# geneInfo

ensembl_gene_id: SAMN02745176_00005
symbol: prmC
gene_biotype: protein_coding
description:
  Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: SAMN02745176_00006
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: SAMN02745176_00010
symbol: SHI37760.1
gene_biotype: protein_coding
description:
  L-threonylcarbamoyladenylate synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: SAMN02745176_00011
symbol: SHI37784.1
gene_biotype: protein_coding
description:
  Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: SAMN02745176_00013
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: SAMN02745176_00016
symbol: SHI37881.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: SAMN02745176_00028
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: SAMN02745176_00034
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: SAMN02745176_00038
symbol: SHI38255.1
gene_biotype: protein_coding
description:
  Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: SAMN02745176_00048
symbol: recD2
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase, RecD/TraA family; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.


ensembl_gene_id: SAMN02745176_00056
symbol: fliW
gene_biotype: protein_coding
description:
  Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.


ensembl_gene_id: SAMN02745176_00057
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: SAMN02745176_00062
symbol: SHI38774.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.


ensembl_gene_id: SAMN02745176_00063
symbol: SHI38795.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: SAMN02745176_00064
symbol: SHI38819.1
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: SAMN02745176_00065
symbol: SHI38840.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: SAMN02745176_00072
symbol: SHI39032.1
gene_biotype: protein_coding
description:
  Flagellar capping protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: SAMN02745176_00076
symbol: hpf
gene_biotype: protein_coding
description:
  Putative sigma-54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: SAMN02745176_00084
symbol: secA
gene_biotype: protein_coding
description:
  Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: SAMN02745176_00085
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: SAMN02745176_00087
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: SAMN02745176_00088
symbol: SHI39400.1
gene_biotype: protein_coding
description:
  L-threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.


ensembl_gene_id: SAMN02745176_00097
symbol: SHI39606.1
gene_biotype: protein_coding
description:
  glutamate:Na+ symporter, ESS family; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family.


ensembl_gene_id: SAMN02745176_00102
symbol: SHI39692.1
gene_biotype: protein_coding
description:
  Riboflavin transporter FmnP; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family.


ensembl_gene_id: SAMN02745176_00104
symbol: SHI39739.1
gene_biotype: protein_coding
description:
  Ribosomal-protein-alanine acetyltransferase/tRNA threonylcarbamoyl adenosine modification protein YeaZ,TIGR03725.


ensembl_gene_id: SAMN02745176_00109
symbol: tsaD
gene_biotype: protein_coding
description:
  O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: SAMN02745176_00114
symbol: rex
gene_biotype: protein_coding
description:
  Redox-sensing transcriptional repressor; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: SAMN02745176_00116
symbol: SHI40007.1
gene_biotype: protein_coding
description:
  Oxaloacetate decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).


ensembl_gene_id: SAMN02745176_00121
symbol: SHI40119.1
gene_biotype: protein_coding
description:
  Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: SAMN02745176_00124
symbol: groS
gene_biotype: protein_coding
description:
  Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: SAMN02745176_00125
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: SAMN02745176_00126
symbol: moaC
gene_biotype: protein_coding
description:
  Cyclic pyranopterin monophosphate synthase subunit MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: SAMN02745176_00135
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: SAMN02745176_00163
symbol: SHI41084.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: SAMN02745176_00166
symbol: purE
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: SAMN02745176_00167
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: SAMN02745176_00169
symbol: purN
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: SAMN02745176_00183
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: SAMN02745176_00184
symbol: gatC
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: SAMN02745176_00185
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: SAMN02745176_00186
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: SAMN02745176_00204
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: SAMN02745176_00205
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: SAMN02745176_00206
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: SAMN02745176_00208
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent proteinase. Serine peptidase. MEROPS family S16; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: SAMN02745176_00209
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: SAMN02745176_00224
symbol: SHI42594.1
gene_biotype: protein_coding
description:
  Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.


ensembl_gene_id: SAMN02745176_00232
symbol: SHI42805.1
gene_biotype: protein_coding
description:
  Fur family transcriptional regulator, peroxide stress response regulator; Belongs to the Fur family.


ensembl_gene_id: SAMN02745176_00237
symbol: mntP
gene_biotype: protein_coding
description:
  Putative Mn2+ efflux pump MntP; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.


ensembl_gene_id: SAMN02745176_00240
symbol: SHI43000.1
gene_biotype: protein_coding
description:
  Poly-gamma-glutamate biosynthesis protein CapA/YwtB (capsule formation), metallophosphatase superfamily.


ensembl_gene_id: SAMN02745176_00252
symbol: ahcY
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: SAMN02745176_00253
symbol: mtaD
gene_biotype: protein_coding
description:
  5-methylthioadenosine/S-adenosylhomocysteine deaminase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family.


ensembl_gene_id: SAMN02745176_00264
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: SAMN02745176_00265
symbol: zupT
gene_biotype: protein_coding
description:
  Zinc transporter, ZIP family; Mediates zinc uptake. May also transport other divalent cations; Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily.


ensembl_gene_id: SAMN02745176_00266
symbol: SHI43576.1
gene_biotype: protein_coding
description:
  Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.


ensembl_gene_id: SAMN02745176_00270
symbol: ftsH
gene_biotype: protein_coding
description:
  Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: SAMN02745176_00289
symbol: SHI44129.1
gene_biotype: protein_coding
description:
  Superoxide dismutase, Cu-Zn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.


ensembl_gene_id: SAMN02745176_00311
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: SAMN02745176_00320
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: SAMN02745176_00326
symbol: SHI44945.1
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: SAMN02745176_00361
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: SAMN02745176_00368
symbol: larC
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family.


ensembl_gene_id: SAMN02745176_00422
symbol: SHI47056.1
gene_biotype: protein_coding
description:
  2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family; Belongs to the 5'-nucleotidase family.


ensembl_gene_id: SAMN02745176_00427
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: SAMN02745176_00436
symbol: SHI47336.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein, PAAT family (TC 3.A.1.3.-); Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: SAMN02745176_00448
symbol: SHI50073.1
gene_biotype: protein_coding
description:
  4Fe-4S dicluster domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: SAMN02745176_00450
symbol: rsmI
gene_biotype: protein_coding
description:
  16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: SAMN02745176_00462
symbol: sbcD
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: SAMN02745176_00476
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: SAMN02745176_00479
symbol: rnmV
gene_biotype: protein_coding
description:
  Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.


ensembl_gene_id: SAMN02745176_00480
symbol: rsmA
gene_biotype: protein_coding
description:
  16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: SAMN02745176_00482
symbol: rodA
gene_biotype: protein_coding
description:
  Rod shape determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: SAMN02745176_00489
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N7-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: SAMN02745176_00490
symbol: SHI51073.1
gene_biotype: protein_coding
description:
  Na+/H+-dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: SAMN02745176_00494
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: SAMN02745176_00521
symbol: SHI51874.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: SAMN02745176_00530
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: SAMN02745176_00552
symbol: prsA
gene_biotype: protein_coding
description:
  Foldase protein PrsA; Plays a major role in protein secretion by helping the post- translocational extracellular folding of several secreted proteins.


ensembl_gene_id: SAMN02745176_00558
symbol: SHI52766.1
gene_biotype: protein_coding
description:
  Alginate O-acetyltransferase complex protein AlgI; Belongs to the membrane-bound acyltransferase family.


ensembl_gene_id: SAMN02745176_00566
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: SAMN02745176_00589
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: SAMN02745176_00593
symbol: SHI53610.1
gene_biotype: protein_coding
description:
  NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.


ensembl_gene_id: SAMN02745176_00616
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: SAMN02745176_00617
symbol: speD
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 2 subfamily.


ensembl_gene_id: SAMN02745176_00626
symbol: macB
gene_biotype: protein_coding
description:
  Putative ABC transport system ATP-binding protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.


ensembl_gene_id: SAMN02745176_00641
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: SAMN02745176_00643
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: SAMN02745176_00649
symbol: pepA
gene_biotype: protein_coding
description:
  Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: SAMN02745176_00663
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: SAMN02745176_00689
symbol: SHI58246.1
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: SAMN02745176_00693
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.


ensembl_gene_id: SAMN02745176_00698
symbol: potA
gene_biotype: protein_coding
description:
  Spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.


