# geneInfo

ensembl_gene_id: SAMN02745206_00010
symbol: lolD
gene_biotype: protein_coding
description:
  Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.


ensembl_gene_id: SAMN02745206_00011
symbol: bamA
gene_biotype: protein_coding
description:
  Beta-barrel assembly machine subunit BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: SAMN02745206_00013
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: SAMN02745206_00014
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: SAMN02745206_00015
symbol: lpxA
gene_biotype: protein_coding
description:
  acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: SAMN02745206_00017
symbol: lpxB
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: SAMN02745206_00018
symbol: msbA
gene_biotype: protein_coding
description:
  ATP-binding cassette, subfamily B, MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.


ensembl_gene_id: SAMN02745206_00019
symbol: SHE28620.1
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: SAMN02745206_00022
symbol: SHE28704.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate--protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: SAMN02745206_00023
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: SAMN02745206_00049
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: SAMN02745206_00050
symbol: hisI
gene_biotype: protein_coding
description:
  phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.


ensembl_gene_id: SAMN02745206_00051
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase (homohexameric); Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.


ensembl_gene_id: SAMN02745206_00054
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: SAMN02745206_00061
symbol: cpoB
gene_biotype: protein_coding
description:
  Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.


ensembl_gene_id: SAMN02745206_00062
symbol: pal
gene_biotype: protein_coding
description:
  Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: SAMN02745206_00063
symbol: tolB
gene_biotype: protein_coding
description:
  TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: SAMN02745206_00069
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: SAMN02745206_00078
symbol: SHE30660.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.


ensembl_gene_id: SAMN02745206_00079
symbol: SHE30700.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: SAMN02745206_00080
symbol: pxpA
gene_biotype: protein_coding
description:
  UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.


ensembl_gene_id: SAMN02745206_00087
symbol: ftsH
gene_biotype: protein_coding
description:
  Membrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: SAMN02745206_00088
symbol: SHE31082.1
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: SAMN02745206_00089
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: SAMN02745206_00090
symbol: coaX
gene_biotype: protein_coding
description:
  Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: SAMN02745206_00094
symbol: queH
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: SAMN02745206_00106
symbol: nadE
gene_biotype: protein_coding
description:
  NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.


ensembl_gene_id: SAMN02745206_00114
symbol: ybeY
gene_biotype: protein_coding
description:
  Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: SAMN02745206_00115
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: SAMN02745206_00116
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-[acyl-carrier protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: SAMN02745206_00117
symbol: nnrE
gene_biotype: protein_coding
description:
  NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of bot [...]


ensembl_gene_id: SAMN02745206_00144
symbol: SHE33719.1
gene_biotype: protein_coding
description:
  Indolepyruvate ferredoxin oxidoreductase alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.


ensembl_gene_id: SAMN02745206_00146
symbol: SHE33834.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745206_00147
symbol: SHE33885.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 2, HAAT family /amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745206_00150
symbol: SHE34025.1
gene_biotype: protein_coding
description:
  phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).


ensembl_gene_id: SAMN02745206_00176
symbol: SHE35257.1
gene_biotype: protein_coding
description:
  Phosphopantothenate-cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: SAMN02745206_00184
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.


ensembl_gene_id: SAMN02745206_00196
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: SAMN02745206_00197
symbol: SHE36297.1
gene_biotype: protein_coding
description:
  NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.


ensembl_gene_id: SAMN02745206_00225
symbol: SHE40805.1
gene_biotype: protein_coding
description:
  Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SAMN02745206_00263
symbol: pdhA
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 component alpha subunit; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).


ensembl_gene_id: SAMN02745206_00283
symbol: SHE43893.1
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase AhpD family core domain-containing protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: SAMN02745206_00285
symbol: SHE43986.1
gene_biotype: protein_coding
description:
  Predicted polyphosphate-or ATP-dependent NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: SAMN02745206_00304
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: SAMN02745206_00319
symbol: SHE45485.1
gene_biotype: protein_coding
description:
  Haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.


ensembl_gene_id: SAMN02745206_00328
symbol: pepA
gene_biotype: protein_coding
description:
  Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: SAMN02745206_00330
symbol: serC
gene_biotype: protein_coding
description:
  Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.


ensembl_gene_id: SAMN02745206_00343
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: SAMN02745206_00344
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: SAMN02745206_00345
symbol: SHE46582.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase / D-alanyl-D-alanine-endopeptidase (penicillin-binding protein 4).


ensembl_gene_id: SAMN02745206_00349
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: SAMN02745206_00356
symbol: fbp
gene_biotype: protein_coding
description:
  Fructose-bisphosphate aldolase; Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3- phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P).


ensembl_gene_id: SAMN02745206_00357
symbol: SHE47103.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.


ensembl_gene_id: SAMN02745206_00360
symbol: rnfA
gene_biotype: protein_coding
description:
  Na+-transporting NADH:ubiquinone oxidoreductase subunit E; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: SAMN02745206_00363
symbol: SHE47333.1
gene_biotype: protein_coding
description:
  Na+-transporting NADH:ubiquinone oxidoreductase subunit B; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: SAMN02745206_00372
symbol: nth
gene_biotype: protein_coding
description:
  DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: SAMN02745206_00375
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: SAMN02745206_00381
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the i [...]


ensembl_gene_id: SAMN02745206_00384
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: SAMN02745206_00385
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (Guanine37-N(1)-) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: SAMN02745206_00387
symbol: rplS
gene_biotype: protein_coding
description:
  LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: SAMN02745206_00390
symbol: rsmI
gene_biotype: protein_coding
description:
  16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: SAMN02745206_00395
symbol: trmJ
gene_biotype: protein_coding
description:
  tRNA/rRNA methyltransferase; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: SAMN02745206_00404
symbol: SHE49092.1
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: SAMN02745206_00408
symbol: SHE49291.1
gene_biotype: protein_coding
description:
  RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN02745206_00409
symbol: SHE49333.1
gene_biotype: protein_coding
description:
  Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN02745206_00415
symbol: SHE49622.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains.


ensembl_gene_id: SAMN02745206_00424
symbol: SHE53625.1
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase (NADP); Belongs to the isocitrate and isopropylmalate dehydrogenases family.


ensembl_gene_id: SAMN02745206_00429
symbol: SHE53870.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-); Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745206_00430
symbol: SHE53921.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745206_00443
symbol: SHE54515.1
gene_biotype: protein_coding
description:
  4-aminobutyrate aminotransferase apoenzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN02745206_00461
symbol: surE
gene_biotype: protein_coding
description:
  5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: SAMN02745206_00470
symbol: SHE55722.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.


ensembl_gene_id: SAMN02745206_00479
symbol: SHE56067.1
gene_biotype: protein_coding
description:
  Metal-binding trascriptional regulator, contains putative Fe-S cluster and ArsR family DNA binding domain.


ensembl_gene_id: SAMN02745206_00486
symbol: SHE56362.1
gene_biotype: protein_coding
description:
  Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: SAMN02745206_00487
symbol: mtaD
gene_biotype: protein_coding
description:
  5-methylthioadenosine/S-adenosylhomocysteine deaminase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family.


ensembl_gene_id: SAMN02745206_00492
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: SAMN02745206_00494
symbol: nfo
gene_biotype: protein_coding
description:
  Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.


ensembl_gene_id: SAMN02745206_00510
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: SAMN02745206_00527
symbol: rplM
gene_biotype: protein_coding
description:
  LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: SAMN02745206_00529
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: SAMN02745206_00530
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: SAMN02745206_00536
symbol: SHE58586.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-); Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745206_00549
symbol: mltG
gene_biotype: protein_coding
description:
  UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: SAMN02745206_00552
symbol: SHE59362.1
gene_biotype: protein_coding
description:
  Trk system potassium uptake protein TrkH; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.


ensembl_gene_id: SAMN02745206_00559
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: SAMN02745206_00560
symbol: rlpA
gene_biotype: protein_coding
description:
  Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: SAMN02745206_00562
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: SAMN02745206_00567
symbol: SHE60124.1
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: SAMN02745206_00570
symbol: SHE60291.1
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: SAMN02745206_00577
symbol: SHE60713.1
gene_biotype: protein_coding
description:
  Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.


ensembl_gene_id: SAMN02745206_00580
symbol: SHE60886.1
gene_biotype: protein_coding
description:
  Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: SAMN02745206_00584
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: SAMN02745206_00585
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: SAMN02745206_00586
symbol: SHE61231.1
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: SAMN02745206_00587
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: SAMN02745206_00588
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: SAMN02745206_00597
symbol: flgH
gene_biotype: protein_coding
description:
  Flagellar L-ring protein precursor FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: SAMN02745206_00598
symbol: flgI
gene_biotype: protein_coding
description:
  Flagellar P-ring protein precursor FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: SAMN02745206_00604
symbol: SHE62216.1
gene_biotype: protein_coding
description:
  Flagellin FlgL; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: SAMN02745206_00609
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: SAMN02745206_00612
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: SAMN02745206_00613
symbol: SHE66121.1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN02745206_00614
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN02745206_00615
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: SAMN02745206_00617
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: SAMN02745206_00618
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: SAMN02745206_00619
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN02745206_00620
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: SAMN02745206_00629
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: SAMN02745206_00631
symbol: infB
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: SAMN02745206_00633
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: SAMN02745206_00635
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine55 synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: SAMN02745206_00636
symbol: rpsO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: SAMN02745206_00637
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: SAMN02745206_00641
symbol: secF
gene_biotype: protein_coding
description:
  Protein translocase subunit secF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: SAMN02745206_00642
symbol: secD
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: SAMN02745206_00643
symbol: yajC
gene_biotype: protein_coding
description:
  Protein translocase subunit yajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: SAMN02745206_00644
symbol: tgt
gene_biotype: protein_coding
description:
  tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...]


ensembl_gene_id: SAMN02745206_00645
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine--tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: SAMN02745206_00647
symbol: SHE67631.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: SAMN02745206_00657
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: SAMN02745206_00680
symbol: SHE69113.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: SAMN02745206_00698
symbol: vapC
gene_biotype: protein_coding
description:
  Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.


ensembl_gene_id: SAMN02745206_00729
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: SAMN02745206_00731
symbol: SHE71510.1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN02745206_00733
symbol: SHE71602.1
gene_biotype: protein_coding
description:
  Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-); Belongs to the ABC transporter superfamily.


ensembl_gene_id: SAMN02745206_00745
symbol: fusA
gene_biotype: protein_coding
description:
  Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...]


ensembl_gene_id: SAMN02745206_00748
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN02745206_00749
symbol: rpsD
gene_biotype: protein_coding
description:
  SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: SAMN02745206_00750
symbol: rpsK
gene_biotype: protein_coding
description:
  SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: SAMN02745206_00751
symbol: rpsM
gene_biotype: protein_coding
description:
  SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: SAMN02745206_00752
symbol: infA
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 1 (bIF-1); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: SAMN02745206_00753
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: SAMN02745206_00754
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: SAMN02745206_00755
symbol: secY
gene_biotype: protein_coding
description:
  Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: SAMN02745206_00756
symbol: rplO
gene_biotype: protein_coding
description:
  LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: SAMN02745206_00758
symbol: rpsE
gene_biotype: protein_coding
description:
  SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: SAMN02745206_00759
symbol: rplR
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: SAMN02745206_00760
symbol: rplF
gene_biotype: protein_coding
description:
  LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: SAMN02745206_00761
symbol: rpsH
gene_biotype: protein_coding
description:
  SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: SAMN02745206_00762
symbol: rplE
gene_biotype: protein_coding
description:
  LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: SAMN02745206_00763
symbol: rplX
gene_biotype: protein_coding
description:
  LSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: SAMN02745206_00764
symbol: rplN
gene_biotype: protein_coding
description:
  LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: SAMN02745206_00765
symbol: rpsQ
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: SAMN02745206_00767
symbol: rplP
gene_biotype: protein_coding
description:
  LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: SAMN02745206_00768
symbol: rpsC
gene_biotype: protein_coding
description:
  SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: SAMN02745206_00769
symbol: rplV
gene_biotype: protein_coding
description:
  LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: SAMN02745206_00770
symbol: rpsS
gene_biotype: protein_coding
description:
  SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: SAMN02745206_00771
symbol: rplB
gene_biotype: protein_coding
description:
  LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: SAMN02745206_00772
symbol: rplW
gene_biotype: protein_coding
description:
  LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: SAMN02745206_00774
symbol: rplC
gene_biotype: protein_coding
description:
  LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: SAMN02745206_00775
symbol: rpsJ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: SAMN02745206_00776
symbol: tuf
gene_biotype: protein_coding
description:
  Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: SAMN02745206_00781
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: SAMN02745206_00782
symbol: lipB
gene_biotype: protein_coding
description:
  Lipoyl(octanoyl) transferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: SAMN02745206_00784
symbol: gcvPA
gene_biotype: protein_coding
description:
  Glycine dehydrogenase (decarboxylating) alpha subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: SAMN02745206_00785
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: SAMN02745206_00801
symbol: mqnE
gene_biotype: protein_coding
description:
  Aminodeoxyfutalosine synthase; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate.


ensembl_gene_id: SAMN02745206_00802
symbol: mqnC
gene_biotype: protein_coding
description:
  De-hypoxanthine futalosine cyclase; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: SAMN02745206_00804
symbol: mqnA
gene_biotype: protein_coding
description:
  Chorismate dehydratase; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: SAMN02745206_00806
symbol: ubiX
gene_biotype: protein_coding
description:
  4-hydroxy-3-polyprenylbenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: SAMN02745206_00814
symbol: SHE77879.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN02745206_00815
symbol: SHE77923.1
gene_biotype: protein_coding
description:
  Molybdopterin molybdotransferase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN02745206_00816
symbol: mobA
gene_biotype: protein_coding
description:
  Molybdenum cofactor guanylyltransferase; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.


ensembl_gene_id: SAMN02745206_00819
symbol: lgt
gene_biotype: protein_coding
description:
  Phosphatidylglycerol:prolipoprotein diacylglycerol transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: SAMN02745206_00825
symbol: SHE78395.1
gene_biotype: protein_coding
description:
  Cell division transport system permease protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: SAMN02745206_00842
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: SAMN02745206_00843
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: SAMN02745206_00844
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: SAMN02745206_00850
symbol: SHE79590.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma-32 factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02745206_00851
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol phosphate aminotransferase apoenzyme; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: SAMN02745206_00853
symbol: SHE79733.1
gene_biotype: protein_coding
description:
  SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.


ensembl_gene_id: SAMN02745206_00857
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: SAMN02745206_00863
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: SAMN02745206_00866
symbol: prfB
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 2 (bRF-2); Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: SAMN02745206_00867
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: SAMN02745206_00870
symbol: SHE80647.1
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine.


ensembl_gene_id: SAMN02745206_00873
symbol: nadK
gene_biotype: protein_coding
description:
  NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: SAMN02745206_00875
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: SAMN02745206_00878
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: SAMN02745206_00884
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: SAMN02745206_00885
symbol: SHE81416.1
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen-3 oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: SAMN02745206_00941
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: SAMN02745206_00942
symbol: prmC
gene_biotype: protein_coding
description:
  Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: SAMN02745206_00943
symbol: prfA
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 1 (bRF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: SAMN02745206_00946
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: SAMN02745206_00947
symbol: bamD
gene_biotype: protein_coding
description:
  Beta-barrel assembly machine subunit BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: SAMN02745206_00950
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA/Sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: SAMN02745206_00951
symbol: mtnA
gene_biotype: protein_coding
description:
  Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: SAMN02745206_00952
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: SAMN02745206_00953
symbol: sucC
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase (ADP-forming) beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: SAMN02745206_00954
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: SAMN02745206_00956
symbol: SHE87400.1
gene_biotype: protein_coding
description:
  Molybdopterin molybdochelatase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN02745206_00964
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: SAMN02745206_00965
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-phosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: SAMN02745206_00975
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: SAMN02745206_00983
symbol: nadE-2
gene_biotype: protein_coding
description:
  NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: SAMN02745206_00985
symbol: glnD
gene_biotype: protein_coding
description:
  UTP--GlnB (protein PII) uridylyltransferase, GlnD; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.


ensembl_gene_id: SAMN02745206_00987
symbol: SHE88825.1
gene_biotype: protein_coding
description:
  Glutamate-ammonia-ligase adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transd [...]


ensembl_gene_id: SAMN02745206_00995
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: SAMN02745206_01002
symbol: recD2
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V alpha subunit; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.


ensembl_gene_id: SAMN02745206_01008
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: SAMN02745206_01011
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: SAMN02745206_01012
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: SAMN02745206_01015
symbol: SHE89859.1
gene_biotype: protein_coding
description:
  Uncharacterized conserved protein, conains N-terminal glutamine amidotransferase (GATase1)-like domain.


ensembl_gene_id: SAMN02745206_01021
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: SAMN02745206_01022
symbol: SHE90145.1
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: SAMN02745206_01037
symbol: argJ
gene_biotype: protein_coding
description:
  Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: SAMN02745206_01038
symbol: secA
gene_biotype: protein_coding
description:
  Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: SAMN02745206_01051
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.


ensembl_gene_id: SAMN02745206_01053
symbol: SHE94170.1
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: SAMN02745206_01058
symbol: SHE94409.1
gene_biotype: protein_coding
description:
  Adenosylcobinamide kinase; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate.


ensembl_gene_id: SAMN02745206_01059
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: SAMN02745206_01060
symbol: birA
gene_biotype: protein_coding
description:
  Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: SAMN02745206_01061
symbol: dksA
gene_biotype: protein_coding
description:
  Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.


ensembl_gene_id: SAMN02745206_01062
symbol: moaC
gene_biotype: protein_coding
description:
  Cyclic pyranopterin monophosphate synthase subunit MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: SAMN02745206_01065
symbol: phnC
gene_biotype: protein_coding
description:
  Phosphonate transport system ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.


ensembl_gene_id: SAMN02745206_01072
symbol: SHE95057.1
gene_biotype: protein_coding
description:
  Carbon-phosphorous lyase; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.


ensembl_gene_id: SAMN02745206_01117
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]


ensembl_gene_id: SAMN02745206_01146
symbol: SHE98291.1
gene_biotype: protein_coding
description:
  Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02745206_01149
symbol: SHE98435.1
gene_biotype: protein_coding
description:
  Formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02745206_01152
symbol: SHE98595.1
gene_biotype: protein_coding
description:
  Formylmethanofuran dehydrogenase subunit E; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN02745206_01155
symbol: SHE98751.1
gene_biotype: protein_coding
description:
  Monomeric thiosulfate reductase apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02745206_01156
symbol: SHE98805.1
gene_biotype: protein_coding
description:
  Tungstate/molybdate transport system ATP-binding protein; Belongs to the ABC transporter superfamily.


ensembl_gene_id: SAMN02745206_01166
symbol: SHE99253.1
gene_biotype: protein_coding
description:
  Glutamine transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: SAMN02745206_01170
symbol: vapC-2
gene_biotype: protein_coding
description:
  Toxin-antitoxin system PIN domain toxin; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.


ensembl_gene_id: SAMN02745206_01175
symbol: macB
gene_biotype: protein_coding
description:
  Putative ABC transport system ATP-binding protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.


ensembl_gene_id: SAMN02745206_01194
symbol: SHF02089.1
gene_biotype: protein_coding
description:
  Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family; Belongs to the LDH2/MDH2 oxidoreductase family.


ensembl_gene_id: SAMN02745206_01221
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: SAMN02745206_01222
symbol: proA
gene_biotype: protein_coding
description:
  Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: SAMN02745206_01223
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: SAMN02745206_01224
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: SAMN02745206_01226
symbol: SHF03636.1
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SAMN02745206_01230
symbol: rplY
gene_biotype: protein_coding
description:
  LSU ribosomal protein L25P; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: SAMN02745206_01231
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: SAMN02745206_01232
symbol: hppA
gene_biotype: protein_coding
description:
  K(+)-stimulated pyrophosphate-energized sodium pump; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily.


ensembl_gene_id: SAMN02745206_01235
symbol: SHF04068.1
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: SAMN02745206_01270
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: SAMN02745206_01274
symbol: SHF05732.1
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: SAMN02745206_01285
symbol: obg
gene_biotype: protein_coding
description:
  GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: SAMN02745206_01287
symbol: rplU
gene_biotype: protein_coding
description:
  LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: SAMN02745206_01289
symbol: SHF06297.1
gene_biotype: protein_coding
description:
  Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN02745206_01298
symbol: murJ
gene_biotype: protein_coding
description:
  Putative peptidoglycan lipid II flippase; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: SAMN02745206_01307
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase trmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: SAMN02745206_01309
symbol: yidC
gene_biotype: protein_coding
description:
  Protein translocase subunit yidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: SAMN02745206_01310
symbol: SHF09329.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: SAMN02745206_01311
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: SAMN02745206_01313
symbol: SHF09439.1
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the BPG-independent phosphoglycerate mutase family.


ensembl_gene_id: SAMN02745206_01318
symbol: SHF09615.1
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphatase A; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).


ensembl_gene_id: SAMN02745206_01321
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol 3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN02745206_01322
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN02745206_01323
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN02745206_01324
symbol: SHF09832.1
gene_biotype: protein_coding
description:
  DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]


ensembl_gene_id: SAMN02745206_01326
symbol: folD
gene_biotype: protein_coding
description:
  Methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: SAMN02745206_01338
symbol: SHF10370.1
gene_biotype: protein_coding
description:
  5,10-methylenetetrahydrofolate reductase (ferredoxin); Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: SAMN02745206_01342
symbol: purE
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: SAMN02745206_01345
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: SAMN02745206_01346
symbol: mraY
gene_biotype: protein_coding
description:
  Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: SAMN02745206_01352
symbol: groS
gene_biotype: protein_coding
description:
  Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: SAMN02745206_01353
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: SAMN02745206_01354
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: SAMN02745206_01356
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: SAMN02745206_01362
symbol: queF
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.


ensembl_gene_id: SAMN02745206_01368
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN02745206_01371
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III, tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN02745206_01372
symbol: SHF11732.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: SAMN02745206_01373
symbol: recR
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: SAMN02745206_01398
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: SAMN02745206_01399
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.


ensembl_gene_id: SAMN02745206_01400
symbol: SHF12968.1
gene_biotype: protein_coding
description:
  L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.


ensembl_gene_id: SAMN02745206_01425
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: SAMN02745206_01435
symbol: hisH
gene_biotype: protein_coding
description:
  Glutamine amidotransferase / cyclase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF; Belongs to the HisA/HisF family.


ensembl_gene_id: SAMN02745206_01449
symbol: SHF16798.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein, PhoT family; Belongs to the ABC transporter superfamily.


ensembl_gene_id: SAMN02745206_01472
symbol: SHF17765.1
gene_biotype: protein_coding
description:
  Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: SAMN02745206_01476
symbol: SHF17925.1
gene_biotype: protein_coding
description:
  Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.


ensembl_gene_id: SAMN02745206_01495
symbol: SHF18623.1
gene_biotype: protein_coding
description:
  TRAP-type mannitol/chloroaromatic compound transport system, substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.


ensembl_gene_id: SAMN02745206_01505
symbol: panB
gene_biotype: protein_coding
description:
  Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: SAMN02745206_01525
symbol: SHF19818.1
gene_biotype: protein_coding
description:
  CDP-L-myo-inositol myo-inositolphosphotransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN02745206_01534
symbol: cbiA
gene_biotype: protein_coding
description:
  Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: SAMN02745206_01535
symbol: cobQ
gene_biotype: protein_coding
description:
  Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: SAMN02745206_01536
symbol: cobD
gene_biotype: protein_coding
description:
  Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: SAMN02745206_01540
symbol: SHF21639.1
gene_biotype: protein_coding
description:
  methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: SAMN02745206_01553
symbol: clpB
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: SAMN02745206_01558
symbol: SHF22352.1
gene_biotype: protein_coding
description:
  2-oxoglutarate dehydrogenase E2 component; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: SAMN02745206_01563
symbol: lexA
gene_biotype: protein_coding
description:
  Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: SAMN02745206_01575
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.


