# geneInfo

ensembl_gene_id: SAMN02745133_00025
symbol: addB
gene_biotype: protein_coding
description:
  DNA helicase/exodeoxyribonuclease V, subunit B; ATP-dependent DNA helicase; Belongs to the helicase family. AddB/RexB type 1 subfamily.


ensembl_gene_id: SAMN02745133_00059
symbol: SHE29676.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: SAMN02745133_00067
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: SAMN02745133_00068
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: SAMN02745133_00073
symbol: nadE
gene_biotype: protein_coding
description:
  NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: SAMN02745133_00114
symbol: SHE31372.1
gene_biotype: protein_coding
description:
  Type I site-specific deoxyribonuclease, HsdR family; Subunit R is required for both nuclease and ATPase activities, but not for modification.


ensembl_gene_id: SAMN02745133_00131
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: SAMN02745133_00133
symbol: mutM
gene_biotype: protein_coding
description:
  DNA-(apurinic or apyrimidinic site) lyase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: SAMN02745133_00134
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.


ensembl_gene_id: SAMN02745133_00139
symbol: SHE32210.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.


ensembl_gene_id: SAMN02745133_00146
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: SAMN02745133_00148
symbol: infC
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: SAMN02745133_00150
symbol: rplT
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: SAMN02745133_00153
symbol: SHE32671.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN02745133_00155
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: SAMN02745133_00156
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: SAMN02745133_00163
symbol: SHE33014.1
gene_biotype: protein_coding
description:
  Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: SAMN02745133_00168
symbol: mutS2
gene_biotype: protein_coding
description:
  DNA mismatch repair protein, MutS family; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: SAMN02745133_00178
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.


ensembl_gene_id: SAMN02745133_00191
symbol: nadE-2
gene_biotype: protein_coding
description:
  NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.


ensembl_gene_id: SAMN02745133_00194
symbol: ruvC
gene_biotype: protein_coding
description:
  Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: SAMN02745133_00195
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: SAMN02745133_00196
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: SAMN02745133_00198
symbol: queH
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: SAMN02745133_00200
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine--tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: SAMN02745133_00201
symbol: tgt
gene_biotype: protein_coding
description:
  tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...]


ensembl_gene_id: SAMN02745133_00204
symbol: secD
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: SAMN02745133_00205
symbol: secF
gene_biotype: protein_coding
description:
  Protein translocase subunit secF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: SAMN02745133_00208
symbol: SHE34680.1
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: SAMN02745133_00215
symbol: pyrR
gene_biotype: protein_coding
description:
  Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.


ensembl_gene_id: SAMN02745133_00216
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: SAMN02745133_00217
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: SAMN02745133_00220
symbol: pyrK
gene_biotype: protein_coding
description:
  Dihydroorotate oxidase B, electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).


ensembl_gene_id: SAMN02745133_00222
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: SAMN02745133_00223
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II. Aspartic peptidase. MEROPS family A08; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: SAMN02745133_00224
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: SAMN02745133_00226
symbol: SHE35307.1
gene_biotype: protein_coding
description:
  Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains.


ensembl_gene_id: SAMN02745133_00228
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: SAMN02745133_00229
symbol: dapL
gene_biotype: protein_coding
description:
  LL-diaminopimelate aminotransferase apoenzyme; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate.


ensembl_gene_id: SAMN02745133_00235
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: SAMN02745133_00236
symbol: SHE35625.1
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: SAMN02745133_00237
symbol: priA
gene_biotype: protein_coding
description:
  Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: SAMN02745133_00238
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: SAMN02745133_00239
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: SAMN02745133_00241
symbol: SHE35800.1
gene_biotype: protein_coding
description:
  NusB antitermination factor; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: SAMN02745133_00242
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: SAMN02745133_00249
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: SAMN02745133_00252
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: SAMN02745133_00254
symbol: SHE36262.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745133_00255
symbol: SHE36300.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-); Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745133_00261
symbol: SHE36513.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745133_00290
symbol: sucC
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: SAMN02745133_00291
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: SAMN02745133_00293
symbol: SHE37547.1
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: SAMN02745133_00296
symbol: SHE37647.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol---serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN02745133_00307
symbol: queC
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)).


ensembl_gene_id: SAMN02745133_00309
symbol: queE
gene_biotype: protein_coding
description:
  Organic radical activating enzyme; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: SAMN02745133_00312
symbol: surE
gene_biotype: protein_coding
description:
  5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: SAMN02745133_00321
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: SAMN02745133_00325
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase 1; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.


ensembl_gene_id: SAMN02745133_00339
symbol: SHE38968.1
gene_biotype: protein_coding
description:
  Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: SAMN02745133_00360
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.


ensembl_gene_id: SAMN02745133_00364
symbol: SHE39888.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase (ATP); Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.


ensembl_gene_id: SAMN02745133_00368
symbol: lexA
gene_biotype: protein_coding
description:
  SOS-response transcriptional repressor, LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: SAMN02745133_00376
symbol: SHE40329.1
gene_biotype: protein_coding
description:
  Cobalt/nickel transport system ATP-binding protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.


ensembl_gene_id: SAMN02745133_00379
symbol: hfq
gene_biotype: protein_coding
description:
  RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: SAMN02745133_00380
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: SAMN02745133_00382
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: SAMN02745133_00385
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: SAMN02745133_00386
symbol: SHE40693.1
gene_biotype: protein_coding
description:
  Cell fate regulator YlbF, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family.


ensembl_gene_id: SAMN02745133_00387
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: SAMN02745133_00393
symbol: minC
gene_biotype: protein_coding
description:
  Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: SAMN02745133_00404
symbol: guaB
gene_biotype: protein_coding
description:
  IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: SAMN02745133_00417
symbol: recA
gene_biotype: protein_coding
description:
  Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: SAMN02745133_00422
symbol: SHE42150.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN02745133_00423
symbol: rimO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: SAMN02745133_00437
symbol: rnj
gene_biotype: protein_coding
description:
  Ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: SAMN02745133_00438
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: SAMN02745133_00440
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: SAMN02745133_00443
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: SAMN02745133_00448
symbol: SHE47351.1
gene_biotype: protein_coding
description:
  Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: SAMN02745133_00460
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: SAMN02745133_00468
symbol: ldh
gene_biotype: protein_coding
description:
  L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.


ensembl_gene_id: SAMN02745133_00482
symbol: cbiN
gene_biotype: protein_coding
description:
  Cobalt/nickel transport protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.


ensembl_gene_id: SAMN02745133_00483
symbol: cbiM
gene_biotype: protein_coding
description:
  Cobalt/nickel transport system permease protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.


ensembl_gene_id: SAMN02745133_00487
symbol: cobT
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: SAMN02745133_00497
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: SAMN02745133_00498
symbol: cbiA
gene_biotype: protein_coding
description:
  Hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) /cobyrinate a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: SAMN02745133_00499
symbol: cbiD
gene_biotype: protein_coding
description:
  Cobalt-precorrin 5B C1-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.


ensembl_gene_id: SAMN02745133_00508
symbol: cobQ
gene_biotype: protein_coding
description:
  Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: SAMN02745133_00509
symbol: cobD
gene_biotype: protein_coding
description:
  Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: SAMN02745133_00510
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: SAMN02745133_00533
symbol: glmS
gene_biotype: protein_coding
description:
  Glutamate mutase subunit S; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).


ensembl_gene_id: SAMN02745133_00535
symbol: glmE
gene_biotype: protein_coding
description:
  Glutamate mutase subunit E; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).


ensembl_gene_id: SAMN02745133_00541
symbol: rph
gene_biotype: protein_coding
description:
  RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: SAMN02745133_00542
symbol: SHE50458.1
gene_biotype: protein_coding
description:
  XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: SAMN02745133_00550
symbol: SHE50705.1
gene_biotype: protein_coding
description:
  RNA polymerase sporulation-specific sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02745133_00553
symbol: metN
gene_biotype: protein_coding
description:
  D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: SAMN02745133_00603
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: SAMN02745133_00604
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease, protease subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: SAMN02745133_00605
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: SAMN02745133_00607
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent proteinase. Serine peptidase. MEROPS family S16; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: SAMN02745133_00608
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: SAMN02745133_00612
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: SAMN02745133_00614
symbol: SHE52773.1
gene_biotype: protein_coding
description:
  Dihydrofolate synthase / folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: SAMN02745133_00615
symbol: rex
gene_biotype: protein_coding
description:
  Redox-sensing transcriptional repressor; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: SAMN02745133_00617
symbol: SHE52867.1
gene_biotype: protein_coding
description:
  Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: SAMN02745133_00623
symbol: SHE53051.1
gene_biotype: protein_coding
description:
  Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization.


ensembl_gene_id: SAMN02745133_00625
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: SAMN02745133_00626
symbol: rodA
gene_biotype: protein_coding
description:
  Rod shape determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: SAMN02745133_00632
symbol: rplU
gene_biotype: protein_coding
description:
  LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: SAMN02745133_00635
symbol: obg
gene_biotype: protein_coding
description:
  GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: SAMN02745133_00651
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: SAMN02745133_00654
symbol: SHE56587.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: SAMN02745133_00655
symbol: sepF
gene_biotype: protein_coding
description:
  Cell division inhibitor SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: SAMN02745133_00661
symbol: ileS
gene_biotype: protein_coding
description:
  Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: SAMN02745133_00666
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: SAMN02745133_00667
symbol: gcvPA
gene_biotype: protein_coding
description:
  Glycine dehydrogenase (decarboxylating) alpha subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: SAMN02745133_00668
symbol: gcvPB
gene_biotype: protein_coding
description:
  Glycine dehydrogenase (decarboxylating) beta subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily.


ensembl_gene_id: SAMN02745133_00669
symbol: SHE56946.1
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: SAMN02745133_00672
symbol: SHE57034.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: SAMN02745133_00677
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: SAMN02745133_00678
symbol: SHE57212.1
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: SAMN02745133_00679
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: SAMN02745133_00691
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: SAMN02745133_00698
symbol: iscS
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.


ensembl_gene_id: SAMN02745133_00700
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: SAMN02745133_00705
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: SAMN02745133_00709
symbol: SHE58222.1
gene_biotype: protein_coding
description:
  Putative holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: SAMN02745133_00715
symbol: mltG
gene_biotype: protein_coding
description:
  UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: SAMN02745133_00720
symbol: lgt-2
gene_biotype: protein_coding
description:
  Phosphatidylglycerol:prolipoprotein diacylglycerol transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: SAMN02745133_00725
symbol: SHE58820.1
gene_biotype: protein_coding
description:
  Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-); Belongs to the ABC transporter superfamily.


ensembl_gene_id: SAMN02745133_00763
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: SAMN02745133_00764
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: SAMN02745133_00765
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: SAMN02745133_00766
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: SAMN02745133_00794
symbol: SHE61535.1
gene_biotype: protein_coding
description:
  Type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: SAMN02745133_00797
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: SAMN02745133_00799
symbol: efp
gene_biotype: protein_coding
description:
  Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: SAMN02745133_00814
symbol: SHE62278.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: SAMN02745133_00818
symbol: nusB
gene_biotype: protein_coding
description:
  NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: SAMN02745133_00821
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: SAMN02745133_00822
symbol: folD
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: SAMN02745133_00824
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: SAMN02745133_00828
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: SAMN02745133_00831
symbol: nadK
gene_biotype: protein_coding
description:
  NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: SAMN02745133_00836
symbol: SHE63095.1
gene_biotype: protein_coding
description:
  Two-component system, response regulator, stage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.


ensembl_gene_id: SAMN02745133_00841
symbol: SHE65387.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, cofD-related; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.


ensembl_gene_id: SAMN02745133_00845
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: SAMN02745133_00849
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: SAMN02745133_00850
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: SAMN02745133_00857
symbol: SHE65895.1
gene_biotype: protein_coding
description:
  Cell division protein FtsX; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: SAMN02745133_00858
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: SAMN02745133_00862
symbol: prfB
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 2 (bRF-2); Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: SAMN02745133_00863
symbol: secA
gene_biotype: protein_coding
description:
  Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: SAMN02745133_00872
symbol: hpf
gene_biotype: protein_coding
description:
  SSU ribosomal protein S30P/sigma 54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: SAMN02745133_00886
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: SAMN02745133_00889
symbol: murJ
gene_biotype: protein_coding
description:
  Putative peptidoglycan lipid II flippase; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: SAMN02745133_00895
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: SAMN02745133_00914
symbol: bioA
gene_biotype: protein_coding
description:
  Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.


ensembl_gene_id: SAMN02745133_00915
symbol: bioC
gene_biotype: protein_coding
description:
  malonyl-CoA O-methyltransferase; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway.


ensembl_gene_id: SAMN02745133_00917
symbol: SHE67870.1
gene_biotype: protein_coding
description:
  8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.


ensembl_gene_id: SAMN02745133_00918
symbol: bioD
gene_biotype: protein_coding
description:
  Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: SAMN02745133_00919
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: SAMN02745133_00942
symbol: SHE68668.1
gene_biotype: protein_coding
description:
  N-acetylmannosaminyltransferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.


ensembl_gene_id: SAMN02745133_00946
symbol: mprF
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.


ensembl_gene_id: SAMN02745133_00955
symbol: SHE69155.1
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: SAMN02745133_00956
symbol: SHE69191.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: SAMN02745133_00957
symbol: SHE69228.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: SAMN02745133_00958
symbol: SHE69267.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.


ensembl_gene_id: SAMN02745133_00967
symbol: SHE69600.1
gene_biotype: protein_coding
description:
  Fur family transcriptional regulator, peroxide stress response regulator; Belongs to the Fur family.


ensembl_gene_id: SAMN02745133_00971
symbol: secA-2
gene_biotype: protein_coding
description:
  Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.


ensembl_gene_id: SAMN02745133_00976
symbol: SHE71798.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-); Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: SAMN02745133_01025
symbol: SHE73438.1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridine1911/1915/1917 synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: SAMN02745133_01028
symbol: SHE73550.1
gene_biotype: protein_coding
description:
  Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02745133_01031
symbol: hslO
gene_biotype: protein_coding
description:
  Molecular chaperone Hsp33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: SAMN02745133_01041
symbol: SHE74054.1
gene_biotype: protein_coding
description:
  Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: SAMN02745133_01051
symbol: rplY
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: SAMN02745133_01098
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: SAMN02745133_01110
symbol: SHE77975.1
gene_biotype: protein_coding
description:
  Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN02745133_01111
symbol: SHE78013.1
gene_biotype: protein_coding
description:
  Membrane fusion protein, cobalt-zinc-cadmium efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN02745133_01138
symbol: glmS-2
gene_biotype: protein_coding
description:
  Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: SAMN02745133_01140
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: SAMN02745133_01142
symbol: dacA
gene_biotype: protein_coding
description:
  Diadenylate cyclase; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: SAMN02745133_01144
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: SAMN02745133_01145
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.


ensembl_gene_id: SAMN02745133_01146
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: SAMN02745133_01147
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: SAMN02745133_01149
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: SAMN02745133_01157
symbol: SHE79568.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: SAMN02745133_01159
symbol: argD
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase apoenzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: SAMN02745133_01160
symbol: argB
gene_biotype: protein_coding
description:
  N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: SAMN02745133_01161
symbol: argJ
gene_biotype: protein_coding
description:
  Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: SAMN02745133_01162
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: SAMN02745133_01164
symbol: SHE79808.1
gene_biotype: protein_coding
description:
  Uncharacterized protein, PH0010 family/AmmeMemoRadiSam system protein A/AmmeMemoRadiSam system protein B.


ensembl_gene_id: SAMN02745133_01170
symbol: rplM
gene_biotype: protein_coding
description:
  LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: SAMN02745133_01173
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: SAMN02745133_01175
symbol: SHE80234.1
gene_biotype: protein_coding
description:
  Energy-coupling factor transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: SAMN02745133_01179
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN02745133_01180
symbol: rpsD
gene_biotype: protein_coding
description:
  SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: SAMN02745133_01181
symbol: rpsK
gene_biotype: protein_coding
description:
  SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: SAMN02745133_01182
symbol: rpsM
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: SAMN02745133_01183
symbol: infA
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 1 (bIF-1); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: SAMN02745133_01185
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: SAMN02745133_01186
symbol: secY
gene_biotype: protein_coding
description:
  Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: SAMN02745133_01187
symbol: rplO
gene_biotype: protein_coding
description:
  LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: SAMN02745133_01189
symbol: rpsE
gene_biotype: protein_coding
description:
  SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: SAMN02745133_01190
symbol: rplR
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: SAMN02745133_01191
symbol: rplF
gene_biotype: protein_coding
description:
  LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: SAMN02745133_01192
symbol: rpsH
gene_biotype: protein_coding
description:
  SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: SAMN02745133_01193
symbol: rpsZ
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: SAMN02745133_01194
symbol: rplE
gene_biotype: protein_coding
description:
  LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: SAMN02745133_01195
symbol: rplX
gene_biotype: protein_coding
description:
  LSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: SAMN02745133_01196
symbol: rplN
gene_biotype: protein_coding
description:
  LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: SAMN02745133_01197
symbol: rpsQ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: SAMN02745133_01199
symbol: rplP
gene_biotype: protein_coding
description:
  LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: SAMN02745133_01200
symbol: rpsC
gene_biotype: protein_coding
description:
  SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: SAMN02745133_01201
symbol: rplV
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: SAMN02745133_01202
symbol: rpsS
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: SAMN02745133_01203
symbol: rplB
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: SAMN02745133_01204
symbol: rplW
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: SAMN02745133_01206
symbol: rplC
gene_biotype: protein_coding
description:
  LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: SAMN02745133_01207
symbol: rpsJ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: SAMN02745133_01208
symbol: tuf
gene_biotype: protein_coding
description:
  Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: SAMN02745133_01216
symbol: SHE81677.1
gene_biotype: protein_coding
description:
  23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN02745133_01219
symbol: SHE81793.1
gene_biotype: protein_coding
description:
  Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: SAMN02745133_01220
symbol: mrnC
gene_biotype: protein_coding
description:
  Ribonuclease-3 family protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.


ensembl_gene_id: SAMN02745133_01223
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: SAMN02745133_01226
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: SAMN02745133_01227
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: SAMN02745133_01231
symbol: disA
gene_biotype: protein_coding
description:
  Diadenylate cyclase; Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation; upon encountering a lesion, the DisA focus arrests at the damaged site and halts c-di-AMP synthesis.


ensembl_gene_id: SAMN02745133_01232
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA/Sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: SAMN02745133_01237
symbol: clpB
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: SAMN02745133_01238
symbol: dnaJ
gene_biotype: protein_coding
description:
  Curved DNA-binding protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between Dna [...]


ensembl_gene_id: SAMN02745133_01252
symbol: ychF
gene_biotype: protein_coding
description:
  Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: SAMN02745133_01262
symbol: speH
gene_biotype: protein_coding
description:
  Adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.


ensembl_gene_id: SAMN02745133_01264
symbol: menG
gene_biotype: protein_coding
description:
  Demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).


ensembl_gene_id: SAMN02745133_01267
symbol: mqnE
gene_biotype: protein_coding
description:
  De-hypoxanthine futalosine cyclase; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate.


ensembl_gene_id: SAMN02745133_01268
symbol: mqnA
gene_biotype: protein_coding
description:
  Futalosine synthase; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: SAMN02745133_01269
symbol: mqnC
gene_biotype: protein_coding
description:
  De-hypoxanthine futalosine cyclase; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: SAMN02745133_01271
symbol: SHE85388.1
gene_biotype: protein_coding
description:
  5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: SAMN02745133_01273
symbol: SHE85452.1
gene_biotype: protein_coding
description:
  Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: SAMN02745133_01277
symbol: selA
gene_biotype: protein_coding
description:
  L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.


ensembl_gene_id: SAMN02745133_01291
symbol: SHE85971.1
gene_biotype: protein_coding
description:
  Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745133_01293
symbol: xpt
gene_biotype: protein_coding
description:
  Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.


ensembl_gene_id: SAMN02745133_01308
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: SAMN02745133_01309
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: SAMN02745133_01370
symbol: SHE88537.1
gene_biotype: protein_coding
description:
  Putative phosphotransacetylase; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.


ensembl_gene_id: SAMN02745133_01371
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: SAMN02745133_01376
symbol: SHE90347.1
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: SAMN02745133_01402
symbol: crcB
gene_biotype: protein_coding
description:
  CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: SAMN02745133_01403
symbol: crcB-2
gene_biotype: protein_coding
description:
  Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: SAMN02745133_01415
symbol: SHE91634.1
gene_biotype: protein_coding
description:
  dUTP pyrophosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.


ensembl_gene_id: SAMN02745133_01421
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: SAMN02745133_01433
symbol: fni
gene_biotype: protein_coding
description:
  Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).


ensembl_gene_id: SAMN02745133_01460
symbol: SHE93088.1
gene_biotype: protein_coding
description:
  Mo-nitrogenase MoFe protein subunit NifK; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.


ensembl_gene_id: SAMN02745133_01464
symbol: nifH
gene_biotype: protein_coding
description:
  Mo-nitrogenase iron protein subunit NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.


ensembl_gene_id: SAMN02745133_01468
symbol: SHE93366.1
gene_biotype: protein_coding
description:
  RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN02745133_01478
symbol: SHE93728.1
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: SAMN02745133_01518
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: SAMN02745133_01519
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: SAMN02745133_01520
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: SAMN02745133_01521
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: SAMN02745133_01522
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: SAMN02745133_01523
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN02745133_01524
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: SAMN02745133_01525
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN02745133_01526
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: SAMN02745133_01529
symbol: SHE97000.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: SAMN02745133_01532
symbol: glyA
gene_biotype: protein_coding
description:
  Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: SAMN02745133_01534
symbol: SHE97173.1
gene_biotype: protein_coding
description:
  Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: SAMN02745133_01535
symbol: mntP
gene_biotype: protein_coding
description:
  Putative Mn2+ efflux pump MntP; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.