ensembl_gene_id: SAMN02745176_00704
symbol: SHI58605.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745176_00705
symbol: SHI58634.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-); Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745176_00729
symbol: SHI59220.1
gene_biotype: protein_coding
description:
  Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN02745176_00737
symbol: folD
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: SAMN02745176_00741
symbol: mtnA
gene_biotype: protein_coding
description:
  Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: SAMN02745176_00742
symbol: SHI59524.1
gene_biotype: protein_coding
description:
  Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SAMN02745176_00748
symbol: cobT
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: SAMN02745176_00750
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: SAMN02745176_00752
symbol: cobD
gene_biotype: protein_coding
description:
  Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: SAMN02745176_00756
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.


ensembl_gene_id: SAMN02745176_00766
symbol: SHI60111.1
gene_biotype: protein_coding
description:
  Ribosomal small subunit pseudouridine synthase A; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: SAMN02745176_00771
symbol: sigI
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily.


ensembl_gene_id: SAMN02745176_00779
symbol: clpB
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: SAMN02745176_00781
symbol: SHI60442.1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridine955/2504/2580 synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: SAMN02745176_00788
symbol: SHI60615.1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridine1911/1915/1917 synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: SAMN02745176_00832
symbol: SHI61698.1
gene_biotype: protein_coding
description:
  methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: SAMN02745176_00840
symbol: nth
gene_biotype: protein_coding
description:
  DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: SAMN02745176_00844
symbol: atpE
gene_biotype: protein_coding
description:
  V/A-type H+-transporting ATPase subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: SAMN02745176_00846
symbol: atpF
gene_biotype: protein_coding
description:
  V/A-type H+-transporting ATPase subunit F; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: SAMN02745176_00847
symbol: atpA
gene_biotype: protein_coding
description:
  V/A-type H+-transporting ATPase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: SAMN02745176_00848
symbol: atpB
gene_biotype: protein_coding
description:
  V/A-type H+-transporting ATPase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.


ensembl_gene_id: SAMN02745176_00849
symbol: atpD
gene_biotype: protein_coding
description:
  V/A-type H+-transporting ATPase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: SAMN02745176_00850
symbol: lgt
gene_biotype: protein_coding
description:
  Phosphatidylglycerol:prolipoprotein diacylglycerol transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: SAMN02745176_00852
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA (cytosine1402-N4)-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: SAMN02745176_00855
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: SAMN02745176_00856
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: SAMN02745176_00857
symbol: mraY
gene_biotype: protein_coding
description:
  Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: SAMN02745176_00858
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: SAMN02745176_00860
symbol: murG
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: SAMN02745176_00861
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: SAMN02745176_00866
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: SAMN02745176_00868
symbol: SHI62571.1
gene_biotype: protein_coding
description:
  Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.


ensembl_gene_id: SAMN02745176_00869
symbol: SHI62597.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 29 subunit, SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02745176_00870
symbol: SHI62624.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma subunit, RpsG/SigG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02745176_00872
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: SAMN02745176_00880
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1); Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: SAMN02745176_00883
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: SAMN02745176_00884
symbol: plsY
gene_biotype: protein_coding
description:
  Acyl-phosphate glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: SAMN02745176_00885
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol 3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN02745176_00886
symbol: SHI63001.1
gene_biotype: protein_coding
description:
  Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.


ensembl_gene_id: SAMN02745176_00940
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: SAMN02745176_00941
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: SAMN02745176_00949
symbol: hypA
gene_biotype: protein_coding
description:
  Hydrogenase nickel incorporation protein HypA/HybF; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.


ensembl_gene_id: SAMN02745176_00976
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: SAMN02745176_00981
symbol: SHI67476.1
gene_biotype: protein_coding
description:
  Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.


ensembl_gene_id: SAMN02745176_00987
symbol: cbiM
gene_biotype: protein_coding
description:
  Cobalt/nickel transport system permease protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.


ensembl_gene_id: SAMN02745176_00988
symbol: cbiN
gene_biotype: protein_coding
description:
  Cobalt/nickel transport protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.


ensembl_gene_id: SAMN02745176_00990
symbol: SHI67664.1
gene_biotype: protein_coding
description:
  Cobalt/nickel transport system ATP-binding protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.


ensembl_gene_id: SAMN02745176_00992
symbol: cbiD
gene_biotype: protein_coding
description:
  Cobalt-precorrin 5B C1-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.


ensembl_gene_id: SAMN02745176_01000
symbol: cbiA
gene_biotype: protein_coding
description:
  Hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: SAMN02745176_01001
symbol: cobQ
gene_biotype: protein_coding
description:
  Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: SAMN02745176_01004
symbol: SHI67987.1
gene_biotype: protein_coding
description:
  Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.


ensembl_gene_id: SAMN02745176_01026
symbol: cheB
gene_biotype: protein_coding
description:
  Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: SAMN02745176_01060
symbol: SHI69328.1
gene_biotype: protein_coding
description:
  Cell division protein FtsX; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: SAMN02745176_01065
symbol: psuG
gene_biotype: protein_coding
description:
  Pseudouridine-5'-phosphate glycosidase; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family.


ensembl_gene_id: SAMN02745176_01066
symbol: ychF
gene_biotype: protein_coding
description:
  Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: SAMN02745176_01074
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: SAMN02745176_01090
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: SAMN02745176_01093
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: SAMN02745176_01096
symbol: SHI70278.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.


ensembl_gene_id: SAMN02745176_01099
symbol: selA
gene_biotype: protein_coding
description:
  L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.


ensembl_gene_id: SAMN02745176_01111
symbol: gpr
gene_biotype: protein_coding
description:
  Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.


ensembl_gene_id: SAMN02745176_01114
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: SAMN02745176_01115
symbol: SHI70798.1
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen-3 oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: SAMN02745176_01116
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: SAMN02745176_01117
symbol: grpE
gene_biotype: protein_coding
description:
  Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...]


ensembl_gene_id: SAMN02745176_01119
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: SAMN02745176_01120
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: SAMN02745176_01121
symbol: SHI70939.1
gene_biotype: protein_coding
description:
  16S rRNA (uracil1498-N3)-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: SAMN02745176_01137
symbol: aroD
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family.


ensembl_gene_id: SAMN02745176_01142
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: SAMN02745176_01147
symbol: SHI73534.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: SAMN02745176_01163
symbol: SHI73882.1
gene_biotype: protein_coding
description:
  Carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-); Belongs to the ABC transporter superfamily.


ensembl_gene_id: SAMN02745176_01209
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: SAMN02745176_01212
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: SAMN02745176_01213
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: SAMN02745176_01214
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: SAMN02745176_01236
symbol: SHI75525.1
gene_biotype: protein_coding
description:
  2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.


ensembl_gene_id: SAMN02745176_01238
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: SAMN02745176_01239
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: SAMN02745176_01283
symbol: SHI76477.1
gene_biotype: protein_coding
description:
  Non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: SAMN02745176_01284
symbol: rph
gene_biotype: protein_coding
description:
  RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: SAMN02745176_01287
symbol: SHI76583.1
gene_biotype: protein_coding
description:
  Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: SAMN02745176_01327
symbol: rplM
gene_biotype: protein_coding
description:
  LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: SAMN02745176_01328
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: SAMN02745176_01329
symbol: ecfT
gene_biotype: protein_coding
description:
  Energy-coupling factor transport system permease protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: SAMN02745176_01330
symbol: ecfA
gene_biotype: protein_coding
description:
  Energy-coupling factor transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: SAMN02745176_01333
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN02745176_01334
symbol: rpsD
gene_biotype: protein_coding
description:
  SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: SAMN02745176_01335
symbol: rpsK
gene_biotype: protein_coding
description:
  SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: SAMN02745176_01336
symbol: rpsM
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: SAMN02745176_01337
symbol: infA
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 1 (bIF-1); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: SAMN02745176_01339
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: SAMN02745176_01340
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: SAMN02745176_01341
symbol: secY
gene_biotype: protein_coding
description:
  Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: SAMN02745176_01342
symbol: rplO
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: SAMN02745176_01344
symbol: rpsE
gene_biotype: protein_coding
description:
  SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: SAMN02745176_01345
symbol: rplR
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: SAMN02745176_01346
symbol: rplF
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: SAMN02745176_01347
symbol: rpsH
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: SAMN02745176_01348
symbol: rpsZ
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: SAMN02745176_01349
symbol: rplE
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: SAMN02745176_01350
symbol: rplX
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: SAMN02745176_01351
symbol: rplN
gene_biotype: protein_coding
description:
  LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: SAMN02745176_01352
symbol: rpsQ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: SAMN02745176_01354
symbol: rplP
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: SAMN02745176_01355
symbol: rpsC
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: SAMN02745176_01356
symbol: rplV
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: SAMN02745176_01357
symbol: rpsS
gene_biotype: protein_coding
description:
  SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: SAMN02745176_01358
symbol: rplB
gene_biotype: protein_coding
description:
  LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: SAMN02745176_01359
symbol: rplW
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: SAMN02745176_01361
symbol: rplC
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: SAMN02745176_01362
symbol: rpsJ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: SAMN02745176_01363
symbol: tuf
gene_biotype: protein_coding
description:
  Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: SAMN02745176_01371
symbol: SHI79544.1
gene_biotype: protein_coding
description:
  NagD protein; Catalyzes the dephosphorylation of 2-6 carbon acid sugars in vitro; Belongs to the HAD-like hydrolase superfamily. NagD family.