ensembl_gene_id: SAMN02745206_01577
symbol: SHF23126.1
gene_biotype: protein_coding
description:
  Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: SAMN02745206_01580
symbol: rpsR
gene_biotype: protein_coding
description:
  SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: SAMN02745206_01582
symbol: SHF23341.1
gene_biotype: protein_coding
description:
  Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: SAMN02745206_01590
symbol: SHF23670.1
gene_biotype: protein_coding
description:
  Phosphate transport system permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: SAMN02745206_01594
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate transport system ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: SAMN02745206_01598
symbol: SHF23957.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745206_01604
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: SAMN02745206_01612
symbol: SHF24492.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02745206_01613
symbol: hpf
gene_biotype: protein_coding
description:
  SSU ribosomal protein S30P/sigma 54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: SAMN02745206_01619
symbol: SHF24746.1
gene_biotype: protein_coding
description:
  Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN02745206_01620
symbol: SHF24779.1
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN02745206_01622
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: SAMN02745206_01623
symbol: SHF24891.1
gene_biotype: protein_coding
description:
  Protein translocase subunit secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: SAMN02745206_01626
symbol: SHF24976.1
gene_biotype: protein_coding
description:
  Cellulose synthase subunit; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.


ensembl_gene_id: SAMN02745206_01631
symbol: SHF25161.1
gene_biotype: protein_coding
description:
  AraC family transcriptional regulator, regulatory protein of adaptative response / methylated-DNA-[protein]-cysteine methyltransferase.


ensembl_gene_id: SAMN02745206_01638
symbol: SHF25429.1
gene_biotype: protein_coding
description:
  Putrescine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN02745206_01647
symbol: SHF27129.1
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: SAMN02745206_01653
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: SAMN02745206_01655
symbol: minC
gene_biotype: protein_coding
description:
  Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: SAMN02745206_01674
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: SAMN02745206_01681
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.


ensembl_gene_id: SAMN02745206_01686
symbol: recC
gene_biotype: protein_coding
description:
  DNA helicase/exodeoxyribonuclease V, gamma subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recomb [...]


ensembl_gene_id: SAMN02745206_01688
symbol: recB
gene_biotype: protein_coding
description:
  DNA helicase/exodeoxyribonuclease V, beta subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombi [...]


ensembl_gene_id: SAMN02745206_01696
symbol: recD
gene_biotype: protein_coding
description:
  DNA helicase/exodeoxyribonuclease V, alpha subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recomb [...]


ensembl_gene_id: SAMN02745206_01706
symbol: SHF29449.1
gene_biotype: protein_coding
description:
  NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN02745206_01723
symbol: SHF31199.1
gene_biotype: protein_coding
description:
  MFS transporter, DHA2 family, multidrug resistance protein; Belongs to the major facilitator superfamily.


ensembl_gene_id: SAMN02745206_01737
symbol: ugpE
gene_biotype: protein_coding
description:
  Sn-glycerol 3-phosphate transport system permease protein; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.


ensembl_gene_id: SAMN02745206_01748
symbol: SHF32209.1
gene_biotype: protein_coding
description:
  Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02745206_01754
symbol: SHF32460.1
gene_biotype: protein_coding
description:
  Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.


ensembl_gene_id: SAMN02745206_01760
symbol: SHF32659.1
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: SAMN02745206_01761
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: SAMN02745206_01763
symbol: SHF32780.1
gene_biotype: protein_coding
description:
  tRNA nucleotidyltransferase (CCA-adding enzyme); Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: SAMN02745206_01764
symbol: xerD
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerD subunit; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: SAMN02745206_01801
symbol: cas1
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Cas1 family; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: SAMN02745206_01802
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Cas2 family; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: SAMN02745206_01812
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.


ensembl_gene_id: SAMN02745206_01814
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: SAMN02745206_01815
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: SAMN02745206_01822
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: SAMN02745206_01825
symbol: fdhD-2
gene_biotype: protein_coding
description:
  FdhD protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.


ensembl_gene_id: SAMN02745206_01861
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: SAMN02745206_01862
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: SAMN02745206_01864
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: SAMN02745206_01898
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: SAMN02745206_01899
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: SAMN02745206_01903
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: SAMN02745206_01904
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: SAMN02745206_01905
symbol: ruvC
gene_biotype: protein_coding
description:
  Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: SAMN02745206_01907
symbol: rlmE
gene_biotype: protein_coding
description:
  23S rRNA Um-2552 2'-O-methyltransferase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.


ensembl_gene_id: SAMN02745206_01924
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: SAMN02745206_01925
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN02745206_01927
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase B/B' CF(0); Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: SAMN02745206_01934
symbol: trmL
gene_biotype: protein_coding
description:
  tRNA (cytidine/uridine-2'-O-)-methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.


ensembl_gene_id: SAMN02745206_01936
symbol: SHF41586.1
gene_biotype: protein_coding
description:
  rfaE bifunctional protein, domain II; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose.


ensembl_gene_id: SAMN02745206_01988
symbol: SHF44787.1
gene_biotype: protein_coding
description:
  [methyl-Co(III) methanol-specific corrinoid protein]:coenzyme M methyltransferase; Belongs to the uroporphyrinogen decarboxylase family.


ensembl_gene_id: SAMN02745206_01995
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: SAMN02745206_01997
symbol: lptD
gene_biotype: protein_coding
description:
  LPS-assembly protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.


ensembl_gene_id: SAMN02745206_01998
symbol: SHF45157.1
gene_biotype: protein_coding
description:
  Dihydrofolate synthase / folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: SAMN02745206_02005
symbol: SHF45382.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-); Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: SAMN02745206_02009
symbol: SHF45522.1
gene_biotype: protein_coding
description:
  Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: SAMN02745206_02055
symbol: nfi
gene_biotype: protein_coding
description:
  Endonuclease V; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA.


ensembl_gene_id: SAMN02745206_02056
symbol: SHF47138.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: SAMN02745206_02058
symbol: SHF47213.1
gene_biotype: protein_coding
description:
  Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: SAMN02745206_02059
symbol: SHF47252.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: SAMN02745206_02060
symbol: SHF47295.1
gene_biotype: protein_coding
description:
  23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN02745206_02076
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: SAMN02745206_02088
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: SAMN02745206_02094
symbol: SHF49517.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain.


ensembl_gene_id: SAMN02745206_02096
symbol: SHF49583.1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: SAMN02745206_02098
symbol: nuoH-2
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: SAMN02745206_02100
symbol: SHF49710.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN02745206_02104
symbol: nuoN-2
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: SAMN02745206_02109
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: SAMN02745206_02110
symbol: SHF50059.1
gene_biotype: protein_coding
description:
  Type 4 prepilin peptidase 1 Aspartic peptidase. MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: SAMN02745206_02111
symbol: SHF50093.1
gene_biotype: protein_coding
description:
  16S rRNA (uracil1498-N3)-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: SAMN02745206_02117
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: SAMN02745206_02122
symbol: SHF50404.1
gene_biotype: protein_coding
description:
  Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: SAMN02745206_02129
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: SAMN02745206_02133
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase); Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: SAMN02745206_02134
symbol: prmA
gene_biotype: protein_coding
description:
  [LSU ribosomal protein L11P]-lysine N-methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: SAMN02745206_02140
symbol: trpB-2
gene_biotype: protein_coding
description:
  Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: SAMN02745206_02141
symbol: cysQ
gene_biotype: protein_coding
description:
  3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.


ensembl_gene_id: SAMN02745206_02143
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: SAMN02745206_02145
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: SAMN02745206_02146
symbol: SHF51156.1
gene_biotype: protein_coding
description:
  Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: SAMN02745206_02148
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: SAMN02745206_02152
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: SAMN02745206_02161
symbol: tatA
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: SAMN02745206_02162
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: SAMN02745206_02163
symbol: SHF52801.1
gene_biotype: protein_coding
description:
  XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: SAMN02745206_02166
symbol: SHF52877.1
gene_biotype: protein_coding
description:
  Pyrophosphate-dependent phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family.


ensembl_gene_id: SAMN02745206_02167
symbol: SHF52911.1
gene_biotype: protein_coding
description:
  Putative hydroxymethylpyrimidine transporter CytX; Belongs to the purine-cytosine permease (2.A.39) family.


ensembl_gene_id: SAMN02745206_02176
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: SAMN02745206_02177
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: SAMN02745206_02178
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: SAMN02745206_02179
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent proteinase. Serine peptidase. MEROPS family S16; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: SAMN02745206_02194
symbol: SHF53733.1
gene_biotype: protein_coding
description:
  4-aminobutyrate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN02745206_02206
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: SAMN02745206_02207
symbol: clpS
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: SAMN02745206_02209
symbol: aat
gene_biotype: protein_coding
description:
  leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: SAMN02745206_02211
symbol: SHF54349.1
gene_biotype: protein_coding
description:
  cob(I)yrinic acid a,c-diamide adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.


ensembl_gene_id: SAMN02745206_02213
symbol: efp
gene_biotype: protein_coding
description:
  Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: SAMN02745206_02216
symbol: SHF54530.1
gene_biotype: protein_coding
description:
  Lipopolysaccharide biosynthesis regulator YciM, contains six TPR domains and a predicted metal-binding C-terminal domain.


ensembl_gene_id: SAMN02745206_02223
symbol: xerC
gene_biotype: protein_coding
description:
  Integrase/recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: SAMN02745206_02224
symbol: hslV
gene_biotype: protein_coding
description:
  ATP dependent peptidase CodWX, CodW component. Threonine peptidase. MEROPS family T01B; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: SAMN02745206_02225
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent HslUV protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: SAMN02745206_02226
symbol: argB
gene_biotype: protein_coding
description:
  N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: SAMN02745206_02227
symbol: argD
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase apoenzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: SAMN02745206_02228
symbol: SHF54974.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: SAMN02745206_02232
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: SAMN02745206_02233
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: SAMN02745206_02234
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: SAMN02745206_02235
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: SAMN02745206_02236
symbol: dapL
gene_biotype: protein_coding
description:
  LL-diaminopimelate aminotransferase apoenzyme; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate.


ensembl_gene_id: SAMN02745206_02239
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: SAMN02745206_02245
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: SAMN02745206_02247
symbol: SHF56994.1
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: SAMN02745206_02249
symbol: rlmH
gene_biotype: protein_coding
description:
  23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: SAMN02745206_02251
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: SAMN02745206_02253
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: SAMN02745206_02254
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: SAMN02745206_02259
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: SAMN02745206_02276
symbol: SHF58081.1
gene_biotype: protein_coding
description:
  Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: SAMN02745206_02277
symbol: SHF58113.1
gene_biotype: protein_coding
description:
  Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: SAMN02745206_02281
symbol: fliW
gene_biotype: protein_coding
description:
  Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.


ensembl_gene_id: SAMN02745206_02282
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: SAMN02745206_02292
symbol: SHF58644.1
gene_biotype: protein_coding
description:
  Thiosulfate reductase / polysulfide reductase chain A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02745206_02308
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: SAMN02745206_02333
symbol: rimO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: SAMN02745206_02337
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: SAMN02745206_02339
symbol: tatA-2
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: SAMN02745206_02340
symbol: SHF61623.1
gene_biotype: protein_coding
description:
  Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: SAMN02745206_02341
symbol: SHF61659.1
gene_biotype: protein_coding
description:
  1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: SAMN02745206_02342
symbol: rnj
gene_biotype: protein_coding
description:
  Ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: SAMN02745206_02344
symbol: SHF61777.1
gene_biotype: protein_coding
description:
  Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: SAMN02745206_02345
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: SAMN02745206_02346
symbol: pdxA
gene_biotype: protein_coding
description:
  4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).


ensembl_gene_id: SAMN02745206_02348
symbol: rex
gene_biotype: protein_coding
description:
  Redox-sensing transcriptional repressor; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: SAMN02745206_02363
symbol: SHF62512.1
gene_biotype: protein_coding
description:
  Monovalent cation:H+ antiporter-2, CPA2 family; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: SAMN02745206_02374
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium transporter; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: SAMN02745206_02391
symbol: cheB
gene_biotype: protein_coding
description:
  Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: SAMN02745206_02394
symbol: cheD
gene_biotype: protein_coding
description:
  CheD, stimulates methylation of MCP proteins; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: SAMN02745206_02395
symbol: SHF64671.1
gene_biotype: protein_coding
description:
  Chemotaxis protein methyltransferase CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.


ensembl_gene_id: SAMN02745206_02407
symbol: SHF65094.1
gene_biotype: protein_coding
description:
  Thiol:disulfide interchange protein DsbC; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.


ensembl_gene_id: SAMN02745206_02417
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II Aspartic peptidase. MEROPS family A08; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: SAMN02745206_02418
symbol: ileS
gene_biotype: protein_coding
description:
  Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: SAMN02745206_02436
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: SAMN02745206_02439
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).


ensembl_gene_id: SAMN02745206_02443
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate:acyl-[acyl carrier protein] acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: SAMN02745206_02461
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: SAMN02745206_02462
symbol: SHF68122.1
gene_biotype: protein_coding
description:
  tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: SAMN02745206_02473
symbol: mqnB
gene_biotype: protein_coding
description:
  Futalosine hydrolase; Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: SAMN02745206_02474
symbol: mqnD
gene_biotype: protein_coding
description:
  1,4-dihydroxy-6-naphthoate synthase; Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2); Belongs to the MqnA/MqnD family. MqnD subfamily.


ensembl_gene_id: SAMN02745206_02482
symbol: vapC-3
gene_biotype: protein_coding
description:
  Predicted nucleic acid-binding protein, contains PIN domain; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.


ensembl_gene_id: SAMN02745206_02487
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: SAMN02745206_02488
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: SAMN02745206_02490
symbol: SHF69097.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase subunit B; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.


ensembl_gene_id: SAMN02745206_02515
symbol: rhlB
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase RhlB; DEAD-box RNA helicase involved in RNA degradation. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.


ensembl_gene_id: SAMN02745206_02517
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: SAMN02745206_02549
symbol: SHF72476.1
gene_biotype: protein_coding
description:
  Beta-aspartyl-dipeptidase (metallo-type); Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation. Belongs to the peptidase M38 family.


ensembl_gene_id: SAMN02745206_02586
symbol: SHF75000.1
gene_biotype: protein_coding
description:
  Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: SAMN02745206_02593
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: SAMN02745206_02600
symbol: cbiD
gene_biotype: protein_coding
description:
  cobalt-precorrin-5B (C1)-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.


ensembl_gene_id: SAMN02745206_02619
symbol: gatC
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: SAMN02745206_02620
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: SAMN02745206_02622
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: SAMN02745206_02628
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor (superfamily II helicase); Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN02745206_02629
symbol: selA
gene_biotype: protein_coding
description:
  L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.


ensembl_gene_id: SAMN02745206_02631
symbol: SHF77842.1
gene_biotype: protein_coding
description:
  Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745206_02656
symbol: SHF78779.1
gene_biotype: protein_coding
description:
  L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family.  In the N-terminal section; belongs to the proline dehydrogenase family.


ensembl_gene_id: SAMN02745206_02675
symbol: SHF79520.1
gene_biotype: protein_coding
description:
  Molydopterin dinucleotide binding domain-containing protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02745206_02679
symbol: rnfD
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: SAMN02745206_02680
symbol: rnfG
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.


ensembl_gene_id: SAMN02745206_02681
symbol: rnfE
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfE; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: SAMN02745206_02682
symbol: rnfA-2
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: SAMN02745206_02683
symbol: rnfB
gene_biotype: protein_coding
description:
  Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.


ensembl_gene_id: SAMN02745206_02691
symbol: grpE
gene_biotype: protein_coding
description:
  Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...]


ensembl_gene_id: SAMN02745206_02692
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: SAMN02745206_02698
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: SAMN02745206_02703
symbol: SHF81438.1
gene_biotype: protein_coding
description:
  Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.


ensembl_gene_id: SAMN02745206_02705
symbol: hypA
gene_biotype: protein_coding
description:
  Hydrogenase nickel incorporation protein HypA/HybF; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.


ensembl_gene_id: SAMN02745206_02707
symbol: SHF81585.1
gene_biotype: protein_coding
description:
  Hydrogenase maturation protein, carbamoyltransferase HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide.


ensembl_gene_id: SAMN02745206_02718
symbol: SHF81973.1
gene_biotype: protein_coding
description:
  2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.


ensembl_gene_id: SAMN02745206_02720
symbol: ubiE
gene_biotype: protein_coding
description:
  Demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: SAMN02745206_02722
symbol: SHF82112.1
gene_biotype: protein_coding
description:
  23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: SAMN02745206_02723
symbol: SHF82144.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits).


ensembl_gene_id: SAMN02745206_02739
symbol: SHF82660.1
gene_biotype: protein_coding
description:
  CRISPR-associated exonuclease, Cas4 family; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.


ensembl_gene_id: SAMN02745206_02757
symbol: SHF84149.1
gene_biotype: protein_coding
description:
  Putative ABC transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745206_02762
symbol: SHF84331.1
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: SAMN02745206_02767
symbol: SHF84497.1
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-glucosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: SAMN02745206_02786
symbol: SHF85223.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: SAMN02745206_02850
symbol: pcm
gene_biotype: protein_coding
description:
  protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.


ensembl_gene_id: SAMN02745206_02864
symbol: SHF89746.1
gene_biotype: protein_coding
description:
  6-phosphofructokinase 1; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: SAMN02745206_02875
symbol: SHF90112.1
gene_biotype: protein_coding
description:
  Anaerobic cobaltochelatase; Catalyzes the insertion of Co(2+) into sirohydrochlorin. Belongs to the CbiK family.


ensembl_gene_id: SAMN02745206_02884
symbol: pyrR
gene_biotype: protein_coding
description:
  Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.


ensembl_gene_id: SAMN02745206_02899
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.


ensembl_gene_id: SAMN02745206_02901
symbol: rnc
gene_biotype: protein_coding
description:
  RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: SAMN02745206_02907
symbol: gmd
gene_biotype: protein_coding
description:
  GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.


ensembl_gene_id: SAMN02745206_02919
symbol: dacA
gene_biotype: protein_coding
description:
  TIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: SAMN02745206_02987
symbol: SHF95508.1
gene_biotype: protein_coding
description:
  Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN02745206_02993
symbol: SHF95689.1
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: SAMN02745206_03000
symbol: fur-3
gene_biotype: protein_coding
description:
  Fur family transcriptional regulator, peroxide stress response regulator; Belongs to the Fur family.


ensembl_gene_id: SAMN02745206_03001
symbol: katG
gene_biotype: protein_coding
description:
  Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.


ensembl_gene_id: SAMN02745206_03015
symbol: SHF97088.1
gene_biotype: protein_coding
description:
  GGDEF domain-containing protein, diguanylate cyclase (c-di-GMP synthetase) or its enzymatically inactive variants.


ensembl_gene_id: SAMN02745206_03016
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: SAMN02745206_03017
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: SAMN02745206_03022
symbol: speH
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.


ensembl_gene_id: SAMN02745206_03024
symbol: SHF97400.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.


ensembl_gene_id: SAMN02745206_03036
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: SAMN02745206_03038
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: SAMN02745206_03040
symbol: leuC-2
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: SAMN02745206_03041
symbol: SHF98044.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN02745206_03042
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: SAMN02745206_03043
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: SAMN02745206_03053
symbol: SHF98970.1
gene_biotype: protein_coding
description:
  Barrel-sandwich domain of CusB or HlyD membrane-fusion; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN02745206_03054
symbol: SHF99005.1
gene_biotype: protein_coding
description:
  Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN02745206_03061
symbol: SHF99280.1
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: SAMN02745206_03139
symbol: SHG03128.1
gene_biotype: protein_coding
description:
  Sugar transferase, PEP-CTERM system associated/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.


ensembl_gene_id: SAMN02745206_03146
symbol: SHG03430.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: SAMN02745206_03158
symbol: SHG04398.1
gene_biotype: protein_coding
description:
  Tat (twin-arginine translocation) pathway signal sequence; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.


ensembl_gene_id: SAMN02745206_03175
symbol: SHG05060.1
gene_biotype: protein_coding
description:
  Outer membrane protein TolC; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.


ensembl_gene_id: SAMN02745206_03182
symbol: ade
gene_biotype: protein_coding
description:
  Adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.


ensembl_gene_id: SAMN02745206_03185
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: SAMN02745206_03191
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: SAMN02745206_03192
symbol: infC
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: SAMN02745206_03194
symbol: rplT
gene_biotype: protein_coding
description:
  LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: SAMN02745206_03195
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: SAMN02745206_03196
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: SAMN02745206_03198
symbol: mntP
gene_biotype: protein_coding
description:
  Putative Mn2+ efflux pump MntP; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.


ensembl_gene_id: SAMN02745206_03199
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase subunit II; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to [...]


ensembl_gene_id: SAMN02745206_03201
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase-1; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: SAMN02745206_03235
symbol: tpx
gene_biotype: protein_coding
description:
  Thiol peroxidase (atypical 2-Cys peroxiredoxin); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.


ensembl_gene_id: SAMN02745206_03255
symbol: SHG09674.1
gene_biotype: protein_coding
description:
  Membrane fusion protein, Cu(I)/Ag(I) efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN02745206_03258
symbol: SHG09779.1
gene_biotype: protein_coding
description:
  Cu(I)/Ag(I) efflux system membrane protein CusA/SilA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN02745206_03260
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: SAMN02745206_03263
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: SAMN02745206_03279
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: SAMN02745206_03280
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: SAMN02745206_03285
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: SAMN02745206_03286
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: SAMN02745206_03287
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: SAMN02745206_03290
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA (cytosine1402-N4)-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: SAMN02745206_03334
symbol: acsA
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: SAMN02745206_03339
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: SAMN02745206_03341
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: SAMN02745206_03382
symbol: thi4
gene_biotype: protein_coding
description:
  Thiazole-adenylate synthase; Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur.


ensembl_gene_id: SAMN02745206_03388
symbol: mrdB
gene_biotype: protein_coding
description:
  Cell elongation-specific peptidoglycan biosynthesis regulator RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: SAMN02745206_03389
symbol: atpF-3
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: SAMN02745206_03391
symbol: atpH
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN02745206_03392
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: SAMN02745206_03393
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: SAMN02745206_03394
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: SAMN02745206_03395
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: SAMN02745206_03396
symbol: glmS
gene_biotype: protein_coding
description:
  Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: SAMN02745206_03399
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: SAMN02745206_03405
symbol: ahcY
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: SAMN02745206_03406
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: SAMN02745206_03408
symbol: panD
gene_biotype: protein_coding
description:
  L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: SAMN02745206_03409
symbol: panC
gene_biotype: protein_coding
description:
  Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: SAMN02745206_03416
symbol: rsmA
gene_biotype: protein_coding
description:
  Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: SAMN02745206_03417
symbol: tsaD
gene_biotype: protein_coding
description:
  O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: SAMN02745206_03419
symbol: moaA
gene_biotype: protein_coding
description:
  Cyclic pyranopterin monophosphate synthase subunit MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: SAMN02745206_03429
symbol: nifH
gene_biotype: protein_coding
description:
  Mo-nitrogenase iron protein subunit NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.


ensembl_gene_id: SAMN02745206_03433
symbol: SHG19397.1
gene_biotype: protein_coding
description:
  Mo-nitrogenase MoFe protein subunit NifK; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.


ensembl_gene_id: SAMN02745206_03506
symbol: lpxK
gene_biotype: protein_coding
description:
  lipid-A-disaccharide kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: SAMN02745206_03516
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: SAMN02745206_03519
symbol: SHG23648.1
gene_biotype: protein_coding
description:
  DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: SAMN02745206_03521
symbol: priA
gene_biotype: protein_coding
description:
  Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: SAMN02745206_03522
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: SAMN02745206_03523
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: SAMN02745206_03525
symbol: SHG23839.1
gene_biotype: protein_coding
description:
  16S rRNA (cytosine967-C5)-methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: SAMN02745206_03609
symbol: cobT
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: SAMN02745206_03615
symbol: cbiA-2
gene_biotype: protein_coding
description:
  Hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: SAMN02745206_03637
symbol: recB-2
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V, beta subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and re [...]


ensembl_gene_id: SAMN02745206_03649
symbol: SHG30365.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor synthesis domain-containing protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN02745206_03652
symbol: SHG30473.1
gene_biotype: protein_coding
description:
  Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02745206_03660
symbol: lon-2
gene_biotype: protein_coding
description:
  ATP-dependent Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: SAMN02745206_03663
symbol: SHG31189.1
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: SAMN02745206_03664
symbol: recA
gene_biotype: protein_coding
description:
  Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: SAMN02745206_03665
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: SAMN02745206_03667
symbol: SHG31350.1
gene_biotype: protein_coding
description:
  RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02745206_03674
symbol: SHG31903.1
gene_biotype: protein_coding
description:
  Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.


ensembl_gene_id: SAMN02745206_03681
symbol: SHG32414.1
gene_biotype: protein_coding
description:
  T/G mismatch-specific endonuclease; May nick specific sequences that contain T:G mispairs resulting from m5C-deamination.


ensembl_gene_id: SAMN02745206_03694
symbol: SHG33158.1
gene_biotype: protein_coding
description:
  DNA (cytosine-5)-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.


