase mnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: JWYL7_1024
symbol: JWYL7_1024
gene_biotype: protein_coding
description:
  PFAM: nitrogen-fixing NifU domain protein; KEGG: nifU, iron sulfur cluster assembly protein NifU; TIGRFAM: FeS cluster assembly scaffold protein NifU.


ensembl_gene_id: JWYL7_1025
symbol: iscS
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.


ensembl_gene_id: JWYL7_1026
symbol: JWYL7_1026
gene_biotype: protein_coding
description:
  KEGG: iscR, DNA-binding transcriptional repressor; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074.


ensembl_gene_id: JWYL7_1027
symbol: JWYL7_1027
gene_biotype: protein_coding
description:
  Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.


ensembl_gene_id: JWYL7_1032
symbol: JWYL7_1032
gene_biotype: protein_coding
description:
  KEGG: recombination factor protein RarA; PFAM: MgsA AAA+ ATPase domain-containing protein, Holliday junction DNA helicase RuvB domain-containing protein; SMART: AAA ATPase.


ensembl_gene_id: JWYL7_1033
symbol: codY
gene_biotype: protein_coding
description:
  GTP-sensing pleiotropic transcriptional repressor CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family.


ensembl_gene_id: JWYL7_1034
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: JWYL7_1035
symbol: JWYL7_1035
gene_biotype: protein_coding
description:
  DNA protecting protein DprA; PFAM: SMF family protein; KEGG: competence protein; TIGRFAM: DNA protecting protein DprA.


ensembl_gene_id: JWYL7_1039
symbol: selO
gene_biotype: protein_coding
description:
  UPF0061 protein ydiU; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.


ensembl_gene_id: JWYL7_1042
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR associated protein Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: JWYL7_1043
symbol: cas1
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: JWYL7_1044
symbol: JWYL7_1044
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.


ensembl_gene_id: JWYL7_1045
symbol: JWYL7_1045
gene_biotype: protein_coding
description:
  CRISPR-associated helicase Cas3; PFAM: DEAD/DEAH box helicase domain protein; KEGG: hypothetical protein; TIGRFAM: CRISPR-associated helicase Cas3, CRISPR-associated HD domain protein; SMART: DEAD-like helicase.


ensembl_gene_id: JWYL7_1046
symbol: JWYL7_1046
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; TIGRFAM: CRISPR-associated protein Cas5 family, CRISPR-associated protein Cas5; PFAM: CRISPR-associated protein, Cas5.


ensembl_gene_id: JWYL7_1047
symbol: JWYL7_1047
gene_biotype: protein_coding
description:
  CRISPR-associated autoregulator, DevR family; PFAM: CRISPR-associated negative autoregulator; KEGG: hypothetical protein; TIGRFAM: CRISPR-associated regulatory protein, DevR family, CRISPR-associated autoregulator DevR family.


ensembl_gene_id: JWYL7_1048
symbol: JWYL7_1048
gene_biotype: protein_coding
description:
  PFAM: CRISPR-associated protein, CXXC-CXXC region; KEGG: hypothetical protein; TIGRFAM: CRISPR-associated protein CXXC-CXXC region.


ensembl_gene_id: JWYL7_1049
symbol: JWYL7_1049
gene_biotype: protein_coding
description:
  KEGG: CRISPR-associated Cas6 family protein; TIGRFAM: CRISPR-associated protein Cas6; PFAM: CRISPR-associated protein TM1814.


ensembl_gene_id: JWYL7_1052
symbol: JWYL7_1052
gene_biotype: protein_coding
description:
  PFAM: transposase IS66, Transposase TnpC, homeodomain, Transposase IS66, predicted helix-turn-helix domain; KEGG: transposase IS66.


ensembl_gene_id: JWYL7_1064
symbol: JWYL7_1064
gene_biotype: protein_coding
description:
  PFAM: Domain of unknown function DUF2357-containing protein, protein of unknown function DUF524; KEGG: hypothetical protein.


ensembl_gene_id: JWYL7_1069
symbol: JWYL7_1069
gene_biotype: protein_coding
description:
  KEGG: C4-dicarboxylate transporter/malic acid transport protein; PFAM: C4-dicarboxylate transporter/malic acid transport protein.


ensembl_gene_id: JWYL7_1073
symbol: JWYL7_1073
gene_biotype: protein_coding
description:
  Mg chelatase-related protein; KEGG: magnesium chelatase subunit chli; PFAM: Mg chelatase-related protein, C-terminal domain.


ensembl_gene_id: JWYL7_1076
symbol: JWYL7_1076
gene_biotype: protein_coding
description:
  SMART: cell wall hydrolase/autolysin; KEGG: N-acetylmuramoyl-L-alanine amidase; PFAM: cell wall hydrolase/autolysin, Sporulation domain-containing protein.


ensembl_gene_id: JWYL7_1079
symbol: JWYL7_1079
gene_biotype: protein_coding
description:
  Phage minor structural protein; PFAM: protein of unknown function DUF1142, Carbohydrate-binding CenC domain protein; KEGG: hypothetical protein; TIGRFAM: phage minor structural protein.


ensembl_gene_id: JWYL7_1080
symbol: JWYL7_1080
gene_biotype: protein_coding
description:
  PFAM: tail component family protein; TIGRFAM: tail component domain protein; KEGG: phage tail protein.


ensembl_gene_id: JWYL7_1081
symbol: JWYL7_1081
gene_biotype: protein_coding
description:
  KEGG: TP901 family phage tail tape measure protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region-containing protein.


ensembl_gene_id: JWYL7_1084
symbol: JWYL7_1084
gene_biotype: protein_coding
description:
  PFAM: major tail protein TP901-1; KEGG: phage major tail protein, TP901-1 family; TIGRFAM: phage major tail protein, TP901-1 family.


ensembl_gene_id: JWYL7_1086
symbol: JWYL7_1086
gene_biotype: protein_coding
description:
  PFAM: protein HK97 gp10 family protein; TIGRFAM: phage protein, HK97 gp10 family; KEGG: phage protein, HK97 gp10 family.


ensembl_gene_id: JWYL7_1087
symbol: JWYL7_1087
gene_biotype: protein_coding
description:
  Phage head-tail adaptor; PFAM: head-tail joining family protein; TIGRFAM: phage head-tail adaptor; KEGG: phage head-tail adaptor.


ensembl_gene_id: JWYL7_1088
symbol: JWYL7_1088
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; TIGRFAM: uncharacterized phage DNA packaging-like protein; PFAM: Bacteriophage QLRG family DNA packaging.


ensembl_gene_id: JWYL7_1089
symbol: JWYL7_1089
gene_biotype: protein_coding
description:
  KEGG: phage major capsid protein, HK97 family; TIGRFAM: phage major capsid protein, HK97 family; PFAM: Caudovirus, capsid.


ensembl_gene_id: JWYL7_1090
symbol: JWYL7_1090
gene_biotype: protein_coding
description:
  ClpP/TepA; KEGG: Prophage Clp protease-like protein; PFAM: ClpP/TepA; Belongs to the peptidase S14 family.


ensembl_gene_id: JWYL7_1093
symbol: JWYL7_1093
gene_biotype: protein_coding
description:
  PFAM: terminase small subunit P27; KEGG: hypothetical protein; TIGRFAM: phage terminase, small subunit, P27 family.


ensembl_gene_id: JWYL7_1098
symbol: JWYL7_1098
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function DUF3440, phosphoadenosine phosphosulfate reductase; KEGG: phosphoadenosine phosphosulfate reductase.


ensembl_gene_id: JWYL7_1106
symbol: JWYL7_1106
gene_biotype: protein_coding
description:
  Thymidylate synthase, flavin-dependent; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: JWYL7_1110
symbol: JWYL7_1110
gene_biotype: protein_coding
description:
  KEGG: MazG nucleotide pyrophosphohydrolase domain-containing protein; PFAM: MazG nucleotide pyrophosphohydrolase.


ensembl_gene_id: JWYL7_1112
symbol: JWYL7_1112
gene_biotype: protein_coding
description:
  TIGRFAM: single-strand binding protein; KEGG: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n.


ensembl_gene_id: JWYL7_1115
symbol: JWYL7_1115
gene_biotype: protein_coding
description:
  TIGRFAM: phage recombination protein Bet; KEGG: recombination protein Bet; PFAM: DNA single-strand annealing protein RecT-like protein.


ensembl_gene_id: JWYL7_1121
symbol: JWYL7_1121
gene_biotype: protein_coding
description:
  Transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein; KEGG: transcriptional regulator.


ensembl_gene_id: JWYL7_1122
symbol: JWYL7_1122
gene_biotype: protein_coding
description:
  KEGG: XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein.


ensembl_gene_id: JWYL7_1124
symbol: JWYL7_1124
gene_biotype: protein_coding
description:
  DNA polymerase III, epsilon subunit; SMART: Exonuclease; PFAM: Exonuclease RNase T and DNA polymerase III; KEGG: DNA polymerase III; TIGRFAM: DNA polymerase III, epsilon subunit.


ensembl_gene_id: JWYL7_1126
symbol: JWYL7_1126
gene_biotype: protein_coding
description:
  KEGG: DNA recombinase; PFAM: Resolvase domain-containing protein, Recombinase, Recombinase zinc beta ribbon domain; SMART: Resolvase domain-containing protein.


ensembl_gene_id: JWYL7_1127
symbol: JWYL7_1127
gene_biotype: protein_coding
description:
  PFAM: magnesium chelatase ChlI subunit; KEGG: magnesium chelatase; TIGRFAM: Mg chelatase, subunit ChlI; SMART: AAA ATPase.


ensembl_gene_id: JWYL7_1128
symbol: JWYL7_1128
gene_biotype: protein_coding
description:
  UPF0102 protein yraN; PFAM: Uncharacterized protein family UPF0102; TIGRFAM: Uncharacterized protein family UPF0102; KEGG: hypothetical protein; HAMAP : UPF0102 protein yraN; Belongs to the UPF0102 family.


ensembl_gene_id: JWYL7_1132
symbol: JWYL7_1132
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTP-binding protein YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: JWYL7_1133
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: JWYL7_1134
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: JWYL7_1135
symbol: rimM
gene_biotype: protein_coding
description:
  Ribosome maturation factor rimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: JWYL7_1137
symbol: rpsP
gene_biotype: protein_coding
description:
  PFAM: ribosomal protein S16; TIGRFAM: ribosomal protein S16; KEGG: 30S ribosomal protein S16; HAMAP : 30S ribosomal protein S16; Belongs to the bacterial ribosomal protein bS16 family.


ensembl_gene_id: JWYL7_1138
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition 54 kDa protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: JWYL7_1139
symbol: JWYL7_1139
gene_biotype: protein_coding
description:
  Putative transcriptional regulator with HTH domain containing protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.


ensembl_gene_id: JWYL7_1140
symbol: ftsY
gene_biotype: protein_coding
description:
  Cell division transporter substrate-binding protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: JWYL7_1143
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: JWYL7_1145
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: JWYL7_1147
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: JWYL7_1149
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: JWYL7_1150
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: JWYL7_1155
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: JWYL7_1156
symbol: JWYL7_1156
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function UPF0047; KEGG: hypothetical protein; TIGRFAM: protein of unknown function UPF0047.


ensembl_gene_id: JWYL7_1158
symbol: rpsU
gene_biotype: protein_coding
description:
  HAMAP : 30S ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21; KEGG: 30S ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.


ensembl_gene_id: JWYL7_1160
symbol: JWYL7_1160
gene_biotype: protein_coding
description:
  MiaB-like tRNA modifying enzyme; PFAM: Radical SAM domain protein, protein of unknown function UPF0004; KEGG: radical SAM protein; TIGRFAM: MiaB-like tRNA modifying enzyme, RNA modification enzyme, MiaB family; SMART: Elongator protein 3/MiaB/NifB.


ensembl_gene_id: JWYL7_1161
symbol: JWYL7_1161
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: JWYL7_1162
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: JWYL7_1163
symbol: dnaJ
gene_biotype: protein_coding
description:
  Chaperone protein dnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]


ensembl_gene_id: JWYL7_1165
symbol: grpE
gene_biotype: protein_coding
description:
  Protein grpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...]


ensembl_gene_id: JWYL7_1166
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: JWYL7_1167
symbol: JWYL7_1167
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: JWYL7_1168
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein lepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: JWYL7_1170
symbol: JWYL7_1170
gene_biotype: protein_coding
description:
  KEGG: stage II sporulation P family protein; TIGRFAM: stage II sporulation protein P; PFAM: Stage II sporulation P family protein.


ensembl_gene_id: JWYL7_1171
symbol: gpr
gene_biotype: protein_coding
description:
  Germination protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.


ensembl_gene_id: JWYL7_1173
symbol: JWYL7_1173
gene_biotype: protein_coding
description:
  KEGG: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta.