ensembl_gene_id: SAMN02745176_01380
symbol: SHI79728.1
gene_biotype: protein_coding
description:
  RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN02745176_01381
symbol: SHI79743.1
gene_biotype: protein_coding
description:
  Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN02745176_01392
symbol: SHI79969.1
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: SAMN02745176_01427
symbol: ileS
gene_biotype: protein_coding
description:
  Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.


ensembl_gene_id: SAMN02745176_01443
symbol: addB
gene_biotype: protein_coding
description:
  DNA helicase/exodeoxyribonuclease V, subunit B; ATP-dependent DNA helicase; Belongs to the helicase family. AddB/RexB type 1 subfamily.


ensembl_gene_id: SAMN02745176_01496
symbol: SHI81988.1
gene_biotype: protein_coding
description:
  CRISPR-associated endoribonuclease Cas6; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA).


ensembl_gene_id: SAMN02745176_01503
symbol: SHI82143.1
gene_biotype: protein_coding
description:
  CRISPR-associated exonuclease, Cas4 family; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.


ensembl_gene_id: SAMN02745176_01504
symbol: cas1
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Cas1 family; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: SAMN02745176_01505
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Cas2 family; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: SAMN02745176_01551
symbol: SHI84519.1
gene_biotype: protein_coding
description:
  5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: SAMN02745176_01562
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA-adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN02745176_01573
symbol: SHI85047.1
gene_biotype: protein_coding
description:
  Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family.


ensembl_gene_id: SAMN02745176_01577
symbol: SHI85149.1
gene_biotype: protein_coding
description:
  Thiaminase (transcriptional activator TenA); Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family.


ensembl_gene_id: SAMN02745176_01618
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: SAMN02745176_01620
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).


ensembl_gene_id: SAMN02745176_01623
symbol: SHI86120.1
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SAMN02745176_01677
symbol: ybeY
gene_biotype: protein_coding
description:
  Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: SAMN02745176_01679
symbol: SHI88554.1
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN02745176_01680
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: SAMN02745176_01687
symbol: SHI88711.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: SAMN02745176_01694
symbol: SHI88856.1
gene_biotype: protein_coding
description:
  Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745176_01712
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: SAMN02745176_01713
symbol: sigA
gene_biotype: protein_coding
description:
  RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: SAMN02745176_01717
symbol: SHI89333.1
gene_biotype: protein_coding
description:
  Dinuclear metal center protein, YbgI/SA1388 family; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.


ensembl_gene_id: SAMN02745176_01726
symbol: crcB
gene_biotype: protein_coding
description:
  CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: SAMN02745176_01750
symbol: prfC
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 3 (bRF-3); Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: SAMN02745176_01759
symbol: SHI90185.1
gene_biotype: protein_coding
description:
  Putative phosphotransacetylase; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.


ensembl_gene_id: SAMN02745176_01760
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: SAMN02745176_01769
symbol: iscS
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.


ensembl_gene_id: SAMN02745176_01771
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA-specific 2-thiouridylase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: SAMN02745176_01775
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: SAMN02745176_01778
symbol: SHI91742.1
gene_biotype: protein_coding
description:
  Putative holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: SAMN02745176_01782
symbol: rnj
gene_biotype: protein_coding
description:
  Ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: SAMN02745176_01786
symbol: mltG
gene_biotype: protein_coding
description:
  UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: SAMN02745176_01800
symbol: SHI92278.1
gene_biotype: protein_coding
description:
  Type 4 prepilin peptidase 1 Aspartic peptidase. MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: SAMN02745176_01810
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: SAMN02745176_01812
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: SAMN02745176_01827
symbol: nusB
gene_biotype: protein_coding
description:
  NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: SAMN02745176_01829
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: SAMN02745176_01830
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: SAMN02745176_01833
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: SAMN02745176_01835
symbol: nadK
gene_biotype: protein_coding
description:
  NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: SAMN02745176_01837
symbol: SHI93125.1
gene_biotype: protein_coding
description:
  DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA.


ensembl_gene_id: SAMN02745176_01839
symbol: SHI93173.1
gene_biotype: protein_coding
description:
  Two-component system, response regulator, stage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.


ensembl_gene_id: SAMN02745176_01843
symbol: xerC
gene_biotype: protein_coding
description:
  Integrase/recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: SAMN02745176_01844
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: SAMN02745176_01845
symbol: SHI93318.1
gene_biotype: protein_coding
description:
  Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: SAMN02745176_01850
symbol: scpA
gene_biotype: protein_coding
description:
  Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: SAMN02745176_01851
symbol: scpB
gene_biotype: protein_coding
description:
  Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: SAMN02745176_01859
symbol: surE
gene_biotype: protein_coding
description:
  5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: SAMN02745176_01870
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: SAMN02745176_01877
symbol: SHI94021.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-); Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745176_01881
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: SAMN02745176_01882
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: SAMN02745176_01883
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: SAMN02745176_01884
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: SAMN02745176_01885
symbol: hfq
gene_biotype: protein_coding
description:
  Host factor-I protein; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: SAMN02745176_01888
symbol: lexA
gene_biotype: protein_coding
description:
  SOS-response transcriptional repressor, LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: SAMN02745176_01902
symbol: azoR
gene_biotype: protein_coding
description:
  FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.


ensembl_gene_id: SAMN02745176_01906
symbol: SHI95759.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains.


ensembl_gene_id: SAMN02745176_01922
symbol: potA-2
gene_biotype: protein_coding
description:
  Spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: SAMN02745176_01940
symbol: SHI96540.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter membrane protein 1, PhoT family; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: SAMN02745176_01942
symbol: pstB-2
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: SAMN02745176_01954
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: SAMN02745176_01955
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: SAMN02745176_01956
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: SAMN02745176_01958
symbol: hisH
gene_biotype: protein_coding
description:
  Glutamine amidotransferase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: SAMN02745176_01959
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.


ensembl_gene_id: SAMN02745176_01960
symbol: hisF
gene_biotype: protein_coding
description:
  Cyclase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: SAMN02745176_01967
symbol: SHI97168.1
gene_biotype: protein_coding
description:
  Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.


ensembl_gene_id: SAMN02745176_01989
symbol: SHI97660.1
gene_biotype: protein_coding
description:
  Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.


ensembl_gene_id: SAMN02745176_01999
symbol: SHI97855.1
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: SAMN02745176_02007
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-[acyl-carrier-protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: SAMN02745176_02008
symbol: nnrE
gene_biotype: protein_coding
description:
  NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of bot [...]


ensembl_gene_id: SAMN02745176_02010
symbol: SHI98064.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: SAMN02745176_02025
symbol: SHI98385.1
gene_biotype: protein_coding
description:
  N-acetylmannosaminyltransferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.


ensembl_gene_id: SAMN02745176_02031
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: SAMN02745176_02032
symbol: SHI98526.1
gene_biotype: protein_coding
description:
  Cell division transport system permease protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: SAMN02745176_02041
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.


ensembl_gene_id: SAMN02745176_02042
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: SAMN02745176_02059
symbol: rnfC
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.


ensembl_gene_id: SAMN02745176_02060
symbol: rnfD
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: SAMN02745176_02061
symbol: rnfG
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.


ensembl_gene_id: SAMN02745176_02062
symbol: rnfE
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfE; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: SAMN02745176_02063
symbol: rnfA
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: SAMN02745176_02064
symbol: rnfB
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.