ensembl_gene_id: SAMN02745206_03699
symbol: secE
gene_biotype: protein_coding
description:
  Protein translocase subunit secE/sec61 gamma; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: SAMN02745206_03700
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: SAMN02745206_03701
symbol: rplK
gene_biotype: protein_coding
description:
  LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: SAMN02745206_03702
symbol: rplA
gene_biotype: protein_coding
description:
  LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: SAMN02745206_03703
symbol: rplJ
gene_biotype: protein_coding
description:
  LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: SAMN02745206_03704
symbol: rplL
gene_biotype: protein_coding
description:
  LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: SAMN02745206_03705
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN02745206_03707
symbol: rpsL
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: SAMN02745206_03708
symbol: rpsG
gene_biotype: protein_coding
description:
  SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: SAMN02745206_03715
symbol: SHG34483.1
gene_biotype: protein_coding
description:
  tRNA (adenine-58-N(1)-) methyltransferase; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA.


ensembl_gene_id: SAMN02745206_03728
symbol: SHG35459.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN02745206_03729
symbol: SHG35498.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: SAMN02745206_03731
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: SAMN02745206_03732
symbol: SHG35623.1
gene_biotype: protein_coding
description:
  Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: SAMN02745206_03734
symbol: ribBA
gene_biotype: protein_coding
description:
  GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: SAMN02745206_03735
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: SAMN02745206_03736
symbol: nusB
gene_biotype: protein_coding
description:
  NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


# pathwayInfo

id: CL:1002
description: Chorismate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1002_Chorismate_biosynthetic_process


id: CL:1022
description: Tryptophan biosynthesis, and ADC synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1022_Tryptophan_biosynthesis,_and_ADC_synthase


id: CL:1025
description: Tryptophan biosynthesis, and ADC synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1025_Tryptophan_biosynthesis,_and_ADC_synthase


id: CL:1066
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1066_Mixed,_incl._Nucleoside_monophosphate_biosynthetic_process,_and_Pteridine-containing_compound_metabolic_process

description:
  Mixed, incl. Nucleoside monophosphate biosynthetic process, and Pteridine-containing compound metabolic process


id: CL:1067
description: Mixed, incl. Nucleoside monophosphate biosynthetic process, and One carbon pool by folate
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1067_Mixed,_incl._Nucleoside_monophosphate_biosynthetic_process,_and_One_carbon_pool_by_folate


id: CL:1068
description: Ribonucleoside monophosphate biosynthetic process, and CBS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1068_Ribonucleoside_monophosphate_biosynthetic_process,_and_CBS_domain


id: CL:1069
description: Ribonucleoside monophosphate biosynthetic process, and Tetrahydrofolate interconversion
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1069_Ribonucleoside_monophosphate_biosynthetic_process,_and_Tetrahydrofolate_interconversion


id: CL:1070
description: De novo IMP biosynthetic process, and Tetrahydrofolate interconversion
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1070_De_novo_IMP_biosynthetic_process,_and_Tetrahydrofolate_interconversion


id: CL:1072
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1072_De_novo_IMP_biosynthetic_process


id: CL:1076
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1076_De_novo_IMP_biosynthetic_process


id: CL:1101
description: De novo UMP biosynthetic process, and Permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1101_De_novo_UMP_biosynthetic_process,_and_Permease_family


id: CL:1105
description: De novo UMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1105_De_novo_UMP_biosynthetic_process


id: CL:1124
description: CBS domain, and Glutamine amidotransferase class-I
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1124_CBS_domain,_and_Glutamine_amidotransferase_class-I


id: CL:1129
description: Mixed, incl. GMP biosynthesis, and De novo AMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1129_Mixed,_incl._GMP_biosynthesis,_and_De_novo_AMP_biosynthetic_process


id: CL:1145
description: Mixed, incl. Riboflavin metabolic process, and Alpha/beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1145_Mixed,_incl._Riboflavin_metabolic_process,_and_Alpha/beta_hydrolase_fold


id: CL:1146
description: Mixed, incl. Alpha/beta hydrolase fold, and dTTP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1146_Mixed,_incl._Alpha/beta_hydrolase_fold,_and_dTTP_biosynthetic_process


id: CL:1148
description: dTTP biosynthetic process, and CGCAxxGCC motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1148_dTTP_biosynthetic_process,_and_CGCAxxGCC_motif


id: CL:1162
description: Alpha/beta hydrolase fold, and dTMP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1162_Alpha/beta_hydrolase_fold,_and_dTMP_metabolic_process


id: CL:1173
description: Mixed, incl. Riboflavin metabolic process, and Nitroreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1173_Mixed,_incl._Riboflavin_metabolic_process,_and_Nitroreductase


id: CL:1197
description: Folic acid metabolic process, and GTP cyclohydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1197_Folic_acid_metabolic_process,_and_GTP_cyclohydrolase_activity


id: CL:1210
description: Mixed, incl. Pyridine nucleotide biosynthetic process, and Cupin 2, conserved barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1210_Mixed,_incl._Pyridine_nucleotide_biosynthetic_process,_and_Cupin_2,_conserved_barrel


id: CL:1212
description: Pyridine nucleotide biosynthetic process, and Cupin 2, conserved barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1212_Pyridine_nucleotide_biosynthetic_process,_and_Cupin_2,_conserved_barrel


id: CL:1215
description: Pyridine nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1215_Pyridine_nucleotide_biosynthetic_process


id: CL:1219
description: NAD biosynthetic process, and Sir2 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1219_NAD_biosynthetic_process,_and_Sir2_family


id: CL:1260
description: Phosphorylase superfamily, and Nucleotidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1260_Phosphorylase_superfamily,_and_Nucleotidase_activity


id: CL:127
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:127_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:1279
description: Pantothenate metabolic process, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1279_Pantothenate_metabolic_process,_and_Coenzyme_A_biosynthesis


id: CL:128
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:128_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:129
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:129_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:130
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:130_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:1305
description: Mixed, incl. Regulation of cell shape, and Beta-lactamase/transpeptidase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1305_Mixed,_incl._Regulation_of_cell_shape,_and_Beta-lactamase/transpeptidase-like


id: CL:1306
description: Mixed, incl. Regulation of cell shape, and Cell cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1306_Mixed,_incl._Regulation_of_cell_shape,_and_Cell_cycle


id: CL:1307
description: Mixed, incl. Regulation of cell shape, and Penicillin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1307_Mixed,_incl._Regulation_of_cell_shape,_and_Penicillin_binding


id: CL:1308
description: Regulation of cell shape, and Penicillin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1308_Regulation_of_cell_shape,_and_Penicillin_binding


id: CL:1309
description: Cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1309_Cell_shape,_and_Cell_division_site


id: CL:131
description: Translation, and Purine nucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:131_Translation,_and_Purine_nucleoside_triphosphate_biosynthetic_process


id: CL:1312
description: Cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1312_Cell_shape,_and_Cell_division_site


id: CL:1314
description: MurE/MurF, N-terminal, and HEAT repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1314_MurE/MurF,_N-terminal,_and_HEAT_repeats


id: CL:133
description: Translation, and Purine nucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:133_Translation,_and_Purine_nucleoside_triphosphate_biosynthetic_process


id: CL:134
description: Ribosome, and Purine nucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:134_Ribosome,_and_Purine_nucleoside_triphosphate_biosynthetic_process


id: CL:1350
description: Mixed, incl. Cell cycle protein, and Cell shape determining protein MreB
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1350_Mixed,_incl._Cell_cycle_protein,_and_Cell_shape_determining_protein_MreB


id: CL:136
description: Structural constituent of ribosome, and Purine nucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:136_Structural_constituent_of_ribosome,_and_Purine_nucleoside_triphosphate_biosynthetic_process


id: CL:1367
description: D-alanine-D-alanine ligase activity, and Lysine-2,3-aminomutase, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1367_D-alanine-D-alanine_ligase_activity,_and_Lysine-2,3-aminomutase,_C-terminal_domain


id: CL:138
description: Structural constituent of ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:138_Structural_constituent_of_ribosome,_and_Regulation_of_translation


id: CL:1380
description: Mixed, incl. Peptidoglycan muralytic activity, and SPOR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1380_Mixed,_incl._Peptidoglycan_muralytic_activity,_and_SPOR_domain


id: CL:1383
description: SPOR domain, and Peptidoglycan catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1383_SPOR_domain,_and_Peptidoglycan_catabolic_process


id: CL:1396
description: Mixed, incl. Peptidase M23, and Tail specific protease
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1396_Mixed,_incl._Peptidase_M23,_and_Tail_specific_protease


id: CL:140
description: Structural constituent of ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:140_Structural_constituent_of_ribosome,_and_Regulation_of_translation


id: CL:1405
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1405_Mixed,_incl._Beta-lactamase/transpeptidase-like,_and_Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds

description:
  Mixed, incl. Beta-lactamase/transpeptidase-like, and Hydrolase activity, hydrolyzing O-glycosyl compounds


id: CL:1408
description: Carboxypeptidase, and Hydrolase activity, hydrolyzing O-glycosyl compounds
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1408_Carboxypeptidase,_and_Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds


id: CL:141
description: Structural constituent of ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:141_Structural_constituent_of_ribosome,_and_Regulation_of_translation


id: CL:1427
description: Mixed, incl. Alpha/beta knot methyltransferases, and Methyltransferase small domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1427_Mixed,_incl._Alpha/beta_knot_methyltransferases,_and_Methyltransferase_small_domain


id: CL:1429
description: Methyltransferase small domain, and rRNA methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1429_Methyltransferase_small_domain,_and_rRNA_methyltransferase_activity


id: CL:145
description: Structural constituent of ribosome, and Translational elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:145_Structural_constituent_of_ribosome,_and_Translational_elongation


id: CL:1462
description: Mixed, incl. Pyruvate metabolism, and Butanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1462_Mixed,_incl._Pyruvate_metabolism,_and_Butanoate_metabolism


id: CL:1463
description: Mixed, incl. Butanoate metabolism, and Pyruvate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1463_Mixed,_incl._Butanoate_metabolism,_and_Pyruvate_metabolism


id: CL:1464
description: Mixed, incl. Propanoate metabolism, and Acyl-CoA dehydrogenase, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1464_Mixed,_incl._Propanoate_metabolism,_and_Acyl-CoA_dehydrogenase,_C-terminal_domain


id: CL:1465
description: Mixed, incl. Fatty acid metabolic process, and Acyl-CoA dehydrogenase, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1465_Mixed,_incl._Fatty_acid_metabolic_process,_and_Acyl-CoA_dehydrogenase,_C-terminal_domain


id: CL:1467
description: Mixed, incl. Fatty acid metabolic process, and AMP-binding enzyme C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1467_Mixed,_incl._Fatty_acid_metabolic_process,_and_AMP-binding_enzyme_C-terminal_domain


id: CL:147
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:147_Structural_constituent_of_ribosome


id: CL:1470
description: Fatty acid degradation, and Enoyl-CoA hydratase/isomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1470_Fatty_acid_degradation,_and_Enoyl-CoA_hydratase/isomerase


id: CL:1472
description: Lipid oxidation, and Enoyl-CoA hydratase/isomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1472_Lipid_oxidation,_and_Enoyl-CoA_hydratase/isomerase


id: CL:1474
description: Lipid oxidation, and Enoyl-CoA hydratase/isomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1474_Lipid_oxidation,_and_Enoyl-CoA_hydratase/isomerase


id: CL:1477
description: Lipid oxidation, and Enoyl-CoA hydratase/isomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1477_Lipid_oxidation,_and_Enoyl-CoA_hydratase/isomerase


id: CL:1494
description: Thiolase, and Enoyl-CoA hydratase/isomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1494_Thiolase,_and_Enoyl-CoA_hydratase/isomerase


id: CL:150
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:150_Structural_constituent_of_ribosome


id: CL:153
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:153_Structural_constituent_of_ribosome


id: CL:1541
description: Mixed, incl. Ligase activity, forming carbon-carbon bonds, and Ectoine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1541_Mixed,_incl._Ligase_activity,_forming_carbon-carbon_bonds,_and_Ectoine_metabolic_process


id: CL:1544
description: Mixed, incl. Acetyl-coenzyme A synthetase N-terminus, and Aldehyde dehydrogenase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1544_Mixed,_incl._Acetyl-coenzyme_A_synthetase_N-terminus,_and_Aldehyde_dehydrogenase_family


id: CL:1546
description: Taurine and hypotaurine metabolism, and Acetyl-CoA hydrolase/transferase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1546_Taurine_and_hypotaurine_metabolism,_and_Acetyl-CoA_hydrolase/transferase,_N-terminal


id: CL:155
description: rRNA-binding, and Peptide binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:155_rRNA-binding,_and_Peptide_binding


id: CL:156
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:156_Structural_constituent_of_ribosome


id: CL:1569
description: Ligase activity, forming carbon-carbon bonds, and Conserved carboxylase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1569_Ligase_activity,_forming_carbon-carbon_bonds,_and_Conserved_carboxylase_domain


id: CL:1593
description: Electron transfer flavoprotein domain, and FAD binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1593_Electron_transfer_flavoprotein_domain,_and_FAD_binding


id: CL:1617
description: Citrate cycle (TCA cycle), and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1617_Citrate_cycle_(TCA_cycle),_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:1618
description: Citrate cycle (TCA cycle), and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1618_Citrate_cycle_(TCA_cycle),_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:1619
description: Citrate cycle (TCA cycle), and Pyruvate, water dikinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1619_Citrate_cycle_(TCA_cycle),_and_Pyruvate,_water_dikinase_activity


id: CL:1621
description: acetyl-CoA biosynthetic process from pyruvate, and Pyruvate ferredoxin/flavodoxin oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1621_acetyl-CoA_biosynthetic_process_from_pyruvate,_and_Pyruvate_ferredoxin/flavodoxin_oxidoreductase


id: CL:1624
description: acetyl-CoA biosynthetic process from pyruvate
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1624_acetyl-CoA_biosynthetic_process_from_pyruvate


id: CL:1645
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1645_Thiamin_diphosphate-binding_fold,_and_2-oxoacid:acceptor_oxidoreductase,_gamma_subunit,_pyruvate/2-ketoisovalerate

description:
  Thiamin diphosphate-binding fold, and 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate


id: CL:1665
description: Pyruvate, water dikinase activity, and Conserved carboxylase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1665_Pyruvate,_water_dikinase_activity,_and_Conserved_carboxylase_domain


id: CL:1676
description: Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1676_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:1679
description: Leucine biosynthesis, and Valine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1679_Leucine_biosynthesis,_and_Valine_metabolic_process


id: CL:1696
description: 2-isopropylmalate synthase activity, and Valine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1696_2-isopropylmalate_synthase_activity,_and_Valine_metabolic_process


id: CL:1705
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1705_Tricarboxylic_acid_cycle,_and_Fumarate_reductase/succinate_dehydrogenase_flavoprotein-like,_C-terminal_domain_superfamily

description:
  Tricarboxylic acid cycle, and Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain superfamily


id: CL:1707
description: Tricarboxylic acid cycle, and 3Fe-4S
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1707_Tricarboxylic_acid_cycle,_and_3Fe-4S


id: CL:1738
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1738_Mixed,_incl._Glycine,_serine_and_threonine_metabolism,_and_Alanine,_aspartate_and_glutamate_metabolism

description:
  Mixed, incl. Glycine, serine and threonine metabolism, and Alanine, aspartate and glutamate metabolism


id: CL:1739
description: Mixed, incl. Glycine catabolic process, and Alanine, aspartate and glutamate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1739_Mixed,_incl._Glycine_catabolic_process,_and_Alanine,_aspartate_and_glutamate_metabolism


id: CL:1740
description: Mixed, incl. Glycine catabolic process, and Pyridine nucleotide-disulphide oxidoreductase, class I
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1740_Mixed,_incl._Glycine_catabolic_process,_and_Pyridine_nucleotide-disulphide_oxidoreductase,_class_I


id: CL:1742
description: Mixed, incl. e3 binding domain, and Dehydrogenase, E1 component
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1742_Mixed,_incl._e3_binding_domain,_and_Dehydrogenase,_E1_component


id: CL:1744
description: Mixed, incl. Dehydrogenase E1 component, and e3 binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1744_Mixed,_incl._Dehydrogenase_E1_component,_and_e3_binding_domain


id: CL:1785
description: Alanine, aspartate and glutamate metabolism, and Nucleophile aminohydrolases, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1785_Alanine,_aspartate_and_glutamate_metabolism,_and_Nucleophile_aminohydrolases,_N-terminal


id: CL:1789
description: Mixed, incl. Glutamate biosynthetic process, and Glutamate dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1789_Mixed,_incl._Glutamate_biosynthetic_process,_and_Glutamate_dehydrogenase


id: CL:1791
description: Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster, and Glutamate dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1791_Dihydroprymidine_dehydrogenase_domain_II,_4Fe-4S_cluster,_and_Glutamate_dehydrogenase


id: CL:1819
description: Mixed, incl. Sarcosine oxidase activity, and D-amino acid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1819_Mixed,_incl._Sarcosine_oxidase_activity,_and_D-amino_acid_catabolic_process


id: CL:183
description: Ribosomal subunit, and Peptide binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:183_Ribosomal_subunit,_and_Peptide_binding


id: CL:1835
description: Mixed, incl. Fatty acid biosynthesis, and Acyl-CoA thioester hydrolase YbgC/YbaW family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1835_Mixed,_incl._Fatty_acid_biosynthesis,_and_Acyl-CoA_thioester_hydrolase_YbgC/YbaW_family


id: CL:1837
description: Fatty acid biosynthesis, and Acyl-CoA thioester hydrolase YbgC/YbaW family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1837_Fatty_acid_biosynthesis,_and_Acyl-CoA_thioester_hydrolase_YbgC/YbaW_family


id: CL:1841
description: Fatty acid biosynthesis, and MaoC like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1841_Fatty_acid_biosynthesis,_and_MaoC_like_domain


id: CL:1880
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1880_Mixed,_incl._Pentose_phosphate_pathway,_and_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor

description:
  Mixed, incl. Pentose phosphate pathway, and Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor


id: CL:1881
description: Mixed, incl. Pentose phosphate pathway, and Import across plasma membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1881_Mixed,_incl._Pentose_phosphate_pathway,_and_Import_across_plasma_membrane


id: CL:1882
description: Mixed, incl. Pentose phosphate pathway, and Import across plasma membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1882_Mixed,_incl._Pentose_phosphate_pathway,_and_Import_across_plasma_membrane


id: CL:1883
description: Mixed, incl. Pentose phosphate pathway, and Import across plasma membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1883_Mixed,_incl._Pentose_phosphate_pathway,_and_Import_across_plasma_membrane


id: CL:1884
description: Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1884_Pentose_phosphate_pathway,_and_Glycolysis


id: CL:1886
description: Glycolytic process, and Sugar-phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1886_Glycolytic_process,_and_Sugar-phosphatase_activity


id: CL:1890
description: Glycolytic process, and NADPH regeneration
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1890_Glycolytic_process,_and_NADPH_regeneration


id: CL:1892
description: Glyceraldehyde 3-phosphate dehydrogenase, active site, and Glycolytic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1892_Glyceraldehyde_3-phosphate_dehydrogenase,_active_site,_and_Glycolytic_process


id: CL:1934
description: Import across plasma membrane, and Phosphomethylpyrimidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1934_Import_across_plasma_membrane,_and_Phosphomethylpyrimidine_kinase


id: CL:1948
description: Mixed, incl. Cellular carbohydrate catabolic process, and pfkB family carbohydrate kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1948_Mixed,_incl._Cellular_carbohydrate_catabolic_process,_and_pfkB_family_carbohydrate_kinase


id: CL:1949
description: Mixed, incl. KR domain, and Carbohydrate kinase, FGGY
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1949_Mixed,_incl._KR_domain,_and_Carbohydrate_kinase,_FGGY


id: CL:1960
description: Mixed, incl. pfkB family carbohydrate kinase, and DapA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1960_Mixed,_incl._pfkB_family_carbohydrate_kinase,_and_DapA-like


id: CL:1971
description: Mixed, incl. Glycolate oxidase complex, and Serine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1971_Mixed,_incl._Glycolate_oxidase_complex,_and_Serine_biosynthesis


id: CL:1973
description: Glycolate oxidase complex, and Phosphoglycolate phosphatase-like, domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1973_Glycolate_oxidase_complex,_and_Phosphoglycolate_phosphatase-like,_domain_2


id: CL:1994
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1994_Mixed,_incl._Alcohol_dehydrogenase-like,_N-terminal,_and_Alcohol_dehydrogenase,_iron-type/glycerol_dehydrogenase_GldA

description:
  Mixed, incl. Alcohol dehydrogenase-like, N-terminal, and Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA


id: CL:1996
description: Alcohol dehydrogenase-like, N-terminal, and Iron-type alcohol dehydrogenase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1996_Alcohol_dehydrogenase-like,_N-terminal,_and_Iron-type_alcohol_dehydrogenase-like


id: CL:1998
description: Alcohol dehydrogenase-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:1998_Alcohol_dehydrogenase-like,_N-terminal


id: CL:2031
description: Iron-sulfur cluster binding, and Quinone
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2031_Iron-sulfur_cluster_binding,_and_Quinone


id: CL:2032
description: Cellular respiration, and 4Fe-4S ferredoxin, iron-sulphur binding, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2032_Cellular_respiration,_and_4Fe-4S_ferredoxin,_iron-sulphur_binding,_conserved_site


id: CL:2033
description: Cellular respiration, and Quinone binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2033_Cellular_respiration,_and_Quinone_binding


id: CL:2034
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2034_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor,_and_NADH-ubiquinone_oxidoreductase_51kDa_subunit,_iron-sulphur_binding_domain_superfamily

description:
  Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor, and NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily


id: CL:2036
description: Quinone binding, and Thioredoxin-like [2Fe-2S] ferredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2036_Quinone_binding,_and_Thioredoxin-like_[2Fe-2S]_ferredoxin


id: CL:2037
description: Quinone, and Proton-conducting membrane transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2037_Quinone,_and_Proton-conducting_membrane_transporter


id: CL:2039
description: Quinone, and Proton-conducting membrane transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2039_Quinone,_and_Proton-conducting_membrane_transporter


id: CL:2040
description: Proton-conducting membrane transporter, and NADH-ubiquinone oxidoreductase chain 4L/K
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2040_Proton-conducting_membrane_transporter,_and_NADH-ubiquinone_oxidoreductase_chain_4L/K


id: CL:2084
description: Mixed, incl. Thioredoxin-like [2Fe-2S] ferredoxin, and START-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2084_Mixed,_incl._Thioredoxin-like_[2Fe-2S]_ferredoxin,_and_START-like_domain_superfamily


id: CL:210
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:210_Structural_constituent_of_ribosome


id: CL:2102
description: Molybdopterin oxidoreductase, and Dihydroprymidine dehydrogenase domain II
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2102_Molybdopterin_oxidoreductase,_and_Dihydroprymidine_dehydrogenase_domain_II


id: CL:2103
description: Dihydroprymidine dehydrogenase domain II, and Respiratory chain complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2103_Dihydroprymidine_dehydrogenase_domain_II,_and_Respiratory_chain_complex


id: CL:2105
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2105_Mixed,_incl._Dihydroprymidine_dehydrogenase_domain_II,_and_Molybdopterin_oxidoreductase,_molybdopterin_cofactor_binding_site

description:
  Mixed, incl. Dihydroprymidine dehydrogenase domain II, and Molybdopterin oxidoreductase, molybdopterin cofactor binding site


id: CL:2108
description: Dihydroprymidine dehydrogenase domain II, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2108_Dihydroprymidine_dehydrogenase_domain_II,_and_4Fe-4S_binding_domain


id: CL:212
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:212_Structural_constituent_of_ribosome


id: CL:2134
description: Formate dehydrogenase H, molybdopterin-binding domain, and FdhD/NarQ family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2134_Formate_dehydrogenase_H,_molybdopterin-binding_domain,_and_FdhD/NarQ_family


id: CL:214
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:214_Structural_constituent_of_ribosome


id: CL:2153
description: Mixed, incl. Molybdopterin cofactor binding, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2153_Mixed,_incl._Molybdopterin_cofactor_binding,_and_4Fe-4S_dicluster_domain


id: CL:2155
description: Mixed, incl. Molybdopterin cofactor binding, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2155_Mixed,_incl._Molybdopterin_cofactor_binding,_and_4Fe-4S_dicluster_domain


id: CL:2157
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2157_Mixed,_incl._Acetylene_hydratase_activity,_and_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_quinone_or_similar_compound_as_acceptor