ensembl_gene_id: SAMN02745133_01536
symbol: SHE97235.1
gene_biotype: protein_coding
description:
  Translation factor SUA5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: SAMN02745133_01538
symbol: prmC
gene_biotype: protein_coding
description:
  Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: SAMN02745133_01539
symbol: prfA
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 1 (bRF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: SAMN02745133_01544
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: SAMN02745133_01546
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: SAMN02745133_01552
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: SAMN02745133_01562
symbol: SHE98061.1
gene_biotype: protein_coding
description:
  Indolepyruvate ferredoxin oxidoreductase alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.


ensembl_gene_id: SAMN02745133_01563
symbol: SHE98088.1
gene_biotype: protein_coding
description:
  phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).


ensembl_gene_id: SAMN02745133_01571
symbol: cbiA-2
gene_biotype: protein_coding
description:
  Hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: SAMN02745133_01587
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: SAMN02745133_01595
symbol: mqnD
gene_biotype: protein_coding
description:
  1,4-dihydroxy-6-naphthoate synthase; Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2); Belongs to the MqnA/MqnD family. MqnD subfamily.


ensembl_gene_id: SAMN02745133_01596
symbol: mqnB
gene_biotype: protein_coding
description:
  Futalosine hydrolase; Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: SAMN02745133_01600
symbol: rlmH
gene_biotype: protein_coding
description:
  23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: SAMN02745133_01637
symbol: SHF01961.1
gene_biotype: protein_coding
description:
  Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: SAMN02745133_01645
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: SAMN02745133_01658
symbol: bshC
gene_biotype: protein_coding
description:
  Bacillithiol biosynthesis cysteine-adding enzyme BshC; Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH.


ensembl_gene_id: SAMN02745133_01664
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: SAMN02745133_01665
symbol: proA
gene_biotype: protein_coding
description:
  Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: SAMN02745133_01666
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: SAMN02745133_01669
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: SAMN02745133_01672
symbol: SHF03214.1
gene_biotype: protein_coding
description:
  Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.


ensembl_gene_id: SAMN02745133_01674
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol 3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN02745133_01675
symbol: plsY
gene_biotype: protein_coding
description:
  Acyl-phosphate glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: SAMN02745133_01676
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: SAMN02745133_01682
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: SAMN02745133_01683
symbol: SHF03624.1
gene_biotype: protein_coding
description:
  1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: SAMN02745133_01685
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: SAMN02745133_01690
symbol: SHF03859.1
gene_biotype: protein_coding
description:
  Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.


ensembl_gene_id: SAMN02745133_01695
symbol: SHF04037.1
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: SAMN02745133_01703
symbol: scpB
gene_biotype: protein_coding
description:
  Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: SAMN02745133_01704
symbol: scpA
gene_biotype: protein_coding
description:
  Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: SAMN02745133_01707
symbol: SHF04441.1
gene_biotype: protein_coding
description:
  tRNA nucleotidyltransferase (CCA-adding enzyme); Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: SAMN02745133_01708
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: SAMN02745133_01729
symbol: moaC
gene_biotype: protein_coding
description:
  Cyclic pyranopterin monophosphate synthase subunit MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: SAMN02745133_01730
symbol: moaA
gene_biotype: protein_coding
description:
  Cyclic pyranopterin monophosphate synthase subunit MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: SAMN02745133_01756
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium transporter; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: SAMN02745133_01758
symbol: sigI
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily.


ensembl_gene_id: SAMN02745133_01759
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: SAMN02745133_01760
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: SAMN02745133_01763
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: SAMN02745133_01765
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase component 1; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]


ensembl_gene_id: SAMN02745133_01770
symbol: pfkA-2
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: SAMN02745133_01771
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: SAMN02745133_01772
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: SAMN02745133_01789
symbol: nth
gene_biotype: protein_coding
description:
  DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: SAMN02745133_01790
symbol: SHF08538.1
gene_biotype: protein_coding
description:
  tRNA (cytidine/uridine-2'-O-)-methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: SAMN02745133_01798
symbol: leuC-2
gene_biotype: protein_coding
description:
  3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: SAMN02745133_01800
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: SAMN02745133_01801
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: SAMN02745133_01802
symbol: gatC
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: SAMN02745133_01806
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: SAMN02745133_01807
symbol: amj
gene_biotype: protein_coding
description:
  Protein of unknown function; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: SAMN02745133_01812
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit hisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: SAMN02745133_01813
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.


ensembl_gene_id: SAMN02745133_01814
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit hisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: SAMN02745133_01816
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: SAMN02745133_01817
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: SAMN02745133_01818
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase catalytic subunit; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: SAMN02745133_01819
symbol: hisZ
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: SAMN02745133_01825
symbol: pdxS
gene_biotype: protein_coding
description:
  Pyridoxal phosphate synthase yaaD subunit; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.


ensembl_gene_id: SAMN02745133_01826
symbol: pdxT
gene_biotype: protein_coding
description:
  Pyridoxal phosphate synthase yaaE subunit; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.


ensembl_gene_id: SAMN02745133_01830
symbol: SHF10936.1
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SAMN02745133_01831
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: SAMN02745133_01836
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA-adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN02745133_01839
symbol: SHF11104.1
gene_biotype: protein_coding
description:
  Pyruvate formate lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.


ensembl_gene_id: SAMN02745133_01848
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN02745133_01849
symbol: SHF11355.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: SAMN02745133_01850
symbol: recR
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: SAMN02745133_01865
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: SAMN02745133_01869
symbol: rsmI
gene_biotype: protein_coding
description:
  16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: SAMN02745133_01872
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: SAMN02745133_01882
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole-phosphate synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: SAMN02745133_01885
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: SAMN02745133_01886
symbol: rsmA
gene_biotype: protein_coding
description:
  Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: SAMN02745133_01905
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: SAMN02745133_01910
symbol: glmU
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: SAMN02745133_01911
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: SAMN02745133_01935
symbol: recD2
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V alpha subunit; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.


ensembl_gene_id: SAMN02745133_01943
symbol: SHF15402.1
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...]


ensembl_gene_id: SAMN02745133_02035
symbol: SHF19337.1
gene_biotype: protein_coding
description:
  Transcriptional modulator of MazE/toxin, MazF; Toxic component of a type II toxin-antitoxin (TA) system.


ensembl_gene_id: SAMN02745133_02040
symbol: thiC
gene_biotype: protein_coding
description:
  Hydroxymethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.


ensembl_gene_id: SAMN02745133_02042
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-phosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: SAMN02745133_02046
symbol: tsaD
gene_biotype: protein_coding
description:
  O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: SAMN02745133_02055
symbol: SHF19885.1
gene_biotype: protein_coding
description:
  Molybdopterin molybdochelatase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN02745133_02058
symbol: fdhD
gene_biotype: protein_coding
description:
  FdhD protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.


ensembl_gene_id: SAMN02745133_02060
symbol: groS
gene_biotype: protein_coding
description:
  Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: SAMN02745133_02061
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: SAMN02745133_02069
symbol: acsA
gene_biotype: protein_coding
description:
  acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: SAMN02745133_02072
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-[acyl-carrier-protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: SAMN02745133_02073
symbol: nnrE
gene_biotype: protein_coding
description:
  NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of bot [...]


ensembl_gene_id: SAMN02745133_02078
symbol: SHF20652.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: SAMN02745133_02093
symbol: ku
gene_biotype: protein_coding
description:
  DNA end-binding protein Ku; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.


ensembl_gene_id: SAMN02745133_02095
symbol: SHF22037.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains.


ensembl_gene_id: SAMN02745133_02113
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: SAMN02745133_02114
symbol: trmFO
gene_biotype: protein_coding
description:
  methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: SAMN02745133_02115
symbol: xerC
gene_biotype: protein_coding
description:
  Integrase/recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: SAMN02745133_02116
symbol: hslV
gene_biotype: protein_coding
description:
  ATP dependent peptidase CodWX, CodW component. Threonine peptidase. MEROPS family T01B; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: SAMN02745133_02117
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent HslUV protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: SAMN02745133_02118
symbol: codY
gene_biotype: protein_coding
description:
  Transcriptional pleiotropic repressor; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family.


ensembl_gene_id: SAMN02745133_02120
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: SAMN02745133_02122
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: SAMN02745133_02125
symbol: SHF23034.1
gene_biotype: protein_coding
description:
  Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: SAMN02745133_02128
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: SAMN02745133_02130
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: SAMN02745133_02131
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]


ensembl_gene_id: SAMN02745133_02133
symbol: polC
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit alpha; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN02745133_02138
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: SAMN02745133_02142
symbol: infB
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: SAMN02745133_02143
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: SAMN02745133_02145
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: SAMN02745133_02149
symbol: rpsO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: SAMN02745133_02160
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: SAMN02745133_02168
symbol: SHF25239.1
gene_biotype: protein_coding
description:
  Sodium:solute symporter family protein; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: SAMN02745133_02180
symbol: menC
gene_biotype: protein_coding
description:
  O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).


ensembl_gene_id: SAMN02745133_02235
symbol: SHF28031.1
gene_biotype: protein_coding
description:
  Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.


ensembl_gene_id: SAMN02745133_02236
symbol: SHF28064.1
gene_biotype: protein_coding
description:
  4-hydroxy 2-oxovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family.


ensembl_gene_id: SAMN02745133_02245
symbol: SHF28345.1
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase.


ensembl_gene_id: SAMN02745133_02261
symbol: xerD
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerD subunit; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: SAMN02745133_02262
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: SAMN02745133_02266
symbol: spoIIAB
gene_biotype: protein_coding
description:
  Stage II sporulation protein AB (anti-sigma F factor); Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.


ensembl_gene_id: SAMN02745133_02267
symbol: SHF29048.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma subunit, RpoX/SigF; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02745133_02272
symbol: mobA
gene_biotype: protein_coding
description:
  Molybdenum cofactor guanylyltransferase; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.


ensembl_gene_id: SAMN02745133_02273
symbol: tatA
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: SAMN02745133_02276
symbol: SHF29264.1
gene_biotype: protein_coding
description:
  Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02745133_02280
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.


ensembl_gene_id: SAMN02745133_02281
symbol: SHF29398.1
gene_biotype: protein_coding
description:
  neurotransmitter:Na+ symporter, NSS family; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.


ensembl_gene_id: SAMN02745133_02286
symbol: SHF29519.1
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Cas6 family; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA).


ensembl_gene_id: SAMN02745133_02293
symbol: SHF29720.1
gene_biotype: protein_coding
description:
  CRISPR-associated exonuclease, Cas4 family; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.


ensembl_gene_id: SAMN02745133_02294
symbol: cas1
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Cas1 family; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: SAMN02745133_02297
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Cas2 family; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: SAMN02745133_02302
symbol: SHF30698.1
gene_biotype: protein_coding
description:
  Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: SAMN02745133_02304
symbol: ribBA
gene_biotype: protein_coding
description:
  3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: SAMN02745133_02305
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: SAMN02745133_02307
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN02745133_02309
symbol: gpr
gene_biotype: protein_coding
description:
  Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.


ensembl_gene_id: SAMN02745133_02311
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: SAMN02745133_02319
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate:acyl-[acyl carrier protein] acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: SAMN02745133_02320
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase-3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: SAMN02745133_02323
symbol: SHF31283.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN02745133_02325
symbol: SHF31346.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: SAMN02745133_02326
symbol: rnc
gene_biotype: protein_coding
description:
  RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: SAMN02745133_02327
symbol: smc
gene_biotype: protein_coding
description:
  Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: SAMN02745133_02328
symbol: ftsY
gene_biotype: protein_coding
description:
  Fused signal recognition particle receptor; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: SAMN02745133_02330
symbol: SHF31496.1
gene_biotype: protein_coding
description:
  Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage.


ensembl_gene_id: SAMN02745133_02331
symbol: mtnA
gene_biotype: protein_coding
description:
  Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: SAMN02745133_02332
symbol: ahcY
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: SAMN02745133_02334
symbol: mtaD
gene_biotype: protein_coding
description:
  5-methylthioadenosine/S-adenosylhomocysteine deaminase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family.


ensembl_gene_id: SAMN02745133_02337
symbol: SHF31733.1
gene_biotype: protein_coding
description:
  Putrescine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN02745133_02338
symbol: SHF31768.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.


ensembl_gene_id: SAMN02745133_02339
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: SAMN02745133_02343
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: SAMN02745133_02344
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (Guanine37-N(1)-) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: SAMN02745133_02345
symbol: rplS
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: SAMN02745133_02347
symbol: SHF32061.1
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: SAMN02745133_02349
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: SAMN02745133_02350
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN02745133_02351
symbol: SHF32165.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: SAMN02745133_02352
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: SAMN02745133_02353
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: SAMN02745133_02354
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN02745133_02355
symbol: SHF32285.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN02745133_02356
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: SAMN02745133_02359
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: SAMN02745133_02369
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: SAMN02745133_02372
symbol: ubiX
gene_biotype: protein_coding
description:
  4-hydroxy-3-polyprenylbenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: SAMN02745133_02380
symbol: SHF33903.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: SAMN02745133_02382
symbol: SHF33967.1
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: SAMN02745133_02385
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: SAMN02745133_02386
symbol: sigA
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: SAMN02745133_02393
symbol: SHF34229.1
gene_biotype: protein_coding
description:
  Dinuclear metal center protein, YbgI/SA1388 family; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.


ensembl_gene_id: SAMN02745133_02412
symbol: cheB
gene_biotype: protein_coding
description:
  Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: SAMN02745133_02418
symbol: SHF35025.1
gene_biotype: protein_coding
description:
  Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: SAMN02745133_02431
symbol: purN
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: SAMN02745133_02433
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: SAMN02745133_02434
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase subunit II; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to [...]


ensembl_gene_id: SAMN02745133_02435
symbol: purQ
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase subunit I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to  [...]


ensembl_gene_id: SAMN02745133_02436
symbol: purS
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist in  [...]


ensembl_gene_id: SAMN02745133_02439
symbol: purE
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: SAMN02745133_02444
symbol: SHF36549.1
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: SAMN02745133_02453
symbol: cheD
gene_biotype: protein_coding
description:
  Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: SAMN02745133_02460
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: SAMN02745133_02461
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: SAMN02745133_02462
symbol: SHF37006.1
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: SAMN02745133_02463
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: SAMN02745133_02464
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: SAMN02745133_02467
symbol: SHF37130.1
gene_biotype: protein_coding
description:
  Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: SAMN02745133_02476
symbol: SHF37365.1
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: SAMN02745133_02479
symbol: SHF37440.1
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: SAMN02745133_02484
symbol: SHF37568.1
gene_biotype: protein_coding
description:
  Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: SAMN02745133_02485
symbol: fliW
gene_biotype: protein_coding
description:
  Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.


ensembl_gene_id: SAMN02745133_02486
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: SAMN02745133_02496
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: SAMN02745133_02498
symbol: SHF38543.1
gene_biotype: protein_coding
description:
  Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN02745133_02504
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.


ensembl_gene_id: SAMN02745133_02510
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: SAMN02745133_02511
symbol: ftsH
gene_biotype: protein_coding
description:
  Membrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: SAMN02745133_02512
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: SAMN02745133_02522
symbol: SHF39113.1
gene_biotype: protein_coding
description:
  DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: SAMN02745133_02526
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN02745133_02528
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: SAMN02745133_02586
symbol: SHF41376.1
gene_biotype: protein_coding
description:
  23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: SAMN02745133_02593
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA (cytosine1402-N4)-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: SAMN02745133_02596
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: SAMN02745133_02597
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: SAMN02745133_02598
symbol: mraY
gene_biotype: protein_coding
description:
  Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: SAMN02745133_02599
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: SAMN02745133_02601
symbol: murG
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: SAMN02745133_02610
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: SAMN02745133_02611
symbol: SHF42628.1
gene_biotype: protein_coding
description:
  Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.


ensembl_gene_id: SAMN02745133_02612
symbol: SHF42650.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 29 subunit, SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02745133_02613
symbol: SHF42678.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma subunit, RpsG/SigG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02745133_02618
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: SAMN02745133_02620
symbol: SHF42876.1
gene_biotype: protein_coding
description:
  Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.


ensembl_gene_id: SAMN02745133_02623
symbol: SHF42959.1
gene_biotype: protein_coding
description:
  Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family.


ensembl_gene_id: SAMN02745133_02636
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: SAMN02745133_02637
symbol: SHF43784.1
gene_biotype: protein_coding
description:
  Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: SAMN02745133_02642
symbol: rpsR
gene_biotype: protein_coding
description:
  SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: SAMN02745133_02662
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: SAMN02745133_02663
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: SAMN02745133_02664
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase trmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: SAMN02745133_02667
symbol: SHF44460.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: SAMN02745133_02668
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: SAMN02745133_02669
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: SAMN02745133_02670
symbol: SHF44535.1
gene_biotype: protein_coding
description:
  DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]


ensembl_gene_id: SAMN02745133_02672
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: SAMN02745133_02674
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN02745133_02675
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN02745133_02723
symbol: recA-2
gene_biotype: protein_coding
description:
  RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: SAMN02745133_02732
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: SAMN02745133_02735
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: SAMN02745133_02760
symbol: SHF48386.1
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN02745133_02762
symbol: ybeY
gene_biotype: protein_coding
description:
  Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: SAMN02745133_02771
symbol: SHF48671.1
gene_biotype: protein_coding
description:
  16S rRNA (uracil1498-N3)-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: SAMN02745133_02772
symbol: prmA
gene_biotype: protein_coding
description:
  [LSU ribosomal protein L11P]-lysine N-methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: SAMN02745133_02773
symbol: dnaJ-2
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: SAMN02745133_02775
symbol: grpE
gene_biotype: protein_coding
description:
  Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...]


ensembl_gene_id: SAMN02745133_02777
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: SAMN02745133_02778
symbol: SHF48844.1
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen-3 oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: SAMN02745133_02779
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: SAMN02745133_02795
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: SAMN02745133_02797
symbol: SHF49633.1
gene_biotype: protein_coding
description:
  tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: SAMN02745133_02798
symbol: coaX
gene_biotype: protein_coding
description:
  Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: SAMN02745133_02799
symbol: SHF49677.1
gene_biotype: protein_coding
description:
  Nitrite/Sulfite reductase ferredoxin-like half domain-containing protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: SAMN02745133_02801
symbol: birA
gene_biotype: protein_coding
description:
  Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: SAMN02745133_02804
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: SAMN02745133_02805
symbol: panD
gene_biotype: protein_coding
description:
  L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: SAMN02745133_02806
symbol: panC
gene_biotype: protein_coding
description:
  Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: SAMN02745133_02807
symbol: panB
gene_biotype: protein_coding
description:
  Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: SAMN02745133_02812
symbol: SHF49989.1
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: SAMN02745133_02893
symbol: speE-2
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family.


ensembl_gene_id: SAMN02745133_02904
symbol: SHF53146.1
gene_biotype: protein_coding
description:
  Heavy metal efflux pump, CzcA family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN02745133_02920
symbol: SHF53832.1
gene_biotype: protein_coding
description:
  tRNA-binding EMAP/Myf domain-containing protein; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: SAMN02745133_02929
symbol: SHF54073.1
gene_biotype: protein_coding
description:
  Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745133_02933
symbol: rbsK
gene_biotype: protein_coding
description:
  Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: SAMN02745133_02990
symbol: metAA
gene_biotype: protein_coding
description:
  Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.


ensembl_gene_id: SAMN02745133_03008
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: SAMN02745133_03010
symbol: SHF57615.1
gene_biotype: protein_coding
description:
  FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase.


ensembl_gene_id: SAMN02745133_03026
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: SAMN02745133_03027
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: SAMN02745133_03028
symbol: rplK
gene_biotype: protein_coding
description:
  LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: SAMN02745133_03029
symbol: rplA
gene_biotype: protein_coding
description:
  LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: SAMN02745133_03030
symbol: rplJ
gene_biotype: protein_coding
description:
  LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: SAMN02745133_03031
symbol: rplL
gene_biotype: protein_coding
description:
  LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: SAMN02745133_03032
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN02745133_03035
symbol: rpsL
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: SAMN02745133_03036
symbol: rpsG
gene_biotype: protein_coding
description:
  SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: SAMN02745133_03037
symbol: fusA
gene_biotype: protein_coding
description:
  Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...]


ensembl_gene_id: SAMN02745133_03055
symbol: hypA
gene_biotype: protein_coding
description:
  Hydrogenase nickel incorporation protein HypA/HybF; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.


ensembl_gene_id: SAMN02745133_03083
symbol: SHF60995.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: SAMN02745133_03084
symbol: hppA
gene_biotype: protein_coding
description:
  K(+)-stimulated pyrophosphate-energized sodium pump; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily.


ensembl_gene_id: SAMN02745133_03087
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: SAMN02745133_03114
symbol: SHF62437.1
gene_biotype: protein_coding
description:
  Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; Belongs to the RuBisCO large chain family.


ensembl_gene_id: SAMN02745133_03118
symbol: fbp
gene_biotype: protein_coding
description:
  Fructose 1,6-bisphosphate aldolase/phosphatase; Catalyzes two subsequent steps in gluconeogenesis: the aldol condensation of dihydroxyacetone phosphate (DHAP) and glyceraldehyde-3- phosphate (GA3P) to fructose-1,6-bisphosphate (FBP), and the dephosphorylation of FBP to fructose-6-phosphate (F6P).


ensembl_gene_id: SAMN02745133_03123
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