ensembl_gene_id: JWYL7_1179
symbol: JWYL7_1179
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; PFAM: Lysylphosphatidylglycerol synthetase, domain of unknown function DUF2156.


ensembl_gene_id: JWYL7_1184
symbol: JWYL7_1184
gene_biotype: protein_coding
description:
  PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: inosine-uridine nucleoside N-ribohydrolase.


ensembl_gene_id: JWYL7_1185
symbol: JWYL7_1185
gene_biotype: protein_coding
description:
  SMART: Lipoprotein LpqB, GerMN domain-containing protein; PFAM: Lipoprotein LpqB, GerMN domain-containing protein; KEGG: Lipoprotein LpqB, GerMN domain-containing protein.


ensembl_gene_id: JWYL7_1186
symbol: JWYL7_1186
gene_biotype: protein_coding
description:
  Histidine kinase; PFAM: ATP-binding region ATPase domain protein, histidine kinase HAMP region domain protein, histidine kinase A domain protein; KEGG: histidine kinase; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, histidine kinase HAMP region domain protein.


ensembl_gene_id: JWYL7_1187
symbol: JWYL7_1187
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, winged helix family; KEGG: two component transcriptional regulator; PFAM: transcriptional regulator domain-containing protein, response regulator receiver; SMART: response regulator receiver, transcriptional regulator domain-containing protein.


ensembl_gene_id: JWYL7_1188
symbol: JWYL7_1188
gene_biotype: protein_coding
description:
  PFAM: protein synthesis factor GTP-binding protein, elongation factor Tu domain 2 protein, Elongation factor SelB winged helix 3, Elongation factor SelB winged helix 2; TIGRFAM: selenocysteine-specific translation elongation factor, small GTP-binding protein; KEGG: selenocysteine-specific elongation factor.


ensembl_gene_id: JWYL7_1189
symbol: selA
gene_biotype: protein_coding
description:
  L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.


ensembl_gene_id: JWYL7_1191
symbol: JWYL7_1191
gene_biotype: protein_coding
description:
  KEGG: competence protein; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: Soluble ligand binding domain-containing protein.


ensembl_gene_id: JWYL7_1192
symbol: JWYL7_1192
gene_biotype: protein_coding
description:
  Serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1, Penicillin-binding protein 5 domain protein; KEGG: Serine-type D-Ala-D-Ala carboxypeptidase; SMART: Penicillin-binding protein 5 domain protein; Belongs to the peptidase S11 family.


ensembl_gene_id: JWYL7_1193
symbol: JWYL7_1193
gene_biotype: protein_coding
description:
  KEGG: L-serine dehydratase, iron-sulfur-dependent subunit alpha; PFAM: serine dehydratase alpha chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, alpha subunit.


ensembl_gene_id: JWYL7_1194
symbol: JWYL7_1194
gene_biotype: protein_coding
description:
  L-serine dehydratase, iron-sulfur-dependent, beta subunit; PFAM: serine dehydratase beta chain, amino acid-binding ACT domain-containing protein; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, beta subunit; KEGG: L-serine dehydratase, iron-sulfur-dependent subunit beta.


ensembl_gene_id: JWYL7_1195
symbol: JWYL7_1195
gene_biotype: protein_coding
description:
  TIGRFAM: endoribonuclease L-PSP; KEGG: putative endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP.


ensembl_gene_id: JWYL7_1196
symbol: JWYL7_1196
gene_biotype: protein_coding
description:
  Threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit, amino acid-binding ACT domain-containing protein; KEGG: threonine dehydratase; TIGRFAM: threonine dehydratase.


ensembl_gene_id: JWYL7_1197
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: JWYL7_1198
symbol: JWYL7_1198
gene_biotype: protein_coding
description:
  PFAM: thiamine transporter YuaJ; TIGRFAM: proton-coupled thiamine transporter YuaJ; KEGG: yuaJ, hypothetical protein.


ensembl_gene_id: JWYL7_1200
symbol: leuS
gene_biotype: protein_coding
description:
  HAMAP : leucyl-tRNA synthetase class Ia; KEGG: leuS, leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: JWYL7_1201
symbol: rsfS
gene_biotype: protein_coding
description:
  Iojap-like protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: JWYL7_1202
symbol: JWYL7_1202
gene_biotype: protein_coding
description:
  PFAM: cell envelope-related transcriptional attenuator; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; KEGG: cell envelope-related transcriptional attenuator.


ensembl_gene_id: JWYL7_1203
symbol: JWYL7_1203
gene_biotype: protein_coding
description:
  PFAM: metal-dependent phosphohydrolase HD sub domain-containing protein; KEGG: hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP00488; SMART: metal-dependent phosphohydrolase HD region.


ensembl_gene_id: JWYL7_1204
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: JWYL7_1206
symbol: JWYL7_1206
gene_biotype: protein_coding
description:
  KEGG: zinc carboxypeptidase; PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A.


ensembl_gene_id: JWYL7_1207
symbol: JWYL7_1207
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; TIGRFAM: RNA-binding, CRM domain-containing protein; SMART: protein of unknown function UPF0044; PFAM: protein of unknown function UPF0044.


ensembl_gene_id: JWYL7_1208
symbol: obg
gene_biotype: protein_coding
description:
  GTPase obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: JWYL7_1210
symbol: rpmA
gene_biotype: protein_coding
description:
  HAMAP : 50S ribosomal protein L27; KEGG: rpmA, 50S ribosomal protein L27; TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.


ensembl_gene_id: JWYL7_1212
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: JWYL7_1214
symbol: JWYL7_1214
gene_biotype: protein_coding
description:
  Ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G, RNA binding S1 domain protein; SMART: RNA-binding domain, S1; TIGRFAM: ribonuclease, Rne/Rng family; KEGG: rng, ribonuclease G (RNase G) (Cytoplasmic axial filament protein).


ensembl_gene_id: JWYL7_1215
symbol: JWYL7_1215
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function DUF2344; KEGG: hypothetical protein; TIGRFAM: Protein of unknown function DUF2344.


ensembl_gene_id: JWYL7_1217
symbol: JWYL7_1217
gene_biotype: protein_coding
description:
  SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Conserved hypothetical protein CHP03960, radical SAM; KEGG: radical SAM protein; PFAM: Radical SAM domain protein.


ensembl_gene_id: JWYL7_1219
symbol: JWYL7_1219
gene_biotype: protein_coding
description:
  PFAM: beta-lactamase domain protein, flavodoxin/nitric oxide synthase; KEGG: anaerobic nitric oxide reductase flavorubredoxin; SMART: beta-lactamase domain protein.


ensembl_gene_id: JWYL7_1222
symbol: JWYL7_1222
gene_biotype: protein_coding
description:
  PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein, 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; KEGG: 3-hydroxybutyryl-CoA dehydrogenase.


ensembl_gene_id: JWYL7_1223
symbol: JWYL7_1223
gene_biotype: protein_coding
description:
  KEGG: CaiD, 3-hydroxybutyryl-CoA dehydratase; PFAM: Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: JWYL7_1226
symbol: JWYL7_1226
gene_biotype: protein_coding
description:
  KEGG: DNA mismatch repair protein MutS domain-containing protein; PFAM: DNA mismatch repair protein MutS domain protein; SMART: DNA mismatch repair protein MutS domain protein, MutS III domain protein.


ensembl_gene_id: JWYL7_1228
symbol: JWYL7_1228
gene_biotype: protein_coding
description:
  Lysine-2,3-aminomutase; KEGG: kamA, l-lysine 2,3-aminomutase; PFAM: Lysine-2,3-aminomutase, C-terminal domain, Radical SAM domain protein; TIGRFAM: lysine-2,3-aminomutase, lysine 2,3-aminomutase YodO family protein.


ensembl_gene_id: JWYL7_1230
symbol: JWYL7_1230
gene_biotype: protein_coding
description:
  KEGG: AtoA, acyl-CoA:acetate CoA transferase subunit beta; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; SMART: coenzyme A transferase; PFAM: coenzyme A transferase.


ensembl_gene_id: JWYL7_1231
symbol: JWYL7_1231
gene_biotype: protein_coding
description:
  3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase; SMART: coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; KEGG: AtoD, acyl-CoA:acetate CoA transferase subunit alpha.


ensembl_gene_id: JWYL7_1235
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: JWYL7_1236
symbol: JWYL7_1236
gene_biotype: protein_coding
description:
  PFAM: Cobyrinic acid ac-diamide synthase; KEGG: septum site-determining protein (cell division inhibitor); TIGRFAM: septum site-determining protein MinD.


ensembl_gene_id: JWYL7_1237
symbol: minC
gene_biotype: protein_coding
description:
  Septum site-determining protein minC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: JWYL7_1238
symbol: JWYL7_1238
gene_biotype: protein_coding
description:
  PFAM: Penicillin-binding protein dimerization domain-containing protein, penicillin-binding protein transpeptidase; KEGG: penicillin-binding protein, transpeptidase.


ensembl_gene_id: JWYL7_1239
symbol: JWYL7_1239
gene_biotype: protein_coding
description:
  PFAM: Rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD; KEGG: permease.


ensembl_gene_id: JWYL7_1241
symbol: JWYL7_1241
gene_biotype: protein_coding
description:
  PFAM: cell shape determining protein MreB/Mrl; KEGG: rod shape-determining protein MreB; TIGRFAM: cell shape determining protein, MreB/Mrl family.


ensembl_gene_id: JWYL7_1242
symbol: JWYL7_1242
gene_biotype: protein_coding
description:
  PFAM: RadC-like JAB domain; TIGRFAM: DNA repair protein RadC; KEGG: radC, DNA repair protein RadC; Belongs to the UPF0758 family.


ensembl_gene_id: JWYL7_1243
symbol: JWYL7_1243
gene_biotype: protein_coding
description:
  Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: JWYL7_1244
symbol: rnfB
gene_biotype: protein_coding
description:
  Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.


ensembl_gene_id: JWYL7_1245
symbol: rnfA
gene_biotype: protein_coding
description:
  Electron transport complex, RnfABCDGE type, A subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: JWYL7_1246
symbol: rnfE
gene_biotype: protein_coding
description:
  Electron transport complex, RnfABCDGE type, E subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: JWYL7_1247
symbol: rnfG
gene_biotype: protein_coding
description:
  Electron transport complex, RnfABCDGE type, G subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.


ensembl_gene_id: JWYL7_1248
symbol: rnfD
gene_biotype: protein_coding
description:
  Electron transport complex, RnfABCDGE type, D subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: JWYL7_1249
symbol: rnfC
gene_biotype: protein_coding
description:
  Electron transport complex protein rnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.


ensembl_gene_id: JWYL7_1255
symbol: coaE
gene_biotype: protein_coding
description:
  Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: JWYL7_1256
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.


ensembl_gene_id: JWYL7_1258
symbol: JWYL7_1258
gene_biotype: protein_coding
description:
  Site-specific DNA-methyltransferase (adenine-specific); KEGG: adenine specific DNA methylase Mod; PFAM: DNA methylase N-4/N-6 domain protein.


ensembl_gene_id: JWYL7_1260
symbol: JWYL7_1260
gene_biotype: protein_coding
description:
  SMART: helicase domain-containing protein, DEAD-like helicase; PFAM: helicase domain-containing protein, SNF2-related protein; KEGG: DNA/RNA helicase.


ensembl_gene_id: JWYL7_1261
symbol: JWYL7_1261
gene_biotype: protein_coding
description:
  Putative transcriptional regulator; PFAM: AAA-4 family protein, ATP-dependent DNA helicase RecG C-terminal domain; KEGG: putative transcriptional regulator with HTH domain.


ensembl_gene_id: JWYL7_1262
symbol: JWYL7_1262
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; PFAM: LysR substrate-binding protein, regulatory protein LysR; KEGG: LysR family transcriptional regulator.


ensembl_gene_id: JWYL7_1264
symbol: JWYL7_1264
gene_biotype: protein_coding
description:
  Two component transcriptional regulator, LuxR family; KEGG: degU, degu; PFAM: response regulator receiver, regulatory protein LuxR; SMART: response regulator receiver, regulatory protein LuxR.


ensembl_gene_id: JWYL7_1265
symbol: JWYL7_1265
gene_biotype: protein_coding
description:
  KEGG: degS, two-component sensor histidine kinase; PFAM: Sensor DegS domain protein, ATP-binding region ATPase domain protein, histidine kinase dimerization and phosphoacceptor region.


ensembl_gene_id: JWYL7_1268
symbol: JWYL7_1268
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family with aminotransferase domain containing protein; PFAM: aminotransferase class I and II, regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: aminotransferase.