ensembl_gene_id: SAMN02745176_02066
symbol: SHJ00564.1
gene_biotype: protein_coding
description:
  Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: SAMN02745176_02072
symbol: minC
gene_biotype: protein_coding
description:
  Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: SAMN02745176_02074
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: SAMN02745176_02082
symbol: rplU
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: SAMN02745176_02085
symbol: obg
gene_biotype: protein_coding
description:
  GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: SAMN02745176_02101
symbol: SHJ01305.1
gene_biotype: protein_coding
description:
  Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: SAMN02745176_02178
symbol: SHJ03968.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: SAMN02745176_02179
symbol: sepF
gene_biotype: protein_coding
description:
  Cell division inhibitor SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: SAMN02745176_02185
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: SAMN02745176_02187
symbol: pyrR
gene_biotype: protein_coding
description:
  Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.


ensembl_gene_id: SAMN02745176_02188
symbol: SHJ04178.1
gene_biotype: protein_coding
description:
  neurotransmitter:Na+ symporter, NSS family; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.


ensembl_gene_id: SAMN02745176_02189
symbol: SHJ04198.1
gene_biotype: protein_coding
description:
  Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains.


ensembl_gene_id: SAMN02745176_02190
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: SAMN02745176_02194
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: SAMN02745176_02195
symbol: SHJ04308.1
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: SAMN02745176_02196
symbol: priA
gene_biotype: protein_coding
description:
  Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: SAMN02745176_02197
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: SAMN02745176_02198
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: SAMN02745176_02200
symbol: SHJ04415.1
gene_biotype: protein_coding
description:
  NusB antitermination factor; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: SAMN02745176_02201
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: SAMN02745176_02204
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: SAMN02745176_02212
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN02745176_02214
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: SAMN02745176_02218
symbol: tmcAL
gene_biotype: protein_coding
description:
  Predicted nucleotidyltransferase; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.


ensembl_gene_id: SAMN02745176_02219
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: SAMN02745176_02223
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate:acyl-[acyl carrier protein] acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: SAMN02745176_02224
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase-3; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: SAMN02745176_02227
symbol: SHJ04935.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN02745176_02229
symbol: SHJ04971.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: SAMN02745176_02230
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease-3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: SAMN02745176_02233
symbol: smc
gene_biotype: protein_coding
description:
  Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: SAMN02745176_02234
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: SAMN02745176_02235
symbol: SHJ05089.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.


ensembl_gene_id: SAMN02745176_02236
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: SAMN02745176_02239
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: SAMN02745176_02240
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine37-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: SAMN02745176_02241
symbol: rplS
gene_biotype: protein_coding
description:
  LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: SAMN02745176_02242
symbol: SHJ05226.1
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: SAMN02745176_02250
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase-1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: SAMN02745176_02251
symbol: hslV
gene_biotype: protein_coding
description:
  ATP-dependent HslUV protease, peptidase subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: SAMN02745176_02252
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent HslUV protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: SAMN02745176_02253
symbol: codY
gene_biotype: protein_coding
description:
  Transcriptional pleiotropic repressor; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family.


ensembl_gene_id: SAMN02745176_02254
symbol: SHJ05487.1
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: SAMN02745176_02255
symbol: SHJ05509.1
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgC; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: SAMN02745176_02257
symbol: SHJ05551.1
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: SAMN02745176_02264
symbol: SHJ05704.1
gene_biotype: protein_coding
description:
  Flagellar hook capping protein-N-terminal region; Required for flagellar hook formation. May act as a scaffolding protein.


ensembl_gene_id: SAMN02745176_02270
symbol: SHJ05825.1
gene_biotype: protein_coding
description:
  Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: SAMN02745176_02275
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: SAMN02745176_02276
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: SAMN02745176_02277
symbol: SHJ05981.1
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: SAMN02745176_02278
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: SAMN02745176_02279
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: SAMN02745176_02286
symbol: cheD
gene_biotype: protein_coding
description:
  Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: SAMN02745176_02288
symbol: SHJ06241.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02745176_02315
symbol: SHJ07795.1
gene_biotype: protein_coding
description:
  LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.


ensembl_gene_id: SAMN02745176_02343
symbol: glmU
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: SAMN02745176_02344
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: SAMN02745176_02345
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: SAMN02745176_02346
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN02745176_02351
symbol: SHJ08433.1
gene_biotype: protein_coding
description:
  DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: SAMN02745176_02366
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: SAMN02745176_02367
symbol: SHJ08679.1
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: SAMN02745176_02368
symbol: ftsH-2
gene_biotype: protein_coding
description:
  Membrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: SAMN02745176_02375
symbol: SHJ08912.1
gene_biotype: protein_coding
description:
  Sodium pump decarboxylases, gamma subunit; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the OadG family.


ensembl_gene_id: SAMN02745176_02377
symbol: SHJ08955.1
gene_biotype: protein_coding
description:
  glutaconyl-CoA decarboxylase beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).


ensembl_gene_id: SAMN02745176_02378
symbol: birA
gene_biotype: protein_coding
description:
  Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: SAMN02745176_02380
symbol: coaX
gene_biotype: protein_coding
description:
  Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: SAMN02745176_02381
symbol: SHJ09053.1
gene_biotype: protein_coding
description:
  tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: SAMN02745176_02384
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: SAMN02745176_02393
symbol: SHJ10255.1
gene_biotype: protein_coding
description:
  GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex.


ensembl_gene_id: SAMN02745176_02412
symbol: SHJ10744.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN02745176_02414
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: SAMN02745176_02415
symbol: SHJ10797.1
gene_biotype: protein_coding
description:
  Dihydrofolate synthase / folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: SAMN02745176_02421
symbol: SHJ10953.1
gene_biotype: protein_coding
description:
  Polysaccharide deacetylase family sporulation protein PdaB/delta-lactam-biosynthetic de-N-acetylase,TIGR02884.


ensembl_gene_id: SAMN02745176_02427
symbol: dapH
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate.


ensembl_gene_id: SAMN02745176_02428
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: SAMN02745176_02429
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: SAMN02745176_02430
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: SAMN02745176_02433
symbol: hslO
gene_biotype: protein_coding
description:
  Molecular chaperone Hsp33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: SAMN02745176_02443
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: SAMN02745176_02450
symbol: SHJ11529.1
gene_biotype: protein_coding
description:
  Monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-); Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745176_02451
symbol: SHJ11560.1
gene_biotype: protein_coding
description:
  Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745176_02452
symbol: infC
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: SAMN02745176_02454
symbol: rplT
gene_biotype: protein_coding
description:
  LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: SAMN02745176_02455
symbol: SHJ11657.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN02745176_02457
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: SAMN02745176_02458
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: SAMN02745176_02466
symbol: SHJ11880.1
gene_biotype: protein_coding
description:
  Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: SAMN02745176_02470
symbol: mutS2
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: SAMN02745176_02477
symbol: SHJ12114.1
gene_biotype: protein_coding
description:
  Indolepyruvate ferredoxin oxidoreductase alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.


ensembl_gene_id: SAMN02745176_02482
symbol: tmk
gene_biotype: protein_coding
description:
  dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: SAMN02745176_02486
symbol: spoIIAB
gene_biotype: protein_coding
description:
  Stage II sporulation protein AB (anti-sigma F factor); Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.


ensembl_gene_id: SAMN02745176_02487
symbol: SHJ12305.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma subunit, RpoX/SigF; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02745176_02496
symbol: SHJ13245.1
gene_biotype: protein_coding
description:
  c-di-AMP phosphodiesterase, consists of a GGDEF-like and DHH domains; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.


ensembl_gene_id: SAMN02745176_02499
symbol: SHJ13311.1
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: SAMN02745176_02545
symbol: rlmH
gene_biotype: protein_coding
description:
  23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: SAMN02745176_02570
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: SAMN02745176_02571
symbol: gcvPA
gene_biotype: protein_coding
description:
  Glycine dehydrogenase (decarboxylating) alpha subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: SAMN02745176_02572
symbol: gcvPB
gene_biotype: protein_coding
description:
  Glycine dehydrogenase (decarboxylating) beta subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily.


ensembl_gene_id: SAMN02745176_02614
symbol: SHJ16269.1
gene_biotype: protein_coding
description:
  Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: SAMN02745176_02639
symbol: rplY
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: SAMN02745176_02646
symbol: topB
gene_biotype: protein_coding
description:
  DNA topoisomerase-3; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: SAMN02745176_02664
symbol: pdxS
gene_biotype: protein_coding
description:
  Pyridoxal 5'-phosphate synthase pdxS subunit; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.


ensembl_gene_id: SAMN02745176_02667
symbol: pcp
gene_biotype: protein_coding
description:
  Pyroglutamyl-peptidase; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family.