# pathwayInfo

id: CL:1015
description: Mixed, incl. Amino acid salvage, and Phosphorylase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1015_Mixed,_incl._Amino_acid_salvage,_and_Phosphorylase_superfamily


id: CL:102
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:102_Structural_constituent_of_ribosome


id: CL:1026
description: Carbohydrate metabolic process, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1026_Carbohydrate_metabolic_process,_and_Nucleotide-diphospho-sugar_transferases


id: CL:1027
description: Mixed, incl. Polysaccharide biosynthetic process, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1027_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Nucleotide-diphospho-sugar_transferases


id: CL:1028
description: Mixed, incl. Polysaccharide biosynthetic process, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1028_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Nucleotide-diphospho-sugar_transferases


id: CL:1029
description: Mixed, incl. Polysaccharide biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1029_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:1030
description: O-Antigen nucleotide sugar biosynthesis, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1030_O-Antigen_nucleotide_sugar_biosynthesis,_and_Nucleotide-diphospho-sugar_transferases


id: CL:1032
description: O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1032_O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferase_family_2


id: CL:1034
description: Mixed, incl. Polyketide sugar unit biosynthesis, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1034_Mixed,_incl._Polyketide_sugar_unit_biosynthesis,_and_Glycosyl_transferase_family_2


id: CL:1036
description: Mixed, incl. Glycosyl transferase family 2, and Nucleotidyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1036_Mixed,_incl._Glycosyl_transferase_family_2,_and_Nucleotidyl_transferase


id: CL:104
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:104_Structural_constituent_of_ribosome


id: CL:107
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:107_Structural_constituent_of_ribosome


id: CL:1074
description: Mixed, incl. DegT/DnrJ/EryC1/StrS aminotransferase, and Liposaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1074_Mixed,_incl._DegT/DnrJ/EryC1/StrS_aminotransferase,_and_Liposaccharide_metabolic_process


id: CL:1078
description: Mixed, incl. UDP-N-acetylglucosamine 2-epimerase, and Hexapeptide transferase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1078_Mixed,_incl._UDP-N-acetylglucosamine_2-epimerase,_and_Hexapeptide_transferase,_conserved_site


id: CL:108
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:108_Structural_constituent_of_ribosome


id: CL:1094
description: Glucan metabolic process, and Alpha-glucan phosphorylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1094_Glucan_metabolic_process,_and_Alpha-glucan_phosphorylase


id: CL:1098
description: Glycogen metabolic process, and Immunoglobulin E-set
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1098_Glycogen_metabolic_process,_and_Immunoglobulin_E-set


id: CL:110
description: Large ribosomal subunit, and Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:110_Large_ribosomal_subunit,_and_Structural_constituent_of_ribosome


id: CL:1120
description: Mixed, incl. Protein glycosylation, and Antibiotic resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1120_Mixed,_incl._Protein_glycosylation,_and_Antibiotic_resistance


id: CL:1134
description: Mixed, incl. NlpC/P60 family, and Glycosyl transferase 4-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1134_Mixed,_incl._NlpC/P60_family,_and_Glycosyl_transferase_4-like


id: CL:1148
description: Mixed, incl. Pentose phosphate pathway, and Carbohydrate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1148_Mixed,_incl._Pentose_phosphate_pathway,_and_Carbohydrate_catabolic_process


id: CL:1149
description: Pentose phosphate pathway, and Carbohydrate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1149_Pentose_phosphate_pathway,_and_Carbohydrate_catabolic_process


id: CL:1150
description: Pentose phosphate pathway, and Glycolytic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1150_Pentose_phosphate_pathway,_and_Glycolytic_process


id: CL:1151
description: Pentose phosphate pathway, and Glycolytic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1151_Pentose_phosphate_pathway,_and_Glycolytic_process


id: CL:1152
description: Glycolysis, and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1152_Glycolysis,_and_Pentose_phosphate_pathway


id: CL:1153
description: Glycolysis, and Fructose-bisphosphate aldolase class-II
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1153_Glycolysis,_and_Fructose-bisphosphate_aldolase_class-II


id: CL:1155
description: Glycolysis, and Fructose-1,6-bisphosphate aldolase, class 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1155_Glycolysis,_and_Fructose-1,6-bisphosphate_aldolase,_class_2


id: CL:1167
description: Glycolysis, and Fructose-1,6-bisphosphate aldolase, class 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1167_Glycolysis,_and_Fructose-1,6-bisphosphate_aldolase,_class_2


id: CL:1184
description: Mixed, incl. Transketolase, N-terminal, and Transketolase, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1184_Mixed,_incl._Transketolase,_N-terminal,_and_Transketolase,_C-terminal_domain


id: CL:1197
description: Mixed, incl. Intramolecular transferase activity, phosphotransferases, and SIS domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1197_Mixed,_incl._Intramolecular_transferase_activity,_phosphotransferases,_and_SIS_domain_superfamily


id: CL:1199
description: Phosphoglucosamine mutase activity, and SIS domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1199_Phosphoglucosamine_mutase_activity,_and_SIS_domain_superfamily


id: CL:1218
description: Mixed, incl. Carbohydrate transport, and Inositol catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1218_Mixed,_incl._Carbohydrate_transport,_and_Inositol_catabolic_process


id: CL:1220
description: Mixed, incl. Carbohydrate transport, and Ribokinase/fructokinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1220_Mixed,_incl._Carbohydrate_transport,_and_Ribokinase/fructokinase


id: CL:1243
description: Alditol phosphate metabolic process, and Aquaporin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1243_Alditol_phosphate_metabolic_process,_and_Aquaporin-like


id: CL:1254
description: Mixed, incl. Cold-shock (CSD) domain, and Metalloenzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1254_Mixed,_incl._Cold-shock_(CSD)_domain,_and_Metalloenzyme


id: CL:1265
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1265_Mostly_uncharacterized,_incl._RNA_phosphodiester_bond_hydrolysis,_exonucleolytic,_and_rRNA_methyltransferase_activity

description:
  Mostly uncharacterized, incl. RNA phosphodiester bond hydrolysis, exonucleolytic, and rRNA methyltransferase activity


id: CL:1266
description: Mostly uncharacterized, incl. LSM domain superfamily, and Hydantoinase/oxoprolinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1266_Mostly_uncharacterized,_incl._LSM_domain_superfamily,_and_Hydantoinase/oxoprolinase


id: CL:1269
description: Mixed, incl. LSM domain superfamily, and Hydantoinase/oxoprolinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1269_Mixed,_incl._LSM_domain_superfamily,_and_Hydantoinase/oxoprolinase


id: CL:1287
description: Mixed, incl. K Homology domain, type 1, and Calcineurin-like phosphoesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1287_Mixed,_incl._K_Homology_domain,_type_1,_and_Calcineurin-like_phosphoesterase


id: CL:1289
description: Mixed, incl. K Homology domain, type 1, and rRNA (cytosine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1289_Mixed,_incl._K_Homology_domain,_type_1,_and_rRNA_(cytosine)_methyltransferase_activity


id: CL:1307
description: Mixed, incl. Oxoprolinase family, and Cupin 2, conserved barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1307_Mixed,_incl._Oxoprolinase_family,_and_Cupin_2,_conserved_barrel


id: CL:1308
description: Mixed, incl. Oxoprolinase family, and Nucleus
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1308_Mixed,_incl._Oxoprolinase_family,_and_Nucleus


id: CL:1320
description: Oxoprolinase family, and Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1320_Oxoprolinase_family,_and_Peptidase_M24B,_X-Pro_dipeptidase/aminopeptidase_P,_conserved_site


id: CL:1329
description: Helix-turn-helix XRE-family like proteins, and TrkA-C domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1329_Helix-turn-helix_XRE-family_like_proteins,_and_TrkA-C_domain


id: CL:1343
description: Mixed, incl. Cell division, and Regulation of cell shape
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1343_Mixed,_incl._Cell_division,_and_Regulation_of_cell_shape


id: CL:1345
description: Mixed, incl. Cell division, and Regulation of cell shape
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1345_Mixed,_incl._Cell_division,_and_Regulation_of_cell_shape


id: CL:1346
description: Cell division, and Regulation of cell shape
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1346_Cell_division,_and_Regulation_of_cell_shape


id: CL:1347
description: Cell cycle, and Protein of unknown function DUF881
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1347_Cell_cycle,_and_Protein_of_unknown_function_DUF881


id: CL:1349
description: Cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1349_Cell_shape,_and_Cell_division_site


id: CL:1354
description: Mur ligase, C-terminal, and UDP-glycosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1354_Mur_ligase,_C-terminal,_and_UDP-glycosyltransferase_activity


id: CL:1380
description: Septum formation initiator, and POTRA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1380_Septum_formation_initiator,_and_POTRA_domain


id: CL:1403
description: Mixed, incl. SepF-like superfamily, and Alanine racemase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1403_Mixed,_incl._SepF-like_superfamily,_and_Alanine_racemase,_N-terminal


id: CL:1417
description: Mixed, incl. Cell morphogenesis, and Penicillin-binding Protein dimerisation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1417_Mixed,_incl._Cell_morphogenesis,_and_Penicillin-binding_Protein_dimerisation_domain


id: CL:1418
description: Mixed, incl. Regulation of cell cycle, and MPN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1418_Mixed,_incl._Regulation_of_cell_cycle,_and_MPN_domain


id: CL:1420
description: Mixed, incl. MPN domain, and Nucleotide diphosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1420_Mixed,_incl._MPN_domain,_and_Nucleotide_diphosphatase_activity


id: CL:1437
description: Penicillin-binding Protein dimerisation domain, and Cell shape determining protein MreB
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1437_Penicillin-binding_Protein_dimerisation_domain,_and_Cell_shape_determining_protein_MreB


id: CL:145
description: Mixed, incl. Small ribosomal subunit, and K Homology domain, type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:145_Mixed,_incl._Small_ribosomal_subunit,_and_K_Homology_domain,_type_2


id: CL:1453
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1453_Mixed,_incl._N-acetylmuramoyl-L-alanine_amidase_activity,_and_Serine-type_D-Ala-D-Ala_carboxypeptidase_activity

description:
  Mixed, incl. N-acetylmuramoyl-L-alanine amidase activity, and Serine-type D-Ala-D-Ala carboxypeptidase activity


id: CL:1455
description: N-acetylmuramoyl-L-alanine amidase activity, and Lysin motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1455_N-acetylmuramoyl-L-alanine_amidase_activity,_and_Lysin_motif


id: CL:1486
description: Mixed, incl. Tail specific protease, and Domain of unknown function DUF2179
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1486_Mixed,_incl._Tail_specific_protease,_and_Domain_of_unknown_function_DUF2179


id: CL:1503
description: Mixed, incl. Six-hairpin glycosidase-like superfamily, and Macro domain-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1503_Mixed,_incl._Six-hairpin_glycosidase-like_superfamily,_and_Macro_domain-like


id: CL:1506
description: Mixed, incl. Cadherin-like superfamily, and Six-hairpin glycosidase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1506_Mixed,_incl._Cadherin-like_superfamily,_and_Six-hairpin_glycosidase-like_superfamily


id: CL:1524
description: Mixed, incl. Thiamine metabolic process, and tRNA threonylcarbamoyladenosine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1524_Mixed,_incl._Thiamine_metabolic_process,_and_tRNA_threonylcarbamoyladenosine_modification


id: CL:1525
description: Mixed, incl. Thiamine metabolic process, and 3D domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1525_Mixed,_incl._Thiamine_metabolic_process,_and_3D_domain


id: CL:1527
description: Thiamine metabolic process, and ThiH/NocL/HydG-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1527_Thiamine_metabolic_process,_and_ThiH/NocL/HydG-like


id: CL:1543
description: Mixed, incl. 3D domain, and TatD related DNase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1543_Mixed,_incl._3D_domain,_and_TatD_related_DNase


id: CL:1554
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Metal-dependent hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1554_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Metal-dependent_hydrolase


id: CL:1556
description: tRNA threonylcarbamoyladenosine modification, and N-terminal protein amino acid acetylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1556_tRNA_threonylcarbamoyladenosine_modification,_and_N-terminal_protein_amino_acid_acetylation


id: CL:1566
description: Mixed, incl. Metal-dependent hydrolase, and Glutamine amidotransferase class-I
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1566_Mixed,_incl._Metal-dependent_hydrolase,_and_Glutamine_amidotransferase_class-I


id: CL:1584
description: Generation of precursor metabolites and energy, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1584_Generation_of_precursor_metabolites_and_energy,_and_Nitrogen_metabolism


id: CL:1585
description: Mixed, incl. Electron transport chain, and Glyoxylate and dicarboxylate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1585_Mixed,_incl._Electron_transport_chain,_and_Glyoxylate_and_dicarboxylate_metabolism


id: CL:1586
description: Oxidoreductase activity, acting on NAD(P)H, and Cellular respiration
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1586_Oxidoreductase_activity,_acting_on_NAD(P)H,_and_Cellular_respiration


id: CL:1587
description: Oxidoreductase activity, acting on NAD(P)H, and NuoE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1587_Oxidoreductase_activity,_acting_on_NAD(P)H,_and_NuoE_domain


id: CL:1588
description: Oxidoreductase activity, acting on NAD(P)H, and NuoE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1588_Oxidoreductase_activity,_acting_on_NAD(P)H,_and_NuoE_domain


id: CL:1589
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1589_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor,_and_NuoE_domain

description:
  Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor, and NuoE domain


id: CL:1592
description: Quinone, and Thioredoxin-like [2Fe-2S] ferredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1592_Quinone,_and_Thioredoxin-like_[2Fe-2S]_ferredoxin


id: CL:1595
description: Quinone, and Proton-conducting membrane transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1595_Quinone,_and_Proton-conducting_membrane_transporter


id: CL:1627
description: Mixed, incl. 2Fe-2S iron-sulfur cluster binding domain, and 4Fe-4S domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1627_Mixed,_incl._2Fe-2S_iron-sulfur_cluster_binding_domain,_and_4Fe-4S_domain


id: CL:1629
description: Dihydroprymidine dehydrogenase domain II, and 4Fe-4S domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1629_Dihydroprymidine_dehydrogenase_domain_II,_and_4Fe-4S_domain


id: CL:1650
description: Formate dehydrogenase complex, and NADH dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1650_Formate_dehydrogenase_complex,_and_NADH_dehydrogenase


id: CL:1665
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1665_Mixed,_incl._FAD_dependent_oxidoreductase,_and_2Fe-2S_iron-sulfur_cluster_binding_domain,_N-terminal

description:
  Mixed, incl. FAD dependent oxidoreductase, and 2Fe-2S iron-sulfur cluster binding domain, N-terminal


id: CL:1678
description: Cellular respiration, and Aldehyde ferredoxin oxidoreductase, domain 3
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1678_Cellular_respiration,_and_Aldehyde_ferredoxin_oxidoreductase,_domain_3


id: CL:1680
description: Mixed, incl. NrfD family, and Molybdopterin cofactor binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1680_Mixed,_incl._NrfD_family,_and_Molybdopterin_cofactor_binding


id: CL:1682
description: Molybdopterin cofactor binding, and NrfD family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1682_Molybdopterin_cofactor_binding,_and_NrfD_family


id: CL:1706
description: Aldehyde ferredoxin oxidoreductase, domain 3, and Nitrotoluene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1706_Aldehyde_ferredoxin_oxidoreductase,_domain_3,_and_Nitrotoluene_degradation


id: CL:1715
description: Mixed, incl. Glyoxylate and dicarboxylate metabolism, and Glutamate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1715_Mixed,_incl._Glyoxylate_and_dicarboxylate_metabolism,_and_Glutamate_biosynthetic_process


id: CL:1718
description: Glycine catabolic process, and Glutamine synthetase, beta-Grasp domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1718_Glycine_catabolic_process,_and_Glutamine_synthetase,_beta-Grasp_domain


id: CL:1719
description: Glutamine synthetase, beta-Grasp domain, and Glutamate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1719_Glutamine_synthetase,_beta-Grasp_domain,_and_Glutamate_biosynthetic_process


id: CL:1745
description: Mixed, incl. Redox-active center, and Antibiotic metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1745_Mixed,_incl._Redox-active_center,_and_Antibiotic_metabolic_process


id: CL:1746
description: Mixed, incl. Antibiotic metabolic process, and Rhodanese-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1746_Mixed,_incl._Antibiotic_metabolic_process,_and_Rhodanese-like_domain


id: CL:1757
description: Redox-active center, and Response to superoxide
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1757_Redox-active_center,_and_Response_to_superoxide


id: CL:1766
description: Mixed, incl. Prismane-like superfamily, and One-carbon metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1766_Mixed,_incl._Prismane-like_superfamily,_and_One-carbon_metabolic_process


id: CL:1767
description: Mixed, incl. CO dehydrogenase, alpha-bundle, and Tetrahydrofolate interconversion
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1767_Mixed,_incl._CO_dehydrogenase,_alpha-bundle,_and_Tetrahydrofolate_interconversion


id: CL:177
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:177_Structural_constituent_of_ribosome


id: CL:1770
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1770_CO_dehydrogenase,_alpha-bundle,_and_Nickel_insertion_ATPase/GTPase_(CO_dehydrogenase_maturation_factor),_CooC_type

description:
  CO dehydrogenase, alpha-bundle, and Nickel insertion ATPase/GTPase (CO dehydrogenase maturation factor), CooC type


id: CL:178
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:178_Structural_constituent_of_ribosome


id: CL:1792
description: Mixed, incl. Prismane, alpha-bundle, and Electron transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1792_Mixed,_incl._Prismane,_alpha-bundle,_and_Electron_transport


id: CL:1809
description: Mixed, incl. Citrate cycle (TCA cycle), and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1809_Mixed,_incl._Citrate_cycle_(TCA_cycle),_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:1810
description: Citrate cycle (TCA cycle), and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1810_Citrate_cycle_(TCA_cycle),_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:1811
description: Citrate cycle (TCA cycle), and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1811_Citrate_cycle_(TCA_cycle),_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:1812
description: Citrate cycle (TCA cycle), and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1812_Citrate_cycle_(TCA_cycle),_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:1826
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1826_Mixed,_incl._2-oxoacid:acceptor_oxidoreductase,_gamma_subunit,_pyruvate/2-ketoisovalerate,_and_Oxalate_metabolic_process

description:
  Mixed, incl. 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate, and Oxalate metabolic process


id: CL:183
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:183_Structural_constituent_of_ribosome


id: CL:1842
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1842_Mixed,_incl._Metallochaperone_activity,_and_2-oxoacid:acceptor_oxidoreductase,_gamma_subunit,_pyruvate/2-ketoisovalerate

description:
  Mixed, incl. Metallochaperone activity, and 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate


id: CL:185
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:185_Structural_constituent_of_ribosome


id: CL:1852
description: Tricarboxylic acid cycle, and Malate dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1852_Tricarboxylic_acid_cycle,_and_Malate_dehydrogenase_activity


id: CL:1874
description: Branched-chain amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1874_Branched-chain_amino_acid_metabolic_process


id: CL:1909
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1909_Mixed,_incl._D-isomer_specific_2-hydroxyacid_dehydrogenase,_catalytic_domain,_and_Valine,_leucine_and_isoleucine_degradation

description:
  Mixed, incl. D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain, and Valine, leucine and isoleucine degradation


id: CL:1911
description: D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain, and Glycolate oxidase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1911_D-isomer_specific_2-hydroxyacid_dehydrogenase,_catalytic_domain,_and_Glycolate_oxidase_complex


id: CL:1930
description: Glycine radical, and Organic radical enzyme activase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1930_Glycine_radical,_and_Organic_radical_enzyme_activase


id: CL:1941
description: Mixed, incl. Fatty acid metabolic process, and AMP-binding, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1941_Mixed,_incl._Fatty_acid_metabolic_process,_and_AMP-binding,_conserved_site


id: CL:1942
description: Mixed, incl. Fatty acid metabolic process, and Taurine and hypotaurine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1942_Mixed,_incl._Fatty_acid_metabolic_process,_and_Taurine_and_hypotaurine_metabolism


id: CL:1944
description: Fatty acid metabolism, and Single hybrid motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1944_Fatty_acid_metabolism,_and_Single_hybrid_motif


id: CL:1947
description: Fatty acid synthase activity, and Dioxygenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1947_Fatty_acid_synthase_activity,_and_Dioxygenase_activity


id: CL:1962
description: CoA carboxylase activity, and Single hybrid motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1962_CoA_carboxylase_activity,_and_Single_hybrid_motif


id: CL:1977
description: Mixed, incl. acetyl-CoA metabolic process, and Phosphate acetyl/butyryltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1977_Mixed,_incl._acetyl-CoA_metabolic_process,_and_Phosphate_acetyl/butyryltransferase


id: CL:1980
description: Taurine and hypotaurine metabolism, and Phosphate acetyl/butyryltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:1980_Taurine_and_hypotaurine_metabolism,_and_Phosphate_acetyl/butyryltransferase


id: CL:2004
description: Superoxide dismutase activity, and NAD+ binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2004_Superoxide_dismutase_activity,_and_NAD+_binding


id: CL:201
description: L28p-like, and Zinc-binding ribosomal protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:201_L28p-like,_and_Zinc-binding_ribosomal_protein


id: CL:2020
description: Mixed, incl. Electron transfer flavoprotein domain, and Glycolate oxidase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2020_Mixed,_incl._Electron_transfer_flavoprotein_domain,_and_Glycolate_oxidase_complex


id: CL:2022
description: Electron transfer flavoprotein domain, and Glycolate oxidase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2022_Electron_transfer_flavoprotein_domain,_and_Glycolate_oxidase_complex


id: CL:2043
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2043_Mixed,_incl._4Fe-4S_ferredoxin,_iron-sulphur_binding,_conserved_site,_and_Serine-type_endopeptidase_activity

description:
  Mixed, incl. 4Fe-4S ferredoxin, iron-sulphur binding, conserved site, and Serine-type endopeptidase activity


id: CL:2045
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2045_Mixed,_incl._4Fe-4S_ferredoxin,_iron-sulphur_binding,_conserved_site,_and_Sulfite_exporter_TauE/SafE

description:
  Mixed, incl. 4Fe-4S ferredoxin, iron-sulphur binding, conserved site, and Sulfite exporter TauE/SafE


id: CL:2047
description: Mixed, incl. Sulfite exporter TauE/SafE, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2047_Mixed,_incl._Sulfite_exporter_TauE/SafE,_and_Sulfur_metabolism


id: CL:2049
description: Mixed, incl. Sulfite exporter TauE/SafE, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2049_Mixed,_incl._Sulfite_exporter_TauE/SafE,_and_Sulfur_metabolism


id: CL:2051
description: Mixed, incl. Nitrite and sulphite reductase 4Fe-4S domain, and NarG-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2051_Mixed,_incl._Nitrite_and_sulphite_reductase_4Fe-4S_domain,_and_NarG-like_domain


id: CL:2053
description: Nitrite and sulphite reductase 4Fe-4S domain, and NarG-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2053_Nitrite_and_sulphite_reductase_4Fe-4S_domain,_and_NarG-like_domain