ensembl_gene_id: JWYL7_1270
symbol: JWYL7_1270
gene_biotype: protein_coding
description:
  PFAM: PHP domain protein; KEGG: HisJ family histidinol phosphate phosphatase; TIGRFAM: histidinol phosphate phosphatase HisJ family; SMART: phosphoesterase PHP domain protein; Belongs to the PHP hydrolase family. HisK subfamily.


ensembl_gene_id: JWYL7_1271
symbol: mtaD
gene_biotype: protein_coding
description:
  5-methylthioadenosine/S-adenosylhomocysteine deaminase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family.


ensembl_gene_id: JWYL7_1282
symbol: hutI
gene_biotype: protein_coding
description:
  Imidazolonepropionase; PFAM: amidohydrolase; TIGRFAM: imidazolonepropionase; KEGG: hutI, imidazolonepropionase; HAMAP : Imidazolonepropionase.


ensembl_gene_id: JWYL7_1283
symbol: JWYL7_1283
gene_biotype: protein_coding
description:
  KEGG: glutamate formiminotransferase; PFAM: Formiminotransferase domain protein, Formiminotransferase domain protein; TIGRFAM: glutamate formiminotransferase.


ensembl_gene_id: JWYL7_1285
symbol: hutH
gene_biotype: protein_coding
description:
  PFAM: phenylalanine/histidine ammonia-lyase; HAMAP : Histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase; KEGG: histidine ammonia-lyase; Belongs to the PAL/histidase family.


ensembl_gene_id: JWYL7_1286
symbol: JWYL7_1286
gene_biotype: protein_coding
description:
  Transcriptional regulator, LacI family; KEGG: catabolite control protein a; PFAM: regulatory protein LacI; SMART: regulatory protein LacI.


ensembl_gene_id: JWYL7_1296
symbol: nadK
gene_biotype: protein_coding
description:
  Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: JWYL7_1297
symbol: JWYL7_1297
gene_biotype: protein_coding
description:
  TIGRFAM: phosphodiesterase, MJ0936 family; KEGG: phosphodiesterase; PFAM: Calcineurin-like phosphoesterase superfamily domain.


ensembl_gene_id: JWYL7_1302
symbol: JWYL7_1302
gene_biotype: protein_coding
description:
  PFAM: multi antimicrobial extrusion protein MatE; TIGRFAM: MATE efflux family protein; KEGG: putative efflux protein, MATE family.


ensembl_gene_id: JWYL7_1303
symbol: JWYL7_1303
gene_biotype: protein_coding
description:
  Oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related protein, Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: oligopeptide/dipeptide ABC transporter ATPase; Belongs to the ABC transporter superfamily.


ensembl_gene_id: JWYL7_1305
symbol: JWYL7_1305
gene_biotype: protein_coding
description:
  KEGG: peptide ABC transporter permease; PFAM: ABC-type transporter, integral membrane subunit, Oligopeptide transport permease C-like, N-terminal domain.


ensembl_gene_id: JWYL7_1306
symbol: JWYL7_1306
gene_biotype: protein_coding
description:
  ABC-type transporter, integral membrane subunit; KEGG: dipeptide/oligopeptide/nickel ABC transporter permease; PFAM: ABC-type transporter, integral membrane subunit.


ensembl_gene_id: JWYL7_1309
symbol: JWYL7_1309
gene_biotype: protein_coding
description:
  Spore photoproduct lyase; KEGG: radical SAM domain-containing protein; TIGRFAM: Spore photoproduct lyase.


ensembl_gene_id: JWYL7_1310
symbol: JWYL7_1310
gene_biotype: protein_coding
description:
  KEGG: putative glycosyl hydrolase; PFAM: glycoside hydrolase family 18, Peptidoglycan-binding lysin domain-containing protein; SMART: chitinase II, Peptidoglycan-binding LysM.


ensembl_gene_id: JWYL7_1312
symbol: pepT
gene_biotype: protein_coding
description:
  Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.


ensembl_gene_id: JWYL7_1313
symbol: JWYL7_1313
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF21, transporter-associated region, CBS domain containing protein; KEGG: integral membrane protein; SMART: transporter-associated region, CBS domain containing protein.


ensembl_gene_id: JWYL7_1318
symbol: asnA
gene_biotype: protein_coding
description:
  PFAM: aspartate--ammonia ligase; HAMAP : Aspartate--ammonia ligase; KEGG: asnA, asparagine synthetase AsnA; TIGRFAM: aspartate/ammonia ligase.


ensembl_gene_id: JWYL7_1319
symbol: JWYL7_1319
gene_biotype: protein_coding
description:
  PFAM: Flavodoxin domain, 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein; KEGG: ferredoxin.


ensembl_gene_id: JWYL7_1320
symbol: JWYL7_1320
gene_biotype: protein_coding
description:
  Diguanylate cyclase with PAS/PAC sensor; PFAM: GGDEF domain containing protein, CHASE4 domain protein; SMART: GGDEF domain containing protein, PAS domain containing protein; TIGRFAM: diguanylate cyclase, PAS sensor protein; KEGG: signal transduction protein.


ensembl_gene_id: JWYL7_1322
symbol: JWYL7_1322
gene_biotype: protein_coding
description:
  SMART: chemotaxis sensory transducer, histidine kinase HAMP region domain protein; KEGG: tlpC, methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer, histidine kinase HAMP region domain protein.


ensembl_gene_id: JWYL7_1323
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: JWYL7_1324
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: JWYL7_1328
symbol: hppA
gene_biotype: protein_coding
description:
  Pyrophosphate-energized proton pump; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily.


ensembl_gene_id: JWYL7_1329
symbol: JWYL7_1329
gene_biotype: protein_coding
description:
  Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: JWYL7_1330
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: JWYL7_1331
symbol: gpmI
gene_biotype: protein_coding
description:
  2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: JWYL7_1332
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase, bacterial/eukaryotic; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: JWYL7_1333
symbol: pgk
gene_biotype: protein_coding
description:
  KEGG: pgk, phosphoglycerate kinase; HAMAP : Phosphoglycerate kinase; PFAM: phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.


ensembl_gene_id: JWYL7_1334
symbol: JWYL7_1334
gene_biotype: protein_coding
description:
  SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain-containing protein; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain-containing protein, Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain-containing protein; KEGG: glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: JWYL7_1335
symbol: JWYL7_1335
gene_biotype: protein_coding
description:
  Transcriptional regulator, DeoR family; KEGG: central glycolytic genes regulator; PFAM: sugar-binding domain-containing protein.


ensembl_gene_id: JWYL7_1336
symbol: JWYL7_1336
gene_biotype: protein_coding
description:
  KEGG: RNA polymerase sigma-54 factor; TIGRFAM: RNA polymerase sigma-54 factor, RpoN; PFAM: sigma-54 DNA-binding domain protein, sigma-54 factor, sigma-54 factor core-binding region.


ensembl_gene_id: JWYL7_1337
symbol: JWYL7_1337
gene_biotype: protein_coding
description:
  Transposase, IS605 OrfB family; PFAM: transposase IS891/IS1136/IS1341 family, transposase IS605 OrfB; TIGRFAM: transposase, IS605 OrfB family; KEGG: transposase, OrfB family.


ensembl_gene_id: JWYL7_1338
symbol: JWYL7_1338
gene_biotype: protein_coding
description:
  SMART: Resolvase domain-containing protein; PFAM: Resolvase domain-containing protein; KEGG: site-specific integrase-resolvase.


ensembl_gene_id: JWYL7_1339
symbol: JWYL7_1339
gene_biotype: protein_coding
description:
  Sporulation uncharacterized protein YkwD; PFAM: SCP-like extracellular, Peptidoglycan-binding lysin domain-containing protein; SMART: Peptidoglycan-binding LysM; TIGRFAM: Sporulation uncharacterized protein YkwD, spore coat assembly protein SafA; KEGG: spore coat assembly protein SafA/uncharacterized protein, YkwD family.


ensembl_gene_id: JWYL7_1340
symbol: JWYL7_1340
gene_biotype: protein_coding
description:
  Methionine gamma-lyase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; TIGRFAM: methionine gamma-lyase; KEGG: megL, methionine gamma-lyase.


ensembl_gene_id: JWYL7_1341
symbol: JWYL7_1341
gene_biotype: protein_coding
description:
  PAS modulated sigma54 specific transcriptional regulator, Fis family; KEGG: transcriptional regulator; SMART: AAA ATPase, PAS domain containing protein; TIGRFAM: PAS sensor protein; PFAM: sigma-54 factor interaction domain-containing protein, helix-turn-helix Fis-type.


ensembl_gene_id: JWYL7_1342
symbol: hslO
gene_biotype: protein_coding
description:
  33 kDa chaperonin; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: JWYL7_1346
symbol: JWYL7_1346
gene_biotype: protein_coding
description:
  TIGRFAM: amidohydrolase; PFAM: peptidase M20, peptidase dimerization domain protein; KEGG: amidohydrolase.


ensembl_gene_id: JWYL7_1347
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: JWYL7_1348
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: JWYL7_1349
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: JWYL7_1350
symbol: dapH
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate.


ensembl_gene_id: JWYL7_1352
symbol: JWYL7_1352
gene_biotype: protein_coding
description:
  HAMAP : UPF0597 protein yhaM; KEGG: hypothetical protein; PFAM: serine dehydratase alpha chain; Belongs to the UPF0597 family.


ensembl_gene_id: JWYL7_1353
symbol: JWYL7_1353
gene_biotype: protein_coding
description:
  Sigma54 specific transcriptional regulator, Fis family; SMART: AAA ATPase; PFAM: sigma-54 factor interaction domain-containing protein, helix-turn-helix Fis-type; KEGG: sigma-54 interacting protein.


ensembl_gene_id: JWYL7_1356
symbol: JWYL7_1356
gene_biotype: protein_coding
description:
  KEGG: single-stranded DNA-binding protein; PFAM: single-strand binding protein/Primosomal replication protein n.


ensembl_gene_id: JWYL7_1360
symbol: JWYL7_1360
gene_biotype: protein_coding
description:
  KEGG: D-proline reductase; PFAM: Glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits.


ensembl_gene_id: JWYL7_1363
symbol: JWYL7_1363
gene_biotype: protein_coding
description:
  D-proline reductase (dithiol); PFAM: Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase; KEGG: D-proline reductase.


ensembl_gene_id: JWYL7_1365
symbol: JWYL7_1365
gene_biotype: protein_coding
description:
  D-proline reductase (dithiol); KEGG: glycine/sarcosine/betaine reductase complex protein B subunits alpha and beta; PFAM: Glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits.


ensembl_gene_id: JWYL7_1366
symbol: JWYL7_1366
gene_biotype: protein_coding
description:
  KEGG: prdC, electron transfer protein; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit, RnfC Barrel sandwich hybrid domain.


ensembl_gene_id: JWYL7_1367
symbol: JWYL7_1367
gene_biotype: protein_coding
description:
  PAS modulated sigma54 specific transcriptional regulator, Fis family; KEGG: sigma-54-dependent transcriptional activator; TIGRFAM: PAS sensor protein; SMART: PAS domain containing protein, AAA ATPase, CBS domain containing protein; PFAM: sigma-54 factor interaction domain-containing protein, helix-turn-helix Fis-type, CBS domain containing protein.


ensembl_gene_id: JWYL7_1368
symbol: JWYL7_1368
gene_biotype: protein_coding
description:
  TIGRFAM: polysaccharide deacetylase family sporulation protein PdaB; KEGG: polysaccharide deacetylase; PFAM: polysaccharide deacetylase.


ensembl_gene_id: JWYL7_1370
symbol: JWYL7_1370
gene_biotype: protein_coding
description:
  KEGG: small acid-soluble spore protein alpha/beta type; PFAM: small acid-soluble spore protein alpha/beta type.


ensembl_gene_id: JWYL7_1374
symbol: argH
gene_biotype: protein_coding
description:
  HAMAP : Argininosuccinate lyase; KEGG: argH, argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: Lyase 1, N-terminal.


ensembl_gene_id: JWYL7_1375
symbol: argG
gene_biotype: protein_coding
description:
  HAMAP : Argininosuccinate synthase; KEGG: argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: argininosuccinate synthase; Belongs to the argininosuccinate synthase family. Type 1 subfamily.


ensembl_gene_id: JWYL7_1376
symbol: JWYL7_1376
gene_biotype: protein_coding
description:
  KEGG: putative peptidoglycan-binding domain-containing protein; PFAM: Peptidoglycan-binding domain 1 protein.


ensembl_gene_id: JWYL7_1377
symbol: JWYL7_1377
gene_biotype: protein_coding
description:
  FolC bifunctional protein; KEGG: bifunctional folylpolyglutamate synthase/dihydrofolate synthase; TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein, cytoplasmic peptidoglycan synthetase domain protein.