ensembl_gene_id: SAMN02745176_02684
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: SAMN02745176_02685
symbol: rnr
gene_biotype: protein_coding
description:
  RNAse R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: SAMN02745176_02687
symbol: hppA
gene_biotype: protein_coding
description:
  K(+)-stimulated pyrophosphate-energized sodium pump; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily.


ensembl_gene_id: SAMN02745176_02688
symbol: SHJ18465.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: SAMN02745176_02689
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: SAMN02745176_02690
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: SAMN02745176_02732
symbol: SHJ19158.1
gene_biotype: protein_coding
description:
  tRNA (cytidine/uridine-2'-O-)-methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: SAMN02745176_02734
symbol: SHJ19780.1
gene_biotype: protein_coding
description:
  Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN02745176_02740
symbol: rnz
gene_biotype: protein_coding
description:
  RNAse Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.


ensembl_gene_id: SAMN02745176_02776
symbol: sstT
gene_biotype: protein_coding
description:
  Serine/threonine transporter; Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system). Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: SAMN02745176_02803
symbol: SHJ21904.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid:cation transporter, LIVCS family; Component of the transport system for branched-chain amino acids.


ensembl_gene_id: SAMN02745176_02862
symbol: glyA
gene_biotype: protein_coding
description:
  Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: SAMN02745176_02867
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: SAMN02745176_02872
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: SAMN02745176_02873
symbol: SHJ23895.1
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: SAMN02745176_02874
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: SAMN02745176_02877
symbol: secF
gene_biotype: protein_coding
description:
  Protein translocase subunit secF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: SAMN02745176_02878
symbol: secD
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: SAMN02745176_02882
symbol: tgt
gene_biotype: protein_coding
description:
  tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...]


ensembl_gene_id: SAMN02745176_02884
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine--tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: SAMN02745176_02886
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: SAMN02745176_02887
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: SAMN02745176_02888
symbol: ruvC
gene_biotype: protein_coding
description:
  Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: SAMN02745176_02893
symbol: nadE
gene_biotype: protein_coding
description:
  NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.


ensembl_gene_id: SAMN02745176_02896
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.


ensembl_gene_id: SAMN02745176_02979
symbol: rpsR
gene_biotype: protein_coding
description:
  SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: SAMN02745176_02980
symbol: SHJ27059.1
gene_biotype: protein_coding
description:
  Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: SAMN02745176_02998
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: SAMN02745176_02999
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: SAMN02745176_03000
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase trmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: SAMN02745176_03003
symbol: SHJ27459.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: SAMN02745176_03004
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: SAMN02745176_03005
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: SAMN02745176_03006
symbol: SHJ27520.1
gene_biotype: protein_coding
description:
  DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]


ensembl_gene_id: SAMN02745176_03008
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: SAMN02745176_03010
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN02745176_03015
symbol: SHJ27681.1
gene_biotype: protein_coding
description:
  Putative ABC transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745176_03019
symbol: metN
gene_biotype: protein_coding
description:
  D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: SAMN02745176_03022
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN02745176_03045
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: SAMN02745176_03047
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: SAMN02745176_03068
symbol: dacA
gene_biotype: protein_coding
description:
  Diadenylate cyclase; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: SAMN02745176_03071
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: SAMN02745176_03073
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: SAMN02745176_03075
symbol: SHJ29288.1
gene_biotype: protein_coding
description:
  Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: SAMN02745176_03077
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: SAMN02745176_03079
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: SAMN02745176_03081
symbol: polC
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit alpha; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN02745176_03082
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: SAMN02745176_03086
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: SAMN02745176_03087
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: SAMN02745176_03089
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine55 synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: SAMN02745176_03091
symbol: rpsO
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: SAMN02745176_03092
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: SAMN02745176_03095
symbol: dut
gene_biotype: protein_coding
description:
  dUTP pyrophosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: SAMN02745176_03102
symbol: rimO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: SAMN02745176_03105
symbol: recA
gene_biotype: protein_coding
description:
  Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: SAMN02745176_03106
symbol: recX
gene_biotype: protein_coding
description:
  SOS response regulatory protein OraA/RecX, interacts with RecA; Modulates RecA activity; Belongs to the RecX family.


ensembl_gene_id: SAMN02745176_03132
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: SAMN02745176_03139
symbol: SHJ30939.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, cofD-related; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.


ensembl_gene_id: SAMN02745176_03145
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: SAMN02745176_03149
symbol: SHJ31112.1
gene_biotype: protein_coding
description:
  23S rRNA (uracil1939-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: SAMN02745176_03154
symbol: SHJ31463.1
gene_biotype: protein_coding
description:
  23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN02745176_03155
symbol: thyX
gene_biotype: protein_coding
description:
  Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: SAMN02745176_03161
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: SAMN02745176_03166
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA/Sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: SAMN02745176_03181
symbol: SHJ31943.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: SAMN02745176_03194
symbol: SHJ32335.1
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 1 subfamily.


ensembl_gene_id: SAMN02745176_03199
symbol: nfo
gene_biotype: protein_coding
description:
  Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.


ensembl_gene_id: SAMN02745176_03205
symbol: citD
gene_biotype: protein_coding
description:
  Citrate lyase subunit gamma (acyl carrier protein); Covalent carrier of the coenzyme of citrate lyase.


ensembl_gene_id: SAMN02745176_03206
symbol: SHJ32507.1
gene_biotype: protein_coding
description:
  [citrate (pro-3S)-lyase] ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.


ensembl_gene_id: SAMN02745176_03218
symbol: SHJ32944.1
gene_biotype: protein_coding
description:
  Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family.


ensembl_gene_id: SAMN02745176_03243
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole-phosphate synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: SAMN02745176_03246
symbol: thiE-2
gene_biotype: protein_coding
description:
  Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: SAMN02745176_03265
symbol: recR
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: SAMN02745176_03266
symbol: SHJ33925.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: SAMN02745176_03267
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN02745176_03326
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: SAMN02745176_03327
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: SAMN02745176_03394
symbol: fusA
gene_biotype: protein_coding
description:
  Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: SAMN02745176_03395
symbol: rpsG
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: SAMN02745176_03396
symbol: rpsL
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: SAMN02745176_03398
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN02745176_03400
symbol: rplL
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: SAMN02745176_03401
symbol: rplJ
gene_biotype: protein_coding
description:
  LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: SAMN02745176_03403
symbol: rplA
gene_biotype: protein_coding
description:
  LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: SAMN02745176_03404
symbol: rplK
gene_biotype: protein_coding
description:
  LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: SAMN02745176_03405
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: SAMN02745176_03406
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: SAMN02745176_03498
symbol: SHJ41423.1
gene_biotype: protein_coding
description:
  23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


# pathwayInfo

id: CL:1005
description: Mixed, incl. Translation, and Protein export
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1005_Mixed,_incl._Translation,_and_Protein_export


id: CL:1006
description: Translation, and Protein export
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1006_Translation,_and_Protein_export


id: CL:1007
description: Translation, and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1007_Translation,_and_Ribosome_biogenesis


id: CL:1008
description: Mixed, incl. Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1008_Mixed,_incl._Ribosome,_and_Regulation_of_translation


id: CL:1011
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1011_Ribosome,_and_Regulation_of_translation


id: CL:1013
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1013_Ribosome,_and_Regulation_of_translation


id: CL:1017
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1017_Ribosome,_and_Regulation_of_translation


id: CL:1019
description: Ribosome, and Translational elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1019_Ribosome,_and_Translational_elongation


id: CL:1021
description: Ribosome, and Translational elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1021_Ribosome,_and_Translational_elongation


id: CL:1023
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1023_Ribosome,_and_Translation_regulator_activity


id: CL:1024
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1024_Structural_constituent_of_ribosome


id: CL:1026
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1026_Structural_constituent_of_ribosome


id: CL:1029
description: Large ribosomal subunit, and rRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1029_Large_ribosomal_subunit,_and_rRNA-binding


id: CL:1030
description: Large ribosomal subunit, and tRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1030_Large_ribosomal_subunit,_and_tRNA-binding


id: CL:1045
description: Mixed, incl. Ribosomal protein L2, domain 2, and Large ribosomal subunit rRNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1045_Mixed,_incl._Ribosomal_protein_L2,_domain_2,_and_Large_ribosomal_subunit_rRNA_binding