id: CL:2076
description: Sulfite exporter TauE/SafE, and Putative zinc- or iron-chelating domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2076_Sulfite_exporter_TauE/SafE,_and_Putative_zinc-_or_iron-chelating_domain


id: CL:2103
description: Methane metabolism, and LUD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2103_Methane_metabolism,_and_LUD_domain


id: CL:2104
description: Methane metabolism, and Oxidoreductase FAD-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2104_Methane_metabolism,_and_Oxidoreductase_FAD-binding_domain


id: CL:2106
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2106_Mixed,_incl._H(2):CoB-CoM_heterodisulfide,ferredoxin_reductase_subunit_A-like,_and_Methyl-viologen-reducing_hydrogenase,_delta_subunit

description:
  Mixed, incl. H(2):CoB-CoM heterodisulfide,ferredoxin reductase subunit A-like, and Methyl-viologen-reducing hydrogenase, delta subunit


id: CL:2108
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2108_Mixed,_incl._Methyl-viologen-reducing_hydrogenase,_delta_subunit,_and_Pyridine_nucleotide-disulphide_oxidoreductase

description:
  Mixed, incl. Methyl-viologen-reducing hydrogenase, delta subunit, and Pyridine nucleotide-disulphide oxidoreductase


id: CL:2130
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2130_Mixed,_incl._Oxidoreductase_FAD-binding_domain,_and_Flavoprotein_pyridine_nucleotide_cytochrome_reductase-like,_FAD-binding_domain

description:
  Mixed, incl. Oxidoreductase FAD-binding domain, and Flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain


id: CL:2141
description: LUD domain, and Lactate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2141_LUD_domain,_and_Lactate_transport


id: CL:2155
description: Mixed, incl. ATP-cone domain, and Response to cold
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2155_Mixed,_incl._ATP-cone_domain,_and_Response_to_cold


id: CL:2164
description: Mixed, incl. CoA-ligase activity, and Indolepyruvate oxidoreductase subunit IorA
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2164_Mixed,_incl._CoA-ligase_activity,_and_Indolepyruvate_oxidoreductase_subunit_IorA


id: CL:2166
description: Mixed, incl. CoA-ligase activity, and Indolepyruvate oxidoreductase subunit IorA
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2166_Mixed,_incl._CoA-ligase_activity,_and_Indolepyruvate_oxidoreductase_subunit_IorA


id: CL:2184
description: Mixed, incl. Spore cortex-lytic enzyme SleB, and Winged helix-turn-helix DNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2184_Mixed,_incl._Spore_cortex-lytic_enzyme_SleB,_and_Winged_helix-turn-helix_DNA-binding


id: CL:219
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:219_Translation_elongation_factor_EF1B/ribosomal_protein_S6,_and_Ribosomal_protein_S5_domain_2-type_fold,_subgroup

description:
  Translation elongation factor EF1B/ribosomal protein S6, and Ribosomal protein S5 domain 2-type fold, subgroup


id: CL:2193
description: Cellular amino acid biosynthetic process, and Phenylalanine, tyrosine and tryptophan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2193_Cellular_amino_acid_biosynthetic_process,_and_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis


id: CL:2195
description: Alpha-amino acid biosynthetic process, and Polyamine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2195_Alpha-amino_acid_biosynthetic_process,_and_Polyamine_biosynthesis


id: CL:2196
description: Mixed, incl. Arginine metabolic process, and Proline biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2196_Mixed,_incl._Arginine_metabolic_process,_and_Proline_biosynthesis


id: CL:2197
description: Mixed, incl. Polyamine biosynthesis, and Carbon-nitrogen hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2197_Mixed,_incl._Polyamine_biosynthesis,_and_Carbon-nitrogen_hydrolase


id: CL:2199
description: Polyamine biosynthesis, and Ureohydrolase domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2199_Polyamine_biosynthesis,_and_Ureohydrolase_domain_superfamily


id: CL:2209
description: Carbon-nitrogen hydrolase, and Novobiocin biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2209_Carbon-nitrogen_hydrolase,_and_Novobiocin_biosynthesis


id: CL:2220
description: Arginine metabolic process, and Proline biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2220_Arginine_metabolic_process,_and_Proline_biosynthesis


id: CL:2243
description: Aspartate family amino acid biosynthetic process, and Cysteine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2243_Aspartate_family_amino_acid_biosynthetic_process,_and_Cysteine_metabolic_process


id: CL:2244
description: Sulfur amino acid metabolic process, and GHMP kinases C terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2244_Sulfur_amino_acid_metabolic_process,_and_GHMP_kinases_C_terminal


id: CL:2246
description: Homoserine metabolic process, and Methionine synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2246_Homoserine_metabolic_process,_and_Methionine_synthase_activity


id: CL:2268
description: Lysine biosynthesis, and ACT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2268_Lysine_biosynthesis,_and_ACT_domain


id: CL:2287
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Histidine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2287_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Histidine_biosynthesis


id: CL:2290
description: Aromatic amino acid family biosynthetic process, and ADC synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2290_Aromatic_amino_acid_family_biosynthetic_process,_and_ADC_synthase


id: CL:2292
description: Chorismate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2292_Chorismate_biosynthetic_process


id: CL:2312
description: Tryptophan biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2312_Tryptophan_biosynthetic_process


id: CL:2333
description: Histidine biosynthesis, and Peptidoglycan transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2333_Histidine_biosynthesis,_and_Peptidoglycan_transport


id: CL:2368
description: Mixed, incl. Nitrogen fixation, and CobQ/CobB/MinD/ParA nucleotide binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2368_Mixed,_incl._Nitrogen_fixation,_and_CobQ/CobB/MinD/ParA_nucleotide_binding_domain


id: CL:2371
description: MTH1175 domain, and CobQ/CobB/MinD/ParA nucleotide binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2371_MTH1175_domain,_and_CobQ/CobB/MinD/ParA_nucleotide_binding_domain


id: CL:2384
description: Mixed, incl. NIL domain, and Methionine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2384_Mixed,_incl._NIL_domain,_and_Methionine_metabolic_process


id: CL:2393
description: Mixed, incl. Iron-type alcohol dehydrogenase-like, and Bacterial microcompartment
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2393_Mixed,_incl._Iron-type_alcohol_dehydrogenase-like,_and_Bacterial_microcompartment


id: CL:2394
description: Mixed, incl. Iron-type alcohol dehydrogenase-like, and Bacterial microcompartment
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2394_Mixed,_incl._Iron-type_alcohol_dehydrogenase-like,_and_Bacterial_microcompartment


id: CL:2397
description: Bacterial microcompartment, and Alcohol dehydrogenase, iron-type, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2397_Bacterial_microcompartment,_and_Alcohol_dehydrogenase,_iron-type,_conserved_site


id: CL:2400
description: Ethanolamine metabolic process, and Pantothenate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2400_Ethanolamine_metabolic_process,_and_Pantothenate_catabolic_process


id: CL:2428
description: Mixed, incl. Aldo/keto reductase family, and L-threonine catabolic process to glycine
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2428_Mixed,_incl._Aldo/keto_reductase_family,_and_L-threonine_catabolic_process_to_glycine


id: CL:2430
description: Aldo/keto reductase family, and Flavodoxin/nitric oxide synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2430_Aldo/keto_reductase_family,_and_Flavodoxin/nitric_oxide_synthase


id: CL:2442
description: L-threonine catabolic process to glycine, and Naphthalene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2442_L-threonine_catabolic_process_to_glycine,_and_Naphthalene_degradation


id: CL:2451
description: HTH-like domain, and Transposase IS3/IS911family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2451_HTH-like_domain,_and_Transposase_IS3/IS911family


id: CL:2462
description: Mostly uncharacterized, incl. Anaerobic glutamate catabolic process, and Queuosine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2462_Mostly_uncharacterized,_incl._Anaerobic_glutamate_catabolic_process,_and_Queuosine_biosynthesis


id: CL:2463
description: Mixed, incl. Anaerobic glutamate catabolic process, and Queuosine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2463_Mixed,_incl._Anaerobic_glutamate_catabolic_process,_and_Queuosine_biosynthesis


id: CL:2464
description: Mixed, incl. Anaerobic glutamate catabolic process, and Terpene metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2464_Mixed,_incl._Anaerobic_glutamate_catabolic_process,_and_Terpene_metabolic_process


id: CL:2465
description: Mixed, incl. Glutamate catabolic process, and Terpene metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2465_Mixed,_incl._Glutamate_catabolic_process,_and_Terpene_metabolic_process


id: CL:2467
description: Glutamate catabolic process, and threonyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2467_Glutamate_catabolic_process,_and_threonyl-tRNA_aminoacylation


id: CL:2479
description: Mixed, incl. rRNA catabolic process, and tRNA 3-trailer cleavage
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2479_Mixed,_incl._rRNA_catabolic_process,_and_tRNA_3-trailer_cleavage


id: CL:2492
description: CoA enzyme activase uncharacterised domain (DUF2229), and CoA enzyme activase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2492_CoA_enzyme_activase_uncharacterised_domain_(DUF2229),_and_CoA_enzyme_activase


id: CL:2509
description: Mixed, incl. Queuosine biosynthesis, and GTP cyclohydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2509_Mixed,_incl._Queuosine_biosynthesis,_and_GTP_cyclohydrolase_activity


id: CL:2512
description: Queuosine biosynthesis, and GTP cyclohydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2512_Queuosine_biosynthesis,_and_GTP_cyclohydrolase_activity


id: CL:253
description: Mixed, incl. tRNA pseudouridine synthesis, and Ribosomal protein L7Ae/L30e/S12e/Gadd45
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:253_Mixed,_incl._tRNA_pseudouridine_synthesis,_and_Ribosomal_protein_L7Ae/L30e/S12e/Gadd45


id: CL:2531
description: Mixed, incl. Heparin binding, and Protein kinase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2531_Mixed,_incl._Heparin_binding,_and_Protein_kinase_domain


id: CL:2545
description: Mixed, incl. Sulfur relay system, and Molybdenum
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2545_Mixed,_incl._Sulfur_relay_system,_and_Molybdenum


id: CL:2546
description: Mixed, incl. Prosthetic group metabolic process, and PBP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2546_Mixed,_incl._Prosthetic_group_metabolic_process,_and_PBP_domain


id: CL:2547
description: Mixed, incl. Prosthetic group metabolic process, and PBP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2547_Mixed,_incl._Prosthetic_group_metabolic_process,_and_PBP_domain


id: CL:2549
description: Prosthetic group metabolic process, and PBP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2549_Prosthetic_group_metabolic_process,_and_PBP_domain


id: CL:2552
description: Prosthetic group metabolic process, and MoeA, C-terminal, domain IV
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2552_Prosthetic_group_metabolic_process,_and_MoeA,_C-terminal,_domain_IV


id: CL:2554
description: Molybdenum cofactor biosynthesis, and Molybdenum ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2554_Molybdenum_cofactor_biosynthesis,_and_Molybdenum_ion_binding


id: CL:2577
description: PBP domain, and Carbohydrate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2577_PBP_domain,_and_Carbohydrate_transport


id: CL:2596
description: Mixed, incl. Dioxin degradation, and Nickel cation transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2596_Mixed,_incl._Dioxin_degradation,_and_Nickel_cation_transport


id: CL:2600
description: Dioxin degradation, and Molybdopterin molybdotransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2600_Dioxin_degradation,_and_Molybdopterin_molybdotransferase_activity


id: CL:2615
description: Mixed, incl. Iron-sulfur cluster assembly, and tRNA wobble uridine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2615_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_tRNA_wobble_uridine_modification


id: CL:2616
description: Iron-sulfur cluster assembly, and Transcription regulator Rrf2
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2616_Iron-sulfur_cluster_assembly,_and_Transcription_regulator_Rrf2


id: CL:2618
description: Cysteine desulfurase, and NifU-like N terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2618_Cysteine_desulfurase,_and_NifU-like_N_terminal_domain


id: CL:2638
description: tRNA wobble uridine modification, and Selenium
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2638_tRNA_wobble_uridine_modification,_and_Selenium


id: CL:2654
description: Phosphate ion transport, and Cytochrome complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2654_Phosphate_ion_transport,_and_Cytochrome_complex


id: CL:2681
description: Mixed, incl. Cell differentiation, and Transmembrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2681_Mixed,_incl._Cell_differentiation,_and_Transmembrane


id: CL:2682
description: Mixed, incl. Cell differentiation, and Transmembrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2682_Mixed,_incl._Cell_differentiation,_and_Transmembrane


id: CL:2683
description: Mixed, incl. Cell differentiation, and Potassium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2683_Mixed,_incl._Cell_differentiation,_and_Potassium_ion_transport


id: CL:2684
description: Cell differentiation, and Membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2684_Cell_differentiation,_and_Membrane


id: CL:2685
description: Mixed, incl. Cell differentiation, and Protein of unknown function DUF1657
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2685_Mixed,_incl._Cell_differentiation,_and_Protein_of_unknown_function_DUF1657


id: CL:2686
description: Cell differentiation, and Protein of unknown function DUF1657
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2686_Cell_differentiation,_and_Protein_of_unknown_function_DUF1657


id: CL:2688
description: Cell differentiation, and Protein of unknown function DUF1657
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2688_Cell_differentiation,_and_Protein_of_unknown_function_DUF1657


id: CL:2689
description: Cell differentiation, and Protein of unknown function DUF1657
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2689_Cell_differentiation,_and_Protein_of_unknown_function_DUF1657


id: CL:2690
description: Sporulation, and Protein of unknown function DUF1657
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2690_Sporulation,_and_Protein_of_unknown_function_DUF1657


id: CL:2691
description: Sporulation, and Protein of unknown function DUF1657
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2691_Sporulation,_and_Protein_of_unknown_function_DUF1657


id: CL:2698
description: Mixed, incl. Sporulation, and RNA polymerase sigma-70 region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2698_Mixed,_incl._Sporulation,_and_RNA_polymerase_sigma-70_region_4


id: CL:2699
description: Mixed, incl. Sporulation, and RNA polymerase sigma-70 region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2699_Mixed,_incl._Sporulation,_and_RNA_polymerase_sigma-70_region_4


id: CL:2702
description: Mixed, incl. Sporulation, and Sporulation stage II, protein P
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2702_Mixed,_incl._Sporulation,_and_Sporulation_stage_II,_protein_P


id: CL:2723
description: SpoVA, and Stage V sporulation AD
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2723_SpoVA,_and_Stage_V_sporulation_AD


id: CL:2738
description: Stage III sporulation protein AC/AD family, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2738_Stage_III_sporulation_protein_AC/AD_family,_and_Sporulation


id: CL:2741
description: Stage III sporulation protein AC/AD family, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2741_Stage_III_sporulation_protein_AC/AD_family,_and_Sporulation


id: CL:2773
description: Mixed, incl. Protein of unknown function DUF1657, and SpoVA
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2773_Mixed,_incl._Protein_of_unknown_function_DUF1657,_and_SpoVA


id: CL:2777
description: Protein of unknown function DUF1657, and SpoVA
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2777_Protein_of_unknown_function_DUF1657,_and_SpoVA


id: CL:2792
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2792_Mixed,_incl._Small,_acid-soluble_spore_proteins,_alpha/beta_type,_and_Uncharacterized_membrane_protein_YkvI

description:
  Mixed, incl. Small, acid-soluble spore proteins, alpha/beta type, and Uncharacterized membrane protein YkvI


id: CL:2806
description: Spore germination, and Transmembrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2806_Spore_germination,_and_Transmembrane


id: CL:2818
description: Spore germination, and Transmembrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2818_Spore_germination,_and_Transmembrane


id: CL:2834
description: Mixed, incl. Ribosome biogenesis, and YabP family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2834_Mixed,_incl._Ribosome_biogenesis,_and_YabP_family


id: CL:2836
description: Mixed, incl. Ribosome biogenesis, and YabP family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2836_Mixed,_incl._Ribosome_biogenesis,_and_YabP_family


id: CL:2857
description: Mostly uncharacterized, incl. Chorismate mutase activity, and rRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2857_Mostly_uncharacterized,_incl._Chorismate_mutase_activity,_and_rRNA_pseudouridine_synthesis


id: CL:2859
description: Mixed, incl. rRNA pseudouridine synthesis, and Nucleoside recognition
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2859_Mixed,_incl._rRNA_pseudouridine_synthesis,_and_Nucleoside_recognition


id: CL:2871
description: Mixed, incl. Chorismate mutase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2871_Mixed,_incl._Chorismate_mutase_activity


id: CL:2880
description: Mostly uncharacterized, incl. Phospholipid metabolism, and Metal ion homeostasis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2880_Mostly_uncharacterized,_incl._Phospholipid_metabolism,_and_Metal_ion_homeostasis


id: CL:2881
description: Mostly uncharacterized, incl. Phospholipid metabolism, and PDZ domain 6
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2881_Mostly_uncharacterized,_incl._Phospholipid_metabolism,_and_PDZ_domain_6


id: CL:2882
description: Mostly uncharacterized, incl. Phospholipid metabolism, and PDZ domain 6
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2882_Mostly_uncharacterized,_incl._Phospholipid_metabolism,_and_PDZ_domain_6


id: CL:2883
description: Mostly uncharacterized, incl. Glutathione metabolism, and Transition metal ion homeostasis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2883_Mostly_uncharacterized,_incl._Glutathione_metabolism,_and_Transition_metal_ion_homeostasis


id: CL:2884
description: Mostly uncharacterized, incl. Stage II sporulation protein, and Sporulation stage II, protein P
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2884_Mostly_uncharacterized,_incl._Stage_II_sporulation_protein,_and_Sporulation_stage_II,_protein_P


id: CL:2885
description: Mixed, incl. Stage II sporulation protein, and Sporulation stage II, protein P
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2885_Mixed,_incl._Stage_II_sporulation_protein,_and_Sporulation_stage_II,_protein_P


id: CL:2900
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2900_Mixed,_incl._Mycobacterial_4_TMS_phage_holin,_superfamily_IV,_and_Small_acid-soluble_spore_protein,_alpha/beta-type,_conserved_site

description:
  Mixed, incl. Mycobacterial 4 TMS phage holin, superfamily IV, and Small acid-soluble spore protein, alpha/beta-type, conserved site


id: CL:2912
description: Mixed, incl. Glycosyl transferase family 4, and Glutathione metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2912_Mixed,_incl._Glycosyl_transferase_family_4,_and_Glutathione_metabolic_process


id: CL:2925
description: Phospholipid metabolism, and Nucleoside monophosphate phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2925_Phospholipid_metabolism,_and_Nucleoside_monophosphate_phosphorylation


id: CL:2939
description: Mixed, incl. Stage V sporulation protein G, and MobA-like NTP transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2939_Mixed,_incl._Stage_V_sporulation_protein_G,_and_MobA-like_NTP_transferase


id: CL:2948
description: Mixed, incl. DNA catabolic process, and Alkaline shock protein Asp23
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2948_Mixed,_incl._DNA_catabolic_process,_and_Alkaline_shock_protein_Asp23


id: CL:2950
description: DNA catabolic process, and NusB family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2950_DNA_catabolic_process,_and_NusB_family


id: CL:2964
description: Mixed, incl. Host cell, and MraW methylase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2964_Mixed,_incl._Host_cell,_and_MraW_methylase_family


id: CL:297
description: RNA polymerase, and Helicase/UvrB, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:297_RNA_polymerase,_and_Helicase/UvrB,_N-terminal


id: CL:2975
description: Mixed, incl. Potassium ion transport, and Virion
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2975_Mixed,_incl._Potassium_ion_transport,_and_Virion


id: CL:2978
description: Virion, and Potassium ion transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:2978_Virion,_and_Potassium_ion_transmembrane_transport


id: CL:3000
description: Mixed, incl. YmfJ/YflH superfamily, and Protein of unknown function (DUF441)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3000_Mixed,_incl._YmfJ/YflH_superfamily,_and_Protein_of_unknown_function_(DUF441)


id: CL:3001
description: Mixed, incl. YmfJ/YflH superfamily, and Protein of unknown function (DUF441)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3001_Mixed,_incl._YmfJ/YflH_superfamily,_and_Protein_of_unknown_function_(DUF441)


id: CL:3004
description: YmfJ/YflH superfamily, and Protein of unknown function (DUF441)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3004_YmfJ/YflH_superfamily,_and_Protein_of_unknown_function_(DUF441)


id: CL:3024
description: Mixed, incl. Peptidase M41, and Methylthiotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3024_Mixed,_incl._Peptidase_M41,_and_Methylthiotransferase


id: CL:3040
description: Mixed, incl. SipL, SPOCS domain, and YbaB/EbfC DNA-binding family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3040_Mixed,_incl._SipL,_SPOCS_domain,_and_YbaB/EbfC_DNA-binding_family


id: CL:3041
description: SipL, SPOCS domain, and YbaB/EbfC DNA-binding family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3041_SipL,_SPOCS_domain,_and_YbaB/EbfC_DNA-binding_family


id: CL:3052
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3052_Mixed,_incl._Peptidase_S8,_subtilisin,_Asp-active_site,_and_Bacterial-type_flagellum-dependent_swarming_motility

description:
  Mixed, incl. Peptidase S8, subtilisin, Asp-active site, and Bacterial-type flagellum-dependent swarming motility


id: CL:3068
description: Mostly uncharacterized, incl. Tail specific protease, and LSM domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3068_Mostly_uncharacterized,_incl._Tail_specific_protease,_and_LSM_domain_superfamily


id: CL:3069
description: Mixed, incl. LSM domain superfamily, and MarR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3069_Mixed,_incl._LSM_domain_superfamily,_and_MarR-type_HTH_domain


id: CL:3082
description: Mixed, incl. Tail specific protease, and Zinc finger, FPG/IleRS-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3082_Mixed,_incl._Tail_specific_protease,_and_Zinc_finger,_FPG/IleRS-type


id: CL:3096
description: Mixed, incl. Signal, and Membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3096_Mixed,_incl._Signal,_and_Membrane