ensembl_gene_id: JWYL7_1378
symbol: valS
gene_biotype: protein_coding
description:
  Valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: JWYL7_1379
symbol: JWYL7_1379
gene_biotype: protein_coding
description:
  SMART: Peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain-containing protein; KEGG: peptidoglycan-binding domain 1 protein.


ensembl_gene_id: JWYL7_1385
symbol: JWYL7_1385
gene_biotype: protein_coding
description:
  SMART: Glu/Leu/Phe/Val dehydrogenase; KEGG: glutamate dehydrogenase (NADP(+)); PFAM: Glu/Leu/Phe/Val dehydrogenase, Glu/Leu/Phe/Val dehydrogenase dimerization region; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: JWYL7_1387
symbol: JWYL7_1387
gene_biotype: protein_coding
description:
  PFAM: ABC transporter related protein; SMART: AAA ATPase; KEGG: znuC, zinc ABC transporter ATP-binding protein.


ensembl_gene_id: JWYL7_1388
symbol: JWYL7_1388
gene_biotype: protein_coding
description:
  PFAM: sodium:dicarboxylate symporter; KEGG: proton/glutamate symporter family protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: JWYL7_1389
symbol: JWYL7_1389
gene_biotype: protein_coding
description:
  YcbB domain-containing protein; KEGG: signal transduction response regulator; PFAM: YcbB domain-containing protein.


ensembl_gene_id: JWYL7_1391
symbol: JWYL7_1391
gene_biotype: protein_coding
description:
  SMART: ATP-binding region ATPase domain protein; KEGG: signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein.


ensembl_gene_id: JWYL7_1392
symbol: JWYL7_1392
gene_biotype: protein_coding
description:
  TIGRFAM: oligoendopeptidase F; KEGG: oligoendopeptidase F, M3B family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F, Oligopeptidase F.


ensembl_gene_id: JWYL7_1394
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: JWYL7_1399
symbol: JWYL7_1399
gene_biotype: protein_coding
description:
  PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain-containing protein; KEGG: ptsG, PTS system glucose-specific transporter subunit IIABC; TIGRFAM: PTS system, glucose subfamily, IIA subunit.


ensembl_gene_id: JWYL7_1400
symbol: purE
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: JWYL7_1401
symbol: purK
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase, ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: JWYL7_1404
symbol: JWYL7_1404
gene_biotype: protein_coding
description:
  Fe(3+)-transporting ATPase; KEGG: ABC transporter ATP-binding protein; SMART: AAA ATPase; PFAM: ABC transporter related protein.


ensembl_gene_id: JWYL7_1406
symbol: JWYL7_1406
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport system II carrier protein; Component of the transport system for branched-chain amino acids.


ensembl_gene_id: JWYL7_1409
symbol: pgi
gene_biotype: protein_coding
description:
  PFAM: phosphoglucose isomerase (PGI); HAMAP : Glucose-6-phosphate isomerase; KEGG: pgi, glucose-6-phosphate isomerase; Belongs to the GPI family.


ensembl_gene_id: JWYL7_1410
symbol: JWYL7_1410
gene_biotype: protein_coding
description:
  KEGG: nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.


ensembl_gene_id: JWYL7_1411
symbol: JWYL7_1411
gene_biotype: protein_coding
description:
  Na/Pi-cotransporter II-related protein; PFAM: Na+/Picotransporter, PhoU domain; KEGG: sodium-dependent phosphate transporter; TIGRFAM: Na/Pi-cotransporter II-related protein.


ensembl_gene_id: JWYL7_1413
symbol: JWYL7_1413
gene_biotype: protein_coding
description:
  KEGG: pckA, phosphoenolpyruvate carboxykinase; PFAM: phosphoenolpyruvate carboxykinase (ATP); Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.


ensembl_gene_id: JWYL7_1423
symbol: JWYL7_1423
gene_biotype: protein_coding
description:
  SMART: chemotaxis sensory transducer, histidine kinase HAMP region domain protein; KEGG: methyl-accepting chemotaxis protein; PFAM: chemotaxis sensory transducer, histidine kinase HAMP region domain protein.


ensembl_gene_id: JWYL7_1424
symbol: JWYL7_1424
gene_biotype: protein_coding
description:
  PFAM: Heme NO binding domain protein, chemotaxis sensory transducer; KEGG: methyl-accepting chemotaxis protein; SMART: chemotaxis sensory transducer.


ensembl_gene_id: JWYL7_1432
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein engB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: JWYL7_1433
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: JWYL7_1434
symbol: JWYL7_1434
gene_biotype: protein_coding
description:
  PFAM: Chromate transporter; KEGG: chrA, chromate transport protein; overlaps another CDS with the same product name.


ensembl_gene_id: JWYL7_1435
symbol: JWYL7_1435
gene_biotype: protein_coding
description:
  KEGG: chromate transporter protein; PFAM: Chromate transporter; overlaps another CDS with the same product name.


ensembl_gene_id: JWYL7_1436
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit clpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: JWYL7_1437
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: JWYL7_1438
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: JWYL7_1441
symbol: JWYL7_1441
gene_biotype: protein_coding
description:
  Phosphodiesterase, MJ0936 family; PFAM: Calcineurin-like phosphoesterase superfamily domain; TIGRFAM: phosphodiesterase, MJ0936 family; KEGG: phosphoesterase.


ensembl_gene_id: JWYL7_1442
symbol: rph
gene_biotype: protein_coding
description:
  Nucleoside-triphosphatase rdgB; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: JWYL7_1443
symbol: JWYL7_1443
gene_biotype: protein_coding
description:
  KEGG: AIR synthase-like protein domain-containing protein; PFAM: AIR synthase related protein domain protein, AIR synthase related protein.


ensembl_gene_id: JWYL7_1445
symbol: JWYL7_1445
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, periplasmic subunit; KEGG: oppA, peptide ABC transporter substrate-binding protein.


ensembl_gene_id: JWYL7_1446
symbol: JWYL7_1446
gene_biotype: protein_coding
description:
  Oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related protein, Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: oppF, oligopeptide ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.


ensembl_gene_id: JWYL7_1447
symbol: JWYL7_1447
gene_biotype: protein_coding
description:
  TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: oppD, oligopeptide ABC transporter ATP-binding protein; PFAM: Oligopeptide/dipeptide ABC transporter domain protein, ABC transporter related protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.


ensembl_gene_id: JWYL7_1448
symbol: JWYL7_1448
gene_biotype: protein_coding
description:
  KEGG: oppC, oligopeptide ABC transporter membrane protein; PFAM: ABC-type transporter, integral membrane subunit, Oligopeptide transport permease C-like, N-terminal domain.


ensembl_gene_id: JWYL7_1449
symbol: JWYL7_1449
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: oppB, oligopeptide ABC transporter membrane protein.


ensembl_gene_id: JWYL7_1450
symbol: JWYL7_1450
gene_biotype: protein_coding
description:
  PFAM: hydrogenase large subunit domain protein, NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein, 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein; SMART: NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein; KEGG: hydrogenase, Fe-only.


ensembl_gene_id: JWYL7_1451
symbol: JWYL7_1451
gene_biotype: protein_coding
description:
  PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein, NADH ubiquinone oxidoreductase, F subunit, iron sulfur binding protein, Soluble ligand binding domain-containing protein; SMART: NADH ubiquinone oxidoreductase, F subunit, iron sulfur binding protein; KEGG: NADH dehydrogenase (quinone).


ensembl_gene_id: JWYL7_1453
symbol: gatB
gene_biotype: protein_coding
description:
  Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: JWYL7_1454
symbol: gatA
gene_biotype: protein_coding
description:
  Glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: JWYL7_1455
symbol: gatC
gene_biotype: protein_coding
description:
  Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: JWYL7_1456
symbol: JWYL7_1456
gene_biotype: protein_coding
description:
  Transcriptional regulator, Crp/Fnr family; SMART: cyclic nucleotide-binding protein, regulatory protein Crp; PFAM: cyclic nucleotide-binding protein; KEGG: Crp/Fnr family transcriptional regulator.


ensembl_gene_id: JWYL7_1457
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: JWYL7_1458
symbol: JWYL7_1458
gene_biotype: protein_coding
description:
  PFAM: ABC-type metal ion transporter, periplasmic subunit; KEGG: zinc ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: JWYL7_1460
symbol: JWYL7_1460
gene_biotype: protein_coding
description:
  KEGG: winged helix family two component transcriptional regulator; PFAM: response regulator receiver, transcriptional regulator domain-containing protein; SMART: response regulator receiver, transcriptional regulator domain-containing protein.


ensembl_gene_id: JWYL7_1461
symbol: JWYL7_1461
gene_biotype: protein_coding
description:
  Integral membrane sensor signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein, histidine kinase A domain protein, histidine kinase HAMP region domain protein; PFAM: ATP-binding region ATPase domain protein, histidine kinase A domain protein, histidine kinase HAMP region domain protein; KEGG: two-component system signal transduction histidine kinase.


ensembl_gene_id: JWYL7_1462
symbol: JWYL7_1462
gene_biotype: protein_coding
description:
  Fe(3+)-transporting ATPase; PFAM: ABC transporter related protein, Transport-associated OB domain-containing protein; KEGG: ABC transporter-like protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.


ensembl_gene_id: JWYL7_1463
symbol: JWYL7_1463
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: fetC, iron (III) ABC transporter permease.


ensembl_gene_id: JWYL7_1466
symbol: JWYL7_1466
gene_biotype: protein_coding
description:
  SMART: diacylglycerol kinase catalytic region; TIGRFAM: Conserved hypothetical protein CHP00147; KEGG: dagK, diacylglycerol kinase DagK; PFAM: diacylglycerol kinase catalytic region.


ensembl_gene_id: JWYL7_1467
symbol: JWYL7_1467
gene_biotype: protein_coding
description:
  PFAM: cell wall hydrolase SleB, Peptidoglycan-binding lysin domain-containing protein, copper amine oxidase-like domain-containing protein; KEGG: cell wall hydrolase SleB; SMART: Peptidoglycan-binding LysM.


ensembl_gene_id: JWYL7_1468
symbol: JWYL7_1468
gene_biotype: protein_coding
description:
  KEGG: sacK, fructokinase; PFAM: PfkB domain protein; Belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: JWYL7_1469
symbol: JWYL7_1469
gene_biotype: protein_coding
description:
  PFAM: phosphotransferase system EIIC, Phosphotransferase system EIIB/cysteine, phosphorylation site; KEGG: sacP, PTS system sucrose-specific transporter subunit IIBC.


ensembl_gene_id: JWYL7_1470
symbol: JWYL7_1470
gene_biotype: protein_coding
description:
  Transcriptional antiterminator, BglG; PFAM: PRD domain protein, CAT RNA-binding domain protein; KEGG: sacT, transcriptional antiterminator of sucrose metabolism; SMART: CAT RNA-binding domain protein.


ensembl_gene_id: JWYL7_1471
symbol: JWYL7_1471
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF395 YeeE/YedE; TIGRFAM: Putative selenium metabolism protein, YedE family; KEGG: hypothetical protein.


ensembl_gene_id: JWYL7_1472
symbol: JWYL7_1472
gene_biotype: protein_coding
description:
  PFAM: SirA-like domain-containing protein; KEGG: SirA family protein; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: JWYL7_1474
symbol: JWYL7_1474
gene_biotype: protein_coding
description:
  4-hydroxybutyrate dehydrogenase; KEGG: hypothetical protein; PFAM: iron-containing alcohol dehydrogenase.


ensembl_gene_id: JWYL7_1475
symbol: JWYL7_1475
gene_biotype: protein_coding
description:
  Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.


ensembl_gene_id: JWYL7_1476
symbol: JWYL7_1476
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, RpoE, ECF subfamily; PFAM: sigma-70 region 2 domain protein, Sigma-70 region 4 type 2; KEGG: ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family.


ensembl_gene_id: JWYL7_1479
symbol: JWYL7_1479
gene_biotype: protein_coding
description:
  PFAM: 4Fe-4S ferredoxin, iron-sulpur binding domain-containing protein; KEGG: 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.


ensembl_gene_id: JWYL7_1486
symbol: JWYL7_1486
gene_biotype: protein_coding
description:
  PTS system, glucose-like IIB subunint; KEGG: PTS system glucose subfamily transporter subunit IIA; PFAM: phosphotransferase system EIIC, Phosphotransferase system EIIB/cysteine, phosphorylation site; TIGRFAM: PTS system, glucose-like IIB subunint.


ensembl_gene_id: JWYL7_1487
symbol: JWYL7_1487
gene_biotype: protein_coding
description:
  CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type; TIGRFAM: CoA-substrate-specific enzyme activase; KEGG: putative CoA-substrate-specific enzyme activase.


ensembl_gene_id: JWYL7_1488
symbol: JWYL7_1488
gene_biotype: protein_coding
description:
  KEGG: 2-hydroxyglutaryl-CoA dehydratase subunit D; PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component.