id: CL:1066
description: Mixed, incl. Small ribosomal subunit, and K Homology domain, type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1066_Mixed,_incl._Small_ribosomal_subunit,_and_K_Homology_domain,_type_2


id: CL:1097
description: Ribosome, and Translation elongation factor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1097_Ribosome,_and_Translation_elongation_factor_activity


id: CL:1098
description: Ribosome, and Translation elongation factor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1098_Ribosome,_and_Translation_elongation_factor_activity


id: CL:1106
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1106_Mixed,_incl._Small_ribosomal_subunit,_and_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor

description:
  Mixed, incl. Small ribosomal subunit, and Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor


id: CL:1126
description: L28p-like, and Zinc-binding ribosomal protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1126_L28p-like,_and_Zinc-binding_ribosomal_protein


id: CL:114
description: Mixed, incl. Carbon metabolism, and Generation of precursor metabolites and energy
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:114_Mixed,_incl._Carbon_metabolism,_and_Generation_of_precursor_metabolites_and_energy


id: CL:1147
description: Mixed, incl. Ribosomal protein L7/L12, and Zinc-binding ribosomal protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1147_Mixed,_incl._Ribosomal_protein_L7/L12,_and_Zinc-binding_ribosomal_protein


id: CL:115
description: Mixed, incl. Butanoate metabolism, and Electron transport chain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:115_Mixed,_incl._Butanoate_metabolism,_and_Electron_transport_chain


id: CL:117
description: Mixed, incl. Butanoate metabolism, and 4Fe-4S ferredoxin-type, iron-sulphur binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:117_Mixed,_incl._Butanoate_metabolism,_and_4Fe-4S_ferredoxin-type,_iron-sulphur_binding_domain


id: CL:1175
description: Translation release factor activity, and Ribonuclease III domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1175_Translation_release_factor_activity,_and_Ribonuclease_III_domain


id: CL:118
description: Mixed, incl. Butanoate metabolism, and 4Fe-4S ferredoxin-type, iron-sulphur binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:118_Mixed,_incl._Butanoate_metabolism,_and_4Fe-4S_ferredoxin-type,_iron-sulphur_binding_domain


id: CL:119
description: Butanoate metabolism, and 4Fe-4S ferredoxin-type, iron-sulphur binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:119_Butanoate_metabolism,_and_4Fe-4S_ferredoxin-type,_iron-sulphur_binding_domain


id: CL:1197
description: Mixed, incl. Peptidyl-proline modification, and ATP-dependent activity, acting on RNA
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1197_Mixed,_incl._Peptidyl-proline_modification,_and_ATP-dependent_activity,_acting_on_RNA


id: CL:121
description: Butanoate metabolism, and 4Fe-4S ferredoxin-type, iron-sulphur binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:121_Butanoate_metabolism,_and_4Fe-4S_ferredoxin-type,_iron-sulphur_binding_domain


id: CL:1218
description: Mixed, incl. K homology RNA-binding domain, and Ribosomal small subunit biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1218_Mixed,_incl._K_homology_RNA-binding_domain,_and_Ribosomal_small_subunit_biogenesis


id: CL:122
description: Mixed, incl. Citrate cycle (TCA cycle), and NADH dehydrogenase (quinone) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:122_Mixed,_incl._Citrate_cycle_(TCA_cycle),_and_NADH_dehydrogenase_(quinone)_activity


id: CL:1220
description: Mixed, incl. Ribosomal small subunit biogenesis, and tRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1220_Mixed,_incl._Ribosomal_small_subunit_biogenesis,_and_tRNA_pseudouridine_synthesis


id: CL:123
description: Mixed, incl. Citrate cycle (TCA cycle), and NADH dehydrogenase (quinone) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:123_Mixed,_incl._Citrate_cycle_(TCA_cycle),_and_NADH_dehydrogenase_(quinone)_activity


id: CL:1240
description: K Homology domain, type 1, and Methylthiotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1240_K_Homology_domain,_type_1,_and_Methylthiotransferase


id: CL:1249
description: tRNA aminoacylation, and glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1249_tRNA_aminoacylation,_and_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: CL:125
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain, and Citrate cycle (TCA cycle)
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:125_4Fe-4S_ferredoxin-type,_iron-sulphur_binding_domain,_and_Citrate_cycle_(TCA_cycle)


id: CL:1251
description: tRNA aminoacylation for protein translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1251_tRNA_aminoacylation_for_protein_translation


id: CL:1252
description: tRNA aminoacylation for protein translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1252_tRNA_aminoacylation_for_protein_translation


id: CL:1256
description: tRNA aminoacylation for protein translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1256_tRNA_aminoacylation_for_protein_translation


id: CL:1259
description: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1259_Aminoacyl-tRNA_synthetase,_class_Ia,_anticodon-binding


id: CL:1283
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1283_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_Aspartyl/Asparaginyl-tRNA_synthetase,_class_IIb

description:
  glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and Aspartyl/Asparaginyl-tRNA synthetase, class IIb


id: CL:129
description: NADH dehydrogenase (quinone) activity, and Thiamine pyrophosphate binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:129_NADH_dehydrogenase_(quinone)_activity,_and_Thiamine_pyrophosphate_binding


id: CL:1304
description: Protein export, and Bacterial nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1304_Protein_export,_and_Bacterial_nucleoid


id: CL:1307
description: Translocation, and SRP54-type protein, helical bundle domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1307_Translocation,_and_SRP54-type_protein,_helical_bundle_domain


id: CL:132
description: NADH dehydrogenase (ubiquinone) activity, and Thiamine pyrophosphate binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:132_NADH_dehydrogenase_(ubiquinone)_activity,_and_Thiamine_pyrophosphate_binding


id: CL:1329
description: Mixed, incl. RNA polymerase, and MerR transcriptional regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1329_Mixed,_incl._RNA_polymerase,_and_MerR_transcriptional_regulator


id: CL:133
description: Thiamine pyrophosphate binding, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:133_Thiamine_pyrophosphate_binding,_and_4Fe-4S_dicluster_domain


id: CL:1355
description: Protein folding, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1355_Protein_folding,_and_ATP-dependent_peptidase_activity


id: CL:1358
description: Protein folding, and Clp protease
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1358_Protein_folding,_and_Clp_protease


id: CL:136
description: 4Fe-4S dicluster domain, and Thiamine pyrophosphate binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:136_4Fe-4S_dicluster_domain,_and_Thiamine_pyrophosphate_binding


id: CL:1386
description: Unfolded protein binding, and ANK repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1386_Unfolded_protein_binding,_and_ANK_repeat


id: CL:1398
description: Mixed, incl. ANK repeat, and Heparin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1398_Mixed,_incl._ANK_repeat,_and_Heparin_binding


id: CL:1415
description: UVR domain, and Allosteric enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1415_UVR_domain,_and_Allosteric_enzyme


id: CL:1428
description: Mixed, incl. Positive regulation of gene expression, and Anaerobic coproporphyrinogen-III oxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1428_Mixed,_incl._Positive_regulation_of_gene_expression,_and_Anaerobic_coproporphyrinogen-III_oxidase


id: CL:1440
description: Mostly uncharacterized, incl. rRNA methyltransferase activity, and PASTA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1440_Mostly_uncharacterized,_incl._rRNA_methyltransferase_activity,_and_PASTA_domain


id: CL:1442
description: Mixed, incl. rRNA methyltransferase activity, and PASTA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1442_Mixed,_incl._rRNA_methyltransferase_activity,_and_PASTA_domain


id: CL:1444
description: rRNA methyltransferase activity, and Formyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1444_rRNA_methyltransferase_activity,_and_Formyl_transferase


id: CL:1454
description: Mixed, incl. PASTA domain, and Pentose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1454_Mixed,_incl._PASTA_domain,_and_Pentose_metabolic_process


id: CL:147
description: Mixed, incl. Domain of unknown function, and Quinone binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:147_Mixed,_incl._Domain_of_unknown_function,_and_Quinone_binding


id: CL:1472
description: Mixed, incl. DNA replication, and DNA damage sensor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1472_Mixed,_incl._DNA_replication,_and_DNA_damage_sensor_activity


id: CL:1474
description: DNA replication, and Deoxyribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1474_DNA_replication,_and_Deoxyribonuclease_activity


id: CL:1476
description: DNA-directed DNA polymerase activity, and Nucleotide excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1476_DNA-directed_DNA_polymerase_activity,_and_Nucleotide_excision_repair