id: CL:3097
description: Mixed, incl. Signal, and Hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3097_Mixed,_incl._Signal,_and_Hydrolase_activity


id: CL:3098
description: Mixed, incl. Signal, and Hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3098_Mixed,_incl._Signal,_and_Hydrolase_activity


id: CL:3099
description: Mixed, incl. Signal, and Hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3099_Mixed,_incl._Signal,_and_Hydrolase_activity


id: CL:3100
description: Mixed, incl. Signal, and Phosphoric ester hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3100_Mixed,_incl._Signal,_and_Phosphoric_ester_hydrolase_activity


id: CL:3101
description: Mixed, incl. Signal, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3101_Mixed,_incl._Signal,_and_Coiled_coil


id: CL:3103
description: Mixed, incl. Signal, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3103_Mixed,_incl._Signal,_and_Coiled_coil


id: CL:3104
description: Mixed, incl. Signal, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3104_Mixed,_incl._Signal,_and_Coiled_coil


id: CL:3105
description: Mixed, incl. Signal, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3105_Mixed,_incl._Signal,_and_Coiled_coil


id: CL:3106
description: Mixed, incl. Signal, and Porphyrin and chlorophyll metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3106_Mixed,_incl._Signal,_and_Porphyrin_and_chlorophyll_metabolism


id: CL:3107
description: Mixed, incl. Copper amine oxidase-like, N-terminal domain superfamily, and S-layer homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3107_Mixed,_incl._Copper_amine_oxidase-like,_N-terminal_domain_superfamily,_and_S-layer_homology_domain


id: CL:3108
description: Mostly uncharacterized, incl. Flagellar assembly protein A, and Domain of unknown function DUF6385
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3108_Mostly_uncharacterized,_incl._Flagellar_assembly_protein_A,_and_Domain_of_unknown_function_DUF6385


id: CL:3109
description: Mostly uncharacterized, incl. Flagellar assembly protein A, and Domain of unknown function DUF6385
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3109_Mostly_uncharacterized,_incl._Flagellar_assembly_protein_A,_and_Domain_of_unknown_function_DUF6385


id: CL:3111
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3111_Mostly_uncharacterized,_incl._Domain_of_unknown_function_DUF6385,_and_PD-(D/E)XK_nuclease_transposase_sub-family

description:
  Mostly uncharacterized, incl. Domain of unknown function DUF6385, and PD-(D/E)XK nuclease transposase sub-family


id: CL:3115
description: Mostly uncharacterized, incl. Ion channel, and NAD+ binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3115_Mostly_uncharacterized,_incl._Ion_channel,_and_NAD+_binding


id: CL:3117
description: Mostly uncharacterized, incl. Ion channel, and Armadillo-type fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3117_Mostly_uncharacterized,_incl._Ion_channel,_and_Armadillo-type_fold


id: CL:3119
description: Mixed, incl. Ion channel, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3119_Mixed,_incl._Ion_channel,_and_AAA_domain


id: CL:313
description: Mixed, incl. Cyclophilin-like domain superfamily, and ATP-dependent activity, acting on RNA
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:313_Mixed,_incl._Cyclophilin-like_domain_superfamily,_and_ATP-dependent_activity,_acting_on_RNA


id: CL:3152
description: PD-(D/E)XK nuclease transposase sub-family, and S-layer homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3152_PD-(D/E)XK_nuclease_transposase_sub-family,_and_S-layer_homology_domain


id: CL:3174
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3174_Na+-translocating_membrane_potential-generating_system_MpsC,_and_Type_I_phosphodiesterase_/_nucleotide_pyrophosphatase

description:
  Na+-translocating membrane potential-generating system MpsC, and Type I phosphodiesterase / nucleotide pyrophosphatase


id: CL:3183
description: Copper amine oxidase-like, N-terminal domain superfamily, and S-layer homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3183_Copper_amine_oxidase-like,_N-terminal_domain_superfamily,_and_S-layer_homology_domain


id: CL:3184
description: Copper amine oxidase-like, N-terminal domain superfamily, and S-layer homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3184_Copper_amine_oxidase-like,_N-terminal_domain_superfamily,_and_S-layer_homology_domain


id: CL:3186
description: Copper amine oxidase-like, N-terminal domain superfamily, and S-layer homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3186_Copper_amine_oxidase-like,_N-terminal_domain_superfamily,_and_S-layer_homology_domain


id: CL:3203
description: S-layer homology domain, and Domain of unknown function DUF4349
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3203_S-layer_homology_domain,_and_Domain_of_unknown_function_DUF4349


id: CL:3215
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3215_Mixed,_incl._Phosphotransferase_activity,_for_other_substituted_phosphate_groups,_and_Disulfide_oxidoreductase_activity

description:
  Mixed, incl. Phosphotransferase activity, for other substituted phosphate groups, and Disulfide oxidoreductase activity


id: CL:3228
description: Mostly uncharacterized, incl. Response to biotic stimulus, and Protein of unknown function DUF2680
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3228_Mostly_uncharacterized,_incl._Response_to_biotic_stimulus,_and_Protein_of_unknown_function_DUF2680


id: CL:3229
description: Mostly uncharacterized, incl. Protein of unknown function DUF2680, and Cytolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3229_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF2680,_and_Cytolysis


id: CL:3231
description: Mixed, incl. Response to biotic stimulus, and UBA-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3231_Mixed,_incl._Response_to_biotic_stimulus,_and_UBA-like_superfamily


id: CL:3233
description: Mixed, incl. Host cell, and Response to host
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3233_Mixed,_incl._Host_cell,_and_Response_to_host


id: CL:3245
description: Mixed, incl. UBA-like superfamily, and Protein of unknown function DUF2680
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3245_Mixed,_incl._UBA-like_superfamily,_and_Protein_of_unknown_function_DUF2680


id: CL:326
description: K homology RNA-binding domain, and De novo CTP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:326_K_homology_RNA-binding_domain,_and_De_novo_CTP_biosynthetic_process


id: CL:3260
description: Mixed, incl. Ribonucleoside-triphosphate reductase, anaerobic, and Immunoglobulin-like fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3260_Mixed,_incl._Ribonucleoside-triphosphate_reductase,_anaerobic,_and_Immunoglobulin-like_fold


id: CL:3275
description: Mostly uncharacterized, incl. Response to metal ion, and Nickel cation transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3275_Mostly_uncharacterized,_incl._Response_to_metal_ion,_and_Nickel_cation_transport


id: CL:3278
description: Mixed, incl. Response to metal ion, and Type I phosphodiesterase / nucleotide pyrophosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3278_Mixed,_incl._Response_to_metal_ion,_and_Type_I_phosphodiesterase_/_nucleotide_pyrophosphatase


id: CL:3294
description: Mixed, incl. Protein of unknown function (DUF3792), and DNA strand elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3294_Mixed,_incl._Protein_of_unknown_function_(DUF3792),_and_DNA_strand_elongation


id: CL:3309
description: Mixed, incl. NAD(P)-binding Rossmann-like domain, and Transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3309_Mixed,_incl._NAD(P)-binding_Rossmann-like_domain,_and_Transposase_sub-family


id: CL:3320
description: Mixed, incl. Uncharacterised ArCR, COG2043, and Bacterial fructose-1,6-bisphosphatase, glpX-encoded
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3320_Mixed,_incl._Uncharacterised_ArCR,_COG2043,_and_Bacterial_fructose-1,6-bisphosphatase,_glpX-encoded


id: CL:3322
description: Mixed, incl. RNA polymerase sigma-70 like, and Protein import
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3322_Mixed,_incl._RNA_polymerase_sigma-70_like,_and_Protein_import


id: CL:3341
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3341_Mixed,_incl._Loader_and_inhibitor_of_phage_G40P,_and_Type_IV_secretion-system_coupling_protein_DNA-binding_domain

description:
  Mixed, incl. Loader and inhibitor of phage G40P, and Type IV secretion-system coupling protein DNA-binding domain


id: CL:3367
description: Mixed, incl. Iron hydrogenase, and [FeFe]-hydrogenase system regulator TM1266
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3367_Mixed,_incl._Iron_hydrogenase,_and_[FeFe]-hydrogenase_system_regulator_TM1266


id: CL:3371
description: Biotin and thiamin synthesis-associated domain, and [FeFe]-hydrogenase system regulator TM1266
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3371_Biotin_and_thiamin_synthesis-associated_domain,_and_[FeFe]-hydrogenase_system_regulator_TM1266


id: CL:339
description: Aminoacyl-tRNA synthetase, class I, conserved site, and phenylalanyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:339_Aminoacyl-tRNA_synthetase,_class_I,_conserved_site,_and_phenylalanyl-tRNA_aminoacylation


id: CL:3398
description: Mixed, incl. Glycosyl transferase family 2, and Arsenical-resistance protein Acr3
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3398_Mixed,_incl._Glycosyl_transferase_family_2,_and_Arsenical-resistance_protein_Acr3


id: CL:3399
description: Mixed, incl. Glycosyl transferase family 2, and Sister chromatid cohesion
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3399_Mixed,_incl._Glycosyl_transferase_family_2,_and_Sister_chromatid_cohesion


id: CL:3400
description: Mostly uncharacterized, incl. Tetratricopeptide repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3400_Mostly_uncharacterized,_incl._Tetratricopeptide_repeats


id: CL:3411
description: Glycosyl transferase family 2, and Sister chromatid cohesion
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3411_Glycosyl_transferase_family_2,_and_Sister_chromatid_cohesion


id: CL:342
description: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:342_Aminoacyl-tRNA_synthetase,_class_Ia,_anticodon-binding


id: CL:3420
description: Arsenical-resistance protein Acr3, and Cytochrome C biogenesis protein transmembrane region
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3420_Arsenical-resistance_protein_Acr3,_and_Cytochrome_C_biogenesis_protein_transmembrane_region


id: CL:3434
description: Mixed, incl. Putative regulatory protein, and Uncharacterised ArCR, COG2043
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3434_Mixed,_incl._Putative_regulatory_protein,_and_Uncharacterised_ArCR,_COG2043


id: CL:3436
description: Mixed, incl. Putative regulatory protein, and Uncharacterised ArCR, COG2043
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3436_Mixed,_incl._Putative_regulatory_protein,_and_Uncharacterised_ArCR,_COG2043


id: CL:3453
description: Mixed, incl. Transmembrane protein TMEM64, and mRNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3453_Mixed,_incl._Transmembrane_protein_TMEM64,_and_mRNA_catabolic_process


id: CL:3462
description: Mixed, incl. Sulfate transport, and Amino acid salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3462_Mixed,_incl._Sulfate_transport,_and_Amino_acid_salvage


id: CL:3487
description: Mixed, incl. DNA replication, synthesis of RNA primer, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3487_Mixed,_incl._DNA_replication,_synthesis_of_RNA_primer,_and_Signal


id: CL:3504
description: Mixed, incl. NMT1/THI5 like, and Protein of unknown function (DUF3792)
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3504_Mixed,_incl._NMT1/THI5_like,_and_Protein_of_unknown_function_(DUF3792)


id: CL:3506
description: Mixed, incl. NMT1/THI5 like, and Putative zinc- or iron-chelating domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3506_Mixed,_incl._NMT1/THI5_like,_and_Putative_zinc-_or_iron-chelating_domain


id: CL:3529
description: Signal transduction, and Cilium
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3529_Signal_transduction,_and_Cilium


id: CL:3530
description: Signal transduction, and Cilium
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3530_Signal_transduction,_and_Cilium


id: CL:3531
description: Signal transduction, and Cilium
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3531_Signal_transduction,_and_Cilium


id: CL:3532
description: Intracellular signal transduction, and GGDEF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3532_Intracellular_signal_transduction,_and_GGDEF_domain


id: CL:3534
description: Intracellular signal transduction, and Naphthalene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3534_Intracellular_signal_transduction,_and_Naphthalene_degradation


id: CL:3536
description: Intracellular signal transduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3536_Intracellular_signal_transduction


id: CL:3538
description: Phosphorelay signal transduction system
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3538_Phosphorelay_signal_transduction_system


id: CL:3540
description: Two-component regulatory system, and His Kinase A (phosphoacceptor) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3540_Two-component_regulatory_system,_and_His_Kinase_A_(phosphoacceptor)_domain


id: CL:3541
description: Two-component regulatory system
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3541_Two-component_regulatory_system


id: CL:3555
description: His Kinase A (phosphoacceptor) domain, and Sequence-specific DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3555_His_Kinase_A_(phosphoacceptor)_domain,_and_Sequence-specific_DNA_binding


id: CL:3572
description: DNA binding HTH domain, Fis-type, and His Kinase A (phosphoacceptor) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3572_DNA_binding_HTH_domain,_Fis-type,_and_His_Kinase_A_(phosphoacceptor)_domain


id: CL:3610
description: GGDEF domain, and HD-GYP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3610_GGDEF_domain,_and_HD-GYP_domain


id: CL:3612
description: GGDEF domain, and HD-GYP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3612_GGDEF_domain,_and_HD-GYP_domain


id: CL:3622
description: EAL domain, and HPT domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3622_EAL_domain,_and_HPT_domain_superfamily


id: CL:3655
description: STAS domain, and Phosphatase RsbX
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3655_STAS_domain,_and_Phosphatase_RsbX


id: CL:3676
description: Cilium, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3676_Cilium,_and_Bacterial_chemotaxis


id: CL:3677
description: Cilium, and Bacterial-type flagellum organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3677_Cilium,_and_Bacterial-type_flagellum_organization


id: CL:3684
description: Bacterial-type flagellum-dependent cell motility, and Bacterial flagellum protein export
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3684_Bacterial-type_flagellum-dependent_cell_motility,_and_Bacterial_flagellum_protein_export


id: CL:3686
description: Bacterial-type flagellum basal body, and Bacterial flagellum protein export
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3686_Bacterial-type_flagellum_basal_body,_and_Bacterial_flagellum_protein_export


id: CL:3687
description: Bacterial-type flagellum basal body, and Bacterial flagellum protein export
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3687_Bacterial-type_flagellum_basal_body,_and_Bacterial_flagellum_protein_export


id: CL:3689
description: Bacterial flagellum protein export, and Bacterial-type flagellum assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3689_Bacterial_flagellum_protein_export,_and_Bacterial-type_flagellum_assembly


id: CL:3709
description: Flagellar basal body rod protein, conserved site, and Cytoskeletal motor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3709_Flagellar_basal_body_rod_protein,_conserved_site,_and_Cytoskeletal_motor_activity


id: CL:3730
description: Bacterial-type flagellum hook, and Bacterial flagellum biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3730_Bacterial-type_flagellum_hook,_and_Bacterial_flagellum_biogenesis


id: CL:3773
description: CheW-like domain, and Double Cache domain 3
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3773_CheW-like_domain,_and_Double_Cache_domain_3


id: CL:3801
description: Histidine kinase, and Helix_turn_helix, Lux Regulon
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3801_Histidine_kinase,_and_Helix_turn_helix,_Lux_Regulon


id: CL:3817
description: Mixed, incl. Macro domain-like, and YjbQ-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3817_Mixed,_incl._Macro_domain-like,_and_YjbQ-like_superfamily


id: CL:3826
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3826_Mixed,_incl._Negative_regulation_of_cellular_process,_and_Type_II_secretion_system_(T2SS),_protein_F

description:
  Mixed, incl. Negative regulation of cellular process, and Type II secretion system (T2SS), protein F


id: CL:3828
description: Mixed, incl. Type II secretion system (T2SS), protein F, and Regulation of cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3828_Mixed,_incl._Type_II_secretion_system_(T2SS),_protein_F,_and_Regulation_of_cell_division


id: CL:3829
description: Mixed, incl. Type II secretion system (T2SS), protein F, and Type II/IV secretion system protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3829_Mixed,_incl._Type_II_secretion_system_(T2SS),_protein_F,_and_Type_II/IV_secretion_system_protein


id: CL:383
description: SRP54-type protein, helical bundle domain, and Translocation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:383_SRP54-type_protein,_helical_bundle_domain,_and_Translocation


id: CL:3830
description: Mixed, incl. Type II secretion system (T2SS), protein F, and Type II/IV secretion system protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3830_Mixed,_incl._Type_II_secretion_system_(T2SS),_protein_F,_and_Type_II/IV_secretion_system_protein


id: CL:3832
description: Mixed, incl. Type II secretion system (T2SS), protein F, and Flp/Fap pilin component
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3832_Mixed,_incl._Type_II_secretion_system_(T2SS),_protein_F,_and_Flp/Fap_pilin_component


id: CL:3834
description: Mixed, incl. Regulation of cell death, and Type II secretion system protein GspF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3834_Mixed,_incl._Regulation_of_cell_death,_and_Type_II_secretion_system_protein_GspF_domain


id: CL:3838
description: Mixed, incl. Pilus assembly, Flp-type CpaB, and TadE-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3838_Mixed,_incl._Pilus_assembly,_Flp-type_CpaB,_and_TadE-like


id: CL:3854
description: Flp/Fap pilin component, and Type II secretion system (T2SS), protein F
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3854_Flp/Fap_pilin_component,_and_Type_II_secretion_system_(T2SS),_protein_F


id: CL:3866
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3866_Mixed,_incl._CobQ/CobB/MinD/ParA_nucleotide_binding_domain,_and_Type_II_secretion_system_protein_GspF_domain

description:
  Mixed, incl. CobQ/CobB/MinD/ParA nucleotide binding domain, and Type II secretion system protein GspF domain


id: CL:3868
description: CobQ/CobB/MinD/ParA nucleotide binding domain, and Type II secretion system protein GspF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3868_CobQ/CobB/MinD/ParA_nucleotide_binding_domain,_and_Type_II_secretion_system_protein_GspF_domain


id: CL:3891
description: Mixed, incl. TraG, P-loop domain, and Transglycosylase SLT domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3891_Mixed,_incl._TraG,_P-loop_domain,_and_Transglycosylase_SLT_domain_1


id: CL:3906
description: Regulation of cell division, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3906_Regulation_of_cell_division,_and_Signal


id: CL:3923
description: Mixed, incl. PKD domain superfamily, and Helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3923_Mixed,_incl._PKD_domain_superfamily,_and_Helix-turn-helix_domain


id: CL:3925
description: Mixed, incl. Helix-turn-helix domain, and Loader and inhibitor of phage G40P
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3925_Mixed,_incl._Helix-turn-helix_domain,_and_Loader_and_inhibitor_of_phage_G40P


id: CL:3953
description: Mixed, incl. Bacterial secretion system, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3953_Mixed,_incl._Bacterial_secretion_system,_and_Pilus_organization


id: CL:3956
description: Mixed, incl. Pilus organization, and Horizontal gene transfer
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3956_Mixed,_incl._Pilus_organization,_and_Horizontal_gene_transfer


id: CL:3957
description: Mixed, incl. Pilus organization, and Protein transport across the cell outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3957_Mixed,_incl._Pilus_organization,_and_Protein_transport_across_the_cell_outer_membrane


id: CL:3958
description: Mixed, incl. Pilus organization, and Protein transport across the cell outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3958_Mixed,_incl._Pilus_organization,_and_Protein_transport_across_the_cell_outer_membrane


id: CL:3960
description: Mixed, incl. GspF/PilC family, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3960_Mixed,_incl._GspF/PilC_family,_and_Pilus_organization


id: CL:3962
description: GspF/PilC family, and Pilus retraction protein PilT/PilU
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3962_GspF/PilC_family,_and_Pilus_retraction_protein_PilT/PilU


id: CL:3988
description: Pilus organization, and Prokaryotic N-terminal methylation motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:3988_Pilus_organization,_and_Prokaryotic_N-terminal_methylation_motif


id: CL:4000
description: Pilin-like, and Pilus retraction protein PilT/PilU
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4000_Pilin-like,_and_Pilus_retraction_protein_PilT/PilU


id: CL:4010
description: Horizontal gene transfer, and Subunit ChlI of Mg-chelatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4010_Horizontal_gene_transfer,_and_Subunit_ChlI_of_Mg-chelatase


id: CL:4031
description: Type IV leader peptidase family, and Transmembrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4031_Type_IV_leader_peptidase_family,_and_Transmembrane


id: CL:4040
description: Mixed, incl. NodB homology domain, and Iron ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4040_Mixed,_incl._NodB_homology_domain,_and_Iron_ion_transport


id: CL:4041
description: Mixed, incl. Iron ion transport, and Ferrous iron transporter FeoA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4041_Mixed,_incl._Iron_ion_transport,_and_Ferrous_iron_transporter_FeoA_domain


id: CL:4042
description: Mixed, incl. Iron ion transport, and Ferrous iron transporter FeoA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4042_Mixed,_incl._Iron_ion_transport,_and_Ferrous_iron_transporter_FeoA_domain


id: CL:4044
description: Iron ion transport, and Ferrous iron transporter FeoA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4044_Iron_ion_transport,_and_Ferrous_iron_transporter_FeoA_domain


id: CL:4058
description: Mixed, incl. Sister chromatid cohesion, and Purine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4058_Mixed,_incl._Sister_chromatid_cohesion,_and_Purine_metabolism


id: CL:4067
description: Mixed, incl. Phosphonate and phosphinate metabolism, and L,D-transpeptidase catalytic domain-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4067_Mixed,_incl._Phosphonate_and_phosphinate_metabolism,_and_L,D-transpeptidase_catalytic_domain-like


id: CL:4080
description: Mixed, incl. Xylanase activity, and Chitin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4080_Mixed,_incl._Xylanase_activity,_and_Chitin_binding


id: CL:4100
description: Mostly uncharacterized, incl. Regulation of cell division, and TrbC/VIRB2 pilin
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4100_Mostly_uncharacterized,_incl._Regulation_of_cell_division,_and_TrbC/VIRB2_pilin


id: CL:4103
description: Mixed, incl. TraG, P-loop domain, and VanW like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4103_Mixed,_incl._TraG,_P-loop_domain,_and_VanW_like_protein


id: CL:4119
description: Mixed, incl. Helicase HerA, central domain, and DNA condensation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4119_Mixed,_incl._Helicase_HerA,_central_domain,_and_DNA_condensation