ensembl_gene_id: JWYL7_1493
symbol: JWYL7_1493
gene_biotype: protein_coding
description:
  TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: ECF subfamily RNA polymerase sigma-24 subunit; PFAM: Sigma-70 region 4 type 2, sigma-70 region 2 domain protein.


ensembl_gene_id: JWYL7_1495
symbol: JWYL7_1495
gene_biotype: protein_coding
description:
  PTS system IIBC component protein; PFAM: phosphotransferase system EIIC, Phosphotransferase system EIIB/cysteine, phosphorylation site; KEGG: integral membrane protein; TIGRFAM: PTS system IIBC component protein, PTS system, glucose-like IIB subunint.


ensembl_gene_id: JWYL7_1496
symbol: JWYL7_1496
gene_biotype: protein_coding
description:
  Oligo-1,6-glucosidase; KEGG: alpha amylase; SMART: alpha amylase catalytic sub domain-containing protein; PFAM: alpha amylase catalytic region.


ensembl_gene_id: JWYL7_1498
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase msrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: JWYL7_1499
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: JWYL7_1500
symbol: JWYL7_1500
gene_biotype: protein_coding
description:
  KEGG: transposase; TIGRFAM: transposase, IS605 OrfB family; PFAM: transposase IS891/IS1136/IS1341 family, transposase IS605 OrfB, Transposase, helix-turn-helix domain-containing protein.


ensembl_gene_id: JWYL7_1501
symbol: JWYL7_1501
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, MerR family; KEGG: transposon, resolvase; PFAM: Resolvase domain-containing protein; SMART: Resolvase domain-containing protein, regulatory protein MerR.


ensembl_gene_id: JWYL7_1502
symbol: sucC
gene_biotype: protein_coding
description:
  Succinyl-CoA ligase (ADP-forming) subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: JWYL7_1503
symbol: JWYL7_1503
gene_biotype: protein_coding
description:
  PFAM: YidE/YbjL duplication domain-containing protein; TIGRFAM: YidE/YbjL duplication; KEGG: YidE/YbjL duplication.


ensembl_gene_id: JWYL7_1507
symbol: JWYL7_1507
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: hypothetical protein.


ensembl_gene_id: JWYL7_1508
symbol: JWYL7_1508
gene_biotype: protein_coding
description:
  Glutamate synthase (NADPH); PFAM: Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain; KEGG: Formate dehydrogenase-O, major subunit.


ensembl_gene_id: JWYL7_1519
symbol: JWYL7_1519
gene_biotype: protein_coding
description:
  KEGG: transposase IS204/IS1001/IS1096/IS1165 family protein; PFAM: transposase IS204/IS1001/IS1096/IS1165 family protein.


ensembl_gene_id: JWYL7_1521
symbol: JWYL7_1521
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmA family; PFAM: (Uracil-5)-methyltransferase, deoxyribonuclease/rho motif-related TRAM; TIGRFAM: RNA methyltransferase, TrmA family; KEGG: RNA methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: JWYL7_1524
symbol: JWYL7_1524
gene_biotype: protein_coding
description:
  PFAM: sodium:neurotransmitter symporter; KEGG: transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.


ensembl_gene_id: JWYL7_1525
symbol: JWYL7_1525
gene_biotype: protein_coding
description:
  TIGRFAM: transposase, IS605 OrfB family; KEGG: transposase; PFAM: transposase IS891/IS1136/IS1341 family, transposase IS605 OrfB, Transposase, helix-turn-helix domain-containing protein.


ensembl_gene_id: JWYL7_1527
symbol: JWYL7_1527
gene_biotype: protein_coding
description:
  KEGG: pyk, pyruvate kinase; PFAM: Pyruvate kinase barrel, Pyruvate kinase -like protein, PEP-utilising protein mobile region; TIGRFAM: pyruvate kinase; Belongs to the pyruvate kinase family.


ensembl_gene_id: JWYL7_1528
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: JWYL7_1531
symbol: JWYL7_1531
gene_biotype: protein_coding
description:
  TIGRFAM: DNA polymerase III, alpha subunit; KEGG: dnaE, DNA polymerase III DnaE; PFAM: DNA polymerase III alpha subunit, PHP domain protein; SMART: phosphoesterase PHP domain protein.


ensembl_gene_id: JWYL7_1532
symbol: JWYL7_1532
gene_biotype: protein_coding
description:
  PFAM: phosphoryl transfer system HPr; KEGG: putative phosphocarrier protein; TIGRFAM: phosphocarrier, HPr family.


ensembl_gene_id: JWYL7_1535
symbol: JWYL7_1535
gene_biotype: protein_coding
description:
  Putative protein family UPF0052; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.


ensembl_gene_id: JWYL7_1539
symbol: JWYL7_1539
gene_biotype: protein_coding
description:
  SMART: chemotaxis sensory transducer, histidine kinase HAMP region domain protein; KEGG: methyl-accepting chemotaxis sensory transducer with Cache sensor; PFAM: chemotaxis sensory transducer, histidine kinase HAMP region domain protein, Cache domain protein.


ensembl_gene_id: JWYL7_1540
symbol: JWYL7_1540
gene_biotype: protein_coding
description:
  Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); KEGG: PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein; SMART: EAL domain-containing protein, GGDEF domain containing protein, PAS domain containing protein; TIGRFAM: diguanylate cyclase, PAS sensor protein; PFAM: EAL domain-containing protein, PAS domain containing protein, GGDEF domain containing protein.


ensembl_gene_id: JWYL7_1542
symbol: JWYL7_1542
gene_biotype: protein_coding
description:
  SMART: chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; KEGG: methyl-accepting chemotaxis protein.


ensembl_gene_id: JWYL7_1543
symbol: JWYL7_1543
gene_biotype: protein_coding
description:
  Cache domain containing protein; KEGG: methyl-accepting chemotaxis sensory transducer with Cache sensor; PFAM: Cache domain protein.


ensembl_gene_id: JWYL7_1544
symbol: JWYL7_1544
gene_biotype: protein_coding
description:
  (FeFe)-hydrogenase H-cluster maturation GTPase HydF; PFAM: GTP1/OBG protein; KEGG: small GTP-binding protein; TIGRFAM: [FeFe]-hydrogenase H-cluster maturation GTPase HydF, small GTP-binding protein.


ensembl_gene_id: JWYL7_1545
symbol: JWYL7_1545
gene_biotype: protein_coding
description:
  (FeFe)-hydrogenase maturation HydE, radical SAM; PFAM: Radical SAM domain protein, Protein of unknown function DUF3343; TIGRFAM: [FeFe]-hydrogenase maturation HydE, radical SAM; SMART: Elongator protein 3/MiaB/NifB, biotin and thiamin synthesis associated protein; KEGG: radical SAM domain-containing protein.


ensembl_gene_id: JWYL7_1546
symbol: JWYL7_1546
gene_biotype: protein_coding
description:
  (FeFe)-hydrogenase maturation HydG, radical SAM; PFAM: biotin and thiamin synthesis associated protein, Radical SAM domain protein; SMART: biotin and thiamin synthesis associated protein, Elongator protein 3/MiaB/NifB; TIGRFAM: [FeFe]-hydrogenase maturation HydG, radical SAM; KEGG: thiH, thiamine biosynthesis protein ThiH.


ensembl_gene_id: JWYL7_1547
symbol: JWYL7_1547
gene_biotype: protein_coding
description:
  (FeFe)-hydrogenase system regulator; KEGG: hypothetical protein; TIGRFAM: [FeFe]-hydrogenase system regulator TM1266.


ensembl_gene_id: JWYL7_1548
symbol: JWYL7_1548
gene_biotype: protein_coding
description:
  Hydrogenase, Fe-only; SMART: iron hydrogenase small subunit, NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein; TIGRFAM: hydrogenase, Fe-only; KEGG: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein, iron hydrogenase small subunit, NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein.


ensembl_gene_id: JWYL7_1549
symbol: JWYL7_1549
gene_biotype: protein_coding
description:
  NADH dehydrogenase (quinone); KEGG: nuoF2, NADH-quinone oxidoreductase subunit F 2; SMART: NADH ubiquinone oxidoreductase, F subunit, iron sulfur binding protein; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit, NADH dehydrogenase (ubiquinone) 24 kDa subunit, 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein, NADH ubiquinone oxidoreductase, F subunit, iron sulfur binding protein, Soluble ligand binding domain-containing protein.


ensembl_gene_id: JWYL7_1550
symbol: JWYL7_1550
gene_biotype: protein_coding
description:
  PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: NADH dehydrogenase (ubiquinone), 24 kDa subunit.


ensembl_gene_id: JWYL7_1554
symbol: hprK
gene_biotype: protein_coding
description:
  HPr kinase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (gluc [...]


ensembl_gene_id: JWYL7_1555
symbol: uvrC
gene_biotype: protein_coding
description:
  UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: JWYL7_1558
symbol: JWYL7_1558
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, RpoE, ECF subfamily; KEGG: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein, sigma-70 region 2 domain protein; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: JWYL7_1559
symbol: JWYL7_1559
gene_biotype: protein_coding
description:
  PFAM: BCCT transporter; KEGG: opuD, glycine betaine transporter; TIGRFAM: choline/carnitine/betaine transporter; Belongs to the BCCT transporter (TC 2.A.15) family.


ensembl_gene_id: JWYL7_1560
symbol: JWYL7_1560
gene_biotype: protein_coding
description:
  TIGRFAM: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family; KEGG: glycine/betaine/sarcosine/D-proline reductase family selenoprotein B.


ensembl_gene_id: JWYL7_1561
symbol: JWYL7_1561
gene_biotype: protein_coding
description:
  KEGG: betaine reductase complex component B subunit gamma; TIGRFAM: selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family; PFAM: Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase.


ensembl_gene_id: JWYL7_1562
symbol: JWYL7_1562
gene_biotype: protein_coding
description:
  PFAM: Glycine/sarcosine/betaine reductase complex protein B alpha and beta subunits; KEGG: grdI, betaine reductase complex component subunit B alpha (selenoprotein pb alpha).


ensembl_gene_id: JWYL7_1565
symbol: uvrA
gene_biotype: protein_coding
description:
  UvrABC system protein A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: JWYL7_1566
symbol: uvrB
gene_biotype: protein_coding
description:
  UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...]


ensembl_gene_id: JWYL7_1567
symbol: JWYL7_1567
gene_biotype: protein_coding
description:
  KEGG: TIGR00268 family protein; TIGRFAM: Conserved hypothetical protein CHP00268; PFAM: NAD/GMP synthase.


ensembl_gene_id: JWYL7_1568
symbol: JWYL7_1568
gene_biotype: protein_coding
description:
  PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: thiF2, molybdopterin/thiamine biosynthesis protein ThiF.


ensembl_gene_id: JWYL7_1569
symbol: JWYL7_1569
gene_biotype: protein_coding
description:
  Transcriptional regulator, Fis family; KEGG: sigma-54-dependent transcriptional regulator; PFAM: helix-turn-helix Fis-type.


ensembl_gene_id: JWYL7_1570
symbol: JWYL7_1570
gene_biotype: protein_coding
description:
  KEGG: carboxyl-terminal protease; SMART: peptidase S41, PDZ/DHR/GLGF domain protein; TIGRFAM: carboxyl-terminal protease; PFAM: peptidase S41, PDZ/DHR/GLGF domain protein; Belongs to the peptidase S41A family.


ensembl_gene_id: JWYL7_1572
symbol: JWYL7_1572
gene_biotype: protein_coding
description:
  Protein of unknown function DUF214; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: JWYL7_1573
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: JWYL7_1574
symbol: JWYL7_1574
gene_biotype: protein_coding
description:
  KEGG: 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.


ensembl_gene_id: JWYL7_1577
symbol: JWYL7_1577
gene_biotype: protein_coding
description:
  Glycosyl transferase, WecB/TagA/CpsF family; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.


ensembl_gene_id: JWYL7_1578
symbol: JWYL7_1578
gene_biotype: protein_coding
description:
  TIGRFAM: nucleotide sugar dehydrogenase; KEGG: capsular polysaccharide biosynthesis protein Cap5O; PFAM: UDP-glucose/GDP-mannose dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase dimerization, UDP-glucose/GDP-mannose dehydrogenase; SMART: UDP-glucose/GDP-mannose dehydrogenase.


ensembl_gene_id: JWYL7_1580
symbol: JWYL7_1580
gene_biotype: protein_coding
description:
  SpoIID/LytB domain protein; PFAM: Stage II sporulation protein D, cell wall binding repeat 2-containing protein, Two component regulator three Y domain-containing protein; TIGRFAM: SpoIID/LytB domain protein; KEGG: SpoIID/LytB domain-containing protein.