description:
  Mixed, incl. Acetylene hydratase activity, and Oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor


id: CL:2159
description: Mixed, incl. Cytochrome c7-like, and Cytochrome c-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2159_Mixed,_incl._Cytochrome_c7-like,_and_Cytochrome_c-like_domain


id: CL:2172
description: Mixed, incl. NrfD family, and Peptide binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2172_Mixed,_incl._NrfD_family,_and_Peptide_binding


id: CL:2183
description: Formate dehydrogenase complex, and FdhE-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2183_Formate_dehydrogenase_complex,_and_FdhE-like_superfamily


id: CL:2209
description: Methane metabolism, and LUD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2209_Methane_metabolism,_and_LUD_domain


id: CL:2213
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2213_Mixed,_incl._H(2):CoB-CoM_heterodisulfide,ferredoxin_reductase_subunit_A-like,_and_Methyl-viologen-reducing_hydrogenase,_delta_subunit

description:
  Mixed, incl. H(2):CoB-CoM heterodisulfide,ferredoxin reductase subunit A-like, and Methyl-viologen-reducing hydrogenase, delta subunit


id: CL:2215
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2215_H(2):CoB-CoM_heterodisulfide,ferredoxin_reductase_subunit_A-like,_and_Methyl-viologen-reducing_hydrogenase,_delta_subunit

description:
  H(2):CoB-CoM heterodisulfide,ferredoxin reductase subunit A-like, and Methyl-viologen-reducing hydrogenase, delta subunit


id: CL:2217
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2217_H(2):CoB-CoM_heterodisulfide,ferredoxin_reductase_subunit_A-like,_and_Methyl-viologen-reducing_hydrogenase,_delta_subunit

description:
  H(2):CoB-CoM heterodisulfide,ferredoxin reductase subunit A-like, and Methyl-viologen-reducing hydrogenase, delta subunit


id: CL:2220
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2220_H(2):CoB-CoM_heterodisulfide,ferredoxin_reductase_subunit_A-like,_and_Methyl-viologen-reducing_hydrogenase,_delta_subunit

description:
  H(2):CoB-CoM heterodisulfide,ferredoxin reductase subunit A-like, and Methyl-viologen-reducing hydrogenase, delta subunit


id: CL:2222
description: H(2):CoB-CoM heterodisulfide,ferredoxin reductase subunit A-like, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2222_H(2):CoB-CoM_heterodisulfide,ferredoxin_reductase_subunit_A-like,_and_4Fe-4S_dicluster_domain


id: CL:2225
description: H(2):CoB-CoM heterodisulfide,ferredoxin reductase subunit A-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2225_H(2):CoB-CoM_heterodisulfide,ferredoxin_reductase_subunit_A-like


id: CL:2283
description: Mixed, incl. Lactate oxidation, and Flavoprotein pyridine nucleotide cytochrome reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2283_Mixed,_incl._Lactate_oxidation,_and_Flavoprotein_pyridine_nucleotide_cytochrome_reductase


id: CL:2286
description: Lactate oxidation, and HI0933-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2286_Lactate_oxidation,_and_HI0933-like_protein


id: CL:2312
description: Glycine betaine catabolic process, and glycerol-3-phosphate dehydrogenase (quinone) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2312_Glycine_betaine_catabolic_process,_and_glycerol-3-phosphate_dehydrogenase_(quinone)_activity


id: CL:2333
description: Mixed, incl. Sulfur metabolism, and NarG-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2333_Mixed,_incl._Sulfur_metabolism,_and_NarG-like_domain


id: CL:2335
description: Mixed, incl. Nitrite/sulphite reductase 4Fe-4S domain, and NrfD family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2335_Mixed,_incl._Nitrite/sulphite_reductase_4Fe-4S_domain,_and_NrfD_family


id: CL:2338
description: Nitrite/Sulfite reductase ferredoxin-like domain, and SNO glutamine amidotransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2338_Nitrite/Sulfite_reductase_ferredoxin-like_domain,_and_SNO_glutamine_amidotransferase_family


id: CL:2350
description: Mixed, incl. NrfD family, and NarG-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2350_Mixed,_incl._NrfD_family,_and_NarG-like_domain


id: CL:2363
description: Sulfate reduction, and Putative zinc- or iron-chelating domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2363_Sulfate_reduction,_and_Putative_zinc-_or_iron-chelating_domain


id: CL:2384
description: Mixed, incl. Phenylacetate catabolic process, and Indolepyruvate oxidoreductase subunit IorA
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2384_Mixed,_incl._Phenylacetate_catabolic_process,_and_Indolepyruvate_oxidoreductase_subunit_IorA


id: CL:2385
description: Indolepyruvate oxidoreductase subunit IorA, and Pyruvate ferredoxin/flavodoxin oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2385_Indolepyruvate_oxidoreductase_subunit_IorA,_and_Pyruvate_ferredoxin/flavodoxin_oxidoreductase


id: CL:2396
description: Phenylacetate catabolic process, and AMP-dependent ligase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2396_Phenylacetate_catabolic_process,_and_AMP-dependent_ligase,_C-terminal


id: CL:2410
description: Mixed, incl. PUA domain superfamily, and Zinc-binding dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2410_Mixed,_incl._PUA_domain_superfamily,_and_Zinc-binding_dehydrogenase


id: CL:2426
description: Mixed, incl. Sulfur relay system, and Thioredoxin-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2426_Mixed,_incl._Sulfur_relay_system,_and_Thioredoxin-like_superfamily


id: CL:2427
description: Mixed, incl. Sulfur relay system, and Oxidoreductase activity, acting on a sulfur group of donors
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2427_Mixed,_incl._Sulfur_relay_system,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: CL:2429
description: Mixed, incl. Sulfur relay system, and Oxidoreductase activity, acting on a sulfur group of donors
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2429_Mixed,_incl._Sulfur_relay_system,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: CL:2430
description: Mixed, incl. Sulfur relay system, and Oxidoreductase activity, acting on a sulfur group of donors
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2430_Mixed,_incl._Sulfur_relay_system,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: CL:2431
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2431_Mixed,_incl._Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_and_Iron-sulfur_cluster_assembly

description:
  Mixed, incl. Oxidoreductase activity, acting on a sulfur group of donors, and Iron-sulfur cluster assembly


id: CL:2432
description: Oxidoreductase activity, acting on a sulfur group of donors, and Thioredoxin-like fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2432_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_and_Thioredoxin-like_fold


id: CL:2433
description: Oxidoreductase activity, acting on a sulfur group of donors, and Redox-active disulphide protein 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2433_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_and_Redox-active_disulphide_protein_2


id: CL:2434
description: Thioredoxin, and Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2434_Thioredoxin,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: CL:2443
description: Thioredoxin domain, and Cobalamin
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2443_Thioredoxin_domain,_and_Cobalamin


id: CL:2454
description: Thioredoxin-like domain, and Protein-disulfide reductase (NAD(P)) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2454_Thioredoxin-like_domain,_and_Protein-disulfide_reductase_(NAD(P))_activity


id: CL:2469
description: Iron-sulfur cluster assembly, and Transcription regulator Rrf2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2469_Iron-sulfur_cluster_assembly,_and_Transcription_regulator_Rrf2


id: CL:2471
description: Iron-sulfur cluster assembly complex, and Cysteine desulfurase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2471_Iron-sulfur_cluster_assembly_complex,_and_Cysteine_desulfurase


id: CL:2495
description: Mixed, incl. Sulfur relay system, and Metallo-beta-lactamase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2495_Mixed,_incl._Sulfur_relay_system,_and_Metallo-beta-lactamase


id: CL:2496
description: Mixed, incl. DsrE/DsrF-like family, and Rhodanese Homology Domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2496_Mixed,_incl._DsrE/DsrF-like_family,_and_Rhodanese_Homology_Domain


id: CL:2497
description: Methylamine utilisation protein MauE, and Metallo-beta-lactamase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2497_Methylamine_utilisation_protein_MauE,_and_Metallo-beta-lactamase


id: CL:2500
description: Mixed, incl. tRNA pseudouridine synthesis, and Response to arsenic-containing substance
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2500_Mixed,_incl._tRNA_pseudouridine_synthesis,_and_Response_to_arsenic-containing_substance


id: CL:2517
description: DsrE2-like family, and TusA-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2517_DsrE2-like_family,_and_TusA-like_domain


id: CL:2529
description: Mixed, incl. Sulphur transport, and Transsulfuration
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2529_Mixed,_incl._Sulphur_transport,_and_Transsulfuration


id: CL:2545
description: Mixed, incl. HTH ArsR-type DNA-binding domain, and E1-E2 ATPase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2545_Mixed,_incl._HTH_ArsR-type_DNA-binding_domain,_and_E1-E2_ATPase


id: CL:2547
description: HTH ArsR-type DNA-binding domain, and Predicted permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2547_HTH_ArsR-type_DNA-binding_domain,_and_Predicted_permease


id: CL:2559
description: Mixed, incl. E1-E2 ATPase, and Heavy-metal-associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2559_Mixed,_incl._E1-E2_ATPase,_and_Heavy-metal-associated_domain


id: CL:2581
description: Nitrotoluene catabolic process, and AMP-binding enzyme, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2581_Nitrotoluene_catabolic_process,_and_AMP-binding_enzyme,_C-terminal_domain


id: CL:2596
description: Mixed, incl. AhpC/TSA family, and Thioredoxin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2596_Mixed,_incl._AhpC/TSA_family,_and_Thioredoxin-like


id: CL:2598
description: AhpC/TSA family, and Flavodoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2598_AhpC/TSA_family,_and_Flavodoxin


id: CL:2608
description: Mixed, incl. Thioredoxin-like, and Cytochrome c7-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2608_Mixed,_incl._Thioredoxin-like,_and_Cytochrome_c7-like


id: CL:2617
description: Mixed, incl. Polyamine metabolic process, and Manganese ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2617_Mixed,_incl._Polyamine_metabolic_process,_and_Manganese_ion_binding


id: CL:2618
description: Mixed, incl. Arginine and proline metabolism, and Formate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2618_Mixed,_incl._Arginine_and_proline_metabolism,_and_Formate_metabolic_process


id: CL:2619
description: Mixed, incl. Spermidine metabolic process, and Formate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2619_Mixed,_incl._Spermidine_metabolic_process,_and_Formate_metabolic_process


id: CL:262
description: Mixed, incl. EFG, domain V, and glutamyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:262_Mixed,_incl._EFG,_domain_V,_and_glutamyl-tRNA_aminoacylation


id: CL:2621
description: Spermidine metabolic process, and Ureohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2621_Spermidine_metabolic_process,_and_Ureohydrolase


id: CL:2623
description: Spermidine metabolic process, and Agmatinase-related
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2623_Spermidine_metabolic_process,_and_Agmatinase-related


id: CL:2667
description: Mixed, incl. Agmatinase-related, and Nucleotide diphosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2667_Mixed,_incl._Agmatinase-related,_and_Nucleotide_diphosphatase_activity


id: CL:2677
description: Mixed, incl. MmgE/PrpD, and L-alanine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2677_Mixed,_incl._MmgE/PrpD,_and_L-alanine_metabolic_process


id: CL:2686
description: Mixed, incl. Glycerophospholipid metabolism, and Domain of unknown function DUF362
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2686_Mixed,_incl._Glycerophospholipid_metabolism,_and_Domain_of_unknown_function_DUF362


id: CL:2687
description: Glycerophospholipid metabolism, and Peptidase M28
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2687_Glycerophospholipid_metabolism,_and_Peptidase_M28


id: CL:2688
description: Glycerophospholipid metabolism, and Peptidase M28
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2688_Glycerophospholipid_metabolism,_and_Peptidase_M28


id: CL:2690
description: Phospholipid metabolism, and CDP-alcohol phosphatidyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2690_Phospholipid_metabolism,_and_CDP-alcohol_phosphatidyltransferase


id: CL:2692
description: CDP-alcohol phosphatidyltransferase, and Glycerolipid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2692_CDP-alcohol_phosphatidyltransferase,_and_Glycerolipid_biosynthetic_process


id: CL:2722
description: Mixed, incl. Cardiolipin metabolic process, and DNA methylation on cytosine
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2722_Mixed,_incl._Cardiolipin_metabolic_process,_and_DNA_methylation_on_cytosine


id: CL:2737
description: Mixed, incl. Plasma membrane region, and Monocarboxylic acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2737_Mixed,_incl._Plasma_membrane_region,_and_Monocarboxylic_acid_transport


id: CL:2746
description: Mixed, incl. Domain of unknown function DUF362, and Inositol phosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2746_Mixed,_incl._Domain_of_unknown_function_DUF362,_and_Inositol_phosphate_metabolic_process


id: CL:2748
description: Inositol phosphate metabolic process, and ATP-sulfurylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2748_Inositol_phosphate_metabolic_process,_and_ATP-sulfurylase


id: CL:2750
description: Inositol monophosphatase-like, and Inositol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2750_Inositol_monophosphatase-like,_and_Inositol_metabolic_process


id: CL:2773
description: Mixed, incl. Domain of unknown function DUF362, and Aldo/keto reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2773_Mixed,_incl._Domain_of_unknown_function_DUF362,_and_Aldo/keto_reductase_family


id: CL:2775
description: Mixed, incl. PurE domain, and NAD synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2775_Mixed,_incl._PurE_domain,_and_NAD_synthase


id: CL:2793
description: Mixed, incl. Deacetylase activity, and Sister chromatid cohesion
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2793_Mixed,_incl._Deacetylase_activity,_and_Sister_chromatid_cohesion


id: CL:2796
description: Mixed, incl. Histone deacetylase domain, and Amine oxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2796_Mixed,_incl._Histone_deacetylase_domain,_and_Amine_oxidase


id: CL:2800
description: Histone deacetylase domain, and Amine oxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2800_Histone_deacetylase_domain,_and_Amine_oxidase


id: CL:282
description: Mixed, incl. RF-1 domain, and UTP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:282_Mixed,_incl._RF-1_domain,_and_UTP_metabolic_process


id: CL:2820
description: Mixed, incl. DJ-1/PfpI, and Creatinine amidohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2820_Mixed,_incl._DJ-1/PfpI,_and_Creatinine_amidohydrolase


id: CL:2832
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2832_Mixed,_incl._S-adenosyl-L-methionine-dependent_methyltransferase_superfamily,_and_Epimerase_family_protein_SDR39U1

description:
  Mixed, incl. S-adenosyl-L-methionine-dependent methyltransferase superfamily, and Epimerase family protein SDR39U1


id: CL:2833
description: Mixed, incl. Methyltransferase domain 25, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2833_Mixed,_incl._Methyltransferase_domain_25,_and_Methyltransferase_domain


id: CL:2835
description: Mixed, incl. Amine oxidase, and Steroid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2835_Mixed,_incl._Amine_oxidase,_and_Steroid_biosynthesis


id: CL:2852
description: Mixed, incl. Methyltransferase type 11, and Biotin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2852_Mixed,_incl._Methyltransferase_type_11,_and_Biotin_metabolic_process


id: CL:2866
description: Mixed, incl. Epimerase family protein SDR39U1, and NAD(+) synthetase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2866_Mixed,_incl._Epimerase_family_protein_SDR39U1,_and_NAD(+)_synthetase


id: CL:2869
description: Mixed, incl. Protein processing, and Regulation of cell cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2869_Mixed,_incl._Protein_processing,_and_Regulation_of_cell_cycle


id: CL:2887
description: Mostly uncharacterized, incl. Universal stress protein A family, and Methyltransferase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2887_Mostly_uncharacterized,_incl._Universal_stress_protein_A_family,_and_Methyltransferase_complex


id: CL:2888
description: Mixed, incl. Universal stress protein A family, and RNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2888_Mixed,_incl._Universal_stress_protein_A_family,_and_RNA_ligase_activity


id: CL:2889
description: Mixed, incl. Universal stress protein A family, and RNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2889_Mixed,_incl._Universal_stress_protein_A_family,_and_RNA_ligase_activity


id: CL:2890
description: Mixed, incl. RNA ligase activity, and Creatinase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2890_Mixed,_incl._RNA_ligase_activity,_and_Creatinase,_N-terminal


id: CL:2905
description: Universal stress protein A family, and Beta-keto acid cleavage enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2905_Universal_stress_protein_A_family,_and_Beta-keto_acid_cleavage_enzyme


id: CL:2914
description: Mixed, incl. KH domain, and Lon protease (S16) C-terminal proteolytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2914_Mixed,_incl._KH_domain,_and_Lon_protease_(S16)_C-terminal_proteolytic_domain


id: CL:2926
description: Methyltransferase complex, and tRNA thiolation protein, TtcA/Ctu1 type
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2926_Methyltransferase_complex,_and_tRNA_thiolation_protein,_TtcA/Ctu1_type


id: CL:2941
description: Mixed, incl. Helix-hairpin-helix motif, and Deoxyribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2941_Mixed,_incl._Helix-hairpin-helix_motif,_and_Deoxyribonuclease_activity


id: CL:2942
description: Mixed, incl. Endonuclease III, and Deoxyribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2942_Mixed,_incl._Endonuclease_III,_and_Deoxyribonuclease_activity


id: CL:2944
description: Endonuclease III, and Endonuclease/exonuclease/phosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2944_Endonuclease_III,_and_Endonuclease/exonuclease/phosphatase


id: CL:2960
description: Mixed, incl. NUDIX domain, and Endonuclease III
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2960_Mixed,_incl._NUDIX_domain,_and_Endonuclease_III


id: CL:2969
description: Mixed, incl. NUDIX domain, and Peptidase M50
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2969_Mixed,_incl._NUDIX_domain,_and_Peptidase_M50


id: CL:2981
description: Mixed, incl. Potassium ion transport, and Antiporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2981_Mixed,_incl._Potassium_ion_transport,_and_Antiporter_activity


id: CL:2982
description: Mixed, incl. Potassium ion transport, and Antiporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2982_Mixed,_incl._Potassium_ion_transport,_and_Antiporter_activity


id: CL:2984
description: Mixed, incl. Potassium ion transport, and Citrate transporter-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2984_Mixed,_incl._Potassium_ion_transport,_and_Citrate_transporter-like_domain


id: CL:2987
description: Potassium ion transport, and Citrate transporter-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2987_Potassium_ion_transport,_and_Citrate_transporter-like_domain


id: CL:2989
description: Potassium transport, and Chloride channel, core
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:2989_Potassium_transport,_and_Chloride_channel,_core


id: CL:3019
description: Mixed, incl. LSM domain superfamily, and Aldehyde dehydrogenase, cysteine active site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3019_Mixed,_incl._LSM_domain_superfamily,_and_Aldehyde_dehydrogenase,_cysteine_active_site


id: CL:3021
description: Mixed, incl. LSM domain superfamily, and Aldehyde dehydrogenase, cysteine active site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3021_Mixed,_incl._LSM_domain_superfamily,_and_Aldehyde_dehydrogenase,_cysteine_active_site


id: CL:3031
description: Mixed, incl. Amino acid permease, and Transposase, IS4-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3031_Mixed,_incl._Amino_acid_permease,_and_Transposase,_IS4-like


id: CL:3045
description: Mixed, incl. Antibiotic resistance, and SNARE associated Golgi protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3045_Mixed,_incl._Antibiotic_resistance,_and_SNARE_associated_Golgi_protein


id: CL:305
description: Proton-transporting ATP synthase complex, catalytic core F(1)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:305_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: CL:3055
description: Mixed, incl. Polysaccharide metabolic process, and Amino sugar and nucleotide sugar metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3055_Mixed,_incl._Polysaccharide_metabolic_process,_and_Amino_sugar_and_nucleotide_sugar_metabolism


id: CL:3056
description: Mixed, incl. Polysaccharide metabolic process, and Glycosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3056_Mixed,_incl._Polysaccharide_metabolic_process,_and_Glycosylation


id: CL:3057
description: Mixed, incl. Polysaccharide metabolic process, and Glycosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3057_Mixed,_incl._Polysaccharide_metabolic_process,_and_Glycosylation


id: CL:3059
description: Mixed, incl. Polysaccharide metabolic process, and Glycosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3059_Mixed,_incl._Polysaccharide_metabolic_process,_and_Glycosylation


id: CL:3060
description: Mixed, incl. Polysaccharide biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3060_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:3062
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3062_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyltransferase_subfamily_4-like,_N-terminal_domain

description:
  Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyltransferase subfamily 4-like, N-terminal domain


id: CL:3064
description: O-Antigen nucleotide sugar biosynthesis, and Galactose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3064_O-Antigen_nucleotide_sugar_biosynthesis,_and_Galactose_metabolic_process


id: CL:3065
description: O-Antigen nucleotide sugar biosynthesis, and Galactose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3065_O-Antigen_nucleotide_sugar_biosynthesis,_and_Galactose_metabolic_process


id: CL:3067
description: O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3067_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:3069
description: Polyketide sugar unit biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3069_Polyketide_sugar_unit_biosynthesis


id: CL:3100
description: Mixed, incl. MobA-like NTP transferase domain, and GlmS/AgaS, SIS domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3100_Mixed,_incl._MobA-like_NTP_transferase_domain,_and_GlmS/AgaS,_SIS_domain_1


id: CL:3118
description: Glycosyltransferase subfamily 4-like, N-terminal domain, and Glycogen biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3118_Glycosyltransferase_subfamily_4-like,_N-terminal_domain,_and_Glycogen_biosynthesis


id: CL:3119
description: Glycosyltransferase Family 4, and Sulfotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3119_Glycosyltransferase_Family_4,_and_Sulfotransferase


id: CL:3143
description: Glycogen biosynthesis, and Glycoside hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3143_Glycogen_biosynthesis,_and_Glycoside_hydrolase_superfamily


id: CL:3160
description: Mixed, incl. Wzt, C-terminal, and ABC-2 type transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3160_Mixed,_incl._Wzt,_C-terminal,_and_ABC-2_type_transporter


id: CL:3162
description: Mixed, incl. Wzt, C-terminal, and ABC-2 type transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3162_Mixed,_incl._Wzt,_C-terminal,_and_ABC-2_type_transporter


id: CL:3176
description: Mixed, incl. Mannosylation, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3176_Mixed,_incl._Mannosylation,_and_Methyltransferase_domain


id: CL:3185
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3185_Mixed,_incl._Polysaccharide_metabolic_process,_and_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain

description:
  Mixed, incl. Polysaccharide metabolic process, and Proton-transporting two-sector ATPase complex, proton-transporting domain


id: CL:3186
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3186_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain

description:
  Mixed, incl. Polysaccharide biosynthetic process, and Proton-transporting two-sector ATPase complex, proton-transporting domain


id: CL:3187
description: Mixed, incl. Polysaccharide biosynthetic process, and Polysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3187_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Polysaccharide_transport


id: CL:3189
description: Mixed, incl. Polysaccharide transport, and Glycosyl transferase 4-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3189_Mixed,_incl._Polysaccharide_transport,_and_Glycosyl_transferase_4-like_domain


id: CL:3191
description: Glycosyl transferase 4-like domain, and BioF2-like, acetyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3191_Glycosyl_transferase_4-like_domain,_and_BioF2-like,_acetyltransferase_domain


id: CL:3205
description: Mixed, incl. CoA-binding domain, and Protein tyrosine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3205_Mixed,_incl._CoA-binding_domain,_and_Protein_tyrosine_kinase_activity


id: CL:3216
description: Mixed, incl. Glycosyltransferase like family 2, and Capsule organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3216_Mixed,_incl._Glycosyltransferase_like_family_2,_and_Capsule_organization


id: CL:3218
description: Mixed, incl. Polysaccharide deacetylase, and Phenylacetate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3218_Mixed,_incl._Polysaccharide_deacetylase,_and_Phenylacetate_catabolic_process


id: CL:3228
description: Glycosyltransferase like family 2, and Sulfotransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3228_Glycosyltransferase_like_family_2,_and_Sulfotransferase_family


id: CL:3240
description: Mixed, incl. Vacuolar membrane, and Lipid-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3240_Mixed,_incl._Vacuolar_membrane,_and_Lipid-binding


id: CL:3251
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3251_Mixed,_incl._Aminoglycan_catabolic_process,_and_Glycosyltransferase_subfamily_4-like,_N-terminal_domain

description:
  Mixed, incl. Aminoglycan catabolic process, and Glycosyltransferase subfamily 4-like, N-terminal domain


id: CL:3254
description: Mixed, incl. FG-GAP repeat, and Glycosyl transferase, family 28, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3254_Mixed,_incl._FG-GAP_repeat,_and_Glycosyl_transferase,_family_28,_C-terminal