id: CL:413
description: Mixed, incl. RNA 5-end processing, and Protein carrier chaperone
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:413_Mixed,_incl._RNA_5-end_processing,_and_Protein_carrier_chaperone


id: CL:4140
description: Mostly uncharacterized, incl. Anaerobic coproporphyrinogen-III oxidase, and Peptidase U32
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4140_Mostly_uncharacterized,_incl._Anaerobic_coproporphyrinogen-III_oxidase,_and_Peptidase_U32


id: CL:4141
description: Mostly uncharacterized, incl. Peptidase U32, and Aquaporin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4141_Mostly_uncharacterized,_incl._Peptidase_U32,_and_Aquaporin-like


id: CL:4143
description: Mixed, incl. Aquaporin-like, and RNA 5-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4143_Mixed,_incl._Aquaporin-like,_and_RNA_5-end_processing


id: CL:4159
description: Mixed, incl. Peptidase U32, and Lytic endotransglycosylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4159_Mixed,_incl._Peptidase_U32,_and_Lytic_endotransglycosylase_activity


id: CL:4171
description: Anaerobic coproporphyrinogen-III oxidase, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4171_Anaerobic_coproporphyrinogen-III_oxidase,_and_Signal


id: CL:4185
description: Mixed, incl. Biotin metabolism, and Spore germination
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4185_Mixed,_incl._Biotin_metabolism,_and_Spore_germination


id: CL:4188
description: Mixed, incl. Biotin metabolism, and Spore germination
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4188_Mixed,_incl._Biotin_metabolism,_and_Spore_germination


id: CL:4189
description: Mixed, incl. Biotin metabolic process, and Spore germination
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4189_Mixed,_incl._Biotin_metabolic_process,_and_Spore_germination


id: CL:4190
description: Biotin metabolic process, and Spore germination
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4190_Biotin_metabolic_process,_and_Spore_germination


id: CL:4214
description: Mixed, incl. Putative zinc-finger, and Acid phosphatase homologues
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4214_Mixed,_incl._Putative_zinc-finger,_and_Acid_phosphatase_homologues


id: CL:4231
description: Mixed, incl. YefM-like superfamily, and Toxin-antitoxin system, RelE/ParE toxin domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4231_Mixed,_incl._YefM-like_superfamily,_and_Toxin-antitoxin_system,_RelE/ParE_toxin_domain_superfamily


id: CL:4249
description: Mixed, incl. LexA-like, and Aspartyl/glutamyl-tRNA amidotransferase subunit B-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4249_Mixed,_incl._LexA-like,_and_Aspartyl/glutamyl-tRNA_amidotransferase_subunit_B-like


id: CL:4261
description: Mostly uncharacterized, incl. Dioxygenase activity, and Diadenylate cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4261_Mostly_uncharacterized,_incl._Dioxygenase_activity,_and_Diadenylate_cyclase_activity


id: CL:4263
description: Mixed, incl. Dioxygenase activity, and Diadenylate cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4263_Mixed,_incl._Dioxygenase_activity,_and_Diadenylate_cyclase_activity


id: CL:4277
description: Mixed, incl. Domain of unknown function DUF2179, and Uncharacterized membrane protein YkvI
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4277_Mixed,_incl._Domain_of_unknown_function_DUF2179,_and_Uncharacterized_membrane_protein_YkvI


id: CL:428
description: Isoprenoid biosynthetic process, and Antibiotic resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:428_Isoprenoid_biosynthetic_process,_and_Antibiotic_resistance


id: CL:4287
description: Mixed, incl. Tetrapyrrole metabolic process, and ABC transporters
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4287_Mixed,_incl._Tetrapyrrole_metabolic_process,_and_ABC_transporters


id: CL:4289
description: Mixed, incl. Tetrapyrrole metabolic process, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4289_Mixed,_incl._Tetrapyrrole_metabolic_process,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:4290
description: Mixed, incl. Tetrapyrrole metabolic process, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4290_Mixed,_incl._Tetrapyrrole_metabolic_process,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:4291
description: Tetrapyrrole metabolic process, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4291_Tetrapyrrole_metabolic_process,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:4292
description: Tetrapyrrole metabolic process, and AsnC-type helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4292_Tetrapyrrole_metabolic_process,_and_AsnC-type_helix-turn-helix_domain


id: CL:4293
description: Cobalamin metabolic process, and Siroheme metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4293_Cobalamin_metabolic_process,_and_Siroheme_metabolic_process


id: CL:4319
description: Cobalamin transport, and Cobalamin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4319_Cobalamin_transport,_and_Cobalamin_metabolic_process


id: CL:4339
description: Porphyrin biosynthesis, and AsnC-type helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4339_Porphyrin_biosynthesis,_and_AsnC-type_helix-turn-helix_domain


id: CL:4359
description: ABC transporter, CbiO/EcfA subunit, and Cobalt ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4359_ABC_transporter,_CbiO/EcfA_subunit,_and_Cobalt_ion_transport


id: CL:4360
description: Cobalt ion transport, and Cobalt transport protein ATP-binding subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4360_Cobalt_ion_transport,_and_Cobalt_transport_protein_ATP-binding_subunit


id: CL:4375
description: ABC transporter, CbiO/EcfA subunit, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4375_ABC_transporter,_CbiO/EcfA_subunit,_and_Cobalt_transport_protein


id: CL:4390
description: Nickel insertion protein, and Pyridinium-3,5-biscarboxylic acid mononucleotide synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4390_Nickel_insertion_protein,_and_Pyridinium-3,5-biscarboxylic_acid_mononucleotide_synthase


id: CL:4408
description: Mixed, incl. Nickel cation transmembrane transporter activity, and Solute-binding protein family 5
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4408_Mixed,_incl._Nickel_cation_transmembrane_transporter_activity,_and_Solute-binding_protein_family_5


id: CL:4410
description: Nickel cation transmembrane transporter activity, and Solute-binding protein family 5
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4410_Nickel_cation_transmembrane_transporter_activity,_and_Solute-binding_protein_family_5


id: CL:4413
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4413_Oligopeptide/dipeptide_ABC_transporter,_C-terminal,_and_Nickel_cation_transmembrane_transporter_activity

description:
  Oligopeptide/dipeptide ABC transporter, C-terminal, and Nickel cation transmembrane transporter activity


id: CL:443
description: Polyprenyl synthetase, and NADPH binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:443_Polyprenyl_synthetase,_and_NADPH_binding


id: CL:4449
description: Mixed, incl. Amino acid transport, and UspA
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4449_Mixed,_incl._Amino_acid_transport,_and_UspA


id: CL:4450
description: Mixed, incl. Amino acid transport, and Ligand-gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4450_Mixed,_incl._Amino_acid_transport,_and_Ligand-gated_channel_activity


id: CL:4451
description: Mixed, incl. EamA domain, and Ligand-gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4451_Mixed,_incl._EamA_domain,_and_Ligand-gated_channel_activity


id: CL:4454
description: Ligand-gated channel activity, and Amino acid ABC transporter, permease protein, 3-TM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4454_Ligand-gated_channel_activity,_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain


id: CL:4471
description: Mixed, incl. EamA domain, and Uncharacterised protein, DegV family COG1307
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4471_Mixed,_incl._EamA_domain,_and_Uncharacterised_protein,_DegV_family_COG1307


id: CL:4482
description: Mixed, incl. PPC domain, and NIL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4482_Mixed,_incl._PPC_domain,_and_NIL_domain


id: CL:4484
description: Mixed, incl. PPC domain, and Modified amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4484_Mixed,_incl._PPC_domain,_and_Modified_amino_acid_transport


id: CL:4501
description: Mixed, incl. UspA, and Fluoride transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4501_Mixed,_incl._UspA,_and_Fluoride_transmembrane_transport


id: CL:4502
description: Mixed, incl. UspA, and Fluoride transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4502_Mixed,_incl._UspA,_and_Fluoride_transmembrane_transport


id: CL:4504
description: Double-strand break repair via homologous recombination, and CAAX-box protein maturation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4504_Double-strand_break_repair_via_homologous_recombination,_and_CAAX-box_protein_maturation


id: CL:4518
description: UspA, and Vitamin catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4518_UspA,_and_Vitamin_catabolic_process


id: CL:4529
description: Mixed, incl. Ketone catabolic process, and Aminoacyl-tRNA editing domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4529_Mixed,_incl._Ketone_catabolic_process,_and_Aminoacyl-tRNA_editing_domain


id: CL:4539
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4539_Mixed,_incl._Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_and_Nitrogen_regulatory_protein_PII

description:
  Mixed, incl. Oxidoreductase activity, acting on iron-sulfur proteins as donors, and Nitrogen regulatory protein PII


id: CL:454
description: Mixed, incl. Polyprenol metabolic process, and Antibiotic resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:454_Mixed,_incl._Polyprenol_metabolic_process,_and_Antibiotic_resistance


id: CL:4540
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4540_Mixed,_incl._Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_and_Nitrogen_regulatory_protein_PII

description:
  Mixed, incl. Oxidoreductase activity, acting on iron-sulfur proteins as donors, and Nitrogen regulatory protein PII


id: CL:4541
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4541_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_and_Nitrogen_regulatory_protein_PII

description:
  Oxidoreductase activity, acting on iron-sulfur proteins as donors, and Nitrogen regulatory protein PII


id: CL:4545
description: Nitrogen fixation, and MoaA/NifB/PqqE, iron-sulphur binding, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4545_Nitrogen_fixation,_and_MoaA/NifB/PqqE,_iron-sulphur_binding,_conserved_site


id: CL:457
description: Mixed, incl. Polyprenol metabolic process, and De novo CTP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:457_Mixed,_incl._Polyprenol_metabolic_process,_and_De_novo_CTP_biosynthetic_process


id: CL:4575
description: Mixed, incl. Alanine metabolic process, and Calcineurin-like phosphoesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4575_Mixed,_incl._Alanine_metabolic_process,_and_Calcineurin-like_phosphoesterase


id: CL:4589
description: Mostly uncharacterized, incl. Cation transport, and LysR, substrate-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4589_Mostly_uncharacterized,_incl._Cation_transport,_and_LysR,_substrate-binding


id: CL:4590
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4590_Mostly_uncharacterized,_incl._LysR,_substrate-binding,_and_Uncharacterised_protein_family_UPF0324,_prokaryote

description:
  Mostly uncharacterized, incl. LysR, substrate-binding, and Uncharacterised protein family UPF0324, prokaryote


id: CL:4591
description: Mostly uncharacterized, incl. IS66 C-terminal element, and Propanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4591_Mostly_uncharacterized,_incl._IS66_C-terminal_element,_and_Propanoate_metabolism


id: CL:4592
description: Mostly uncharacterized, incl. IS66 C-terminal element, and Propanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4592_Mostly_uncharacterized,_incl._IS66_C-terminal_element,_and_Propanoate_metabolism


id: CL:4593
description: Mostly uncharacterized, incl. IS66 C-terminal element, and Sulfate reduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4593_Mostly_uncharacterized,_incl._IS66_C-terminal_element,_and_Sulfate_reduction


id: CL:4595
description: Mostly uncharacterized, incl. Sulfate reduction, and Helicase HerA, central domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4595_Mostly_uncharacterized,_incl._Sulfate_reduction,_and_Helicase_HerA,_central_domain


id: CL:4600
description: Mixed, incl. Sulfate reduction, and Helicase HerA, central domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4600_Mixed,_incl._Sulfate_reduction,_and_Helicase_HerA,_central_domain


id: CL:4621
description: IS66 C-terminal element, and Helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4621_IS66_C-terminal_element,_and_Helix-turn-helix_domain


id: CL:4630
description: Mixed, incl. Tungsten cofactor oxidoreducase radical SAM maturase, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4630_Mixed,_incl._Tungsten_cofactor_oxidoreducase_radical_SAM_maturase,_and_4Fe-4S_binding_domain


id: CL:4652
description: Mixed, incl. LysR, substrate-binding, and Uncharacterised protein family UPF0324, prokaryote
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4652_Mixed,_incl._LysR,_substrate-binding,_and_Uncharacterised_protein_family_UPF0324,_prokaryote


id: CL:4653
description: LysR, substrate-binding, and Uncharacterised protein family UPF0324, prokaryote
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4653_LysR,_substrate-binding,_and_Uncharacterised_protein_family_UPF0324,_prokaryote


id: CL:4668
description: Mixed, incl. Conserved hypothetical protein 698, and UspA
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4668_Mixed,_incl._Conserved_hypothetical_protein_698,_and_UspA


id: CL:4677
description: Mixed, incl. Cation transport, and Ferric-uptake regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4677_Mixed,_incl._Cation_transport,_and_Ferric-uptake_regulator


id: CL:4678
description: Mixed, incl. L-lysine transport, and Ferric-uptake regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4678_Mixed,_incl._L-lysine_transport,_and_Ferric-uptake_regulator


id: CL:4680
description: Mixed, incl. Response to cold, and CheC-like family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4680_Mixed,_incl._Response_to_cold,_and_CheC-like_family


id: CL:4700
description: Cell adhesion, and Ferric-uptake regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4700_Cell_adhesion,_and_Ferric-uptake_regulator


id: CL:4713
description: Mostly uncharacterized, incl. PhoU domain, and GIY-YIG endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4713_Mostly_uncharacterized,_incl._PhoU_domain,_and_GIY-YIG_endonuclease


id: CL:4715
description: Mixed, incl. Aromatic acid exporter family member 1, and HI0933-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4715_Mixed,_incl._Aromatic_acid_exporter_family_member_1,_and_HI0933-like_protein


id: CL:473
description: Mixed, incl. Protein folding, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:473_Mixed,_incl._Protein_folding,_and_ATP-dependent_peptidase_activity


id: CL:4734
description: Mixed, incl. Ubiquinone and other terpenoid-quinone biosynthesis, and Two-component system
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4734_Mixed,_incl._Ubiquinone_and_other_terpenoid-quinone_biosynthesis,_and_Two-component_system


id: CL:4735
description: Mixed, incl. Two-component system, and Diaminopimelate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4735_Mixed,_incl._Two-component_system,_and_Diaminopimelate_biosynthetic_process


id: CL:4736
description: Mixed, incl. Carboxylic acid transport, and TRAP transporter solute receptor DctP
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4736_Mixed,_incl._Carboxylic_acid_transport,_and_TRAP_transporter_solute_receptor_DctP


id: CL:4737
description: Mixed, incl. C4-dicarboxylate transport, and TRAP transporter solute receptor DctP
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4737_Mixed,_incl._C4-dicarboxylate_transport,_and_TRAP_transporter_solute_receptor_DctP


id: CL:4739
description: Mixed, incl. DapA-like, and Phosphomethylpyrimidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4739_Mixed,_incl._DapA-like,_and_Phosphomethylpyrimidine_kinase


id: CL:474
description: Protein folding, and Clp protease
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:474_Protein_folding,_and_Clp_protease


id: CL:4755
description: C4-dicarboxylate transport, and TRAP transporter solute receptor DctP
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4755_C4-dicarboxylate_transport,_and_TRAP_transporter_solute_receptor_DctP


id: CL:476
description: Protein folding, and Clp protease
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:476_Protein_folding,_and_Clp_protease


id: CL:4768
description: Mixed, incl. Secondary active transmembrane transporter activity, and Sodium/solute symporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4768_Mixed,_incl._Secondary_active_transmembrane_transporter_activity,_and_Sodium/solute_symporter


id: CL:4771
description: Mixed, incl. Sodium:neurotransmitter symporter, and Response to starvation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4771_Mixed,_incl._Sodium:neurotransmitter_symporter,_and_Response_to_starvation


id: CL:4785
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4785_Mixed,_incl._Trp_repressor/replication_initiator,_and_TRAP_C4-dicarboxylate_transport_system_permease_DctM_subunit

description:
  Mixed, incl. Trp repressor/replication initiator, and TRAP C4-dicarboxylate transport system permease DctM subunit


id: CL:4798
description: Mixed, incl. Histidine kinase, and LytTr DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4798_Mixed,_incl._Histidine_kinase,_and_LytTr_DNA-binding_domain


id: CL:4801
description: Mixed, incl. Histidine kinase, and LytTr DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4801_Mixed,_incl._Histidine_kinase,_and_LytTr_DNA-binding_domain


id: CL:4802
description: Histidine kinase, and LytTr DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4802_Histidine_kinase,_and_LytTr_DNA-binding_domain


id: CL:4813
description: Mixed, incl. Heparin binding, and Peptidase dimerisation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4813_Mixed,_incl._Heparin_binding,_and_Peptidase_dimerisation_domain


id: CL:4841
description: Mixed, incl. Quinone metabolic process, and Degradation of aromatic compounds
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4841_Mixed,_incl._Quinone_metabolic_process,_and_Degradation_of_aromatic_compounds


id: CL:4843
description: Quinone metabolic process, and Prenyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4843_Quinone_metabolic_process,_and_Prenyltransferase


id: CL:4844
description: Ubiquinone metabolic process, and Prenyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4844_Ubiquinone_metabolic_process,_and_Prenyltransferase


id: CL:4871
description: Mixed, incl. Fluorobenzoate degradation, and Iron ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4871_Mixed,_incl._Fluorobenzoate_degradation,_and_Iron_ion_transport


id: CL:4872
description: Fluorobenzoate degradation, and Iron ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4872_Fluorobenzoate_degradation,_and_Iron_ion_transport


id: CL:4883
description: Mixed, incl. Nucleotide diphosphatase activity, and Crp-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4883_Mixed,_incl._Nucleotide_diphosphatase_activity,_and_Crp-type_HTH_domain


id: CL:4900
description: ABC transporter, permease, and ABC transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4900_ABC_transporter,_permease,_and_ABC_transporter


id: CL:491
description: Heat shock protein 70 family, and DnaJ domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:491_Heat_shock_protein_70_family,_and_DnaJ_domain


id: CL:4922
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4922_Mixed,_incl._beta-Lactam_resistance,_and_RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain

description:
  Mixed, incl. beta-Lactam resistance, and RND efflux pump, membrane fusion protein, barrel-sandwich domain


id: CL:4923
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4923_Mixed,_incl._beta-Lactam_resistance,_and_RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain

description:
  Mixed, incl. beta-Lactam resistance, and RND efflux pump, membrane fusion protein, barrel-sandwich domain


id: CL:4924
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4924_Mixed,_incl._RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain,_and_beta-Lactam_resistance

description:
  Mixed, incl. RND efflux pump, membrane fusion protein, barrel-sandwich domain, and beta-Lactam resistance


id: CL:4925
description: RND efflux pump, membrane fusion protein, barrel-sandwich domain, and beta-Lactam resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4925_RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain,_and_beta-Lactam_resistance


id: CL:4927
description: Mixed, incl. RND efflux pump, membrane fusion protein, barrel-sandwich domain, and MMPL family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4927_Mixed,_incl._RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain,_and_MMPL_family


id: CL:4929
description: RND efflux pump, membrane fusion protein, barrel-sandwich domain, and MMPL family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4929_RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain,_and_MMPL_family


id: CL:4931
description: RND efflux pump, membrane fusion protein, and MMPL family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4931_RND_efflux_pump,_membrane_fusion_protein,_and_MMPL_family


id: CL:4967
description: L-serine ammonia-lyase activity, and MarR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4967_L-serine_ammonia-lyase_activity,_and_MarR-type_HTH_domain


id: CL:4979
description: Mixed, incl. Styrene degradation, and Amino acid/polyamine transporter I
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4979_Mixed,_incl._Styrene_degradation,_and_Amino_acid/polyamine_transporter_I


id: CL:4996
description: Mixed, incl. Heavy-metal-associated domain, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4996_Mixed,_incl._Heavy-metal-associated_domain,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:4998
description: Mixed, incl. Predicted permease, and MFS_1 like family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:4998_Mixed,_incl._Predicted_permease,_and_MFS_1_like_family


id: CL:5016
description: Heavy-metal-associated domain, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5016_Heavy-metal-associated_domain,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:502
description: Clp protease, and Clp ATPase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:502_Clp_protease,_and_Clp_ATPase,_C-terminal


id: CL:5030
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5030_Mixed,_incl._SpoVT_/_AbrB_like_domain,_and_Toxin-antitoxin_system,_RelE/ParE_toxin_domain_superfamily

description:
  Mixed, incl. SpoVT / AbrB like domain, and Toxin-antitoxin system, RelE/ParE toxin domain superfamily


id: CL:5039
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5039_Mixed,_incl._Amino_acid_transport,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal

description:
  Mixed, incl. Amino acid transport, and Branched-chain amino acid ATP-binding cassette transporter, C-terminal


id: CL:5040
description: Mixed, incl. Branched-chain amino acid transport, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5040_Mixed,_incl._Branched-chain_amino_acid_transport,_and_Leucine-binding_protein_domain


id: CL:5043
description: Mixed, incl. Branched-chain amino acid transport, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5043_Mixed,_incl._Branched-chain_amino_acid_transport,_and_Leucine-binding_protein_domain


id: CL:5047
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5047_Branched-chain_amino_acid_transport,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal

description:
  Branched-chain amino acid transport, and Branched-chain amino acid ATP-binding cassette transporter, C-terminal


id: CL:5051
description: ABC transporter, permease, and Branched-chain amino acid ATP-binding cassette transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5051_ABC_transporter,_permease,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter


id: CL:5067
description: Branched-chain amino acid transport, and Branched-chain amino acid ATP-binding cassette transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5067_Branched-chain_amino_acid_transport,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter


id: CL:5088
description: Mixed, incl. Alpha/Beta hydrolase fold, and CBS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5088_Mixed,_incl._Alpha/Beta_hydrolase_fold,_and_CBS_domain


id: CL:5097
description: Mixed, incl. Phospholipid metabolic process, and CAP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5097_Mixed,_incl._Phospholipid_metabolic_process,_and_CAP_domain


id: CL:5099
description: Mixed, incl. Phospholipid metabolic process, and P-type ion transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5099_Mixed,_incl._Phospholipid_metabolic_process,_and_P-type_ion_transporter_activity


id: CL:5101
description: CDP-alcohol phosphatidyltransferase, and Metallo-dependent phosphatase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5101_CDP-alcohol_phosphatidyltransferase,_and_Metallo-dependent_phosphatase-like