id: CL:1478
description: DNA-directed DNA polymerase activity, and Nucleotide excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1478_DNA-directed_DNA_polymerase_activity,_and_Nucleotide_excision_repair


id: CL:1479
description: Nucleotide excision repair, and UmuC domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1479_Nucleotide_excision_repair,_and_UmuC_domain


id: CL:1481
description: DNA excision, and UvrD/REP helicase N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1481_DNA_excision,_and_UvrD/REP_helicase_N-terminal_domain


id: CL:1495
description: DNA-directed DNA polymerase, and LexA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1495_DNA-directed_DNA_polymerase,_and_LexA-like


id: CL:1509
description: DNA polymerase complex, and Helix-hairpin-helix motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1509_DNA_polymerase_complex,_and_Helix-hairpin-helix_motif


id: CL:1541
description: DNA topoisomerase, type IIA-like domain superfamily, and DNA replication initiation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1541_DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_DNA_replication_initiation


id: CL:1559
description: Mismatched DNA binding, and LSM domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1559_Mismatched_DNA_binding,_and_LSM_domain_superfamily


id: CL:158
description: NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain, and NuoE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:158_NADH-ubiquinone_oxidoreductase_51kDa_subunit,_iron-sulphur_binding_domain,_and_NuoE_domain


id: CL:1582
description: Mixed, incl. ParB/Spo0J, HTH domain, and Protein carrier chaperone
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1582_Mixed,_incl._ParB/Spo0J,_HTH_domain,_and_Protein_carrier_chaperone


id: CL:1584
description: Mixed, incl. Protein carrier chaperone, and FAD binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1584_Mixed,_incl._Protein_carrier_chaperone,_and_FAD_binding_domain


id: CL:1613
description: Mixed, incl. RNA-DNA hybrid ribonuclease activity, and FlhB HrpN YscU SpaS Family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1613_Mixed,_incl._RNA-DNA_hybrid_ribonuclease_activity,_and_FlhB_HrpN_YscU_SpaS_Family


id: CL:1625
description: Mixed, incl. RelA/SpoT, and Endospore-forming forespore
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1625_Mixed,_incl._RelA/SpoT,_and_Endospore-forming_forespore


id: CL:1627
description: Mixed, incl. Endospore-forming forespore, and CarD-like/TRCF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1627_Mixed,_incl._Endospore-forming_forespore,_and_CarD-like/TRCF_domain


id: CL:1629
description: Mixed, incl. Endospore-forming forespore, and dUTP catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1629_Mixed,_incl._Endospore-forming_forespore,_and_dUTP_catabolic_process


id: CL:1653
description: RelA/SpoT, and Bile acid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1653_RelA/SpoT,_and_Bile_acid_catabolic_process


id: CL:1665
description: Mixed, incl. glycyl-tRNA aminoacylation, and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1665_Mixed,_incl._glycyl-tRNA_aminoacylation,_and_Ribosome_biogenesis


id: CL:1666
description: Mixed, incl. glycyl-tRNA aminoacylation, and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1666_Mixed,_incl._glycyl-tRNA_aminoacylation,_and_Ribosome_biogenesis


id: CL:1668
description: Mixed, incl. K Homology domain, type 2, and Vitamin B6 metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1668_Mixed,_incl._K_Homology_domain,_type_2,_and_Vitamin_B6_metabolism


id: CL:1678
description: glycyl-tRNA aminoacylation, and PEP-utilising enzyme, mobile domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1678_glycyl-tRNA_aminoacylation,_and_PEP-utilising_enzyme,_mobile_domain


id: CL:1687
description: Mixed, incl. Membrane raft, and Nucleic acid-binding, OB-fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1687_Mixed,_incl._Membrane_raft,_and_Nucleic_acid-binding,_OB-fold


id: CL:1699
description: Mixed, incl. Terpenoid metabolic process, and DNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1699_Mixed,_incl._Terpenoid_metabolic_process,_and_DNA_catabolic_process


id: CL:1700
description: Mixed, incl. Terpenoid metabolic process, and DNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1700_Mixed,_incl._Terpenoid_metabolic_process,_and_DNA_catabolic_process


id: CL:1702
description: Mixed, incl. DNA catabolic process, and NusB family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1702_Mixed,_incl._DNA_catabolic_process,_and_NusB_family


id: CL:1705
description: DNA catabolic process, and NusB family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1705_DNA_catabolic_process,_and_NusB_family


id: CL:1738
description: Mixed, incl. CarD-like/TRCF domain, and PIN-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1738_Mixed,_incl._CarD-like/TRCF_domain,_and_PIN-like_domain_superfamily


id: CL:1752
description: Mixed, incl. Exoribonuclease activity, and Cold shock, CspA
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1752_Mixed,_incl._Exoribonuclease_activity,_and_Cold_shock,_CspA


id: CL:1763
description: Mixed, incl. Peptidase, FtsH, and Multidrug and toxic compound extrusion MepA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1763_Mixed,_incl._Peptidase,_FtsH,_and_Multidrug_and_toxic_compound_extrusion_MepA-like


id: CL:1772
description: Mixed, incl. rRNA processing, and PPIC-type PPIASE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1772_Mixed,_incl._rRNA_processing,_and_PPIC-type_PPIASE_domain


id: CL:1773
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1773_Mixed,_incl._rRNA_processing,_and_Nitrogen_regulatory_protein_PII/ATP_phosphoribosyltransferase,_C-terminal

description:
  Mixed, incl. rRNA processing, and Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal


id: CL:1777
description: Mixed, incl. Peptidoglycan turnover, and rRNA (adenine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1777_Mixed,_incl._Peptidoglycan_turnover,_and_rRNA_(adenine)_methyltransferase_activity


id: CL:1791
description: Mixed, incl. O-methyltransferase activity, and Methyltransferase small domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1791_Mixed,_incl._O-methyltransferase_activity,_and_Methyltransferase_small_domain


id: CL:1802
description: PPIC-type PPIASE domain, and Membrane assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1802_PPIC-type_PPIASE_domain,_and_Membrane_assembly


id: CL:181
description: Oxalate metabolic process, and Pyruvate:ferredoxin oxidoreductase core domain II
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:181_Oxalate_metabolic_process,_and_Pyruvate:ferredoxin_oxidoreductase_core_domain_II


id: CL:1811
description: Lysine degradation, and Ornithine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1811_Lysine_degradation,_and_Ornithine_metabolic_process


id: CL:1812
description: Ornithine metabolic process, and Cobalamin (vitamin B12)-dependent enzyme, catalytic
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1812_Ornithine_metabolic_process,_and_Cobalamin_(vitamin_B12)-dependent_enzyme,_catalytic


id: CL:1815
description: D-Arginine and D-ornithine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1815_D-Arginine_and_D-ornithine_metabolism


id: CL:1834
description: Lysine catabolic process, and D-lysine 5,6-aminomutase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1834_Lysine_catabolic_process,_and_D-lysine_5,6-aminomutase_activity


id: CL:1846
description: Mixed, incl. Polysaccharide biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1846_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:1847
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1847_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthetic_process


id: CL:1848
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1848_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthetic_process


id: CL:1850
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1850_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthetic_process


id: CL:1852
description: O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1852_O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthetic_process


id: CL:1853
description: Polysaccharide biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1853_Polysaccharide_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:1855
description: Polysaccharide biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1855_Polysaccharide_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:1857
description: Polysaccharide biosynthetic process, and Bacterial transferase hexapeptide (six repeats)
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1857_Polysaccharide_biosynthetic_process,_and_Bacterial_transferase_hexapeptide_(six_repeats)


id: CL:1860
description: Mixed, incl. Glycosyl transferases group 1, and UDP-N-acetylglucosamine 2-epimerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1860_Mixed,_incl._Glycosyl_transferases_group_1,_and_UDP-N-acetylglucosamine_2-epimerase


id: CL:1878
description: Mixed, incl. Glycosyl transferase 4-like, and Bacterial sugar transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1878_Mixed,_incl._Glycosyl_transferase_4-like,_and_Bacterial_sugar_transferase


id: CL:1893
description: O-Antigen nucleotide sugar biosynthesis, and Glycosyltransferase like family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1893_O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyltransferase_like_family


id: CL:1897
description: Polyketide sugar unit biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1897_Polyketide_sugar_unit_biosynthesis


id: CL:1913
description: Galactose metabolic process, and Polysaccharide biosynthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1913_Galactose_metabolic_process,_and_Polysaccharide_biosynthesis_protein