id: CL:3272
description: Mixed, incl. Sulfotransferase domain, and Glutamine amidotransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3272_Mixed,_incl._Sulfotransferase_domain,_and_Glutamine_amidotransferase_domain


id: CL:3289
description: Mixed, incl. cysteine-tRNA ligase activity, and BioF2-like, acetyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3289_Mixed,_incl._cysteine-tRNA_ligase_activity,_and_BioF2-like,_acetyltransferase_domain


id: CL:3302
description: Cellulose metabolic process, and Polysaccharide catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3302_Cellulose_metabolic_process,_and_Polysaccharide_catabolic_process


id: CL:3311
description: Mixed, incl. Protein of unknown function DUF488, and Smr domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3311_Mixed,_incl._Protein_of_unknown_function_DUF488,_and_Smr_domain


id: CL:3314
description: Mixed, incl. Phenol-containing compound catabolic process, and GntR, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3314_Mixed,_incl._Phenol-containing_compound_catabolic_process,_and_GntR,_C-terminal


id: CL:332
description: Mixed, incl. PEBP-like superfamily, and Aconitase family, 4Fe-4S cluster binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:332_Mixed,_incl._PEBP-like_superfamily,_and_Aconitase_family,_4Fe-4S_cluster_binding_site


id: CL:3334
description: Mixed, incl. Macromolecule localization, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3334_Mixed,_incl._Macromolecule_localization,_and_Lipopolysaccharide_biosynthesis


id: CL:3335
description: Mixed, incl. Macromolecule localization, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3335_Mixed,_incl._Macromolecule_localization,_and_Lipopolysaccharide_biosynthesis


id: CL:3336
description: Mixed, incl. Lipopolysaccharide biosynthesis, and Membrane organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3336_Mixed,_incl._Lipopolysaccharide_biosynthesis,_and_Membrane_organization


id: CL:3337
description: Membrane organization, and Macromolecule localization
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3337_Membrane_organization,_and_Macromolecule_localization


id: CL:3338
description: Mixed, incl. Membrane assembly, and Lipoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3338_Mixed,_incl._Membrane_assembly,_and_Lipoprotein


id: CL:3339
description: Mixed, incl. Membrane assembly, and Lipoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3339_Mixed,_incl._Membrane_assembly,_and_Lipoprotein


id: CL:3340
description: Mixed, incl. Protein insertion into membrane, and Lipoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3340_Mixed,_incl._Protein_insertion_into_membrane,_and_Lipoprotein


id: CL:3343
description: Bacteriocin transport, and Periplasm
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3343_Bacteriocin_transport,_and_Periplasm


id: CL:3361
description: Gram-negative-bacterium-type cell outer membrane assembly, and Lipoprotein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3361_Gram-negative-bacterium-type_cell_outer_membrane_assembly,_and_Lipoprotein_transport


id: CL:3376
description: Permease LptG/LptF-related, and Lipopolysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3376_Permease_LptG/LptF-related,_and_Lipopolysaccharide_transport


id: CL:3389
description: Mixed, incl. TonB/TolA, C-terminal, and Biopolymer transport protein ExbD/TolR
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3389_Mixed,_incl._TonB/TolA,_C-terminal,_and_Biopolymer_transport_protein_ExbD/TolR


id: CL:3423
description: Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3423_Lipopolysaccharide_biosynthesis


id: CL:3426
description: Lipid A biosynthesis, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3426_Lipid_A_biosynthesis,_and_Lipopolysaccharide_biosynthesis


id: CL:3428
description: Lipopolysaccharide biosynthesis, and Lipid A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3428_Lipopolysaccharide_biosynthesis,_and_Lipid_A_biosynthesis


id: CL:345
description: SRP54-type protein, helical bundle domain, and Protein-transporting ATPase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:345_SRP54-type_protein,_helical_bundle_domain,_and_Protein-transporting_ATPase_activity


id: CL:3451
description: Mixed, incl. Glycosyl transferase, family 9, and Phosphomethylpyrimidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3451_Mixed,_incl._Glycosyl_transferase,_family_9,_and_Phosphomethylpyrimidine_kinase


id: CL:3469
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3469_Mixed,_incl._Efflux_transmembrane_transporter_activity,_and_RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain

description:
  Mixed, incl. Efflux transmembrane transporter activity, and RND efflux pump, membrane fusion protein, barrel-sandwich domain


id: CL:3470
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3470_Mixed,_incl._Efflux_transmembrane_transporter_activity,_and_RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain

description:
  Mixed, incl. Efflux transmembrane transporter activity, and RND efflux pump, membrane fusion protein, barrel-sandwich domain


id: CL:3471
description: Efflux transmembrane transporter activity, and HlyD family secretion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3471_Efflux_transmembrane_transporter_activity,_and_HlyD_family_secretion_protein


id: CL:3473
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3473_Efflux_transmembrane_transporter_activity,_and_RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain

description:
  Efflux transmembrane transporter activity, and RND efflux pump, membrane fusion protein, barrel-sandwich domain


id: CL:3474
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3474_Efflux_transmembrane_transporter_activity,_and_RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain

description:
  Efflux transmembrane transporter activity, and RND efflux pump, membrane fusion protein, barrel-sandwich domain


id: CL:3476
description: Efflux transmembrane transporter activity, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3476_Efflux_transmembrane_transporter_activity,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:3499
description: MacB-like periplasmic core domain, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3499_MacB-like_periplasmic_core_domain,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:3529
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3529_Mixed,_incl._Tetracycline_resistance_protein_TetA/multidrug_resistance_protein_MdtG,_and_Sugar_transporter,_conserved_site

description:
  Mixed, incl. Tetracycline resistance protein TetA/multidrug resistance protein MdtG, and Sugar transporter, conserved site


id: CL:3545
description: Mixed, incl. Putative outer membrane lipoprotein-sorting protein, and Lipoprotein localization
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3545_Mixed,_incl._Putative_outer_membrane_lipoprotein-sorting_protein,_and_Lipoprotein_localization


id: CL:3549
description: Mixed, incl. Antibiotic metabolic process, and Putative outer membrane lipoprotein-sorting protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3549_Mixed,_incl._Antibiotic_metabolic_process,_and_Putative_outer_membrane_lipoprotein-sorting_protein


id: CL:3562
description: Mixed, incl. Pyridoxamine 5-phosphate oxidase, and Lipoprotein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3562_Mixed,_incl._Pyridoxamine_5-phosphate_oxidase,_and_Lipoprotein_transport


id: CL:3574
description: Mixed, incl. SurA N-terminal domain, and Transglycosylase SLT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3574_Mixed,_incl._SurA_N-terminal_domain,_and_Transglycosylase_SLT_domain


id: CL:3604
description: Signaling, and Bacterial regulatory protein, Fis family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3604_Signaling,_and_Bacterial_regulatory_protein,_Fis_family


id: CL:3606
description: Signaling, and MCP methyltransferase, CheR-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3606_Signaling,_and_MCP_methyltransferase,_CheR-type


id: CL:3627
description: Histidine kinase domain, and CheY-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3627_Histidine_kinase_domain,_and_CheY-like_superfamily


id: CL:3630
description: Histidine kinase domain, and cheY-homologous receiver domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3630_Histidine_kinase_domain,_and_cheY-homologous_receiver_domain


id: CL:3632
description: Histidine kinase domain, and cheY-homologous receiver domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3632_Histidine_kinase_domain,_and_cheY-homologous_receiver_domain


id: CL:3635
description: Histidine kinase domain, and Transcriptional regulatory protein WalR-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3635_Histidine_kinase_domain,_and_Transcriptional_regulatory_protein_WalR-like


id: CL:3637
description: Histidine kinase domain, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3637_Histidine_kinase_domain,_and_Diguanylate_cyclase


id: CL:3640
description: Histidine kinase domain, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3640_Histidine_kinase_domain,_and_Diguanylate_cyclase


id: CL:3642
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3642_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain_superfamily,_and_Diguanylate_cyclase

description:
  Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily, and Diguanylate cyclase


id: CL:3646
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3646_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain_superfamily,_and_Diguanylate_cyclase

description:
  Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily, and Diguanylate cyclase


id: CL:3650
description: Signal transduction histidine kinase, dimerisation/phosphoacceptor domain, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3650_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain,_and_Diguanylate_cyclase


id: CL:3653
description: Signal transduction histidine kinase, dimerisation/phosphoacceptor domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3653_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain


id: CL:3655
description: Signal transduction histidine kinase, dimerisation/phosphoacceptor domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3655_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain


id: CL:3658
description: Signal transduction histidine kinase, dimerisation/phosphoacceptor domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3658_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain


id: CL:3661
description: Signal transduction histidine kinase, dimerisation/phosphoacceptor domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3661_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain


id: CL:3663
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3663_Motif_C-terminal_to_PAS_motifs_(likely_to_contribute_to_PAS_structural_domain),_and_Two_component_regulator_propeller

description:
  Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain), and Two component regulator propeller


id: CL:3666
description: Mixed, incl. PAC motif, and Two component regulator propeller
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3666_Mixed,_incl._PAC_motif,_and_Two_component_regulator_propeller


id: CL:3670
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3670_Motif_C-terminal_to_PAS_motifs_(likely_to_contribute_to_PAS_structural_domain),_and_Two_component_regulator_propeller

description:
  Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain), and Two component regulator propeller


id: CL:370
description: Mixed, incl. Ribosome biogenesis, and tRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:370_Mixed,_incl._Ribosome_biogenesis,_and_tRNA_pseudouridine_synthesis


id: CL:3818
description: Protein-glutamine glutaminase activity, and CheW-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3818_Protein-glutamine_glutaminase_activity,_and_CheW-like_domain


id: CL:3819
description: CheW-like domain, and Demethylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3819_CheW-like_domain,_and_Demethylation


id: CL:3828
description: Protein-glutamine glutaminase activity, and Cache 3/Cache 2 fusion domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3828_Protein-glutamine_glutaminase_activity,_and_Cache_3/Cache_2_fusion_domain


id: CL:385
description: tRNA aminoacylation, and glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:385_tRNA_aminoacylation,_and_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: CL:3885
description: Mixed, incl. C-type lectin fold, and Calcineurin-like phosphoesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3885_Mixed,_incl._C-type_lectin_fold,_and_Calcineurin-like_phosphoesterase


id: CL:391
description: Aminoacyl-tRNA synthetase, class I, conserved site, and lysyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:391_Aminoacyl-tRNA_synthetase,_class_I,_conserved_site,_and_lysyl-tRNA_aminoacylation


id: CL:3910
description: Sigma-54 interaction domain, ATP-binding site 2, and DNA-binding transcription activator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3910_Sigma-54_interaction_domain,_ATP-binding_site_2,_and_DNA-binding_transcription_activator_activity


id: CL:3915
description: Sigma-54 interaction domain, ATP-binding site 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3915_Sigma-54_interaction_domain,_ATP-binding_site_2


id: CL:3947
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3947_Mixed,_incl._Transcriptional_regulatory_protein_WalR-like,_and_Dinitrogenase_iron-molybdenum_cofactor_biosynthesis_superfamily

description:
  Mixed, incl. Transcriptional regulatory protein WalR-like, and Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily


id: CL:3977
description: Bacterial-type flagellum basal body, and Bacterial flagellum biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3977_Bacterial-type_flagellum_basal_body,_and_Bacterial_flagellum_biogenesis


id: CL:3978
description: Bacterial-type flagellum basal body
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3978_Bacterial-type_flagellum_basal_body


id: CL:3981
description: Bacterial-type flagellum basal body, rod, and Flagellar hook-basal body protein, FlgE/F/G
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3981_Bacterial-type_flagellum_basal_body,_rod,_and_Flagellar_hook-basal_body_protein,_FlgE/F/G


id: CL:3998
description: SpoA-like superfamily, and Protein secretion by the type III secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:3998_SpoA-like_superfamily,_and_Protein_secretion_by_the_type_III_secretion_system


id: CL:4008
description: Bacterial flagellum protein export, and Bacterial-type flagellum assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4008_Bacterial_flagellum_protein_export,_and_Bacterial-type_flagellum_assembly


id: CL:4072
description: Mixed, incl. Sulfite exporter TauE/SafE, and Citrate transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4072_Mixed,_incl._Sulfite_exporter_TauE/SafE,_and_Citrate_transporter


id: CL:4074
description: Mixed, incl. Cache domain, and Transcriptional regulatory protein WalR-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4074_Mixed,_incl._Cache_domain,_and_Transcriptional_regulatory_protein_WalR-like


id: CL:4086
description: Mixed, incl. Sulfite exporter TauE/SafE, and Citrate transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4086_Mixed,_incl._Sulfite_exporter_TauE/SafE,_and_Citrate_transporter


id: CL:4101
description: Metal-dependent hydrolase HDOD, and Cell-substrate adhesion
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4101_Metal-dependent_hydrolase_HDOD,_and_Cell-substrate_adhesion


id: CL:413
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:413_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_Aspartyl/Asparaginyl-tRNA_synthetase,_class_IIb

description:
  glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and Aspartyl/Asparaginyl-tRNA synthetase, class IIb


id: CL:4143
description: Mixed, incl. Regulation of cell motility, and Peptidyl-histidine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4143_Mixed,_incl._Regulation_of_cell_motility,_and_Peptidyl-histidine_modification


id: CL:4156
description: ABC transporter substrate binding protein, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4156_ABC_transporter_substrate_binding_protein,_and_ABC_transporter,_permease


id: CL:4165
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4165_Mixed,_incl._Phosphoenolpyruvate-protein_phosphotransferase_activity,_and_tRNA-dihydrouridine_synthase

description:
  Mixed, incl. Phosphoenolpyruvate-protein phosphotransferase activity, and tRNA-dihydrouridine synthase


id: CL:4168
description: Mixed, incl. Phosphoenolpyruvate synthase, and Carboxymuconolactone decarboxylase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4168_Mixed,_incl._Phosphoenolpyruvate_synthase,_and_Carboxymuconolactone_decarboxylase-like


id: CL:4181
description: Mixed, incl. tRNA-dihydrouridine synthase, and Glutathione oxidoreductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4181_Mixed,_incl._tRNA-dihydrouridine_synthase,_and_Glutathione_oxidoreductase_activity


id: CL:4195
description: Mixed, incl. Sulfite exporter TauE/SafE, and Phosphate transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4195_Mixed,_incl._Sulfite_exporter_TauE/SafE,_and_Phosphate_transporter


id: CL:4197
description: Mixed, incl. Phosphate transporter, and Protein of unknown function DUF47
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4197_Mixed,_incl._Phosphate_transporter,_and_Protein_of_unknown_function_DUF47


id: CL:4214
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4214_Mixed,_incl._Uncharacterised_protein_family_UPF0066,_conserved_site,_and_Beta-keto_acid_cleavage_enzyme

description:
  Mixed, incl. Uncharacterised protein family UPF0066, conserved site, and Beta-keto acid cleavage enzyme


id: CL:4226
description: Mixed, incl. Bacterial secretion system, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4226_Mixed,_incl._Bacterial_secretion_system,_and_Pilus_organization


id: CL:4228
description: Mixed, incl. Pilus organization, and Protein transport across the cell outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4228_Mixed,_incl._Pilus_organization,_and_Protein_transport_across_the_cell_outer_membrane


id: CL:4229
description: Mixed, incl. Pilus organization, and Bacterial secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4229_Mixed,_incl._Pilus_organization,_and_Bacterial_secretion_system


id: CL:4231
description: Mixed, incl. Pilus organization, and Type II secretion system protein GspE, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4231_Mixed,_incl._Pilus_organization,_and_Type_II_secretion_system_protein_GspE,_N-terminal


id: CL:4232
description: Type II/IV secretion system protein, and Pilus assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4232_Type_II/IV_secretion_system_protein,_and_Pilus_assembly


id: CL:4235
description: Pilus assembly, and Cell division protein FtsA
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4235_Pilus_assembly,_and_Cell_division_protein_FtsA


id: CL:4253
description: Pilus, and ChlI/MoxR, AAA lid domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4253_Pilus,_and_ChlI/MoxR,_AAA_lid_domain


id: CL:4266
description: Horizontal gene transfer, and Magnesium chelatase ChlI-like, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4266_Horizontal_gene_transfer,_and_Magnesium_chelatase_ChlI-like,_catalytic_domain


id: CL:427
description: Mixed, incl. RNA pseudouridylate synthase, and Ribosome assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:427_Mixed,_incl._RNA_pseudouridylate_synthase,_and_Ribosome_assembly


id: CL:428
description: RNA pseudouridylate synthase, and SpoU rRNA Methylase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:428_RNA_pseudouridylate_synthase,_and_SpoU_rRNA_Methylase_family


id: CL:4280
description: Pilin-like, and Prokaryotic N-terminal methylation site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4280_Pilin-like,_and_Prokaryotic_N-terminal_methylation_site


id: CL:4306
description: Mixed, incl. Ubiquinone and other terpenoid-quinone biosynthesis, and Hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4306_Mixed,_incl._Ubiquinone_and_other_terpenoid-quinone_biosynthesis,_and_Hydrolase_activity


id: CL:4308
description: Mixed, incl. Hydrolase activity, and UspA
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4308_Mixed,_incl._Hydrolase_activity,_and_UspA


id: CL:4309
description: Mixed, incl. UspA, and Hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4309_Mixed,_incl._UspA,_and_Hydrolase_activity


id: CL:431
description: Mixed, incl. GTP-binding protein Era, and RNA (guanine-N7)-methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:431_Mixed,_incl._GTP-binding_protein_Era,_and_RNA_(guanine-N7)-methylation


id: CL:4310
description: Mostly uncharacterized, incl. Tetratricopeptide-like helical domain superfamily, and UspA
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4310_Mostly_uncharacterized,_incl._Tetratricopeptide-like_helical_domain_superfamily,_and_UspA


id: CL:4311
description: Mostly uncharacterized, incl. UspA, and Tetratricopeptide-like helical domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4311_Mostly_uncharacterized,_incl._UspA,_and_Tetratricopeptide-like_helical_domain_superfamily


id: CL:4312
description: Mostly uncharacterized, incl. UspA, and Tetratricopeptide-like helical domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4312_Mostly_uncharacterized,_incl._UspA,_and_Tetratricopeptide-like_helical_domain_superfamily


id: CL:4314
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4314_Mostly_uncharacterized,_incl._Export_from_cell,_and_Tetratricopeptide-like_helical_domain_superfamily

description:
  Mostly uncharacterized, incl. Export from cell, and Tetratricopeptide-like helical domain superfamily


id: CL:4315
description: Mostly uncharacterized, incl. ATP-grasp fold, RimK-type, and Photosynthesis - antenna proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4315_Mostly_uncharacterized,_incl._ATP-grasp_fold,_RimK-type,_and_Photosynthesis_-_antenna_proteins


id: CL:4317
description: Mostly uncharacterized, incl. Photosynthesis - antenna proteins, and Class III cytochrome C
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4317_Mostly_uncharacterized,_incl._Photosynthesis_-_antenna_proteins,_and_Class_III_cytochrome_C


id: CL:4318
description: Mostly uncharacterized, incl. Photosynthesis - antenna proteins, and Amidohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4318_Mostly_uncharacterized,_incl._Photosynthesis_-_antenna_proteins,_and_Amidohydrolase


id: CL:4320
description: Mostly uncharacterized, incl. Amidohydrolase, and Cytochrome c, class III
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4320_Mostly_uncharacterized,_incl._Amidohydrolase,_and_Cytochrome_c,_class_III


id: CL:4322
description: Mostly uncharacterized, incl. Amidohydrolase, and Cytochrome c, class III
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4322_Mostly_uncharacterized,_incl._Amidohydrolase,_and_Cytochrome_c,_class_III


id: CL:4326
description: Mixed, incl. Amidohydrolase, and Photosynthesis - antenna proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4326_Mixed,_incl._Amidohydrolase,_and_Photosynthesis_-_antenna_proteins


id: CL:4370
description: Mixed, incl. FG-GAP repeat, and Zinc finger/thioredoxin putative
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4370_Mixed,_incl._FG-GAP_repeat,_and_Zinc_finger/thioredoxin_putative


id: CL:4391
description: Mixed, incl. Sulphur relay, DsrE/F-like, and Rubrerythrin, diiron-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4391_Mixed,_incl._Sulphur_relay,_DsrE/F-like,_and_Rubrerythrin,_diiron-binding_domain


id: CL:4400
description: Mixed, incl. Export from cell, and Tetratricopeptide repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4400_Mixed,_incl._Export_from_cell,_and_Tetratricopeptide_repeats


id: CL:4402
description: Mostly uncharacterized, incl. Tetratricopeptide repeats, and UspA
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4402_Mostly_uncharacterized,_incl._Tetratricopeptide_repeats,_and_UspA


id: CL:4403
description: Mixed, incl. Tetratricopeptide repeats, and VanZ-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4403_Mixed,_incl._Tetratricopeptide_repeats,_and_VanZ-like


id: CL:4405
description: Mixed, incl. Tetratricopeptide repeats, and VanZ-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4405_Mixed,_incl._Tetratricopeptide_repeats,_and_VanZ-like


id: CL:4407
description: Mixed, incl. HEAT repeats, and Immunoglobulin-like fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4407_Mixed,_incl._HEAT_repeats,_and_Immunoglobulin-like_fold


id: CL:4427
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4427_Mixed,_incl._Glyoxalase/fosfomycin_resistance/dioxygenase_domain,_and_Acetyltransferase_(GNAT)_domain

description:
  Mixed, incl. Glyoxalase/fosfomycin resistance/dioxygenase domain, and Acetyltransferase (GNAT) domain


id: CL:4436
description: Mixed, incl. UPF0759 superfamily, and Heavy-metal resistance protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4436_Mixed,_incl._UPF0759_superfamily,_and_Heavy-metal_resistance_protein


id: CL:4437
description: Mixed, incl. UPF0759 superfamily, and Xylose isomerase-like TIM barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4437_Mixed,_incl._UPF0759_superfamily,_and_Xylose_isomerase-like_TIM_barrel


id: CL:4446
description: Heavy-metal resistance protein, and UspA
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4446_Heavy-metal_resistance_protein,_and_UspA


id: CL:4458
description: Mixed, incl. Translocation and assembly module TamB, and Surface antigen D15-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4458_Mixed,_incl._Translocation_and_assembly_module_TamB,_and_Surface_antigen_D15-like


id: CL:4474
description: Mixed, incl. Universal stress protein A family, and D-aminoacyl-tRNA deacylase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4474_Mixed,_incl._Universal_stress_protein_A_family,_and_D-aminoacyl-tRNA_deacylase-like_superfamily


id: CL:448
description: RNA helicase activity, and NUDIX hydrolase-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:448_RNA_helicase_activity,_and_NUDIX_hydrolase-like_domain_superfamily


id: CL:4486
description: Mixed, incl. Peptidase M48, and DDH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4486_Mixed,_incl._Peptidase_M48,_and_DDH_domain


id: CL:4502
description: Mostly uncharacterized, incl. PilZ domain, and Cellular metal ion homeostasis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4502_Mostly_uncharacterized,_incl._PilZ_domain,_and_Cellular_metal_ion_homeostasis


id: CL:4503
description: Mixed, incl. Cellular metal ion homeostasis, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4503_Mixed,_incl._Cellular_metal_ion_homeostasis,_and_Methyltransferase_domain


id: CL:4505
description: Mixed, incl. 4Fe-4S single cluster domain, and Flavodoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4505_Mixed,_incl._4Fe-4S_single_cluster_domain,_and_Flavodoxin


id: CL:4527
description: PilZ domain, and Domain of unknown function DUF3786
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4527_PilZ_domain,_and_Domain_of_unknown_function_DUF3786


id: CL:4543
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4543_Mostly_uncharacterized,_incl._Glycosyl_transferase,_family_28,_C-terminal,_and_FtsX-like_permease_family

description:
  Mostly uncharacterized, incl. Glycosyl transferase, family 28, C-terminal, and FtsX-like permease family


id: CL:4544
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4544_Mostly_uncharacterized,_incl._Glycosyl_transferase,_family_28,_C-terminal,_and_FtsX-like_permease_family

description:
  Mostly uncharacterized, incl. Glycosyl transferase, family 28, C-terminal, and FtsX-like permease family


id: CL:4546
description: Mixed, incl. Glycosyl transferase, family 28, C-terminal, and FtsX-like permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4546_Mixed,_incl._Glycosyl_transferase,_family_28,_C-terminal,_and_FtsX-like_permease_family