ensembl_gene_id: JWYL7_1581
symbol: JWYL7_1581
gene_biotype: protein_coding
description:
  PFAM: cell wall hydrolase/autolysin, cell wall binding repeat 2-containing protein; KEGG: putative N-acetylmuramoyl-L-alanine amidase; SMART: cell wall hydrolase/autolysin.


ensembl_gene_id: JWYL7_1582
symbol: JWYL7_1582
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; SMART: Transketolase central region; KEGG: tkt', transketolase; PFAM: Transketolase central region, Transketolase domain-containing protein.


ensembl_gene_id: JWYL7_1583
symbol: JWYL7_1583
gene_biotype: protein_coding
description:
  PFAM: Transketolase domain-containing protein; KEGG: transketolase, thiamine disphosphate-binding subunit.


ensembl_gene_id: JWYL7_1584
symbol: JWYL7_1584
gene_biotype: protein_coding
description:
  PFAM: Protein of unknown function DUF2179, protein of unknown function DUF161; KEGG: hypothetical protein.


ensembl_gene_id: JWYL7_1588
symbol: JWYL7_1588
gene_biotype: protein_coding
description:
  Transcriptional modulator of MazE/toxin, MazF; Toxic component of a type II toxin-antitoxin (TA) system.


ensembl_gene_id: JWYL7_1589
symbol: JWYL7_1589
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, CopG family; PFAM: CopG-like domain-containing protein DNA-binding protein; KEGG: CopG family transcriptional regulator.


ensembl_gene_id: JWYL7_1590
symbol: JWYL7_1590
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: JWYL7_1592
symbol: JWYL7_1592
gene_biotype: protein_coding
description:
  SMART: CBS domain containing protein; PFAM: CBS domain containing protein; KEGG: hypothetical protein.


ensembl_gene_id: JWYL7_1593
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-(acyl-carrier-protein) synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: JWYL7_1596
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase epsilon chain; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: JWYL7_1597
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: JWYL7_1598
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: JWYL7_1599
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: JWYL7_1600
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: JWYL7_1601
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: JWYL7_1602
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: JWYL7_1603
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: JWYL7_1606
symbol: JWYL7_1606
gene_biotype: protein_coding
description:
  TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: rffE, UDP-N-acetyl glucosamine-2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: JWYL7_1609
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyl transferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: JWYL7_1610
symbol: JWYL7_1610
gene_biotype: protein_coding
description:
  Sugar-phosphate isomerase, RpiB/LacA/LacB family; KEGG: rpiB, ribose 5-phosphate isomerase b/allose 6-phosphate isomerase; TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family, ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase.


ensembl_gene_id: JWYL7_1612
symbol: JWYL7_1612
gene_biotype: protein_coding
description:
  Sua5/YciO/YrdC/YwlC family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: JWYL7_1614
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: JWYL7_1615
symbol: prmC
gene_biotype: protein_coding
description:
  Protein-(glutamine-N5) methyltransferase, release factor-specific; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: JWYL7_1619
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: JWYL7_1620
symbol: JWYL7_1620
gene_biotype: protein_coding
description:
  Fructose-1,6-bisphosphatase, class II; KEGG: glpX, fructose 1,6-bisphosphatase II; TIGRFAM: fructose-1,6-bisphosphatase, class II; PFAM: GlpX family protein.


ensembl_gene_id: JWYL7_1621
symbol: JWYL7_1621
gene_biotype: protein_coding
description:
  TIGRFAM: fructose-1,6-bisphosphatase, class II; PFAM: GlpX family protein; KEGG: glpX, fructose 1,6-bisphosphatase II.


ensembl_gene_id: JWYL7_1622
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: JWYL7_1624
symbol: JWYL7_1624
gene_biotype: protein_coding
description:
  PFAM: acriflavin resistance protein; KEGG: acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: JWYL7_1625
symbol: JWYL7_1625
gene_biotype: protein_coding
description:
  KEGG: RND family efflux transporter, MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: JWYL7_1626
symbol: JWYL7_1626
gene_biotype: protein_coding
description:
  TIGRFAM: diguanylate cyclase; SMART: GGDEF domain containing protein; KEGG: diguanylate cyclase; PFAM: GGDEF domain containing protein.


ensembl_gene_id: JWYL7_1628
symbol: JWYL7_1628
gene_biotype: protein_coding
description:
  TIGRFAM: oligoendopeptidase F; KEGG: oligoendopeptidase f; PFAM: peptidase M3A and M3B thimet/oligopeptidase F, Oligopeptidase F.


ensembl_gene_id: JWYL7_1630
symbol: JWYL7_1630
gene_biotype: protein_coding
description:
  PFAM: GGDEF domain containing protein, metal-dependent phosphohydrolase HD sub domain-containing protein; TIGRFAM: diguanylate cyclase; SMART: GGDEF domain containing protein, metal-dependent phosphohydrolase HD region, GAF domain protein; KEGG: diguanylate cyclase and metal dependent phosphohydrolase.


ensembl_gene_id: JWYL7_1631
symbol: JWYL7_1631
gene_biotype: protein_coding
description:
  KEGG: N-acetylmuramoyl-L-alanine amidase; PFAM: transglutaminase domain-containing protein, cell wall binding repeat 2-containing protein; SMART: transglutaminase domain-containing protein.


ensembl_gene_id: JWYL7_1636
symbol: JWYL7_1636
gene_biotype: protein_coding
description:
  TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: hypothetical protein; PFAM: sigma-70 region 2 domain protein.


ensembl_gene_id: JWYL7_1638
symbol: JWYL7_1638
gene_biotype: protein_coding
description:
  PFAM: sodium:neurotransmitter symporter; KEGG: tnaT, sodium- and chloride-dependent transporter, TnaT; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.


ensembl_gene_id: JWYL7_1639
symbol: tnaA
gene_biotype: protein_coding
description:
  KEGG: tnaA, tryptophanase; HAMAP : Tryptophanase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase.


ensembl_gene_id: JWYL7_1640
symbol: JWYL7_1640
gene_biotype: protein_coding
description:
  KEGG: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase.


ensembl_gene_id: JWYL7_1641
symbol: murJ
gene_biotype: protein_coding
description:
  Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: JWYL7_1642
symbol: JWYL7_1642
gene_biotype: protein_coding
description:
  Nucleotide sugar dehydrogenase; SMART: UDP-glucose/GDP-mannose dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase dimerization, UDP-glucose/GDP-mannose dehydrogenase; KEGG: nucleotide sugar dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase.


ensembl_gene_id: JWYL7_1645
symbol: JWYL7_1645
gene_biotype: protein_coding
description:
  KEGG: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; overlaps another CDS with the same product name.


ensembl_gene_id: JWYL7_1646
symbol: JWYL7_1646
gene_biotype: protein_coding
description:
  PFAM: virulence factor MVIN family protein; KEGG: Proposed peptidoglycan lipid II flippase MurJ; overlaps another CDS with the same product name.


ensembl_gene_id: JWYL7_1650
symbol: JWYL7_1650
gene_biotype: protein_coding
description:
  TIGRFAM: nucleotide sugar dehydrogenase; KEGG: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase dimerization, UDP-glucose/GDP-mannose dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase; SMART: UDP-glucose/GDP-mannose dehydrogenase.


ensembl_gene_id: JWYL7_1654
symbol: JWYL7_1654
gene_biotype: protein_coding
description:
  KEGG: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase, UDP-glucose 4-epimerase C-terminal domain; TIGRFAM: UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: JWYL7_1655
symbol: JWYL7_1655
gene_biotype: protein_coding
description:
  KEGG: glycosyltransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase.


ensembl_gene_id: JWYL7_1657
symbol: JWYL7_1657
gene_biotype: protein_coding
description:
  Protein-tyrosine-phosphatase; PFAM: PHP domain protein; KEGG: capsular polysaccharide biosynthesis protein.


ensembl_gene_id: JWYL7_1661
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: JWYL7_1666
symbol: JWYL7_1666
gene_biotype: protein_coding
description:
  TIGRFAM: stage II sporulation protein E; KEGG: spoIIE, phosphoprotein phosphatase; PFAM: protein phosphatase 2C domain protein; SMART: protein phosphatase 2C domain protein.


ensembl_gene_id: JWYL7_1669
symbol: JWYL7_1669
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; TIGRFAM: spore cortex biosynthesis protein YabQ; PFAM: Spore cortex biosynthesis protein, YabQ-like protein.


ensembl_gene_id: JWYL7_1671
symbol: JWYL7_1671
gene_biotype: protein_coding
description:
  SMART: RNA-binding S4 domain protein; KEGG: RNA-binding protein; PFAM: RNA-binding S4 domain protein.


ensembl_gene_id: JWYL7_1672
symbol: JWYL7_1672
gene_biotype: protein_coding
description:
  Histone family protein DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: JWYL7_1673
symbol: JWYL7_1673
gene_biotype: protein_coding
description:
  MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase, Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: bifunctional tetrapyrrole (Corrin/Porphyrin) methylase/nucleoside triphosphate pyrophosphohydrolase; TIGRFAM: MazG family protein.


ensembl_gene_id: JWYL7_1675
symbol: JWYL7_1675
gene_biotype: protein_coding
description:
  Transcriptional regulator, AbrB family; SMART: SpoVT/AbrB domain-containing protein; TIGRFAM: stage V sporulation protein T, transcriptional regulator, AbrB family; KEGG: stage V sporulation protein T; PFAM: SpoVT/AbrB domain-containing protein.


ensembl_gene_id: JWYL7_1677
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: JWYL7_1678
symbol: pth
gene_biotype: protein_coding
description:
  Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: JWYL7_1679
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: JWYL7_1680
symbol: glmU
gene_biotype: protein_coding
description:
  Bifunctional protein glmU; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: JWYL7_1682
symbol: JWYL7_1682
gene_biotype: protein_coding
description:
  PFAM: purine repressor, phosphoribosyltransferase; TIGRFAM: pur operon repressor; KEGG: pur operon repressor.


ensembl_gene_id: JWYL7_1685
symbol: JWYL7_1685
gene_biotype: protein_coding
description:
  PFAM: Orn/Lys/Arg decarboxylase major region, Orn/Lys/Arg decarboxylase domain protein; KEGG: Orn/Lys/Arg decarboxylase, major region.


ensembl_gene_id: JWYL7_1686
symbol: JWYL7_1686
gene_biotype: protein_coding
description:
  KEGG: cation efflux protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: JWYL7_1687
symbol: JWYL7_1687
gene_biotype: protein_coding
description:
  Peptidase T-like protein; PFAM: peptidase M20, peptidase dimerization domain protein; TIGRFAM: peptidase T-like protein; KEGG: peptidase T-like protein.


ensembl_gene_id: JWYL7_1688
symbol: JWYL7_1688
gene_biotype: protein_coding
description:
  Putative cache sensor protein; SMART: histidine kinase A domain protein; PFAM: histidine kinase A domain protein, Cache domain protein; KEGG: multi-sensor signal transduction histidine kinase.


ensembl_gene_id: JWYL7_1690
symbol: rsmA
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: JWYL7_1691
symbol: rnmV
gene_biotype: protein_coding
description:
  Primase-related protein; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.


ensembl_gene_id: JWYL7_1692
symbol: JWYL7_1692
gene_biotype: protein_coding
description:
  PFAM: G5 domain protein, 3D domain-containing protein, protein of unknown function DUF348; KEGG: hypothetical protein.


ensembl_gene_id: JWYL7_1693
symbol: JWYL7_1693
gene_biotype: protein_coding
description:
  TIGRFAM: transposase, IS605 OrfB family; KEGG: transposase; PFAM: transposase IS605 OrfB, transposase IS891/IS1136/IS1341 family, Transposase, helix-turn-helix domain-containing protein.


ensembl_gene_id: JWYL7_1694
symbol: JWYL7_1694
gene_biotype: protein_coding
description:
  Hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; TIGRFAM: hydrolase, TatD family; KEGG: deoxyribonuclease.


ensembl_gene_id: JWYL7_1695
symbol: metG
gene_biotype: protein_coding
description:
  Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: JWYL7_1696
symbol: JWYL7_1696
gene_biotype: protein_coding
description:
  Phospholipase C/P1 nuclease; KEGG: phospholipase C zinc-binding protein; PFAM: phospholipase C/P1 nuclease; SMART: phospholipase C zinc-binding protein.


ensembl_gene_id: JWYL7_1702
symbol: JWYL7_1702
gene_biotype: protein_coding
description:
  TIGRFAM: 2,3-diketo-5-methylthio-1-phosphopentane phosphatase, HAD-superfamily hydrolase, subfamily IB (PSPase-like); KEGG: HAD-superfamily hydrolase; PFAM: Phosphatase PHOSPHO-type.