id: CL:5113
description: Mixed, incl. Phosphate acyltransferases, and P-type ion transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5113_Mixed,_incl._Phosphate_acyltransferases,_and_P-type_ion_transporter_activity


id: CL:512
description: Mixed, incl. UVR domain, and Diadenylate cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:512_Mixed,_incl._UVR_domain,_and_Diadenylate_cyclase_activity


id: CL:5124
description: Mixed, incl. CAP domain, and DivIVA family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5124_Mixed,_incl._CAP_domain,_and_DivIVA_family


id: CL:5140
description: Mixed, incl. Amine-lyase activity, and Pyruvate kinase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5140_Mixed,_incl._Amine-lyase_activity,_and_Pyruvate_kinase,_C-terminal


id: CL:5141
description: Mixed, incl. Amine-lyase activity, and Pyruvate kinase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5141_Mixed,_incl._Amine-lyase_activity,_and_Pyruvate_kinase,_C-terminal


id: CL:5152
description: Glycosyl transferase family 2, and Transmembrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5152_Glycosyl_transferase_family_2,_and_Transmembrane


id: CL:5161
description: Mixed, incl. Protein maturation, and ATPase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5161_Mixed,_incl._Protein_maturation,_and_ATPase_complex


id: CL:5165
description: ATPase complex, and Protein maturation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5165_ATPase_complex,_and_Protein_maturation


id: CL:5177
description: Mixed, incl. AIG2-like family, and DNA condensation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5177_Mixed,_incl._AIG2-like_family,_and_DNA_condensation


id: CL:5188
description: Mixed, incl. SpoVR like protein, and Arsenical pump membrane protein, ArsB
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5188_Mixed,_incl._SpoVR_like_protein,_and_Arsenical_pump_membrane_protein,_ArsB


id: CL:5189
description: Mixed, incl. SpoVR like protein, and PPC domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5189_Mixed,_incl._SpoVR_like_protein,_and_PPC_domain


id: CL:5191
description: SpoVR like protein, and Von Willebrand factor A-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5191_SpoVR_like_protein,_and_Von_Willebrand_factor_A-like_domain_superfamily


id: CL:5216
description: Mixed, incl. Arsenical pump membrane protein, ArsB, and DNA ligase (ATP) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5216_Mixed,_incl._Arsenical_pump_membrane_protein,_ArsB,_and_DNA_ligase_(ATP)_activity


id: CL:5217
description: DNA ligase (ATP) activity, and Uracil DNA N-glycosylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5217_DNA_ligase_(ATP)_activity,_and_Uracil_DNA_N-glycosylase_activity


id: CL:5226
description: Arsenical pump membrane protein, ArsB, and HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5226_Arsenical_pump_membrane_protein,_ArsB,_and_HTH_domain


id: CL:523
description: Peptidase complex, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:523_Peptidase_complex,_and_DNA_integration


id: CL:5235
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5235_Mostly_uncharacterized,_incl._Acyl_transferase/acyl_hydrolase/lysophospholipase,_and_Cation_efflux_family

description:
  Mostly uncharacterized, incl. Acyl transferase/acyl hydrolase/lysophospholipase, and Cation efflux family


id: CL:5237
description: Mixed, incl. Cation efflux family, and Protein kinase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5237_Mixed,_incl._Cation_efflux_family,_and_Protein_kinase_domain


id: CL:5249
description: Mixed, incl. Acyl transferase/acyl hydrolase/lysophospholipase, and DNA primase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5249_Mixed,_incl._Acyl_transferase/acyl_hydrolase/lysophospholipase,_and_DNA_primase_activity


id: CL:5259
description: Mostly uncharacterized, incl. Homologous recombination, and Amidine-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5259_Mostly_uncharacterized,_incl._Homologous_recombination,_and_Amidine-lyase_activity


id: CL:5261
description: Mostly uncharacterized, incl. Homologous recombination, and Amidine-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5261_Mostly_uncharacterized,_incl._Homologous_recombination,_and_Amidine-lyase_activity


id: CL:5263
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5263_Mostly_uncharacterized,_incl._Transferase_complex,_transferring_phosphorus-containing_groups,_and_Protein_of_unknown_function_DUF6103

description:
  Mostly uncharacterized, incl. Transferase complex, transferring phosphorus-containing groups, and Protein of unknown function DUF6103


id: CL:5265
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5265_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF6103,_and_DNA-templated_DNA_replication

description:
  Mostly uncharacterized, incl. Protein of unknown function DUF6103, and DNA-templated DNA replication


id: CL:5267
description: Mostly uncharacterized, incl. DNA primase activity, and PKD/Chitinase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5267_Mostly_uncharacterized,_incl._DNA_primase_activity,_and_PKD/Chitinase_domain


id: CL:5269
description: Mostly uncharacterized, incl. PKD/Chitinase domain, and Pilus assembly, Flp-type CpaB
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5269_Mostly_uncharacterized,_incl._PKD/Chitinase_domain,_and_Pilus_assembly,_Flp-type_CpaB


id: CL:5271
description: Mostly uncharacterized, incl. Pilus assembly, Flp-type CpaB, and Type IV leader peptidase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5271_Mostly_uncharacterized,_incl._Pilus_assembly,_Flp-type_CpaB,_and_Type_IV_leader_peptidase_family


id: CL:5275
description: Mixed, incl. Pilus assembly, Flp-type CpaB, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5275_Mixed,_incl._Pilus_assembly,_Flp-type_CpaB,_and_AAA_domain


id: CL:5299
description: Mixed, incl. DNA biosynthetic process, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5299_Mixed,_incl._DNA_biosynthetic_process,_and_Signal


id: CL:536
description: Mixed, incl. DNA repair, and DNA biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:536_Mixed,_incl._DNA_repair,_and_DNA_biosynthetic_process


id: CL:5362
description: Mixed, incl. Sodium, and YjbQ-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5362_Mixed,_incl._Sodium,_and_YjbQ-like_superfamily


id: CL:5374
description: Mixed, incl. DNA integration, and IstB-like ATP-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5374_Mixed,_incl._DNA_integration,_and_IstB-like_ATP-binding_protein


id: CL:5377
description: DNA integration, and IstB-like ATP-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5377_DNA_integration,_and_IstB-like_ATP-binding_protein


id: CL:5378
description: DNA integration, and IstB-like ATP-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5378_DNA_integration,_and_IstB-like_ATP-binding_protein


id: CL:5379
description: Pfam phage integrase family, and Regulation of RNA stability
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5379_Pfam_phage_integrase_family,_and_Regulation_of_RNA_stability


id: CL:538
description: Mismatch repair, and SOS response
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:538_Mismatch_repair,_and_SOS_response


id: CL:539
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:539_Mixed,_incl._SOS_response,_and_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity

description:
  Mixed, incl. SOS response, and DNA topoisomerase type I (single strand cut, ATP-independent) activity


id: CL:541
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:541_Mixed,_incl._3-5_DNA_helicase_activity,_and_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity

description:
  Mixed, incl. 3-5 DNA helicase activity, and DNA topoisomerase type I (single strand cut, ATP-independent) activity


id: CL:5419
description: Mixed, incl. Regulation of RNA stability, and Xylan catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5419_Mixed,_incl._Regulation_of_RNA_stability,_and_Xylan_catabolic_process


id: CL:5429
description: IstB-like ATP-binding protein, and DDE transposase retroviral integrase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5429_IstB-like_ATP-binding_protein,_and_DDE_transposase_retroviral_integrase_sub-family


id: CL:5431
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5431_IstB-like_ATP_binding_protein,_and_DNA_replication_protein_DnaC/insertion_sequence_putative_ATP-binding_protein

description:
  IstB-like ATP binding protein, and DNA replication protein DnaC/insertion sequence putative ATP-binding protein


id: CL:544
description: DNA topoisomerase, type IA, zn finger, and 3-5 DNA helicase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:544_DNA_topoisomerase,_type_IA,_zn_finger,_and_3-5_DNA_helicase_activity


id: CL:5445
description: DNA strand elongation, and DDE transposase retroviral integrase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5445_DNA_strand_elongation,_and_DDE_transposase_retroviral_integrase_sub-family


id: CL:5455
description: Mixed, incl. Transcription regulator PadR, N-terminal, and Response to pH
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5455_Mixed,_incl._Transcription_regulator_PadR,_N-terminal,_and_Response_to_pH


id: CL:5466
description: Mixed, incl. Alditol metabolic process, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5466_Mixed,_incl._Alditol_metabolic_process,_and_4Fe-4S_binding_domain


id: CL:5468
description: Mixed, incl. DegV, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5468_Mixed,_incl._DegV,_and_4Fe-4S_binding_domain


id: CL:5494
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5494_Mixed,_incl._Transposition,_and_Biological_process_involved_in_interspecies_interaction_between_organisms

description:
  Mixed, incl. Transposition, and Biological process involved in interspecies interaction between organisms


id: CL:5495
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5495_Mixed,_incl._Biological_process_involved_in_interspecies_interaction_between_organisms,_and_DNA_metabolic_process

description:
  Mixed, incl. Biological process involved in interspecies interaction between organisms, and DNA metabolic process


id: CL:5496
description: Mixed, incl. Defense response, and S-adenosyl-L-methionine-dependent methyltransferase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5496_Mixed,_incl._Defense_response,_and_S-adenosyl-L-methionine-dependent_methyltransferase_superfamily


id: CL:5497
description: Mixed, incl. Response to virus, and Nucleotidyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5497_Mixed,_incl._Response_to_virus,_and_Nucleotidyltransferase_domain


id: CL:5498
description: Mixed, incl. Response to virus, and RAMP superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5498_Mixed,_incl._Response_to_virus,_and_RAMP_superfamily


id: CL:5501
description: Response to virus, and DNA strand exchange activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5501_Response_to_virus,_and_DNA_strand_exchange_activity


id: CL:5503
description: Response to virus, and Maintenance of DNA repeat elements
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5503_Response_to_virus,_and_Maintenance_of_DNA_repeat_elements


id: CL:5524
description: Mixed, incl. RAMP superfamily, and Diguanylate cyclase, GGDEF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5524_Mixed,_incl._RAMP_superfamily,_and_Diguanylate_cyclase,_GGDEF_domain


id: CL:5527
description: RAMP superfamily, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5527_RAMP_superfamily,_and_Response_to_virus


id: CL:5543
description: Mixed, incl. Nucleotidyltransferase domain, and Protein of unknown function DUF499
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5543_Mixed,_incl._Nucleotidyltransferase_domain,_and_Protein_of_unknown_function_DUF499


id: CL:5544
description: Mixed, incl. Protein of unknown function DUF499, and Domain of unknown function DUF1156
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5544_Mixed,_incl._Protein_of_unknown_function_DUF499,_and_Domain_of_unknown_function_DUF1156


id: CL:5547
description: Mixed, incl. PLD-like domain, and Protein of unknown function DUF499
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5547_Mixed,_incl._PLD-like_domain,_and_Protein_of_unknown_function_DUF499


id: CL:5568
description: Polymerase, nucleotidyl transferase domain, and Toxin-antitoxin complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5568_Polymerase,_nucleotidyl_transferase_domain,_and_Toxin-antitoxin_complex


id: CL:5584
description: Mixed, incl. DNA modification, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5584_Mixed,_incl._DNA_modification,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:5585
description: Mixed, incl. DNA modification, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5585_Mixed,_incl._DNA_modification,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:5608
description: Mixed, incl. RRXRR domain, and UvrD-like helicase C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5608_Mixed,_incl._RRXRR_domain,_and_UvrD-like_helicase_C-terminal_domain


id: CL:5637
description: Mixed, incl. Putative transposase DNA-binding domain, and Nucleotide-excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5637_Mixed,_incl._Putative_transposase_DNA-binding_domain,_and_Nucleotide-excision_repair


id: CL:5638
description: Mixed, incl. Putative transposase DNA-binding domain, and Nucleotide-excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5638_Mixed,_incl._Putative_transposase_DNA-binding_domain,_and_Nucleotide-excision_repair


id: CL:5639
description: Mixed, incl. Putative transposase DNA-binding domain, and Transposase IS200 like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5639_Mixed,_incl._Putative_transposase_DNA-binding_domain,_and_Transposase_IS200_like


id: CL:5642
description: Putative transposase DNA-binding domain, and Transposase IS200 like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5642_Putative_transposase_DNA-binding_domain,_and_Transposase_IS200_like


id: CL:5656
description: Regulation of cell death, and Type II/IV secretion system protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5656_Regulation_of_cell_death,_and_Type_II/IV_secretion_system_protein


id: CL:5671
description: Nucleotide-excision repair, and Transposase, IS4-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5671_Nucleotide-excision_repair,_and_Transposase,_IS4-like


id: CL:5687
description: Mixed, incl. Helix-turn-helix domain, and Von Willebrand factor, type A
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5687_Mixed,_incl._Helix-turn-helix_domain,_and_Von_Willebrand_factor,_type_A


id: CL:5688
description: Mixed, incl. Von Willebrand factor, type A, and ATPase, dynein-related, AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5688_Mixed,_incl._Von_Willebrand_factor,_type_A,_and_ATPase,_dynein-related,_AAA_domain


id: CL:5703
description: Mixed, incl. Helix-turn-helix domain, and Type IV secretion system protein TraG/VirD4
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5703_Mixed,_incl._Helix-turn-helix_domain,_and_Type_IV_secretion_system_protein_TraG/VirD4


id: CL:5715
description: Mixed, incl. Transposase activity, and Monobactam biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5715_Mixed,_incl._Transposase_activity,_and_Monobactam_biosynthesis


id: CL:5716
description: Transposase activity, and Domain of unknown function DUF6431
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5716_Transposase_activity,_and_Domain_of_unknown_function_DUF6431


id: CL:5717
description: Transposase activity, and Domain of unknown function DUF6431
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5717_Transposase_activity,_and_Domain_of_unknown_function_DUF6431


id: CL:5718
description: Transposase activity, and Domain of unknown function DUF6431
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5718_Transposase_activity,_and_Domain_of_unknown_function_DUF6431


id: CL:572
description: DNA excision, and UvrD/REP helicase N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:572_DNA_excision,_and_UvrD/REP_helicase_N-terminal_domain


id: CL:5721
description: DEDD transposase family, and Transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5721_DEDD_transposase_family,_and_Transposase_sub-family


id: CL:5723
description: Transposase sub-family, and Transposase, IS111A/IS1328/IS1533, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5723_Transposase_sub-family,_and_Transposase,_IS111A/IS1328/IS1533,_N-terminal


id: CL:5748
description: Monobactam biosynthesis, and Homeobox
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5748_Monobactam_biosynthesis,_and_Homeobox


id: CL:5765
description: Transposase, IS116/IS110/IS902, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5765_Transposase,_IS116/IS110/IS902,_and_Transposase_activity


id: CL:5783
description: Transposase domain (DUF772), and RRXRR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5783_Transposase_domain_(DUF772),_and_RRXRR_domain


id: CL:5797
description: Mixed, incl. Ferritin-like superfamily, and Pyridine nucleotide-disulphide oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5797_Mixed,_incl._Ferritin-like_superfamily,_and_Pyridine_nucleotide-disulphide_oxidoreductase


id: CL:5811
description: Mostly uncharacterized, incl. Helix-turn-helix XRE-family like proteins, and FAD dependent protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5811_Mostly_uncharacterized,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_FAD_dependent_protein


id: CL:5812
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5812_Mostly_uncharacterized,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Lipopolysaccharide_biosynthesis

description:
  Mostly uncharacterized, incl. Helix-turn-helix XRE-family like proteins, and Lipopolysaccharide biosynthesis


id: CL:5813
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5813_Mostly_uncharacterized,_incl._Lipopolysaccharide_biosynthesis,_and_Helix-turn-helix_XRE-family_like_proteins

description:
  Mostly uncharacterized, incl. Lipopolysaccharide biosynthesis, and Helix-turn-helix XRE-family like proteins


id: CL:5814
description: Mostly uncharacterized, incl. Helix-turn-helix XRE-family like proteins, and Primosome complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5814_Mostly_uncharacterized,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Primosome_complex


id: CL:5815
description: Mostly uncharacterized, incl. Helix-turn-helix XRE-family like proteins, and Primosome complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5815_Mostly_uncharacterized,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Primosome_complex


id: CL:5817
description: Mostly uncharacterized, incl. Primosome complex, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5817_Mostly_uncharacterized,_incl._Primosome_complex,_and_AAA_domain


id: CL:5819
description: Mostly uncharacterized, incl. AAA domain, and Peptidoglycan binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5819_Mostly_uncharacterized,_incl._AAA_domain,_and_Peptidoglycan_binding


id: CL:5821
description: Mostly uncharacterized, incl. AAA domain, and Peptidoglycan binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5821_Mostly_uncharacterized,_incl._AAA_domain,_and_Peptidoglycan_binding


id: CL:5822
description: Mostly uncharacterized, incl. Extracellular region, and Proteolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5822_Mostly_uncharacterized,_incl._Extracellular_region,_and_Proteolysis


id: CL:5843
description: Mixed, incl. AAA domain, and Peptidoglycan binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5843_Mixed,_incl._AAA_domain,_and_Peptidoglycan_binding


id: CL:5868
description: Mixed, incl. DNA strand elongation, and Primosome complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5868_Mixed,_incl._DNA_strand_elongation,_and_Primosome_complex


id: CL:587
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:587_DNA_polymerase_III,_clamp_loader_complex,_gamma/delta/delta_subunit,_C-terminal,_and_Helix-hairpin-helix_motif

description:
  DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal, and Helix-hairpin-helix motif


id: CL:5887
description: Mostly uncharacterized, incl. RNA-directed DNA polymerase, and Histidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5887_Mostly_uncharacterized,_incl._RNA-directed_DNA_polymerase,_and_Histidine_metabolism


id: CL:5911
description: Mixed, incl. Catalase activity, and Sodium/calcium exchanger protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5911_Mixed,_incl._Catalase_activity,_and_Sodium/calcium_exchanger_protein


id: CL:5923
description: Helix-turn-helix XRE-family like proteins, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5923_Helix-turn-helix_XRE-family_like_proteins,_and_Coiled_coil


id: CL:5933
description: Mixed, incl. FAD dependent protein, and Chitin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5933_Mixed,_incl._FAD_dependent_protein,_and_Chitin_binding


id: CL:5936
description: Mixed, incl. Chitin binding, and YfcE-like, metallophosphatase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5936_Mixed,_incl._Chitin_binding,_and_YfcE-like,_metallophosphatase_domain


id: CL:5952
description: Mixed, incl. Oligopeptide transport, and Aminopeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5952_Mixed,_incl._Oligopeptide_transport,_and_Aminopeptidase


id: CL:5964
description: Mixed, incl. Mycobacterial 4 TMS phage holin, superfamily IV, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5964_Mixed,_incl._Mycobacterial_4_TMS_phage_holin,_superfamily_IV,_and_4Fe-4S_binding_domain


id: CL:5978
description: Mixed, incl. Endonuclease/exonuclease/phosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:5978_Mixed,_incl._Endonuclease/exonuclease/phosphatase


id: CL:606
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:606_DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_Extracellular_matrix_regulatory_protein_A-like

description:
  DNA topoisomerase, type IIA-like domain superfamily, and Extracellular matrix regulatory protein A-like


id: CL:632
description: HhH-GPD domain, and Endonuclease/exonuclease/phosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:632_HhH-GPD_domain,_and_Endonuclease/exonuclease/phosphatase


id: CL:642
description: Mostly uncharacterized, incl. rRNA methyltransferase activity, and PASTA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:642_Mostly_uncharacterized,_incl._rRNA_methyltransferase_activity,_and_PASTA_domain


id: CL:644
description: Mixed, incl. rRNA methyltransferase activity, and PASTA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:644_Mixed,_incl._rRNA_methyltransferase_activity,_and_PASTA_domain


id: CL:645
description: rRNA methyltransferase activity, and Formyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:645_rRNA_methyltransferase_activity,_and_Formyl_transferase


id: CL:654
description: Mixed, incl. PASTA domain, and Forkhead associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:654_Mixed,_incl._PASTA_domain,_and_Forkhead_associated_domain


id: CL:666
description: Mixed, incl. rRNA catabolic process, and Pantothenate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:666_Mixed,_incl._rRNA_catabolic_process,_and_Pantothenate_catabolic_process


id: CL:682
description: Mixed, incl. Nucleotide biosynthetic process, and Cellular modified amino acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:682_Mixed,_incl._Nucleotide_biosynthetic_process,_and_Cellular_modified_amino_acid_biosynthetic_process


id: CL:683
description: Nucleoside monophosphate metabolic process, and Pyrimidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:683_Nucleoside_monophosphate_metabolic_process,_and_Pyrimidine_metabolism


id: CL:684
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:684_Ribonucleoside_monophosphate_metabolic_process,_and_Threonyl/alanyl_tRNA_synthetase,_class_II-like,_putative_editing_domain_superfamily

description:
  Ribonucleoside monophosphate metabolic process, and Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily


id: CL:685
description: Ribonucleoside monophosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:685_Ribonucleoside_monophosphate_biosynthetic_process


id: CL:686
description: Purine nucleoside monophosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:686_Purine_nucleoside_monophosphate_biosynthetic_process


id: CL:688
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:688_De_novo_IMP_biosynthetic_process


id: CL:689
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:689_De_novo_IMP_biosynthetic_process


id: CL:700
description: Phosphoribosylformylglycinamidine synthase activity, and Formyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:700_Phosphoribosylformylglycinamidine_synthase_activity,_and_Formyl_transferase


id: CL:711
description: AMP metabolic process, and GMP biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:711_AMP_metabolic_process,_and_GMP_biosynthesis


id: CL:725
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity, and Amidohydrolase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:725_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity,_and_Amidohydrolase_family


id: CL:744
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:744_Mixed,_incl._Threonyl/alanyl_tRNA_synthetase,_class_II-like,_putative_editing_domain_superfamily,_and_UMP_salvage

description:
  Mixed, incl. Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily, and UMP salvage