id: CL:4549
description: Mixed, incl. Glycosyl transferase, family 28, C-terminal, and FtsX-like permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4549_Mixed,_incl._Glycosyl_transferase,_family_28,_C-terminal,_and_FtsX-like_permease_family


id: CL:4550
description: Mixed, incl. Polysaccharide deacetylase, and Glycosyl transferase, family 28, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4550_Mixed,_incl._Polysaccharide_deacetylase,_and_Glycosyl_transferase,_family_28,_C-terminal


id: CL:4561
description: Mixed, incl. Peptidase M28, and Lipoprotein localization to membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4561_Mixed,_incl._Peptidase_M28,_and_Lipoprotein_localization_to_membrane


id: CL:4591
description: Mixed, incl. Dioxygenase, and Protein kinase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4591_Mixed,_incl._Dioxygenase,_and_Protein_kinase_domain


id: CL:4593
description: Mixed, incl. Dioxygenase, and Cytochrome c554 and c-prime
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4593_Mixed,_incl._Dioxygenase,_and_Cytochrome_c554_and_c-prime


id: CL:4610
description: Queuosine metabolic process, and RecJ, OB domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4610_Queuosine_metabolic_process,_and_RecJ,_OB_domain


id: CL:4612
description: Queuosine biosynthesis, and Queuosine salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4612_Queuosine_biosynthesis,_and_Queuosine_salvage


id: CL:4636
description: Mixed, incl. NADPH-dependent FMN reductase-like, and PrkA AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4636_Mixed,_incl._NADPH-dependent_FMN_reductase-like,_and_PrkA_AAA_domain


id: CL:4638
description: Mixed, incl. NADPH-dependent FMN reductase-like, and PrkA AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4638_Mixed,_incl._NADPH-dependent_FMN_reductase-like,_and_PrkA_AAA_domain


id: CL:464
description: Mixed, incl. RNA 5-end processing, and Protein carrier chaperone
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:464_Mixed,_incl._RNA_5-end_processing,_and_Protein_carrier_chaperone


id: CL:4640
description: PrkA AAA domain, and NADPH-dependent FMN reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4640_PrkA_AAA_domain,_and_NADPH-dependent_FMN_reductase


id: CL:4654
description: NADPH dehydrogenase (quinone) activity, and Calcineurin-like phosphoesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4654_NADPH_dehydrogenase_(quinone)_activity,_and_Calcineurin-like_phosphoesterase


id: CL:4671
description: Mixed, incl. Bifunctional nuclease domain, and Pyridoxamine 5-phosphate oxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4671_Mixed,_incl._Bifunctional_nuclease_domain,_and_Pyridoxamine_5-phosphate_oxidase


id: CL:4692
description: Mixed, incl. Response to virus, and Sister chromatid cohesion
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4692_Mixed,_incl._Response_to_virus,_and_Sister_chromatid_cohesion


id: CL:4693
description: Mostly uncharacterized, incl. Sister chromatid cohesion, and TonB box
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4693_Mostly_uncharacterized,_incl._Sister_chromatid_cohesion,_and_TonB_box


id: CL:4695
description: Mostly uncharacterized, incl. Sister chromatid cohesion, and TonB box
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4695_Mostly_uncharacterized,_incl._Sister_chromatid_cohesion,_and_TonB_box


id: CL:4696
description: Mixed, incl. Sister chromatid cohesion, and Endodeoxyribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4696_Mixed,_incl._Sister_chromatid_cohesion,_and_Endodeoxyribonuclease_activity


id: CL:4697
description: Mixed, incl. Sister chromatid cohesion, and Endodeoxyribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4697_Mixed,_incl._Sister_chromatid_cohesion,_and_Endodeoxyribonuclease_activity


id: CL:4699
description: Mixed, incl. Sister chromatid cohesion, and Endodeoxyribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4699_Mixed,_incl._Sister_chromatid_cohesion,_and_Endodeoxyribonuclease_activity


id: CL:4701
description: Sister chromatid cohesion, and Endodeoxyribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4701_Sister_chromatid_cohesion,_and_Endodeoxyribonuclease_activity


id: CL:4703
description: Sister chromatid cohesion, and Endodeoxyribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4703_Sister_chromatid_cohesion,_and_Endodeoxyribonuclease_activity


id: CL:4726
description: Mixed, incl. Glycosyl transferases group 1, and Xylose isomerase-like TIM barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4726_Mixed,_incl._Glycosyl_transferases_group_1,_and_Xylose_isomerase-like_TIM_barrel


id: CL:473
description: Band 7 domain, and Peptidase M41
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:473_Band_7_domain,_and_Peptidase_M41


id: CL:4745
description: Mixed, incl. Radical-activating enzyme, conserved site, and Sulfite exporter TauE/SafE
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4745_Mixed,_incl._Radical-activating_enzyme,_conserved_site,_and_Sulfite_exporter_TauE/SafE


id: CL:4756
description: Mixed, incl. Copper ion binding, and Sulfotransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4756_Mixed,_incl._Copper_ion_binding,_and_Sulfotransferase_domain


id: CL:4773
description: Mixed, incl. TonB box, and YaeB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4773_Mixed,_incl._TonB_box,_and_YaeB-like


id: CL:4776
description: TonB dependent receptor, and FMN-binding split barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4776_TonB_dependent_receptor,_and_FMN-binding_split_barrel


id: CL:4795
description: Mixed, incl. Phosphoesterase MJ0912, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4795_Mixed,_incl._Phosphoesterase_MJ0912,_and_Acetyltransferase_(GNAT)_domain


id: CL:4806
description: Mixed, incl. Response to virus, and Protein of unknown function DUF499
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4806_Mixed,_incl._Response_to_virus,_and_Protein_of_unknown_function_DUF499


id: CL:4807
description: Response to virus, and Basal transcription factors
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4807_Response_to_virus,_and_Basal_transcription_factors


id: CL:4808
description: Response to virus, and Basal transcription factors
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4808_Response_to_virus,_and_Basal_transcription_factors


id: CL:4810
description: Mixed, incl. Response to virus, and Basal transcription factors
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4810_Mixed,_incl._Response_to_virus,_and_Basal_transcription_factors


id: CL:4814
description: tRNA endonuclease-like domain superfamily, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4814_tRNA_endonuclease-like_domain_superfamily,_and_Response_to_virus


id: CL:4845
description: Antiviral defense, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4845_Antiviral_defense,_and_Response_to_virus


id: CL:4855
description: Maintenance of DNA repeat elements, and PD-(D/E)XK nuclease superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4855_Maintenance_of_DNA_repeat_elements,_and_PD-(D/E)XK_nuclease_superfamily


id: CL:4868
description: Mixed, incl. RAMP superfamily, and Protein of unknown function DUF499
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4868_Mixed,_incl._RAMP_superfamily,_and_Protein_of_unknown_function_DUF499


id: CL:4871
description: Mixed, incl. RAMP superfamily, and Protein of unknown function DUF499
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4871_Mixed,_incl._RAMP_superfamily,_and_Protein_of_unknown_function_DUF499


id: CL:4874
description: RAMP superfamily, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4874_RAMP_superfamily,_and_Response_to_virus


id: CL:4904
description: Mixed, incl. Zinc-ribbon domain, and ATP synthase I chain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4904_Mixed,_incl._Zinc-ribbon_domain,_and_ATP_synthase_I_chain


id: CL:491
description: Mixed, incl. Protein folding, and Transcription, DNA-templated
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:491_Mixed,_incl._Protein_folding,_and_Transcription,_DNA-templated


id: CL:492
description: Mixed, incl. Protein folding, and Tetratricopeptide-like helical domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:492_Mixed,_incl._Protein_folding,_and_Tetratricopeptide-like_helical_domain_superfamily


id: CL:4920
description: Mixed, incl. Protein maturation, and TAT protein transport complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4920_Mixed,_incl._Protein_maturation,_and_TAT_protein_transport_complex


id: CL:4921
description: Mixed, incl. Protein maturation, and Acylphosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4921_Mixed,_incl._Protein_maturation,_and_Acylphosphatase


id: CL:4922
description: Mixed, incl. Protein maturation, and Ferredoxin hydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4922_Mixed,_incl._Protein_maturation,_and_Ferredoxin_hydrogenase_activity


id: CL:4924
description: Protein maturation, and Ferredoxin hydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4924_Protein_maturation,_and_Ferredoxin_hydrogenase_activity


id: CL:4926
description: ATPase complex, and Protein maturation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4926_ATPase_complex,_and_Protein_maturation


id: CL:493
description: Protein folding, and Peptidase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:493_Protein_folding,_and_Peptidase_complex


id: CL:495
description: Protein folding, and Peptidase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:495_Protein_folding,_and_Peptidase_complex


id: CL:4953
description: Mixed, incl. Acylphosphatase, and DNA condensation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4953_Mixed,_incl._Acylphosphatase,_and_DNA_condensation


id: CL:4963
description: Mixed, incl. TAT protein transport complex, and Cytochrome c assembly protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4963_Mixed,_incl._TAT_protein_transport_complex,_and_Cytochrome_c_assembly_protein


id: CL:4965
description: TAT protein transport complex, and Cytochrome c assembly protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4965_TAT_protein_transport_complex,_and_Cytochrome_c_assembly_protein


id: CL:4989
description: Mixed, incl. Prosthetic group metabolic process, and Quinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4989_Mixed,_incl._Prosthetic_group_metabolic_process,_and_Quinone_metabolic_process


id: CL:4991
description: Prosthetic group metabolic process, and Aldehyde ferredoxin oxidoreductase, domain 3
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4991_Prosthetic_group_metabolic_process,_and_Aldehyde_ferredoxin_oxidoreductase,_domain_3


id: CL:4992
description: Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4992_Prosthetic_group_metabolic_process


id: CL:4995
description: Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4995_Prosthetic_group_metabolic_process


id: CL:4997
description: Mixed, incl. MoeA, C-terminal, domain IV, and Toxin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:4997_Mixed,_incl._MoeA,_C-terminal,_domain_IV,_and_Toxin_metabolic_process


id: CL:500
description: Heat shock protein 70 family, and Clp, repeat (R) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:500_Heat_shock_protein_70_family,_and_Clp,_repeat_(R)_domain


id: CL:5033
description: Bacterial extracellular solute-binding protein, and Phosphate transport system permease protein 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5033_Bacterial_extracellular_solute-binding_protein,_and_Phosphate_transport_system_permease_protein_1


id: CL:5054
description: Mixed, incl. Menaquinone biosynthesis, and Thiamine diphosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5054_Mixed,_incl._Menaquinone_biosynthesis,_and_Thiamine_diphosphate_metabolic_process


id: CL:5055
description: Menaquinone biosynthesis, and Ubiquinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5055_Menaquinone_biosynthesis,_and_Ubiquinone_metabolic_process


id: CL:5078
description: Thiamine diphosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5078_Thiamine_diphosphate_metabolic_process


id: CL:5098
description: Mixed, incl. Nitrogen fixation, and Regulation of nitrogen utilization
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5098_Mixed,_incl._Nitrogen_fixation,_and_Regulation_of_nitrogen_utilization


id: CL:5100
description: Regulation of nitrogen utilization, and Nitrogen fixation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5100_Regulation_of_nitrogen_utilization,_and_Nitrogen_fixation


id: CL:5102
description: Nitrogen fixation, and Nitrogen regulatory protein PII
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5102_Nitrogen_fixation,_and_Nitrogen_regulatory_protein_PII


id: CL:5124
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5124_Bifunctional_uridylyltransferase/uridylyl-removing_enzyme,_and_Nitrogen_regulatory_protein_P-II,_urydylation_site

description:
  Bifunctional uridylyltransferase/uridylyl-removing enzyme, and Nitrogen regulatory protein P-II, urydylation site


id: CL:5138
description: Mixed, incl. Dinitrogenase iron-molybdenum cofactor, and Putative regulatory protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5138_Mixed,_incl._Dinitrogenase_iron-molybdenum_cofactor,_and_Putative_regulatory_protein


id: CL:5139
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5139_Mixed,_incl._Dinitrogenase_iron-molybdenum_cofactor,_and_CobQ/CobB/MinD/ParA_nucleotide_binding_domain

description:
  Mixed, incl. Dinitrogenase iron-molybdenum cofactor, and CobQ/CobB/MinD/ParA nucleotide binding domain


id: CL:5143
description: Dinitrogenase iron-molybdenum cofactor, and NUBPL iron-transfer P-loop NTPase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5143_Dinitrogenase_iron-molybdenum_cofactor,_and_NUBPL_iron-transfer_P-loop_NTPase


id: CL:5162
description: Mixed, incl. Putative regulatory protein, and Mrp, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5162_Mixed,_incl._Putative_regulatory_protein,_and_Mrp,_conserved_site


id: CL:5173
description: Mixed, incl. Peptidase U32, and Ribosomal large subunit assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5173_Mixed,_incl._Peptidase_U32,_and_Ribosomal_large_subunit_assembly


id: CL:5174
description: Mixed, incl. Peptidase U32, and Ribosomal large subunit assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5174_Mixed,_incl._Peptidase_U32,_and_Ribosomal_large_subunit_assembly


id: CL:5175
description: Mixed, incl. Nucleotidyl transferase AbiEii toxin, Type IV TA system, and EF-G domain III/V-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5175_Mixed,_incl._Nucleotidyl_transferase_AbiEii_toxin,_Type_IV_TA_system,_and_EF-G_domain_III/V-like


id: CL:5184
description: Peptidase U32, and RNA 5-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5184_Peptidase_U32,_and_RNA_5-end_processing


id: CL:5195
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5195_Mixed,_incl._Protein_of_unknown_function_DUF2283,_and_OB-fold_nucleic_acid_binding_domain,_AA-tRNA_synthetase-type

description:
  Mixed, incl. Protein of unknown function DUF2283, and OB-fold nucleic acid binding domain, AA-tRNA synthetase-type


id: CL:5210
description: Mixed, incl. Cobalamin binding, and Prismane-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5210_Mixed,_incl._Cobalamin_binding,_and_Prismane-like_superfamily


id: CL:5211
description: Mixed, incl. Cobalamin binding, and Prismane-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5211_Mixed,_incl._Cobalamin_binding,_and_Prismane-like_superfamily


id: CL:5213
description: Mixed, incl. Prismane-like superfamily, and 4Fe-4S domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5213_Mixed,_incl._Prismane-like_superfamily,_and_4Fe-4S_domain


id: CL:5215
description: Mixed, incl. Prismane-like superfamily, and 4Fe-4S domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5215_Mixed,_incl._Prismane-like_superfamily,_and_4Fe-4S_domain


id: CL:5217
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5217_Mixed,_incl._Prismane-like_superfamily,_and_Nickel_insertion_ATPase/GTPase_(CO_dehydrogenase_maturation_factor),_CooC_type

description:
  Mixed, incl. Prismane-like superfamily, and Nickel insertion ATPase/GTPase (CO dehydrogenase maturation factor), CooC type


id: CL:5220
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5220_Mixed,_incl._Prismane-like_superfamily,_and_CO_dehydrogenase/acetyl-CoA_synthase_delta_subunit,_TIM_barrel

description:
  Mixed, incl. Prismane-like superfamily, and CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel


id: CL:5223
description: Prismane-like superfamily, and CO dehydrogenase/acetyl-CoA synthase delta subunit, TIM barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5223_Prismane-like_superfamily,_and_CO_dehydrogenase/acetyl-CoA_synthase_delta_subunit,_TIM_barrel


id: CL:5269
description: Mixed, incl. Cobalamin binding, and MttB-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5269_Mixed,_incl._Cobalamin_binding,_and_MttB-like_superfamily


id: CL:5270
description: Cobalamin binding, and RACo, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5270_Cobalamin_binding,_and_RACo,_C-terminal


id: CL:5273
description: B12 binding domain, and Methionine synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5273_B12_binding_domain,_and_Methionine_synthase_activity


id: CL:5288
description: Mixed, incl. B12 binding domain, and Sugar phosphate transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5288_Mixed,_incl._B12_binding_domain,_and_Sugar_phosphate_transporter


id: CL:5303
description: Mixed, incl. MttB-like superfamily, and Biotin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5303_Mixed,_incl._MttB-like_superfamily,_and_Biotin_metabolic_process


id: CL:5318
description: Mixed, incl. Response to lipid, and Domain of unknown function
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5318_Mixed,_incl._Response_to_lipid,_and_Domain_of_unknown_function


id: CL:5321
description: Mixed, incl. Uncharacterised ArCR, COG2043, and Epoxyqueuosine reductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5321_Mixed,_incl._Uncharacterised_ArCR,_COG2043,_and_Epoxyqueuosine_reductase_activity


id: CL:5339
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5339_Mostly_uncharacterized,_incl._Radical_SAM_domain-containing_protein,_N-terminal,_and_Inorganic_anion_transmembrane_transport

description:
  Mostly uncharacterized, incl. Radical SAM domain-containing protein, N-terminal, and Inorganic anion transmembrane transport


id: CL:5340
description: Mixed, incl. Deoxyribonuclease activity, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5340_Mixed,_incl._Deoxyribonuclease_activity,_and_Methyltransferase_domain


id: CL:5342
description: Mixed, incl. TatD related DNase, and Nucleotide diphosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5342_Mixed,_incl._TatD_related_DNase,_and_Nucleotide_diphosphatase_activity


id: CL:5357
description: Mixed, incl. 3-5-exoribonuclease activity, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5357_Mixed,_incl._3-5-exoribonuclease_activity,_and_Cell_division


id: CL:5367
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5367_Mixed,_incl._Radical_SAM_domain-containing_protein,_N-terminal,_and_Inorganic_anion_transmembrane_transport

description:
  Mixed, incl. Radical SAM domain-containing protein, N-terminal, and Inorganic anion transmembrane transport


id: CL:5370
description: Mixed, incl. ATP synthase I chain, and Chloride channel, core
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5370_Mixed,_incl._ATP_synthase_I_chain,_and_Chloride_channel,_core


id: CL:5390
description: Mixed, incl. DNA-binding HTH domain, TetR-type, and Acyl-CoA dehydrogenase, middle domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5390_Mixed,_incl._DNA-binding_HTH_domain,_TetR-type,_and_Acyl-CoA_dehydrogenase,_middle_domain


id: CL:5392
description: Mixed, incl. DNA-binding HTH domain, TetR-type, and ATPase, dynein-related, AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5392_Mixed,_incl._DNA-binding_HTH_domain,_TetR-type,_and_ATPase,_dynein-related,_AAA_domain


id: CL:5393
description: Mixed, incl. ATPase, dynein-related, AAA domain, and Uncharacterised protein family CoxE-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5393_Mixed,_incl._ATPase,_dynein-related,_AAA_domain,_and_Uncharacterised_protein_family_CoxE-like


id: CL:5395
description: ATPase, dynein-related, AAA domain, and Uncharacterised protein family CoxE-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5395_ATPase,_dynein-related,_AAA_domain,_and_Uncharacterised_protein_family_CoxE-like


id: CL:5415
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5415_HTH-type_transcriptional_repressor_KstR2,_C-terminal,_and_DNA-binding_HTH_domain,_TetR-type,_conserved_site

description:
  HTH-type transcriptional repressor KstR2, C-terminal, and DNA-binding HTH domain, TetR-type, conserved site


id: CL:543
description: Mixed, incl. ATPase-coupled lipid transmembrane transporter activity, and Tetratricopeptide repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:543_Mixed,_incl._ATPase-coupled_lipid_transmembrane_transporter_activity,_and_Tetratricopeptide_repeats


id: CL:5436
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5436_Mostly_uncharacterized,_incl._Adaptive_response_protein_AidB,_N-terminal,_and_DNA-binding_HTH_domain,_TetR-type

description:
  Mostly uncharacterized, incl. Adaptive response protein AidB, N-terminal, and DNA-binding HTH domain, TetR-type


id: CL:5437
description: Mixed, incl. Adaptive response protein AidB, N-terminal, and DNA-binding HTH domain, TetR-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5437_Mixed,_incl._Adaptive_response_protein_AidB,_N-terminal,_and_DNA-binding_HTH_domain,_TetR-type


id: CL:5438
description: Mixed, incl. Adaptive response protein AidB, N-terminal, and Transposase, IS4-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5438_Mixed,_incl._Adaptive_response_protein_AidB,_N-terminal,_and_Transposase,_IS4-like


id: CL:544
description: Mixed, incl. Purine nucleotide salvage, and Tetratricopeptide repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:544_Mixed,_incl._Purine_nucleotide_salvage,_and_Tetratricopeptide_repeats


id: CL:5453
description: Mixed, incl. Adaptive response protein AidB, N-terminal, and Uncharacterised ArCR, COG2043
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5453_Mixed,_incl._Adaptive_response_protein_AidB,_N-terminal,_and_Uncharacterised_ArCR,_COG2043


id: CL:5466
description: Mixed, incl. WYL domain, and Protein of unknown function DUF4442
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5466_Mixed,_incl._WYL_domain,_and_Protein_of_unknown_function_DUF4442


id: CL:547
description: Mixed, incl. Threonyl/alanyl tRNA synthetase, SAD, and Methionine biosynthesis protein MetW
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:547_Mixed,_incl._Threonyl/alanyl_tRNA_synthetase,_SAD,_and_Methionine_biosynthesis_protein_MetW


id: CL:5477
description: Mixed, incl. Transcription regulator AsnC/Lrp, ligand binding domain, and EamA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5477_Mixed,_incl._Transcription_regulator_AsnC/Lrp,_ligand_binding_domain,_and_EamA_domain


id: CL:5479
description: Mixed, incl. Transcription regulator AsnC/Lrp, ligand binding domain, and EamA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5479_Mixed,_incl._Transcription_regulator_AsnC/Lrp,_ligand_binding_domain,_and_EamA_domain


id: CL:5480
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5480_Mixed,_incl._Transcription_regulator_AsnC/Lrp,_ligand_binding_domain,_and_Sugar_transporter,_conserved_site

description:
  Mixed, incl. Transcription regulator AsnC/Lrp, ligand binding domain, and Sugar transporter, conserved site


id: CL:5483
description: Mixed, incl. ParB/Sulfiredoxin domain, and Sugar transporter, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5483_Mixed,_incl._ParB/Sulfiredoxin_domain,_and_Sugar_transporter,_conserved_site


id: CL:5500
description: Mixed, incl. Neutral amino acid transport, and Sigma-70 region 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5500_Mixed,_incl._Neutral_amino_acid_transport,_and_Sigma-70_region_2


id: CL:5526
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5526_Mixed,_incl._Organic_phosphonate_metabolic_process,_and_Inorganic_phosphate_transmembrane_transporter_activity

description:
  Mixed, incl. Organic phosphonate metabolic process, and Inorganic phosphate transmembrane transporter activity


id: CL:5527
description: Mixed, incl. Organic phosphonate metabolic process, and Organic phosphonate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5527_Mixed,_incl._Organic_phosphonate_metabolic_process,_and_Organic_phosphonate_transport


id: CL:5528
description: Organic phosphonate metabolic process, and Organic phosphonate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5528_Organic_phosphonate_metabolic_process,_and_Organic_phosphonate_transport


id: CL:5531
description: Organic phosphonate metabolic process, and ABC-type phosphonate transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5531_Organic_phosphonate_metabolic_process,_and_ABC-type_phosphonate_transporter_activity


id: CL:5534
description: Organic phosphonate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5534_Organic_phosphonate_metabolic_process


id: CL:5559
description: Alkaline-phosphatase-like, core domain superfamily, and 3-5-exoribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5559_Alkaline-phosphatase-like,_core_domain_superfamily,_and_3-5-exoribonuclease_activity


id: CL:5575
description: Inorganic phosphate transmembrane transporter activity, and Phosphate ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5575_Inorganic_phosphate_transmembrane_transporter_activity,_and_Phosphate_ion_binding


id: CL:5577
description: Phosphate ion transport, and Inorganic phosphate transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5577_Phosphate_ion_transport,_and_Inorganic_phosphate_transmembrane_transporter_activity


id: CL:5598
description: Mixed, incl. Iron ion homeostasis, and Ferric-uptake regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5598_Mixed,_incl._Iron_ion_homeostasis,_and_Ferric-uptake_regulator


id: CL:5599
description: Mixed, incl. Ferric-uptake regulator, and Rubredoxin-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5599_Mixed,_incl._Ferric-uptake_regulator,_and_Rubredoxin-like_domain


id: CL:5600
description: Mixed, incl. Ferric-uptake regulator, and Peroxidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5600_Mixed,_incl._Ferric-uptake_regulator,_and_Peroxidase_activity