ensembl_gene_id: JWYL7_1703
symbol: JWYL7_1703
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: JWYL7_1704
symbol: JWYL7_1704
gene_biotype: protein_coding
description:
  HAMAP : Small, acid-soluble spore protein H; KEGG: small acid-soluble spore protein, H-type; PFAM: small acid-soluble spore H family protein; TIGRFAM: small acid-soluble spore protein, H-type.


ensembl_gene_id: JWYL7_1706
symbol: JWYL7_1706
gene_biotype: protein_coding
description:
  SMART: NurA domain-containing protein; KEGG: NurA domain-containing protein; PFAM: NurA domain-containing protein.


ensembl_gene_id: JWYL7_1707
symbol: JWYL7_1707
gene_biotype: protein_coding
description:
  Transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein; SMART: SpoVT/AbrB domain-containing protein; TIGRFAM: transcriptional regulator, AbrB family; KEGG: transcriptional regulator, AbrB family.


ensembl_gene_id: JWYL7_1708
symbol: rsmI
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: JWYL7_1713
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: JWYL7_1714
symbol: JWYL7_1714
gene_biotype: protein_coding
description:
  KEGG: Orn/Lys/Arg decarboxylase, major region; PFAM: Orn/Lys/Arg decarboxylase major region, Orn/Lys/Arg decarboxylase domain protein.


ensembl_gene_id: JWYL7_1717
symbol: JWYL7_1717
gene_biotype: protein_coding
description:
  KEGG: glycogen debranching protein; TIGRFAM: glycogen debranching enzyme; PFAM: Amylo-alpha-16-glucosidase, Glycogen debranching enzyme, N-terminal.


ensembl_gene_id: JWYL7_1722
symbol: JWYL7_1722
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, PucR family; KEGG: hypothetical protein; PFAM: PucR C-terminal helix-turn-helix domain.


ensembl_gene_id: JWYL7_1723
symbol: JWYL7_1723
gene_biotype: protein_coding
description:
  KEGG: ABC transporter-like protein; SMART: AAA ATPase; PFAM: ABC transporter related protein, TOBE domain-containing protein.


ensembl_gene_id: JWYL7_1724
symbol: JWYL7_1724
gene_biotype: protein_coding
description:
  Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.


ensembl_gene_id: JWYL7_1725
symbol: JWYL7_1725
gene_biotype: protein_coding
description:
  TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; PFAM: ATP-cone domain protein; KEGG: anaerobic ribonucleoside triphosphate reductase.


ensembl_gene_id: JWYL7_1727
symbol: JWYL7_1727
gene_biotype: protein_coding
description:
  Diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: diguanylate cyclase; TIGRFAM: diguanylate cyclase; SMART: GGDEF domain containing protein.


ensembl_gene_id: JWYL7_1729
symbol: JWYL7_1729
gene_biotype: protein_coding
description:
  Putative protein family UPF0489; KEGG: hypothetical protein; PFAM: Uncharacterized protein family UPF0489.


ensembl_gene_id: JWYL7_1731
symbol: JWYL7_1731
gene_biotype: protein_coding
description:
  TIGRFAM: amino acid carrier protein; KEGG: amino acid carrier protein; PFAM: sodium:alanine symporter.


ensembl_gene_id: JWYL7_1732
symbol: JWYL7_1732
gene_biotype: protein_coding
description:
  KEGG: putative SAM-dependent methyltransferase; PFAM: S-adenosylmethionine-dependent methyltransferase.


ensembl_gene_id: JWYL7_1733
symbol: JWYL7_1733
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: JWYL7_1734
symbol: JWYL7_1734
gene_biotype: protein_coding
description:
  KEGG: ribE, riboflavin synthase subunit alpha; PFAM: Lumazine-binding domain; TIGRFAM: riboflavin synthase, alpha subunit.


ensembl_gene_id: JWYL7_1735
symbol: ribBA
gene_biotype: protein_coding
description:
  3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: JWYL7_1736
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: JWYL7_1743
symbol: JWYL7_1743
gene_biotype: protein_coding
description:
  KEGG: spore germination protein; TIGRFAM: spore germination protein; PFAM: Spore germination protein.


ensembl_gene_id: JWYL7_1745
symbol: JWYL7_1745
gene_biotype: protein_coding
description:
  TIGRFAM: germination protein, Ger(x)C family; KEGG: Ger(x)C family germination protein; PFAM: spore germination B3 GerAC family protein.


ensembl_gene_id: JWYL7_1747
symbol: JWYL7_1747
gene_biotype: protein_coding
description:
  Diguanylate cyclase/phosphodiesterase; KEGG: hypothetical protein; PFAM: EAL domain-containing protein, GGDEF domain containing protein; SMART: EAL domain-containing protein, GGDEF domain containing protein.


ensembl_gene_id: JWYL7_1750
symbol: JWYL7_1750
gene_biotype: protein_coding
description:
  Iron-chelate-transporting ATPase; PFAM: ABC transporter related protein; KEGG: iron compound ABC transporter ATP-binding protein; SMART: AAA ATPase.


ensembl_gene_id: JWYL7_1751
symbol: JWYL7_1751
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, integral membrane subunit; KEGG: Fe3+-siderophore ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: JWYL7_1752
symbol: JWYL7_1752
gene_biotype: protein_coding
description:
  PFAM: ABC-type transporter, periplasmic subunit; KEGG: iron compound ABC transporter substrate-binding protein.


ensembl_gene_id: JWYL7_1758
symbol: JWYL7_1758
gene_biotype: protein_coding
description:
  Iron-chelate-transporting ATPase; PFAM: ABC transporter related protein; KEGG: ABC transporter ATP-binding protein; SMART: AAA ATPase.


ensembl_gene_id: JWYL7_1759
symbol: JWYL7_1759
gene_biotype: protein_coding
description:
  KEGG: transport system permease protein; PFAM: ABC-type transporter, integral membrane subunit; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: JWYL7_1760
symbol: JWYL7_1760
gene_biotype: protein_coding
description:
  KEGG: Fe3+-hydroxamate ABC transporter periplasmic protein; PFAM: ABC-type transporter, periplasmic subunit.


ensembl_gene_id: JWYL7_1761
symbol: JWYL7_1761
gene_biotype: protein_coding
description:
  Maltose-6'-phosphate glucosidase; PFAM: glycoside hydrolase family 4, Glycosyl hydrolase, family 4, C-terminal; KEGG: family 4 glycosyl hydrolase, alpha-galactosidase/6-phospho-beta-glucosidase.


ensembl_gene_id: JWYL7_1762
symbol: JWYL7_1762
gene_biotype: protein_coding
description:
  PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC, Phosphotransferase system EIIB/cysteine, phosphorylation site; KEGG: phosphotransferase system alpha-glucoside-specific IIBC component; TIGRFAM: PTS system, glucose-like IIB subunint.


ensembl_gene_id: JWYL7_1763
symbol: JWYL7_1763
gene_biotype: protein_coding
description:
  Transcriptional regulator, GntR family with UTRA sensor domain containing protein; PFAM: UbiC transcription regulator-associated domain-containing protein, regulatory protein GntR HTH; TIGRFAM: trehalose operon repressor; SMART: UbiC transcription regulator-associated domain-containing protein, regulatory protein GntR HTH; KEGG: treR, trehalose operon repressor.


ensembl_gene_id: JWYL7_1764
symbol: JWYL7_1764
gene_biotype: protein_coding
description:
  TIGRFAM: alpha,alpha-phosphotrehalase; KEGG: trehalose-6-phosphate hydrolase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain-containing protein.


ensembl_gene_id: JWYL7_1765
symbol: JWYL7_1765
gene_biotype: protein_coding
description:
  TIGRFAM: PTS system, trehalose-specific IIBC subunit, PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system EIIC, Phosphotransferase system EIIB/cysteine, phosphorylation site; KEGG: treP, PTS system trehalose-specific transporter subunit IIBC.


ensembl_gene_id: JWYL7_1768
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, ATPase subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: JWYL7_1769
symbol: JWYL7_1769
gene_biotype: protein_coding
description:
  TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; KEGG: phosphate ABC transporter permease; PFAM: ABC-type transporter, integral membrane subunit.


ensembl_gene_id: JWYL7_1770
symbol: JWYL7_1770
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, inner membrane subunit PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: JWYL7_1776
symbol: JWYL7_1776
gene_biotype: protein_coding
description:
  PFAM: heat shock protein Hsp20; KEGG: hsp18b, heat shock protein; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: JWYL7_1785
symbol: JWYL7_1785
gene_biotype: protein_coding
description:
  Putative transcriptional regulator; KEGG: divergent AAA domain family; PFAM: AAA-4 family protein, ATP-dependent DNA helicase RecG C-terminal domain.


ensembl_gene_id: JWYL7_1787
symbol: JWYL7_1787
gene_biotype: protein_coding
description:
  KEGG: IstB domain-containing protein ATP-binding protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase.


ensembl_gene_id: JWYL7_1796
symbol: JWYL7_1796
gene_biotype: protein_coding
description:
  SMART: Resolvase domain-containing protein; KEGG: putative site-specific recombinase; PFAM: Resolvase domain-containing protein.


ensembl_gene_id: JWYL7_1798
symbol: JWYL7_1798
gene_biotype: protein_coding
description:
  KEGG: resolvase domain-containing protein; PFAM: Resolvase domain-containing protein, Recombinase, Recombinase zinc beta ribbon domain; SMART: Resolvase domain-containing protein.


ensembl_gene_id: JWYL7_1799
symbol: rlmH
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: JWYL7_1802
symbol: JWYL7_1802
gene_biotype: protein_coding
description:
  PFAM: beta-lactamase domain protein; KEGG: metallo-beta-lactamase; SMART: beta-lactamase domain protein.


ensembl_gene_id: JWYL7_1803
symbol: JWYL7_1803
gene_biotype: protein_coding
description:
  PFAM: Peptidase M23, Peptidoglycan-binding lysin domain-containing protein, G5 domain protein; KEGG: peptidase M23B; SMART: Peptidoglycan-binding LysM.


ensembl_gene_id: JWYL7_1805
symbol: JWYL7_1805
gene_biotype: protein_coding
description:
  Primosome, DnaD subunit; KEGG: hypothetical protein; TIGRFAM: primosome, DnaD subunit; PFAM: DnaD and phage-associated region.


ensembl_gene_id: JWYL7_1806
symbol: JWYL7_1806
gene_biotype: protein_coding
description:
  SMART: AAA ATPase; KEGG: DNA replication protein DnaC; PFAM: IstB domain protein ATP-binding protein.


ensembl_gene_id: JWYL7_1807
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: JWYL7_1808
symbol: JWYL7_1808
gene_biotype: protein_coding
description:
  KEGG: hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP03980, redox-disulphide; PFAM: Domain of unknown function DUF1858.


ensembl_gene_id: JWYL7_1810
symbol: JWYL7_1810
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: JWYL7_1812
symbol: JWYL7_1812
gene_biotype: protein_coding
description:
  Phosphoesterase RecJ domain protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.


ensembl_gene_id: JWYL7_1815
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: JWYL7_1816
symbol: JWYL7_1816
gene_biotype: protein_coding
description:
  Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: JWYL7_1818
symbol: JWYL7_1818
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, GntR family; KEGG: amino acid aminotransferase; PFAM: aminotransferase class I and II.


ensembl_gene_id: JWYL7_1821
symbol: JWYL7_1821
gene_biotype: protein_coding
description:
  Selenium metabolism protein YedF; PFAM: SirA-like domain-containing protein, DsrE family protein; KEGG: hypothetical protein; TIGRFAM: selenium metabolism protein YedF; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: JWYL7_1824
symbol: JWYL7_1824
gene_biotype: protein_coding
description:
  KEGG: transcriptional regulator; PFAM: Tetratricopeptide repeat-containing protein, Tetratricopeptide TPR_2 repeat-containing protein; SMART: helix-turn-helix domain protein, Tetratricopeptide repeat-containing protein.


ensembl_gene_id: JWYL7_1825
symbol: JWYL7_1825
gene_biotype: protein_coding
description:
  TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V; KEGG: cysteine desulfurase.


ensembl_gene_id: JWYL7_1826
symbol: JWYL7_1826
gene_biotype: protein_coding
description:
  parB-like partition protein; SMART: ParB domain protein nuclease; TIGRFAM: parB-like partition protein; KEGG: stage 0 sporulation protein J; PFAM: ParB domain protein nuclease; Belongs to the ParB family.


ensembl_gene_id: JWYL7_1828
symbol: JWYL7_1828
gene_biotype: protein_coding
description:
  parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease; TIGRFAM: parB-like partition protein; KEGG: stage 0 sporulation protein; Belongs to the ParB family.