id: CL:746
description: Mixed, incl. Peptidase S1C, and CbbX, AAA lid domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:746_Mixed,_incl._Peptidase_S1C,_and_CbbX,_AAA_lid_domain


id: CL:765
description: Pyrimidine nucleoside metabolic process, and UMP salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:765_Pyrimidine_nucleoside_metabolic_process,_and_UMP_salvage


id: CL:781
description: Mixed, incl. Deoxyribonucleotide biosynthetic process, and Peptidyl-glutamine methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:781_Mixed,_incl._Deoxyribonucleotide_biosynthetic_process,_and_Peptidyl-glutamine_methylation


id: CL:783
description: Mixed, incl. Telomere recombination, and Putative manganese efflux pump
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:783_Mixed,_incl._Telomere_recombination,_and_Putative_manganese_efflux_pump


id: CL:798
description: Deoxyribonucleotide biosynthetic process, and ATP-cone domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:798_Deoxyribonucleotide_biosynthetic_process,_and_ATP-cone_domain


id: CL:811
description: Mixed, incl. Pyridine nucleotide metabolic process, and Riboflavin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:811_Mixed,_incl._Pyridine_nucleotide_metabolic_process,_and_Riboflavin_metabolic_process


id: CL:812
description: Mixed, incl. Pyridine nucleotide metabolic process, and Riboflavin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:812_Mixed,_incl._Pyridine_nucleotide_metabolic_process,_and_Riboflavin_metabolic_process


id: CL:813
description: Pyridine nucleotide metabolic process, and NUDIX domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:813_Pyridine_nucleotide_metabolic_process,_and_NUDIX_domain


id: CL:815
description: Nicotinamide nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:815_Nicotinamide_nucleotide_biosynthetic_process


id: CL:838
description: Riboflavin metabolic process, and Folic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:838_Riboflavin_metabolic_process,_and_Folic_acid_metabolic_process


id: CL:84
description: Mixed, incl. Translation, and Protein export
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:84_Mixed,_incl._Translation,_and_Protein_export


id: CL:857
description: Mixed, incl. Pantothenate biosynthesis, and Quinolinate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:857_Mixed,_incl._Pantothenate_biosynthesis,_and_Quinolinate_metabolic_process


id: CL:859
description: Pantothenate biosynthesis, and Quinolinate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:859_Pantothenate_biosynthesis,_and_Quinolinate_metabolic_process


id: CL:87
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:87_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:88
description: Mixed, incl. Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:88_Mixed,_incl._Ribosome,_and_Regulation_of_translation


id: CL:889
description: Mostly uncharacterized, incl. CarD-like/TRCF domain, and Nucleoside triphosphate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:889_Mostly_uncharacterized,_incl._CarD-like/TRCF_domain,_and_Nucleoside_triphosphate_catabolic_process


id: CL:89
description: Mixed, incl. Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:89_Mixed,_incl._Ribosome,_and_Regulation_of_translation


id: CL:890
description: Mostly uncharacterized, incl. UTP metabolic process, and CarD-like/TRCF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:890_Mostly_uncharacterized,_incl._UTP_metabolic_process,_and_CarD-like/TRCF_domain


id: CL:892
description: Mixed, incl. DUF34/NIF3 superfamily, and tRNA (adenine-N1-)-methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:892_Mixed,_incl._DUF34/NIF3_superfamily,_and_tRNA_(adenine-N1-)-methyltransferase_activity


id: CL:90
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:90_Ribosome,_and_Regulation_of_translation


id: CL:902
description: Mixed, incl. UTP metabolic process, and CarD-like/TRCF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:902_Mixed,_incl._UTP_metabolic_process,_and_CarD-like/TRCF_domain


id: CL:91
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:91_Ribosome,_and_Translation_regulator_activity


id: CL:913
description: Mixed, incl. Sigma-70, region 4, and Ribonuclease III family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:913_Mixed,_incl._Sigma-70,_region_4,_and_Ribonuclease_III_family


id: CL:930
description: Mixed, incl. glycyl-tRNA aminoacylation, and RidA family
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:930_Mixed,_incl._glycyl-tRNA_aminoacylation,_and_RidA_family


id: CL:932
description: Mixed, incl. RNA ligase activity, and dGTP catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:932_Mixed,_incl._RNA_ligase_activity,_and_dGTP_catabolic_process


id: CL:94
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:94_Ribosome,_and_Translation_regulator_activity


id: CL:95
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:95_Ribosome,_and_Translation_regulator_activity


id: CL:952
description: Mixed, incl. Ppx/GppA phosphatase, and TGS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:952_Mixed,_incl._Ppx/GppA_phosphatase,_and_TGS_domain


id: CL:966
description: Mixed, incl. Queuosine biosynthesis, and Holliday junction helicase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:966_Mixed,_incl._Queuosine_biosynthesis,_and_Holliday_junction_helicase_complex


id: CL:969
description: Queuosine biosynthesis, and Holliday junction helicase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:969_Queuosine_biosynthesis,_and_Holliday_junction_helicase_complex


id: CL:98
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:98_Ribosome,_and_Translation_regulator_activity


id: CL:991
description: Mixed, incl. Chromosome segregation, and Cysteine and methionine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:991_Mixed,_incl._Chromosome_segregation,_and_Cysteine_and_methionine_metabolism


id: CL:992
description: Mixed, incl. Sister chromatid cohesion, and Chromosome partition
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:992_Mixed,_incl._Sister_chromatid_cohesion,_and_Chromosome_partition


id: CL:994
description: Mixed, incl. Chromosome partition, and Peptidase family M50
name:
  Local Network Cluster (STRING).STRING_v12.0_1121429_STRINGid_CL:994_Mixed,_incl._Chromosome_partition,_and_Peptidase_family_M50


id: GO:0000701
description: Purine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0000701
golevel: 7
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0000701_Purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 10
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000724
description: Double-strand break repair via homologous recombination
memo: https://amigo.geneontology.org/amigo/term/GO:0000724
golevel: 9
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0000724_Double-strand_break_repair_via_homologous_recombination


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003864
description: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003864
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0003864_3-methyl-2-oxobutanoate_hydroxymethyltransferase_activity


id: GO:0003882
description: CDP-diacylglycerol-serine O-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003882
golevel: 6
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0003882_CDP-diacylglycerol-serine_O-phosphatidyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 6
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0003992
description: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003992
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0003992_N2-acetyl-L-ornithine:2-oxoglutarate_5-aminotransferase_activity


id: GO:0004015
description: adenosylmethionine-8-amino-7-oxononanoate transaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004015
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0004015_adenosylmethionine-8-amino-7-oxononanoate_transaminase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004081
description: bis(5-nucleosyl)-tetraphosphatase (asymmetrical) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004081
golevel: 7
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0004081_bis(5-nucleosyl)-tetraphosphatase_(asymmetrical)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
golevel: 6
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004471
description: Malate dehydrogenase (decarboxylating) (NAD+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004471
golevel: 6
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0004471_Malate_dehydrogenase_(decarboxylating)_(NAD+)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 6
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004489
description: Methylenetetrahydrofolate reductase (NAD(P)H) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004489
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0004489_Methylenetetrahydrofolate_reductase_(NAD(P)H)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0005315
description: Inorganic phosphate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005315
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0005315_Inorganic_phosphate_transmembrane_transporter_activity


id: GO:0005477
description: Pyruvate secondary active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005477
golevel: 7
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0005477_Pyruvate_secondary_active_transmembrane_transporter_activity


id: GO:0006303
description: Double-strand break repair via nonhomologous end joining
memo: https://amigo.geneontology.org/amigo/term/GO:0006303
golevel: 9
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0006303_Double-strand_break_repair_via_nonhomologous_end_joining


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 11
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0007157
description: Heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
memo: https://amigo.geneontology.org/amigo/term/GO:0007157
golevel: 5
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0007157_Heterophilic_cell-cell_adhesion_via_plasma_membrane_cell_adhesion_molecules


id: GO:0008028
description: Monocarboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008028
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0008028_Monocarboxylic_acid_transmembrane_transporter_activity


id: GO:0008271
description: Secondary active sulfate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008271
golevel: 6
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0008271_Secondary_active_sulfate_transmembrane_transporter_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 7
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008686
description: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008686
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0008686_3,4-dihydroxy-2-butanone-4-phosphate_synthase_activity


id: GO:0008690
description: 3-deoxy-manno-octulosonate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008690
golevel: 6
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0008690_3-deoxy-manno-octulosonate_cytidylyltransferase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
golevel: 6
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008780
description: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008780
golevel: 6
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0008780_acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine_O-acyltransferase_activity


id: GO:0008817
description: cob(I)yrinic acid a,c-diamide adenosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008817
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0008817_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: GO:0008825
description: Cyclopropane-fatty-acyl-phospholipid synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008825
golevel: 6
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0008825_Cyclopropane-fatty-acyl-phospholipid_synthase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008939
description: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008939
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0008939_Nicotinate-nucleotide-dimethylbenzimidazole_phosphoribosyltransferase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 6
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 9
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 9
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009139
description: Pyrimidine nucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009139
golevel: 9
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0009139_Pyrimidine_nucleoside_diphosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 9
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009157
description: Deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009157
golevel: 9
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0009157_Deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 10
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 9
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 10
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009175
description: Pyrimidine ribonucleoside monophosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009175
golevel: 10
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0009175_Pyrimidine_ribonucleoside_monophosphate_catabolic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 9
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 10
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 9
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 10
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 10
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 9
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 10
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009210
description: Pyrimidine ribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009210
golevel: 10
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0009210_Pyrimidine_ribonucleoside_triphosphate_catabolic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 9
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 10
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 10
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 9
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 10
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009401
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system
memo: https://amigo.geneontology.org/amigo/term/GO:0009401
golevel: 8
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0009401_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 6
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 6
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 6
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0010604
description: Positive regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010604
golevel: 5
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0010604_Positive_regulation_of_macromolecule_metabolic_process


id: GO:0010605
description: Negative regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010605
golevel: 5
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0010605_Negative_regulation_of_macromolecule_metabolic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
golevel: 3
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015355
description: Secondary active monocarboxylate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015355
golevel: 6
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0015355_Secondary_active_monocarboxylate_transmembrane_transporter_activity


id: GO:0015415
description: ATPase-coupled phosphate ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015415
golevel: 7
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0015415_ATPase-coupled_phosphate_ion_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015658
description: Branched-chain amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015658
golevel: 6
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0015658_Branched-chain_amino_acid_transmembrane_transporter_activity


id: GO:0015975
description: Energy derivation by oxidation of reduced inorganic compounds
memo: https://amigo.geneontology.org/amigo/term/GO:0015975
golevel: 4
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0015975_Energy_derivation_by_oxidation_of_reduced_inorganic_compounds


id: GO:0015988
description: Energy coupled proton transmembrane transport, against electrochemical gradient
memo: https://amigo.geneontology.org/amigo/term/GO:0015988
golevel: 8
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0015988_Energy_coupled_proton_transmembrane_transport,_against_electrochemical_gradient


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016625
memo: https://amigo.geneontology.org/amigo/term/GO:0016625
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016625_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_iron-sulfur_protein_as_acceptor

description:
  Oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016642
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016642
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016642_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_disulfide_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016699
description: Oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016699
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016699_Oxidoreductase_activity,_acting_on_hydrogen_as_donor,_iron-sulfur_protein_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016703
memo: https://amigo.geneontology.org/amigo/term/GO:0016703
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016703_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_one_atom_of_oxygen_(internal_monooxygenases_or_internal_mixed_function_oxidases)

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)


id: GO:0016705
memo: https://amigo.geneontology.org/amigo/term/GO:0016705
golevel: 3
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016705_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: GO:0016709
memo: https://amigo.geneontology.org/amigo/term/GO:0016709
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016709_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen


id: GO:0016721
description: Oxidoreductase activity, acting on superoxide radicals as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016721
golevel: 3
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016721_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016730
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016730
golevel: 3
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016730_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: GO:0016732
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors, dinitrogen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016732
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016732_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_dinitrogen_as_acceptor


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016773
description: Phosphotransferase activity, alcohol group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016773
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016773_Phosphotransferase_activity,_alcohol_group_as_acceptor


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
golevel: 6
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016837
description: Carbon-oxygen lyase activity, acting on polysaccharides
memo: https://amigo.geneontology.org/amigo/term/GO:0016837
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016837_Carbon-oxygen_lyase_activity,_acting_on_polysaccharides


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016856
description: Racemase and epimerase activity, acting on hydroxy acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016856
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016856_Racemase_and_epimerase_activity,_acting_on_hydroxy_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016862
description: Intramolecular oxidoreductase activity, interconverting keto- and enol-groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016862
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016862_Intramolecular_oxidoreductase_activity,_interconverting_keto-_and_enol-groups


id: GO:0016863
description: Intramolecular oxidoreductase activity, transposing C=C bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016863
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016863_Intramolecular_oxidoreductase_activity,_transposing_C=C_bonds


id: GO:0016867
description: Intramolecular transferase activity, transferring acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016867
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016867_Intramolecular_transferase_activity,_transferring_acyl_groups


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016869
description: Intramolecular transferase activity, transferring amino groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016869
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016869_Intramolecular_transferase_activity,_transferring_amino_groups


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016888
description: Endodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016888
golevel: 7
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016888_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016889
description: Endodeoxyribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016889
golevel: 7
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016889_Endodeoxyribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 7
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
golevel: 6
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016894
memo: https://amigo.geneontology.org/amigo/term/GO:0016894
golevel: 6
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016894_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_3-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 7
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016896
description: Exoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016896
golevel: 7
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016896_Exoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016901
memo: https://amigo.geneontology.org/amigo/term/GO:0016901
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016901_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0018339
description: peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid
memo: https://amigo.geneontology.org/amigo/term/GO:0018339
golevel: 8
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0018339_peptidyl-L-beta-methylthioaspartic_acid_biosynthetic_process_from_peptidyl-aspartic_acid


id: GO:0019171
description: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019171
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0019171_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 5
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019279
description: L-methionine biosynthetic process from L-homoserine via cystathionine
memo: https://amigo.geneontology.org/amigo/term/GO:0019279
golevel: 13
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0019279_L-methionine_biosynthetic_process_from_L-homoserine_via_cystathionine


id: GO:0019281
description: L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
memo: https://amigo.geneontology.org/amigo/term/GO:0019281
golevel: 14
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0019281_L-methionine_biosynthetic_process_from_homoserine_via_O-succinyl-L-homoserine_and_cystathionine


id: GO:0019288
description: Isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019288
golevel: 8
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0019288_Isopentenyl_diphosphate_biosynthetic_process,_methylerythritol_4-phosphate_pathway


id: GO:0019556
description: Histidine catabolic process to glutamate and formamide
memo: https://amigo.geneontology.org/amigo/term/GO:0019556
golevel: 10
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0019556_Histidine_catabolic_process_to_glutamate_and_formamide


id: GO:0019829
description: ATPase-coupled cation transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019829
golevel: 6
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0019829_ATPase-coupled_cation_transmembrane_transporter_activity


id: GO:0030435
description: Sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0030435
golevel: 3
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0030435_Sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0030604
description: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030604
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0030604_1-deoxy-D-xylulose-5-phosphate_reductoisomerase_activity


id: GO:0030613
description: Oxidoreductase activity, acting on phosphorus or arsenic in donors
memo: https://amigo.geneontology.org/amigo/term/GO:0030613
golevel: 3
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0030613_Oxidoreductase_activity,_acting_on_phosphorus_or_arsenic_in_donors


id: GO:0030614
description: Oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0030614
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0030614_Oxidoreductase_activity,_acting_on_phosphorus_or_arsenic_in_donors,_disulfide_as_acceptor


id: GO:0030698
description: 5,10-methylenetetrahydrofolate-dependent tRNA (m5U54) methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030698
golevel: 9
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0030698_5,10-methylenetetrahydrofolate-dependent_tRNA_(m5U54)_methyltransferase_activity


id: GO:0031234
description: Extrinsic component of cytoplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031234
golevel: 6
name:
  GOCC.STRING_v12.0_1121429_STRINGid_GO:0031234_Extrinsic_component_of_cytoplasmic_side_of_plasma_membrane


id: GO:0031250
description: Anaerobic ribonucleoside-triphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031250
golevel: 4
name:
  GOCC.STRING_v12.0_1121429_STRINGid_GO:0031250_Anaerobic_ribonucleoside-triphosphate_reductase_complex


id: GO:0031554
description: Regulation of DNA-templated transcription, termination
memo: https://amigo.geneontology.org/amigo/term/GO:0031554
golevel: 11
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0031554_Regulation_of_DNA-templated_transcription,_termination


id: GO:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
golevel: 3
name:
  GOCC.STRING_v12.0_1121429_STRINGid_GO:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GO:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
golevel: 3
name:
  GOCC.STRING_v12.0_1121429_STRINGid_GO:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GO:0033283
description: ATPase-coupled organic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033283
golevel: 6
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0033283_ATPase-coupled_organic_acid_transmembrane_transporter_activity


id: GO:0033284
description: ATPase-coupled carboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033284
golevel: 7
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0033284_ATPase-coupled_carboxylic_acid_transmembrane_transporter_activity


id: GO:0033362
description: Lysine biosynthetic process via diaminopimelate, diaminopimelate-aminotransferase pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0033362
golevel: 12
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0033362_Lysine_biosynthetic_process_via_diaminopimelate,_diaminopimelate-aminotransferase_pathway


id: GO:0033467
description: CMP-keto-3-deoxy-D-manno-octulosonic acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033467
golevel: 7
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0033467_CMP-keto-3-deoxy-D-manno-octulosonic_acid_metabolic_process


id: GO:0033468
description: CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033468
golevel: 8
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0033468_CMP-keto-3-deoxy-D-manno-octulosonic_acid_biosynthetic_process


id: GO:0033668
description: Negative regulation by symbiont of host apoptotic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033668
golevel: 8
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0033668_Negative_regulation_by_symbiont_of_host_apoptotic_process


id: GO:0033695
description: Oxidoreductase activity, acting on CH or CH2 groups, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0033695
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0033695_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_quinone_or_similar_compound_as_acceptor


id: GO:0033818
description: Beta-ketoacyl-acyl-carrier-protein synthase III activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033818
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0033818_Beta-ketoacyl-acyl-carrier-protein_synthase_III_activity


id: GO:0034023
description: 5-(carboxyamino)imidazole ribonucleotide mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034023
golevel: 4
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0034023_5-(carboxyamino)imidazole_ribonucleotide_mutase_activity


id: GO:0034036
description: Purine ribonucleoside bisphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034036
golevel: 10
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0034036_Purine_ribonucleoside_bisphosphate_biosynthetic_process


id: GO:0034249
description: Negative regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034249
golevel: 6
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0034249_Negative_regulation_of_cellular_amide_metabolic_process


id: GO:0034250
description: Positive regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034250
golevel: 6
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0034250_Positive_regulation_of_cellular_amide_metabolic_process


id: GO:0034404
description: Nucleobase-containing small molecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034404
golevel: 6
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0034404_Nucleobase-containing_small_molecule_biosynthetic_process


id: GO:0034639
description: L-amino acid efflux transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034639
golevel: 7
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0034639_L-amino_acid_efflux_transmembrane_transporter_activity


id: GO:0034656
description: Nucleobase-containing small molecule catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034656
golevel: 6
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0034656_Nucleobase-containing_small_molecule_catabolic_process


id: GO:0035592
description: Establishment of protein localization to extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0035592
golevel: 6
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0035592_Establishment_of_protein_localization_to_extracellular_region


id: GO:0035598
description: N6-threonylcarbomyladenosine methylthiotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0035598
golevel: 6
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0035598_N6-threonylcarbomyladenosine_methylthiotransferase_activity


id: GO:0035998
description: 7,8-dihydroneopterin 3-triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0035998
golevel: 6
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0035998_7,8-dihydroneopterin_3-triphosphate_biosynthetic_process


id: GO:0036361
description: Racemase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0036361
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0036361_Racemase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0036381
description: Pyridoxal 5-phosphate synthase (glutamine hydrolysing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0036381
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0036381_Pyridoxal_5-phosphate_synthase_(glutamine_hydrolysing)_activity


id: GO:0042083
description: 5,10-methylenetetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042083
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0042083_5,10-methylenetetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042084
description: 5-methyltetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042084
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0042084_5-methyltetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042173
description: Regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042173
golevel: 6
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0042173_Regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0042174
description: Negative regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042174
golevel: 7
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0042174_Negative_regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0042777
description: Proton motive force-driven plasma membrane ATP synthesis
memo: https://amigo.geneontology.org/amigo/term/GO:0042777
golevel: 13
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0042777_Proton_motive_force-driven_plasma_membrane_ATP_synthesis


id: GO:0043225
description: ATPase-coupled inorganic anion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043225
golevel: 6
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0043225_ATPase-coupled_inorganic_anion_transmembrane_transporter_activity


id: GO:0043242
description: Negative regulation of protein-containing complex disassembly
memo: https://amigo.geneontology.org/amigo/term/GO:0043242
golevel: 7
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0043242_Negative_regulation_of_protein-containing_complex_disassembly


id: GO:0043715
description: 2,3-diketo-5-methylthiopentyl-1-phosphate enolase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043715
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0043715_2,3-diketo-5-methylthiopentyl-1-phosphate_enolase_activity


id: GO:0043772
description: Acyl-phosphate glycerol-3-phosphate acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043772
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0043772_Acyl-phosphate_glycerol-3-phosphate_acyltransferase_activity


id: GO:0043811
description: Phosphate:acyl-[acyl carrier protein] acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043811
golevel: 5
name:
  GOMF.STRING_v12.0_1121429_STRINGid_GO:0043811_Phosphate:acyl-[acyl_carrier_protein]_acyltransferase_activity


id: GO:0044011
description: Single-species biofilm formation on inanimate substrate
memo: https://amigo.geneontology.org/amigo/term/GO:0044011
golevel: 7
name:
  GOBP.STRING_v12.0_1121429_STRINGid_GO:0044011_Single-species_biofilm_formation_on_inanimate_substrate