id: CL:5601
description: Mixed, incl. FecCD transport family, and Ferric-uptake regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5601_Mixed,_incl._FecCD_transport_family,_and_Ferric-uptake_regulator


id: CL:5617
description: Peroxidase activity, and DJ-1/PfpI
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5617_Peroxidase_activity,_and_DJ-1/PfpI


id: CL:5633
description: Mixed, incl. Rubredoxin-oxygen oxidoreductase, and Rubredoxin-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5633_Mixed,_incl._Rubredoxin-oxygen_oxidoreductase,_and_Rubredoxin-like_domain


id: CL:564
description: Purine nucleotide salvage, and Calcium
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:564_Purine_nucleotide_salvage,_and_Calcium


id: CL:5652
description: Mixed, incl. Ferrous iron transporter FeoA domain, and Iron transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5652_Mixed,_incl._Ferrous_iron_transporter_FeoA_domain,_and_Iron_transport


id: CL:5655
description: Mixed, incl. Iron transport, and Ferrous iron transporter FeoA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5655_Mixed,_incl._Iron_transport,_and_Ferrous_iron_transporter_FeoA_domain


id: CL:5678
description: Mixed, incl. Methylthiotransferase, and Cyclic nucleotide-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5678_Mixed,_incl._Methylthiotransferase,_and_Cyclic_nucleotide-binding_domain_superfamily


id: CL:5691
description: Mixed, incl. Degradation of aromatic compounds, and Protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5691_Mixed,_incl._Degradation_of_aromatic_compounds,_and_Protein_catabolic_process


id: CL:5692
description: Mixed, incl. Degradation of aromatic compounds, and Organic radical-activating enzymes
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5692_Mixed,_incl._Degradation_of_aromatic_compounds,_and_Organic_radical-activating_enzymes


id: CL:5693
description: Mixed, incl. Selenium, and CoA enzyme activase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5693_Mixed,_incl._Selenium,_and_CoA_enzyme_activase


id: CL:5695
description: Mixed, incl. Selenium, and CoA enzyme activase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5695_Mixed,_incl._Selenium,_and_CoA_enzyme_activase


id: CL:5710
description: Mixed, incl. AmmeMemoRadiSam system radical SAM enzyme, and Ubiquinone biosynthesis complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5710_Mixed,_incl._AmmeMemoRadiSam_system_radical_SAM_enzyme,_and_Ubiquinone_biosynthesis_complex


id: CL:5725
description: Mixed, incl. MEMO1 family, and Organic radical-activating enzymes
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5725_Mixed,_incl._MEMO1_family,_and_Organic_radical-activating_enzymes


id: CL:5728
description: AMMECR1 domain, and Organic radical-activating enzymes
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5728_AMMECR1_domain,_and_Organic_radical-activating_enzymes


id: CL:573
description: ATPase-coupled lipid transmembrane transporter activity, and Carbohydrate kinase, FGGY
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:573_ATPase-coupled_lipid_transmembrane_transporter_activity,_and_Carbohydrate_kinase,_FGGY


id: CL:5749
description: Mixed, incl. Protein self-association, and Protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5749_Mixed,_incl._Protein_self-association,_and_Protein_catabolic_process


id: CL:5750
description: Mixed, incl. Protein self-association, and Protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5750_Mixed,_incl._Protein_self-association,_and_Protein_catabolic_process


id: CL:5752
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5752_Mixed,_incl._Clp,_repeat_(R)_domain,_and_Ribosomal_protein_L7/L12,_C-terminal/adaptor_protein_ClpS-like

description:
  Mixed, incl. Clp, repeat (R) domain, and Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like


id: CL:5773
description: Mixed, incl. Lon protease (S16) C-terminal proteolytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5773_Mixed,_incl._Lon_protease_(S16)_C-terminal_proteolytic_domain


id: CL:5782
description: Mixed, incl. Bacterial microcompartment, and NqrDE/RnfAE
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5782_Mixed,_incl._Bacterial_microcompartment,_and_NqrDE/RnfAE


id: CL:5784
description: Mixed, incl. NqrDE/RnfAE, and FMN-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5784_Mixed,_incl._NqrDE/RnfAE,_and_FMN-binding


id: CL:5812
description: Bacterial microcompartment, and Ethanolamine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5812_Bacterial_microcompartment,_and_Ethanolamine_catabolic_process


id: CL:5816
description: Ethanolamine catabolic process, and CcmK-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5816_Ethanolamine_catabolic_process,_and_CcmK-like_superfamily


id: CL:5837
description: Mixed, incl. AhpD-like, and Flavoprotein-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5837_Mixed,_incl._AhpD-like,_and_Flavoprotein-like_superfamily


id: CL:5838
description: Mixed, incl. AhpD-like, and Flavoprotein-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5838_Mixed,_incl._AhpD-like,_and_Flavoprotein-like_superfamily


id: CL:5839
description: Mostly uncharacterized, incl. AhpD-like, and Flavoprotein-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5839_Mostly_uncharacterized,_incl._AhpD-like,_and_Flavoprotein-like_superfamily


id: CL:5840
description: Mixed, incl. AhpD-like, and Flavoprotein-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5840_Mixed,_incl._AhpD-like,_and_Flavoprotein-like_superfamily


id: CL:5842
description: Mixed, incl. Sulfate transport, and Flavodoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5842_Mixed,_incl._Sulfate_transport,_and_Flavodoxin_domain


id: CL:5858
description: Mixed, incl. AhpD-like, and (S)-2-haloacid dehalogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5858_Mixed,_incl._AhpD-like,_and_(S)-2-haloacid_dehalogenase_activity


id: CL:5871
description: Mixed, incl. NAD kinase, and Tubulin/FtsZ-like, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5871_Mixed,_incl._NAD_kinase,_and_Tubulin/FtsZ-like,_C-terminal_domain


id: CL:5880
description: Mixed, incl. Carboxymuconolactone decarboxylase-like, and Protein of unknown function DUF1285
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5880_Mixed,_incl._Carboxymuconolactone_decarboxylase-like,_and_Protein_of_unknown_function_DUF1285


id: CL:5896
description: Mixed, incl. Pfam phage integrase family, and DNA geometric change
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5896_Mixed,_incl._Pfam_phage_integrase_family,_and_DNA_geometric_change


id: CL:590
description: Mixed, incl. Transcription, DNA-templated, and ATP-dependent chromatin remodeler activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:590_Mixed,_incl._Transcription,_DNA-templated,_and_ATP-dependent_chromatin_remodeler_activity


id: CL:5907
description: Mixed, incl. MetI-like superfamily, and ABC transporter-like, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5907_Mixed,_incl._MetI-like_superfamily,_and_ABC_transporter-like,_conserved_site


id: CL:5910
description: Mixed, incl. MetI-like superfamily, and Solute-binding protein family 3/N-terminal domain of MltF
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5910_Mixed,_incl._MetI-like_superfamily,_and_Solute-binding_protein_family_3/N-terminal_domain_of_MltF


id: CL:5912
description: Amino acid ABC transporter, permease protein, 3-TM domain, and Ligand-gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5912_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Ligand-gated_channel_activity


id: CL:5914
description: Amino acid ABC transporter, permease protein, 3-TM domain, and Ligand-gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5914_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Ligand-gated_channel_activity


id: CL:5916
description: Ligand-gated channel activity, and Amino acid ABC transporter, permease protein, 3-TM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5916_Ligand-gated_channel_activity,_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain


id: CL:593
description: RNA polymerase, and ATP-dependent chromatin remodeler activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:593_RNA_polymerase,_and_ATP-dependent_chromatin_remodeler_activity


id: CL:5960
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5960_Mixed,_incl._Molybdate/tungstate_binding,_C-terminal,_and_ABC-type_carbohydrate_transporter_activity

description:
  Mixed, incl. Molybdate/tungstate binding, C-terminal, and ABC-type carbohydrate transporter activity


id: CL:5962
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5962_Mixed,_incl._Molybdate/tungstate_binding,_C-terminal,_and_ABC-type_carbohydrate_transporter_activity

description:
  Mixed, incl. Molybdate/tungstate binding, C-terminal, and ABC-type carbohydrate transporter activity


id: CL:5963
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5963_Mixed,_incl._Bacterial_extracellular_solute-binding_protein,_and_glycerol-3-phosphate_transmembrane_transporter_activity

description:
  Mixed, incl. Bacterial extracellular solute-binding protein, and glycerol-3-phosphate transmembrane transporter activity


id: CL:5979
description: ABC transporter, ferric cation import, FbpC, and ABC-type carbohydrate transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5979_ABC_transporter,_ferric_cation_import,_FbpC,_and_ABC-type_carbohydrate_transporter_activity


id: CL:5991
description: SsuA/THI5-like, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:5991_SsuA/THI5-like,_and_Nitrogen_metabolism


id: CL:6004
description: Mixed, incl. Periplasmic binding protein, and Iron ion homeostasis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6004_Mixed,_incl._Periplasmic_binding_protein,_and_Iron_ion_homeostasis


id: CL:6005
description: Mixed, incl. Periplasmic binding protein, and ABC transporter, permease protein, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6005_Mixed,_incl._Periplasmic_binding_protein,_and_ABC_transporter,_permease_protein,_BtuC-like


id: CL:6007
description: Periplasmic binding protein, and FecCD transport family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6007_Periplasmic_binding_protein,_and_FecCD_transport_family


id: CL:6030
description: Mixed, incl. Polyamine transport, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6030_Mixed,_incl._Polyamine_transport,_and_Bacterial_extracellular_solute-binding_protein


id: CL:6048
description: Glycine betaine transport, and Carnitine transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6048_Glycine_betaine_transport,_and_Carnitine_transmembrane_transporter_activity


id: CL:6063
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6063_Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
  Latent infection - Other responses of Mtb to phagocytosis, and Oligopeptide/dipeptide ABC transporter, C-terminal


id: CL:6065
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6065_Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
  Latent infection - Other responses of Mtb to phagocytosis, and Oligopeptide/dipeptide ABC transporter, C-terminal


id: CL:6066
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6066_Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
  Latent infection - Other responses of Mtb to phagocytosis, and Oligopeptide/dipeptide ABC transporter, C-terminal


id: CL:6068
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6068_Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
[cell repeats an earlier one in this file: 113 characters]


id: CL:6069
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6069_Mixed,_incl._Oligopeptide/dipeptide_ABC_transporter,_C-terminal,_and_Solute-binding_protein_family_5

description:
  Mixed, incl. Oligopeptide/dipeptide ABC transporter, C-terminal, and Solute-binding protein family 5


id: CL:6071
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6071_Mixed,_incl._Oligopeptide_transport_permease_C-like,_N-terminal_domain,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
  Mixed, incl. Oligopeptide transport permease C-like, N-terminal domain, and Oligopeptide/dipeptide ABC transporter, C-terminal


id: CL:6073
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6073_Oligopeptide/dipeptide_transporter,_C-terminal_region,_and_Oligopeptide_transport_permease_C-like,_N-terminal_domain

description:
  Oligopeptide/dipeptide transporter, C-terminal region, and Oligopeptide transport permease C-like, N-terminal domain


id: CL:6087
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6087_Oligopeptide/dipeptide_ABC_transporter,_C-terminal,_and_Oligopeptide_transport_permease_C-like,_N-terminal_domain

description:
  Oligopeptide/dipeptide ABC transporter, C-terminal, and Oligopeptide transport permease C-like, N-terminal domain


id: CL:6103
description: Oligopeptide/dipeptide transporter, C-terminal region, and Solute-binding protein family 5
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6103_Oligopeptide/dipeptide_transporter,_C-terminal_region,_and_Solute-binding_protein_family_5


id: CL:6112
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6112_Mixed,_incl._Twin-arginine_translocation_pathway,_signal_sequence,_bacterial/archaeal,_and_N-terminal_TM_domain_of_oligopeptide_transport_permease_C

description:
  Mixed, incl. Twin-arginine translocation pathway, signal sequence, bacterial/archaeal, and N-terminal TM domain of oligopeptide transport permease C


id: CL:6128
description: Mixed, incl. D-aminopeptidase, and Oligopeptide/dipeptide ABC transporter, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6128_Mixed,_incl._D-aminopeptidase,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal


id: CL:6140
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6140_Oligopeptide/dipeptide_transporter,_C-terminal_region,_and_Oligopeptide_transport_permease_C-like,_N-terminal_domain

description:
  Oligopeptide/dipeptide transporter, C-terminal region, and Oligopeptide transport permease C-like, N-terminal domain


id: CL:6151
description: Mixed, incl. Inverse autotransporter, beta-domain, and Radical SAM, C-terminal extension
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6151_Mixed,_incl._Inverse_autotransporter,_beta-domain,_and_Radical_SAM,_C-terminal_extension


id: CL:6155
description: Mixed, incl. Class I glutamine amidotransferase-like, and ABC transporter-like, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6155_Mixed,_incl._Class_I_glutamine_amidotransferase-like,_and_ABC_transporter-like,_ATP-binding_domain


id: CL:6176
description: Mixed, incl. Tetrapyrrole biosynthetic process, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6176_Mixed,_incl._Tetrapyrrole_biosynthetic_process,_and_Cobalt_transport_protein


id: CL:6177
description: Mixed, incl. Tetrapyrrole biosynthetic process, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6177_Mixed,_incl._Tetrapyrrole_biosynthetic_process,_and_Cobalt_transport_protein


id: CL:6178
description: Tetrapyrrole biosynthetic process, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6178_Tetrapyrrole_biosynthetic_process,_and_Cobalt_transport_protein


id: CL:6179
description: Tetrapyrrole biosynthetic process, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6179_Tetrapyrrole_biosynthetic_process,_and_Cobalt_transport_protein


id: CL:6180
description: Tetrapyrrole biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6180_Tetrapyrrole_biosynthetic_process


id: CL:6185
description: Tetrapyrrole methylase, and Cobalamin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6185_Tetrapyrrole_methylase,_and_Cobalamin_metabolic_process


id: CL:619
description: 6-O-methylguanine DNA methyltransferase, DNA binding domain, and Sigma-70 factor, region 1.2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:619_6-O-methylguanine_DNA_methyltransferase,_DNA_binding_domain,_and_Sigma-70_factor,_region_1.2


id: CL:6225
description: Mixed, incl. Cobalt transport protein, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6225_Mixed,_incl._Cobalt_transport_protein,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:6226
description: Mixed, incl. Monocarboxylic acid transport, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6226_Mixed,_incl._Monocarboxylic_acid_transport,_and_Cobalt_transport_protein


id: CL:6238
description: Mixed, incl. Enzyme inhibitor activity, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6238_Mixed,_incl._Enzyme_inhibitor_activity,_and_Cobalt_transport_protein


id: CL:6248
description: Mixed, incl. Phosphate transporter, and Protein of unknown function DUF47
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6248_Mixed,_incl._Phosphate_transporter,_and_Protein_of_unknown_function_DUF47


id: CL:6263
description: Mixed, incl. Coenzyme PQQ synthesis protein E-like, and Zinc-ribbon domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6263_Mixed,_incl._Coenzyme_PQQ_synthesis_protein_E-like,_and_Zinc-ribbon_domain


id: CL:6274
description: Mixed, incl. Magnesium chelatase activity, and Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6274_Mixed,_incl._Magnesium_chelatase_activity,_and_Chromosome_segregation


id: CL:6275
description: Mixed, incl. Magnesium chelatase activity, and Glycine zipper
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6275_Mixed,_incl._Magnesium_chelatase_activity,_and_Glycine_zipper


id: CL:6277
description: Mixed, incl. Glycine zipper, and C-type lectin fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6277_Mixed,_incl._Glycine_zipper,_and_C-type_lectin_fold


id: CL:6296
description: Mixed, incl. NUBPL iron-transfer P-loop NTPase, and ParB/Sulfiredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6296_Mixed,_incl._NUBPL_iron-transfer_P-loop_NTPase,_and_ParB/Sulfiredoxin


id: CL:6307
description: Mostly uncharacterized, incl. Bacteriophage T4, Gp19, tail tube, and Protein MJ0674-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6307_Mostly_uncharacterized,_incl._Bacteriophage_T4,_Gp19,_tail_tube,_and_Protein_MJ0674-like


id: CL:6308
description: Mostly uncharacterized, incl. Bacteriophage T4, Gp19, tail tube, and Organelle lumen
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6308_Mostly_uncharacterized,_incl._Bacteriophage_T4,_Gp19,_tail_tube,_and_Organelle_lumen


id: CL:6311
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6311_Mostly_uncharacterized,_incl._Bacteriophage_T4,_Gp19,_tail_tube,_and_Type_II_protein_secretion_system_complex

description:
  Mostly uncharacterized, incl. Bacteriophage T4, Gp19, tail tube, and Type II protein secretion system complex


id: CL:6314
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6314_Mostly_uncharacterized,_incl._Bacteriophage_T4,_Gp19,_tail_tube,_and_Type_II_protein_secretion_system_complex

description:
  Mostly uncharacterized, incl. Bacteriophage T4, Gp19, tail tube, and Type II protein secretion system complex


id: CL:6317
description: Mixed, incl. Bacteriophage T4, Gp19, tail tube, and Type II protein secretion system complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6317_Mixed,_incl._Bacteriophage_T4,_Gp19,_tail_tube,_and_Type_II_protein_secretion_system_complex


id: CL:6320
description: Mixed, incl. Bacteriophage T4, Gp19, tail tube, and Bacterial secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6320_Mixed,_incl._Bacteriophage_T4,_Gp19,_tail_tube,_and_Bacterial_secretion_system


id: CL:6362
description: Mixed, incl. Organelle lumen, and tRNA-guanine transglycosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6362_Mixed,_incl._Organelle_lumen,_and_tRNA-guanine_transglycosylation


id: CL:6373
description: Mostly uncharacterized, incl. Uridylyltransferase activity, and HNH nuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6373_Mostly_uncharacterized,_incl._Uridylyltransferase_activity,_and_HNH_nuclease


id: CL:6374
description: Mostly uncharacterized, incl. HNH nuclease, and Sugar transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6374_Mostly_uncharacterized,_incl._HNH_nuclease,_and_Sugar_transport


id: CL:6376
description: Mixed, incl. Sugar transport, and Putative regulatory protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6376_Mixed,_incl._Sugar_transport,_and_Putative_regulatory_protein


id: CL:639
description: Mixed, incl. Peptidase S1C, and Metalloenzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:639_Mixed,_incl._Peptidase_S1C,_and_Metalloenzyme


id: CL:6390
description: Mixed, incl. HNH nuclease, and Peptidase S1C, Do
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6390_Mixed,_incl._HNH_nuclease,_and_Peptidase_S1C,_Do


id: CL:6399
description: Mixed, incl. UDP-N-acetylglucosamine metabolic process, and Protein MJ0674-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6399_Mixed,_incl._UDP-N-acetylglucosamine_metabolic_process,_and_Protein_MJ0674-like


id: CL:6408
description: Mixed, incl. Sub-family of tyrosine recombinases, and SinI-like, DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6408_Mixed,_incl._Sub-family_of_tyrosine_recombinases,_and_SinI-like,_DNA-binding_domain


id: CL:6410
description: Mixed, incl. Sub-family of tyrosine recombinases, and Redoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6410_Mixed,_incl._Sub-family_of_tyrosine_recombinases,_and_Redoxin


id: CL:6429
description: Mixed, incl. CoA-transferase family III, and Cobalamin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6429_Mixed,_incl._CoA-transferase_family_III,_and_Cobalamin_binding


id: CL:6430
description: Mixed, incl. CoA-transferase family III, and Cobalamin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6430_Mixed,_incl._CoA-transferase_family_III,_and_Cobalamin_binding


id: CL:6431
description: Mixed, incl. CoA-transferase family III, and Methylmalonyl-CoA mutase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6431_Mixed,_incl._CoA-transferase_family_III,_and_Methylmalonyl-CoA_mutase,_C-terminal


id: CL:6433
description: Mixed, incl. Methylmalonyl-CoA mutase, C-terminal, and CoA-transferase family III
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6433_Mixed,_incl._Methylmalonyl-CoA_mutase,_C-terminal,_and_CoA-transferase_family_III


id: CL:6436
description: Mixed, incl. Methylmalonyl-CoA mutase, and SIMIBI class G3E GTPase, ArgK/MeaB
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6436_Mixed,_incl._Methylmalonyl-CoA_mutase,_and_SIMIBI_class_G3E_GTPase,_ArgK/MeaB


id: CL:6472
description: Mixed, incl. CoA-transferase family III domain 3 superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6472_Mixed,_incl._CoA-transferase_family_III_domain_3_superfamily


id: CL:6483
description: Mixed, incl. Sodium/solute symporter, and CoA-transferase family III domain 3 superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6483_Mixed,_incl._Sodium/solute_symporter,_and_CoA-transferase_family_III_domain_3_superfamily


id: CL:6494
description: Mixed, incl. Regulation of protein transport, and Toxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6494_Mixed,_incl._Regulation_of_protein_transport,_and_Toxin


id: CL:6497
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6497_Mixed,_incl._Regulation_of_protein_transport,_and_Glycoside_hydrolase/deacetylase,_beta/alpha-barrel

description:
  Mixed, incl. Regulation of protein transport, and Glycoside hydrolase/deacetylase, beta/alpha-barrel


id: CL:6516
description: Lactone catabolic process, and MrfA-like Zn-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6516_Lactone_catabolic_process,_and_MrfA-like_Zn-binding_domain


id: CL:6534
description: Amino acid transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6534_Amino_acid_transport,_and_ABC_transporter,_permease


id: CL:6535
description: Amino acid transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6535_Amino_acid_transport,_and_ABC_transporter,_permease


id: CL:6536
description: Amino acid transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6536_Amino_acid_transport,_and_ABC_transporter,_permease


id: CL:6539
description: Branched-chain amino acid transport, and Leucine binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6539_Branched-chain_amino_acid_transport,_and_Leucine_binding


id: CL:6540
description: Branched-chain amino acid transport, and Leucine binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6540_Branched-chain_amino_acid_transport,_and_Leucine_binding


id: CL:6541
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6541_Mixed,_incl._High-affinity_branched-chain_amino_acid_transport_ATP-binding_protein,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter

description:
  Mixed, incl. High-affinity branched-chain amino acid transport ATP-binding protein, and Branched-chain amino acid ATP-binding cassette transporter


id: CL:6542
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6542_Mixed,_incl._High-affinity_branched-chain_amino_acid_transport_ATP-binding_protein,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter

description:
  Mixed, incl. High-affinity branched-chain amino acid transport ATP-binding protein, and Branched-chain amino acid ATP-binding cassette transporter


id: CL:6551
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6551_Mixed,_incl._High-affinity_branched-chain_amino_acid_transport_ATP-binding_protein,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter

description:
  Mixed, incl. High-affinity branched-chain amino acid transport ATP-binding protein, and Branched-chain amino acid ATP-binding cassette transporter


id: CL:656
description: DNA replication, and DNA repair complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:656_DNA_replication,_and_DNA_repair_complex


id: CL:6560
description: Leu/Ile/Val-binding protein, and Branched-chain amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6560_Leu/Ile/Val-binding_protein,_and_Branched-chain_amino_acid_transport


id: CL:6569
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6569_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_and_Branched-chain_amino_acid_transmembrane_transporter_activity

description:
  Branched-chain amino acid ATP-binding cassette transporter, and Branched-chain amino acid transmembrane transporter activity


id: CL:657
description: Nucleotide excision repair, and DNA-templated DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:657_Nucleotide_excision_repair,_and_DNA-templated_DNA_replication


id: CL:6579
description: Leu/Ile/Val-binding protein, and Branched-chain amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6579_Leu/Ile/Val-binding_protein,_and_Branched-chain_amino_acid_transport


id: CL:658
description: Nucleotide excision repair, and Damaged DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:658_Nucleotide_excision_repair,_and_Damaged_DNA_binding


id: CL:6589
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6589_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_and_Branched-chain_amino_acid_transmembrane_transporter_activity

description:
  Branched-chain amino acid ATP-binding cassette transporter, and Branched-chain amino acid transmembrane transporter activity


id: CL:6599
description: Branched-chain amino acid transmembrane transporter activity, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6599_Branched-chain_amino_acid_transmembrane_transporter_activity,_and_Leucine-binding_protein_domain


id: CL:6600
description: Leucine-binding protein domain, and Branched-chain amino acid ATP-binding cassette transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6600_Leucine-binding_protein_domain,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter


id: CL:6609
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6609_Mixed,_incl._High-affinity_branched-chain_amino_acid_transport_ATP-binding_protein,_and_Leu/Ile/Val-binding_protein