ensembl_gene_id: JWYL7_1829
symbol: rsmG
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: JWYL7_1830
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme mnmG; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: JWYL7_1831
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase mnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: JWYL7_1832
symbol: JWYL7_1832
gene_biotype: protein_coding
description:
  KEGG: putative RNA-binding protein; PFAM: single-stranded nucleic acid binding R3H domain-containing protein; SMART: single-stranded nucleic acid binding R3H domain-containing protein.


ensembl_gene_id: JWYL7_1833
symbol: JWYL7_1833
gene_biotype: protein_coding
description:
  PFAM: 60 kDa inner membrane insertion protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; KEGG: oxaAA, sec-independent factor for membrane protein insertion.


ensembl_gene_id: JWYL7_1834
symbol: JWYL7_1834
gene_biotype: protein_coding
description:
  UPF0161 protein yidD; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: JWYL7_1835
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: JWYL7_1836
symbol: rpmH
gene_biotype: protein_coding
description:
  PFAM: ribosomal protein L34; TIGRFAM: ribosomal protein L34; KEGG: rpmH, 50S ribosomal protein L34; HAMAP : 50S ribosomal protein L34; Belongs to the bacterial ribosomal protein bL34 family.


ensembl_gene_id: JWYL7_1837
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein dnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: JWYL7_1838
symbol: JWYL7_1838
gene_biotype: protein_coding
description:
  DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]


ensembl_gene_id: JWYL7_1840
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein recF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: JWYL7_1841
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase B subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: JWYL7_1842
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: JWYL7_1845
symbol: JWYL7_1845
gene_biotype: protein_coding
description:
  Anti-anti-sigma regulatory factor, SpoIIAA; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; TIGRFAM: anti-anti-sigma factor; KEGG: rsbV, anti sigma b factor antagonist rsbv; Belongs to the anti-sigma-factor antagonist family.


ensembl_gene_id: JWYL7_1847
symbol: JWYL7_1847
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 28 subunit, Sig B/F/G subfamily; PFAM: sigma-70 region 4 domain protein, sigma-70 region 2 domain protein, sigma-70 region 3 domain protein; KEGG: RinA family phage transcriptional regulator; TIGRFAM: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily, RNA polymerase sigma factor, sigma-70 family.


ensembl_gene_id: JWYL7_1850
symbol: JWYL7_1850
gene_biotype: protein_coding
description:
  Quinolinate synthetase complex, A subunit; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: JWYL7_1852
symbol: JWYL7_1852
gene_biotype: protein_coding
description:
  TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase, Quinolinate phosphoribosyl transferase domain-containing protein; KEGG: nadC, nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family.


ensembl_gene_id: JWYL7_1853
symbol: JWYL7_1853
gene_biotype: protein_coding
description:
  Phosphotransferase system EIIC; KEGG: regulatory protein (pfos/r); PFAM: phosphotransferase system EIIC.


ensembl_gene_id: JWYL7_1857
symbol: serS
gene_biotype: protein_coding
description:
  Seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: JWYL7_1858
symbol: tadA
gene_biotype: protein_coding
description:
  CMP/dCMP deaminase zinc-binding protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: JWYL7_1860
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III, subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: JWYL7_1861
symbol: JWYL7_1861
gene_biotype: protein_coding
description:
  UPF0133 protein ybaB; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: JWYL7_1862
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein recR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: JWYL7_1864
symbol: JWYL7_1864
gene_biotype: protein_coding
description:
  Monogalactosyldiacylglycerol synthase; KEGG: glycosyl transferase family protein; PFAM: Monogalactosyldiacylglycerol synthase, Glycosyltransferase 28 domain-containing protein.


ensembl_gene_id: JWYL7_1868
symbol: JWYL7_1868
gene_biotype: protein_coding
description:
  KEGG: nhaC, na+/h+ antiporter nhac; TIGRFAM: Na+/H+ antiporter NhaC; PFAM: Na+/H+ antiporter NhaC-like protein.


ensembl_gene_id: JWYL7_1873
symbol: JWYL7_1873
gene_biotype: protein_coding
description:
  KEGG: epsF, type II secretion pathway protein F; PFAM: Type II secretion system F domain-containing protein.


ensembl_gene_id: JWYL7_1874
symbol: JWYL7_1874
gene_biotype: protein_coding
description:
  TIGRFAM: twitching motility protein; SMART: AAA ATPase; KEGG: twitching motility protein; PFAM: type II secretion system protein E.


ensembl_gene_id: JWYL7_1875
symbol: JWYL7_1875
gene_biotype: protein_coding
description:
  SMART: AAA ATPase; PFAM: type II secretion system protein E, General secretory system II protein E domain protein; KEGG: type II secretion system protein E.


ensembl_gene_id: JWYL7_1882
symbol: JWYL7_1882
gene_biotype: protein_coding
description:
  Cobalbumin biosynthesis protein; KEGG: adenosylcobinamide-phosphate guanylyltransferase; PFAM: cobalbumin biosynthesis protein.


ensembl_gene_id: JWYL7_1884
symbol: JWYL7_1884
gene_biotype: protein_coding
description:
  KEGG: electron transfer flavoprotein subunit alpha/beta-like protein; PFAM: Electron transfer flavoprotein alpha/beta-subunit; SMART: Electron transfer flavoprotein alpha/beta-subunit.


ensembl_gene_id: JWYL7_1890
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: JWYL7_1891
symbol: JWYL7_1891
gene_biotype: protein_coding
description:
  SMART: Phosphoglycerate mutase; PFAM: Phosphoglycerate mutase; KEGG: cobalamin biosynthesis phosphoglycerate mutase.


ensembl_gene_id: JWYL7_1893
symbol: JWYL7_1893
gene_biotype: protein_coding
description:
  KEGG: iron dependent repressor; PFAM: Iron dependent repressor, N-terminal, iron dependent repressor; SMART: Iron dependent repressor, diptheria toxin type.


ensembl_gene_id: JWYL7_1894
symbol: JWYL7_1894
gene_biotype: protein_coding
description:
  FeoA family protein; KEGG: feoA, ferrous iron transporter FeoA; PFAM: FeoA family protein; SMART: FeoA family protein.


ensembl_gene_id: JWYL7_1895
symbol: JWYL7_1895
gene_biotype: protein_coding
description:
  PFAM: Ferrous iron transport protein B domain-containing protein; KEGG: feoB2, ferrous iron transport protein B.


ensembl_gene_id: JWYL7_1896
symbol: JWYL7_1896
gene_biotype: protein_coding
description:
  KEGG: GTP-binding protein HSR1-related; PFAM: nucleoside recognition domain protein, Ferrous iron transport B domain-containing protein.


ensembl_gene_id: JWYL7_1897
symbol: xpt
gene_biotype: protein_coding
description:
  Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.


ensembl_gene_id: JWYL7_1899
symbol: JWYL7_1899
gene_biotype: protein_coding
description:
  KEGG: DMT(drug/metabolite transporter) superfamily permease; PFAM: protein of unknown function DUF6 transmembrane.


ensembl_gene_id: JWYL7_1902
symbol: arcA
gene_biotype: protein_coding
description:
  Arginine deiminase; PFAM: amidinotransferase; KEGG: arcA, arginine deiminase; TIGRFAM: arginine deiminase; HAMAP : Arginine deiminase.


ensembl_gene_id: JWYL7_1903
symbol: JWYL7_1903
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: JWYL7_1904
symbol: JWYL7_1904
gene_biotype: protein_coding
description:
  TIGRFAM: carbamate kinase; KEGG: arcC, carbamate kinase; PFAM: aspartate/glutamate/uridylate kinase; Belongs to the carbamate kinase family.


ensembl_gene_id: JWYL7_1906
symbol: JWYL7_1906
gene_biotype: protein_coding
description:
  KEGG: SpoIID/LytB domain-containing protein; SMART: cell wall hydrolase/autolysin; PFAM: cell wall hydrolase/autolysin, Stage II sporulation protein D; TIGRFAM: SpoIID/LytB domain protein.


ensembl_gene_id: JWYL7_1908
symbol: JWYL7_1908
gene_biotype: protein_coding
description:
  SMART: Peptidoglycan-binding LysM; PFAM: Domain of unknown function DUF3794, Peptidoglycan-binding lysin domain-containing protein; KEGG: cell wall hydrolase.


ensembl_gene_id: JWYL7_1909
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: JWYL7_1910
symbol: JWYL7_1910
gene_biotype: protein_coding
description:
  KEGG: GntR family transcriptional regulator; SMART: GntR domain protein, regulatory protein GntR HTH; PFAM: GntR domain protein, regulatory protein GntR HTH.


ensembl_gene_id: JWYL7_1913
symbol: JWYL7_1913
gene_biotype: protein_coding
description:
  PFAM: Spore germination protein; TIGRFAM: spore germination protein; KEGG: spore germination protein.


ensembl_gene_id: JWYL7_1914
symbol: JWYL7_1914
gene_biotype: protein_coding
description:
  TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein; KEGG: spore germination B3 GerAC family protein.


ensembl_gene_id: JWYL7_1915
symbol: JWYL7_1915
gene_biotype: protein_coding
description:
  KEGG: stage II sporulation protein; TIGRFAM: stage II sporulation protein R; PFAM: Sporulation stage II protein R.


ensembl_gene_id: JWYL7_1916
symbol: JWYL7_1916
gene_biotype: protein_coding
description:
  TIGRFAM: spore cortex-lytic enzyme; PFAM: cell wall hydrolase SleB, Peptidoglycan-binding domain 1 protein; KEGG: spore cortex-lytic protein.


ensembl_gene_id: JWYL7_1918
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: JWYL7_1919
symbol: JWYL7_1919
gene_biotype: protein_coding
description:
  Transposase, IS605 OrfB family; PFAM: Transposase, helix-turn-helix domain-containing protein, transposase IS891/IS1136/IS1341 family; TIGRFAM: transposase, IS605 OrfB family; KEGG: transposase.


ensembl_gene_id: JWYL7_1922
symbol: JWYL7_1922
gene_biotype: protein_coding
description:
  PFAM: protein of unknown function DUF1427; TIGRFAM: XapX domain protein; KEGG: XapX domain-containing protein.


ensembl_gene_id: JWYL7_1923
symbol: JWYL7_1923
gene_biotype: protein_coding
description:
  KEGG: XapX domain-containing protein; PFAM: protein of unknown function DUF1427; TIGRFAM: XapX domain protein.


ensembl_gene_id: JWYL7_1924
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: JWYL7_1926
symbol: JWYL7_1926
gene_biotype: protein_coding
description:
  TIGRFAM: methylmalonyl-CoA mutase, large subunit; KEGG: methylmalonyl-CoA mutase; PFAM: methylmalonyl-CoA mutase.


ensembl_gene_id: JWYL7_1927
symbol: JWYL7_1927
gene_biotype: protein_coding
description:
  PFAM: cobalamin B12-binding domain protein; TIGRFAM: Methylmalonyl-CoA mutase domain-containing protein; KEGG: cobalamin B12-binding domain-containing protein.


ensembl_gene_id: JWYL7_1928
symbol: JWYL7_1928
gene_biotype: protein_coding
description:
  PFAM: ArgK protein; TIGRFAM: LAO/AO transport system ATPase; KEGG: argK, membrane ATPase/protein kinase; SMART: AAA ATPase.


ensembl_gene_id: JWYL7_1929
symbol: JWYL7_1929
gene_biotype: protein_coding
description:
  methylmalonyl-CoA epimerase; KEGG: glyoxalase/bleomycin resistance protein/dioxygenase; TIGRFAM: methylmalonyl-CoA epimerase.


ensembl_gene_id: JWYL7_1931
symbol: JWYL7_1931
gene_biotype: protein_coding
description:
  Sodium pump decarboxylase, gamma subunit; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the OadG family.


ensembl_gene_id: JWYL7_1932
symbol: JWYL7_1932
gene_biotype: protein_coding
description:
  KEGG: biotin/lipoyl attachment domain-containing protein; PFAM: biotin/lipoyl attachment domain-containing protein.


ensembl_gene_id: JWYL7_1933
symbol: JWYL7_1933
gene_biotype: protein_coding
description:
  Sodium ion-translocating decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).


ensembl_gene_id: JWYL7_1934
symbol: birA
gene_biotype: protein_coding
description:
  BirA bifunctional protein, biotin operon repressor and biotin/acetyl-CoA-carboxylase ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: JWYL7_1937
symbol: coaX
gene_biotype: protein_coding
description:
  Putative transcriptional acitvator, Baf family; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: JWYL7_1938
symbol: JWYL7_1938
gene_biotype: protein_coding
description:
  TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: JWYL7_1939
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: JWYL7_1940
symbol: lysS
gene_biotype: protein_coding
description:
  HAMAP : Lysyl-tRNA synthetase; KEGG: lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N), nucleic acid binding OB-fold tRNA/helicase-type; Belongs to the class-II aminoacyl-tRNA synthetase family.