description:
  Mixed, incl. High-affinity branched-chain amino acid transport ATP-binding protein, and Leu/Ile/Val-binding protein


id: CL:661
description: Mixed, incl. Mismatched DNA binding, and UvrD-like helicase C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:661_Mixed,_incl._Mismatched_DNA_binding,_and_UvrD-like_helicase_C-terminal_domain


id: CL:6619
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6619_Branched-chain_amino_acid_transport,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal

description:
  Branched-chain amino acid transport, and Branched-chain amino acid ATP-binding cassette transporter, C-terminal


id: CL:6620
description: Branched-chain amino acid transmembrane transporter activity, and Leu/Ile/Val-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6620_Branched-chain_amino_acid_transmembrane_transporter_activity,_and_Leu/Ile/Val-binding_protein


id: CL:6621
description: Branched-chain amino acid transmembrane transporter activity, and Leu/Ile/Val-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6621_Branched-chain_amino_acid_transmembrane_transporter_activity,_and_Leu/Ile/Val-binding_protein


id: CL:663
description: Mixed, incl. HRDC domain, and UvrD/REP helicase N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:663_Mixed,_incl._HRDC_domain,_and_UvrD/REP_helicase_N-terminal_domain


id: CL:6630
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6630_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_and_Branched-chain_amino_acid_transmembrane_transporter_activity

description:
  Branched-chain amino acid ATP-binding cassette transporter, and Branched-chain amino acid transmembrane transporter activity


id: CL:6639
description: Branched-chain amino acid transport, and Leucine binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6639_Branched-chain_amino_acid_transport,_and_Leucine_binding


id: CL:6649
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6649_Mixed,_incl._High-affinity_branched-chain_amino_acid_transport_ATP-binding_protein,_and_Leu/Ile/Val-binding_protein

description:
  Mixed, incl. High-affinity branched-chain amino acid transport ATP-binding protein, and Leu/Ile/Val-binding protein


id: CL:6665
description: Mixed, incl. YjbQ-like superfamily, and Regulation of signaling
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6665_Mixed,_incl._YjbQ-like_superfamily,_and_Regulation_of_signaling


id: CL:6676
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6676_Mixed,_incl._TRAP_C4-dicarboxylate_transport_system_permease_DctM_subunit,_and_C4-dicarboxylate_transport

description:
  Mixed, incl. TRAP C4-dicarboxylate transport system permease DctM subunit, and C4-dicarboxylate transport


id: CL:6677
description: Mixed, incl. C4-dicarboxylate transport, and TRAP transporter solute receptor DctP
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6677_Mixed,_incl._C4-dicarboxylate_transport,_and_TRAP_transporter_solute_receptor_DctP


id: CL:6678
description: C4-dicarboxylate transport, and TRAP transporter solute receptor DctP
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6678_C4-dicarboxylate_transport,_and_TRAP_transporter_solute_receptor_DctP


id: CL:6680
description: TRAP transporter solute receptor, DctP family, and C4-dicarboxylate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6680_TRAP_transporter_solute_receptor,_DctP_family,_and_C4-dicarboxylate_transport


id: CL:6682
description: TRAP transporter solute receptor, DctP family, and C4-dicarboxylate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6682_TRAP_transporter_solute_receptor,_DctP_family,_and_C4-dicarboxylate_transport


id: CL:6698
description: TRAP transporter solute receptor, DctP family, and C4-dicarboxylate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6698_TRAP_transporter_solute_receptor,_DctP_family,_and_C4-dicarboxylate_transport


id: CL:6715
description: Solute binding protein, TakP-like, and C4-dicarboxylate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6715_Solute_binding_protein,_TakP-like,_and_C4-dicarboxylate_transport


id: CL:6731
description: Mixed, incl. GntR, C-terminal, and D-glutamate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6731_Mixed,_incl._GntR,_C-terminal,_and_D-glutamate_cyclase


id: CL:6732
description: Mixed, incl. D-glutamate cyclase, and Protein of unknown function DUF2848
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6732_Mixed,_incl._D-glutamate_cyclase,_and_Protein_of_unknown_function_DUF2848


id: CL:6734
description: Mixed, incl. D-glutamate cyclase, and Protein of unknown function DUF2848
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6734_Mixed,_incl._D-glutamate_cyclase,_and_Protein_of_unknown_function_DUF2848


id: CL:6752
description: Cyclophilin-like domain superfamily, and D-glutamate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6752_Cyclophilin-like_domain_superfamily,_and_D-glutamate_cyclase


id: CL:6762
description: GntR, C-terminal, and Bacterial transcriptional regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6762_GntR,_C-terminal,_and_Bacterial_transcriptional_regulator


id: CL:6775
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6775_TRAP_transporter_solute_receptor,_TAXI_family,_and_TRAP_C4-dicarboxylate_transport_system_permease,_fused_DctM-DctQ

description:
  TRAP transporter solute receptor, TAXI family, and TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ


id: CL:6777
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6777_TRAP_transporter_solute_receptor,_TAXI_family,_and_TRAP_C4-dicarboxylate_transport_system_permease,_fused_DctM-DctQ

description:
  TRAP transporter solute receptor, TAXI family, and TRAP C4-dicarboxylate transport system permease, fused DctM-DctQ


id: CL:6797
description: Mixed, incl. Transposition, and Toxin-antitoxin complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6797_Mixed,_incl._Transposition,_and_Toxin-antitoxin_complex


id: CL:6798
description: Mixed, incl. Transposition, and Toxin-antitoxin complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6798_Mixed,_incl._Transposition,_and_Toxin-antitoxin_complex


id: CL:6799
description: Mixed, incl. Toxin-antitoxin complex, and Nucleotidyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6799_Mixed,_incl._Toxin-antitoxin_complex,_and_Nucleotidyltransferase_domain


id: CL:6801
description: Mixed, incl. Toxin-antitoxin complex, and Nucleotidyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6801_Mixed,_incl._Toxin-antitoxin_complex,_and_Nucleotidyltransferase_domain


id: CL:6803
description: Nucleotidyltransferase domain, and Ribonuclease HepT-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6803_Nucleotidyltransferase_domain,_and_Ribonuclease_HepT-like


id: CL:6805
description: Nucleotidyltransferase domain, and tRNA nuclease HepT-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6805_Nucleotidyltransferase_domain,_and_tRNA_nuclease_HepT-like_superfamily


id: CL:6808
description: tRNA nuclease HepT-like superfamily, and Polymerase beta, nucleotidyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6808_tRNA_nuclease_HepT-like_superfamily,_and_Polymerase_beta,_nucleotidyltransferase


id: CL:6847
description: Mixed, incl. Toxin-antitoxin complex, and YefM-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6847_Mixed,_incl._Toxin-antitoxin_complex,_and_YefM-like_superfamily


id: CL:6848
description: Toxin-antitoxin complex, and YefM-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6848_Toxin-antitoxin_complex,_and_YefM-like_superfamily


id: CL:6850
description: TTHA1013/TTHA0281-like, and HicA superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6850_TTHA1013/TTHA0281-like,_and_HicA_superfamily


id: CL:6873
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6873_Mixed,_incl._Toxin-antitoxin_system,_RelE/ParE_toxin_family,_and_Helix-turn-helix_XRE-family_like_proteins

description:
  Mixed, incl. Toxin-antitoxin system, RelE/ParE toxin family, and Helix-turn-helix XRE-family like proteins


id: CL:6884
description: Mixed, incl. DNA alkylation, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6884_Mixed,_incl._DNA_alkylation,_and_DNA_replication


id: CL:6885
description: Mixed, incl. DNA alkylation, and PIN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6885_Mixed,_incl._DNA_alkylation,_and_PIN_domain


id: CL:6890
description: DNA methylation on adenine, and Ribosomal large subunit binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6890_DNA_methylation_on_adenine,_and_Ribosomal_large_subunit_binding


id: CL:6903
description: Mixed, incl. DNA methylation on cytosine, and PIN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6903_Mixed,_incl._DNA_methylation_on_cytosine,_and_PIN_domain


id: CL:6914
description: Mostly uncharacterized, incl. Positive regulation of RNA biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6914_Mostly_uncharacterized,_incl._Positive_regulation_of_RNA_biosynthetic_process


id: CL:6932
description: Mixed, incl. Transposition, and Viral process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6932_Mixed,_incl._Transposition,_and_Viral_process


id: CL:6933
description: Mixed, incl. Transposition, and Integrase, catalytic core
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6933_Mixed,_incl._Transposition,_and_Integrase,_catalytic_core


id: CL:6935
description: Mixed, incl. Transposase activity, and Membrane transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6935_Mixed,_incl._Transposase_activity,_and_Membrane_transport_protein


id: CL:6937
description: Transposase activity, and Heavy-metal resistance protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6937_Transposase_activity,_and_Heavy-metal_resistance_protein


id: CL:6939
description: Transposase activity, and Heavy-metal resistance protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6939_Transposase_activity,_and_Heavy-metal_resistance_protein


id: CL:6988
description: Mixed, incl. Transposase IS200 like, and GIY-YIG endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:6988_Mixed,_incl._Transposase_IS200_like,_and_GIY-YIG_endonuclease


id: CL:7004
description: Mixed, incl. Integrase, catalytic core, and Helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:7004_Mixed,_incl._Integrase,_catalytic_core,_and_Helix-turn-helix_domain


id: CL:7006
description: Helix-turn-helix domain, and Integrase, catalytic core
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:7006_Helix-turn-helix_domain,_and_Integrase,_catalytic_core


id: CL:7019
description: Mixed, incl. DDE transposase sub-family, and DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:7019_Mixed,_incl._DDE_transposase_sub-family,_and_DDE_transposase_sub-family


id: CL:7036
description: Mixed, incl. Viral process, and UPF0759 superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:7036_Mixed,_incl._Viral_process,_and_UPF0759_superfamily


id: CL:7053
description: Mixed, incl. Primosome complex, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:7053_Mixed,_incl._Primosome_complex,_and_DNA_integration


id: CL:7054
description: Mixed, incl. L,D-transpeptidase catalytic domain, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:7054_Mixed,_incl._L,D-transpeptidase_catalytic_domain,_and_DNA_integration


id: CL:7055
description: Mixed, incl. DNA integration, and Adenine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:7055_Mixed,_incl._DNA_integration,_and_Adenine_catabolic_process


id: CL:7069
description: Mixed, incl. Adenine catabolic process, and Nucleotidyl transferase AbiEii toxin, Type IV TA system
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:7069_Mixed,_incl._Adenine_catabolic_process,_and_Nucleotidyl_transferase_AbiEii_toxin,_Type_IV_TA_system


id: CL:7079
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:7079_L,D-transpeptidase_catalytic_domain,_and_Hedgehog_signalling/DD-peptidase_zinc-binding_domain_superfamily

description:
  L,D-transpeptidase catalytic domain, and Hedgehog signalling/DD-peptidase zinc-binding domain superfamily


id: CL:7091
description: Primosome complex, and Homeodomain-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:7091_Primosome_complex,_and_Homeodomain-like_domain


id: CL:7112
description: Mixed, incl. Uracil-DNA glycosylase-like, and Anion-transporting ATPase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:7112_Mixed,_incl._Uracil-DNA_glycosylase-like,_and_Anion-transporting_ATPase


id: CL:7138
description: Mixed, incl. Uncharacterised ArCR, COG2043, and Elp3/MiaA/NifB-like, radical SAM core domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:7138_Mixed,_incl._Uncharacterised_ArCR,_COG2043,_and_Elp3/MiaA/NifB-like,_radical_SAM_core_domain


id: CL:7150
description: Mixed, incl. Homeodomain-like domain, and Hexapeptide repeat of succinyl-transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:7150_Mixed,_incl._Homeodomain-like_domain,_and_Hexapeptide_repeat_of_succinyl-transferase


id: CL:7161
description: Mixed, incl. Copper ion binding, and Serine aminopeptidase, S33
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:7161_Mixed,_incl._Copper_ion_binding,_and_Serine_aminopeptidase,_S33


id: CL:731
description: Mixed, incl. Holliday junction helicase complex, and RNA 2-O-methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:731_Mixed,_incl._Holliday_junction_helicase_complex,_and_RNA_2-O-methyltransferase_activity


id: CL:749
description: Exodeoxyribonuclease V complex, and RecBCD enzyme subunit RecB
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:749_Exodeoxyribonuclease_V_complex,_and_RecBCD_enzyme_subunit_RecB


id: CL:768
description: Ribonuclease E/G, and K Homology domain, type 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:768_Ribonuclease_E/G,_and_K_Homology_domain,_type_1


id: CL:782
description: Mixed, incl. Isoprenoid biosynthetic process, and tRNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:782_Mixed,_incl._Isoprenoid_biosynthetic_process,_and_tRNA_modification


id: CL:783
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:783_Mixed,_incl._Isoprenoid_biosynthetic_process,_and_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Mixed, incl. Isoprenoid biosynthetic process, and Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: CL:784
description: Isoprenoid biosynthetic process, and DNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:784_Isoprenoid_biosynthetic_process,_and_DNA_catabolic_process


id: CL:785
description: Mixed, incl. Isoprene biosynthesis, and Prenyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:785_Mixed,_incl._Isoprene_biosynthesis,_and_Prenyltransferase_activity


id: CL:787
description: Mixed, incl. Prenyltransferase activity, and De novo CTP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:787_Mixed,_incl._Prenyltransferase_activity,_and_De_novo_CTP_biosynthetic_process


id: CL:808
description: DNA catabolic process, and Polyprenyl synthetase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:808_DNA_catabolic_process,_and_Polyprenyl_synthetase


id: CL:820
description: Mixed, incl. DNA integration, and CMP kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:820_Mixed,_incl._DNA_integration,_and_CMP_kinase_activity


id: CL:835
description: Mixed, incl. Methylthiotransferase, and NusB family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:835_Mixed,_incl._Methylthiotransferase,_and_NusB_family


id: CL:837
description: Mixed, incl. NusB family, and charged-tRNA amino acid modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:837_Mixed,_incl._NusB_family,_and_charged-tRNA_amino_acid_modification


id: CL:862
description: Histone-like DNA-binding protein, and Cold shock, CspA
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:862_Histone-like_DNA-binding_protein,_and_Cold_shock,_CspA


id: CL:872
description: Mixed, incl. tRNA 3-end processing, and lysyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:872_Mixed,_incl._tRNA_3-end_processing,_and_lysyl-tRNA_aminoacylation


id: CL:883
description: Vitamin B6 metabolism, and PhoH-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:883_Vitamin_B6_metabolism,_and_PhoH-like_protein


id: CL:897
description: Mixed, incl. Cellular amino acid biosynthetic process, and Nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:897_Mixed,_incl._Cellular_amino_acid_biosynthetic_process,_and_Nucleotide_biosynthetic_process


id: CL:898
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:898_Mixed,_incl._Cellular_amino_acid_biosynthetic_process,_and_Nucleoside_monophosphate_biosynthetic_process

description:
  Mixed, incl. Cellular amino acid biosynthetic process, and Nucleoside monophosphate biosynthetic process


id: CL:899
description: Cellular amino acid biosynthetic process, and Transaminase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:899_Cellular_amino_acid_biosynthetic_process,_and_Transaminase_activity


id: CL:900
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:900_Alpha-amino_acid_biosynthetic_process,_and_Aminotransferases,_class-I,_pyridoxal-phosphate-binding_site

description:
  Alpha-amino acid biosynthetic process, and Aminotransferases, class-I, pyridoxal-phosphate-binding site


id: CL:902
description: Mixed, incl. Lysine biosynthesis, and Glutamine family amino acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:902_Mixed,_incl._Lysine_biosynthesis,_and_Glutamine_family_amino_acid_biosynthetic_process


id: CL:904
description: Lysine biosynthesis, and Arginine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:904_Lysine_biosynthesis,_and_Arginine_biosynthetic_process


id: CL:905
description: Arginine biosynthesis, and Peptidase M20
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:905_Arginine_biosynthesis,_and_Peptidase_M20


id: CL:929
description: Lysine biosynthesis, and Threonine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:929_Lysine_biosynthesis,_and_Threonine_biosynthetic_process


id: CL:954
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:954_Mixed,_incl._One-carbon_metabolic_process,_and_5-methyltetrahydropteroyltri-L-glutamate-dependent_methyltransferase_activity

description:
  Mixed, incl. One-carbon metabolic process, and 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity


id: CL:956
description: Cysteine metabolic process, and Adenosylhomocysteinase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:956_Cysteine_metabolic_process,_and_Adenosylhomocysteinase-like


id: CL:970
description: Novobiocin biosynthesis, and Aminopeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:970_Novobiocin_biosynthesis,_and_Aminopeptidase


id: CL:984
description: Mixed, incl. Alanine dehydrogenase, and D-alanine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:984_Mixed,_incl._Alanine_dehydrogenase,_and_D-alanine_metabolic_process


id: CL:997
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Histidine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:997_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Histidine_biosynthesis


id: CL:998
description: Phenylalanine, tyrosine and tryptophan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:998_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis


id: CL:999
description: Chorismate metabolic process, and NeuB family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121391_STRINGid_CL:999_Chorismate_metabolic_process,_and_NeuB_family


id: GO:0000394
description: RNA splicing, via endonucleolytic cleavage and ligation
memo: https://amigo.geneontology.org/amigo/term/GO:0000394
golevel: 9
name:
  GOBP.STRING_v12.0_1121391_STRINGid_GO:0000394_RNA_splicing,_via_endonucleolytic_cleavage_and_ligation


id: GO:0000462
description: Maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
memo: https://amigo.geneontology.org/amigo/term/GO:0000462
golevel: 11
name:
  GOBP.STRING_v12.0_1121391_STRINGid_GO:0000462_Maturation_of_SSU-rRNA_from_tricistronic_rRNA_transcript_(SSU-rRNA,_5.8S_rRNA,_LSU-rRNA)


id: GO:0000701
description: Purine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0000701
golevel: 7
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0000701_Purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 10
name:
  GOBP.STRING_v12.0_1121391_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000724
description: Double-strand break repair via homologous recombination
memo: https://amigo.geneontology.org/amigo/term/GO:0000724
golevel: 9
name:
  GOBP.STRING_v12.0_1121391_STRINGid_GO:0000724_Double-strand_break_repair_via_homologous_recombination


id: GO:0000820
description: Regulation of glutamine family amino acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0000820
golevel: 9
name:
  GOBP.STRING_v12.0_1121391_STRINGid_GO:0000820_Regulation_of_glutamine_family_amino_acid_metabolic_process


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0002926
description: tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation
memo: https://amigo.geneontology.org/amigo/term/GO:0002926
golevel: 13
name:
  GOBP.STRING_v12.0_1121391_STRINGid_GO:0002926_tRNA_wobble_base_5-methoxycarbonylmethyl-2-thiouridinylation


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003864
description: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003864
golevel: 5
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0003864_3-methyl-2-oxobutanoate_hydroxymethyltransferase_activity


id: GO:0003871
description: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003871
golevel: 6
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0003871_5-methyltetrahydropteroyltriglutamate-homocysteine_S-methyltransferase_activity


id: GO:0003882
description: CDP-diacylglycerol-serine O-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003882
golevel: 6
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0003882_CDP-diacylglycerol-serine_O-phosphatidyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 4
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 6
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 5
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0004015
description: adenosylmethionine-8-amino-7-oxononanoate transaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004015
golevel: 5
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0004015_adenosylmethionine-8-amino-7-oxononanoate_transaminase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004316
description: 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004316
golevel: 6
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0004316_3-oxoacyl-[acyl-carrier-protein]_reductase_(NADPH)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
golevel: 6
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004318
description: Enoyl-[acyl-carrier-protein] reductase (NADH) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004318
golevel: 6
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0004318_Enoyl-[acyl-carrier-protein]_reductase_(NADH)_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004471
description: Malate dehydrogenase (decarboxylating) (NAD+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004471
golevel: 6
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0004471_Malate_dehydrogenase_(decarboxylating)_(NAD+)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
golevel: 5
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 6
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004489
description: Methylenetetrahydrofolate reductase (NAD(P)H) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004489
golevel: 5
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0004489_Methylenetetrahydrofolate_reductase_(NAD(P)H)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004591
description: Oxoglutarate dehydrogenase (succinyl-transferring) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004591
golevel: 5
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0004591_Oxoglutarate_dehydrogenase_(succinyl-transferring)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004648
description: O-phospho-L-serine:2-oxoglutarate aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004648
golevel: 5
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0004648_O-phospho-L-serine:2-oxoglutarate_aminotransferase_activity


id: GO:0004715
description: Non-membrane spanning protein tyrosine kinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004715
golevel: 7
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0004715_Non-membrane_spanning_protein_tyrosine_kinase_activity


id: GO:0004719
description: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004719
golevel: 8
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0004719_protein-L-isoaspartate_(D-aspartate)_O-methyltransferase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0005315
description: Inorganic phosphate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005315
golevel: 5
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0005315_Inorganic_phosphate_transmembrane_transporter_activity


id: GO:0005350
description: Pyrimidine nucleobase transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005350
golevel: 4
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0005350_Pyrimidine_nucleobase_transmembrane_transporter_activity


id: GO:0006388
description: tRNA splicing, via endonucleolytic cleavage and ligation
memo: https://amigo.geneontology.org/amigo/term/GO:0006388
golevel: 10
name:
  GOBP.STRING_v12.0_1121391_STRINGid_GO:0006388_tRNA_splicing,_via_endonucleolytic_cleavage_and_ligation


id: GO:0006490
description: Oligosaccharide-lipid intermediate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0006490
golevel: 5
name:
  GOBP.STRING_v12.0_1121391_STRINGid_GO:0006490_Oligosaccharide-lipid_intermediate_biosynthetic_process


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_1121391_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 11
name:
  GOBP.STRING_v12.0_1121391_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0007157
description: Heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
memo: https://amigo.geneontology.org/amigo/term/GO:0007157
golevel: 5
name:
  GOBP.STRING_v12.0_1121391_STRINGid_GO:0007157_Heterophilic_cell-cell_adhesion_via_plasma_membrane_cell_adhesion_molecules


id: GO:0008028
description: Monocarboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008028
golevel: 5
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0008028_Monocarboxylic_acid_transmembrane_transporter_activity


id: GO:0008108
description: UDP-glucose:hexose-1-phosphate uridylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008108
golevel: 6
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0008108_UDP-glucose:hexose-1-phosphate_uridylyltransferase_activity


id: GO:0008271
description: Secondary active sulfate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008271
golevel: 6
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0008271_Secondary_active_sulfate_transmembrane_transporter_activity


id: GO:0008425
description: 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008425
golevel: 7
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0008425_2-polyprenyl-6-methoxy-1,4-benzoquinone_methyltransferase_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
golevel: 5
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008674
description: 2-dehydro-3-deoxy-6-phosphogalactonate aldolase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008674
golevel: 5
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0008674_2-dehydro-3-deoxy-6-phosphogalactonate_aldolase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008686
description: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008686
golevel: 4
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0008686_3,4-dihydroxy-2-butanone-4-phosphate_synthase_activity


id: GO:0008690
description: 3-deoxy-manno-octulosonate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008690
golevel: 6
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0008690_3-deoxy-manno-octulosonate_cytidylyltransferase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
golevel: 6
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008759
description: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008759
golevel: 5
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0008759_UDP-3-O-[3-hydroxymyristoyl]_N-acetylglucosamine_deacetylase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008780
description: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008780
golevel: 6
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0008780_acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine_O-acyltransferase_activity


id: GO:0008817
description: cob(I)yrinic acid a,c-diamide adenosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008817
golevel: 4
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0008817_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008882
description: [Glutamate-ammonia-ligase] adenylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008882
golevel: 6
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0008882_[Glutamate-ammonia-ligase]_adenylyltransferase_activity


id: GO:0008939
description: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008939
golevel: 5
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0008939_Nicotinate-nucleotide-dimethylbenzimidazole_phosphoribosyltransferase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 4
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0008965
description: Phosphoenolpyruvate-protein phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008965
golevel: 5
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0008965_Phosphoenolpyruvate-protein_phosphotransferase_activity


id: GO:0008982
description: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008982
golevel: 5
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0008982_protein-N(PI)-phosphohistidine-sugar_phosphotransferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 6
name:
  GOMF.STRING_v12.0_1121391_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 9
name:
  GOBP.STRING_v12.0_1121391_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 9
name:
  GOBP.STRING_v12.0_1121391_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009139
description: Pyrimidine nucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009139
golevel: 9
name:
  GOBP.STRING_v12.0_1121391_STRINGid_GO:0009139_Pyrimidine_nucleoside_diphosphate_biosynthetic_process