id: CL:1929
description: Mixed, incl. Cytidylyltransferase IspD/TarI, and Polysaccharide biosynthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1929_Mixed,_incl._Cytidylyltransferase_IspD/TarI,_and_Polysaccharide_biosynthesis_protein


id: CL:1938
description: Mixed, incl. Amino sugar metabolic process, and Alpha-D-phosphohexomutase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1938_Mixed,_incl._Amino_sugar_metabolic_process,_and_Alpha-D-phosphohexomutase,_C-terminal


id: CL:1940
description: Mixed, incl. Alpha-D-phosphohexomutase, C-terminal, and Uridylyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1940_Mixed,_incl._Alpha-D-phosphohexomutase,_C-terminal,_and_Uridylyltransferase_activity


id: CL:1967
description: Mixed, incl. Glycosyl transferase 4-like, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1967_Mixed,_incl._Glycosyl_transferase_4-like,_and_Acetyltransferase_(GNAT)_domain


id: CL:1971
description: Mixed, incl. Glycosyl transferase 4-like, and O-Antigen ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1971_Mixed,_incl._Glycosyl_transferase_4-like,_and_O-Antigen_ligase


id: CL:1996
description: Mixed, incl. Protein glycosylation, and Small drug/metabolite transporter protein family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:1996_Mixed,_incl._Protein_glycosylation,_and_Small_drug/metabolite_transporter_protein_family


id: CL:201
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:201_Mixed,_incl._2-oxoacid:acceptor_oxidoreductase,_gamma_subunit,_pyruvate/2-ketoisovalerate,_and_4Fe-4S_binding_domain

description:
  Mixed, incl. 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate, and 4Fe-4S binding domain


id: CL:2010
description: Mixed, incl. Spore coat protein CotS, and Glycosyltransferase Family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2010_Mixed,_incl._Spore_coat_protein_CotS,_and_Glycosyltransferase_Family_4


id: CL:2011
description: Spore coat protein CotS, and Glycosyltransferase Family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2011_Spore_coat_protein_CotS,_and_Glycosyltransferase_Family_4


id: CL:2013
description: Spore coat protein CotS, and Glycosyltransferase Family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2013_Spore_coat_protein_CotS,_and_Glycosyltransferase_Family_4


id: CL:2030
description: Mixed, incl. Coat F domain, and Peptidase M29
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2030_Mixed,_incl._Coat_F_domain,_and_Peptidase_M29


id: CL:2039
description: Mixed, incl. Cell division, and Phosphate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2039_Mixed,_incl._Cell_division,_and_Phosphate_ion_transport


id: CL:2040
description: Mixed, incl. Cell division, and Regulation of cell shape
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2040_Mixed,_incl._Cell_division,_and_Regulation_of_cell_shape


id: CL:2041
description: Mixed, incl. Cell division, and Regulation of cell shape
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2041_Mixed,_incl._Cell_division,_and_Regulation_of_cell_shape


id: CL:2042
description: Mixed, incl. Peptidoglycan metabolic process, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2042_Mixed,_incl._Peptidoglycan_metabolic_process,_and_Cell_division


id: CL:2043
description: Mixed, incl. Cell division, and Cationic antimicrobial peptide (CAMP) resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2043_Mixed,_incl._Cell_division,_and_Cationic_antimicrobial_peptide_(CAMP)_resistance


id: CL:2044
description: Cell division, and ATP-grasp fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2044_Cell_division,_and_ATP-grasp_fold


id: CL:2046
description: Regulation of cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2046_Regulation_of_cell_shape,_and_Cell_division_site


id: CL:2047
description: Cell shape, and Penicillin-binding protein, transpeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2047_Cell_shape,_and_Penicillin-binding_protein,_transpeptidase


id: CL:2049
description: Cell shape, and Penicillin-binding protein, transpeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2049_Cell_shape,_and_Penicillin-binding_protein,_transpeptidase


id: CL:2053
description: Mur ligase, central, and Glycosyl transferase family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2053_Mur_ligase,_central,_and_Glycosyl_transferase_family_4


id: CL:2073
description: Penicillin-binding protein, transpeptidase, and Cell cycle protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2073_Penicillin-binding_protein,_transpeptidase,_and_Cell_cycle_protein


id: CL:2089
description: Cell division site, and rRNA (cytosine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2089_Cell_division_site,_and_rRNA_(cytosine)_methyltransferase_activity


id: CL:2098
description: Acid-amino acid ligase activity, and Peptidase S51
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2098_Acid-amino_acid_ligase_activity,_and_Peptidase_S51


id: CL:2114
description: Mixed, incl. RNA-binding S4 domain, and CCB3/YggT
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2114_Mixed,_incl._RNA-binding_S4_domain,_and_CCB3/YggT


id: CL:2116
description: Mixed, incl. CCB3/YggT, and Thylakoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2116_Mixed,_incl._CCB3/YggT,_and_Thylakoid


id: CL:213
description: Butyrate metabolic process, and Coenzyme A transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:213_Butyrate_metabolic_process,_and_Coenzyme_A_transferase


id: CL:2134
description: Mixed, incl. N-acetylmuramoyl-L-alanine amidase, catalytic domain, and Carboxypeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2134_Mixed,_incl._N-acetylmuramoyl-L-alanine_amidase,_catalytic_domain,_and_Carboxypeptidase_activity


id: CL:2135
description: N-acetylmuramoyl-L-alanine amidase, catalytic domain, and Carboxypeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2135_N-acetylmuramoyl-L-alanine_amidase,_catalytic_domain,_and_Carboxypeptidase_activity


id: CL:2138
description: N-acetylmuramoyl-L-alanine amidase, catalytic domain, and Cell surface
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2138_N-acetylmuramoyl-L-alanine_amidase,_catalytic_domain,_and_Cell_surface


id: CL:215
description: Butyrate metabolic process, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:215_Butyrate_metabolic_process,_and_Electron_transfer_flavoprotein_domain


id: CL:2153
description: Carboxypeptidase activity, and Peptidoglycan binding-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2153_Carboxypeptidase_activity,_and_Peptidoglycan_binding-like


id: CL:2178
description: Mixed, incl. Antibiotic resistance, and Asp/Glu racemase, active site 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2178_Mixed,_incl._Antibiotic_resistance,_and_Asp/Glu_racemase,_active_site_1


id: CL:2187
description: Mixed, incl. Translocase, and Regulation of cell cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2187_Mixed,_incl._Translocase,_and_Regulation_of_cell_cycle


id: CL:2188
description: Mixed, incl. Electron transport, and RnfC Barrel sandwich hybrid domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2188_Mixed,_incl._Electron_transport,_and_RnfC_Barrel_sandwich_hybrid_domain


id: CL:2189
description: Mixed, incl. Actin, and Inosine triphosphate pyrophosphatase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2189_Mixed,_incl._Actin,_and_Inosine_triphosphate_pyrophosphatase-like


id: CL:2216
description: Mixed, incl. Regulation of cell cycle, and ATP binding protein MinD/FleN
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2216_Mixed,_incl._Regulation_of_cell_cycle,_and_ATP_binding_protein_MinD/FleN


id: CL:2233
description: Mixed, incl. FtsX, extracellular domain, and ABC transporter, lipoprotein release, LolD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2233_Mixed,_incl._FtsX,_extracellular_domain,_and_ABC_transporter,_lipoprotein_release,_LolD-like


id: CL:2235
description: FtsX, extracellular domain, and ABC transporter, lipoprotein release, LolD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2235_FtsX,_extracellular_domain,_and_ABC_transporter,_lipoprotein_release,_LolD-like


id: CL:2257
description: Phosphate ion transport, and Phospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2257_Phosphate_ion_transport,_and_Phospholipid_metabolism


id: CL:2275
description: Mixed, incl. Phospholipid metabolism, and Regulation of response to stress
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2275_Mixed,_incl._Phospholipid_metabolism,_and_Regulation_of_response_to_stress


id: CL:2287
description: Mixed, incl. Ribosome assembly, and NAD biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2287_Mixed,_incl._Ribosome_assembly,_and_NAD_biosynthetic_process


id: CL:229
description: Coenzyme A transferase, and Butyrate kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:229_Coenzyme_A_transferase,_and_Butyrate_kinase


id: CL:2290
description: Ribosome assembly, and NAD biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2290_Ribosome_assembly,_and_NAD_biosynthetic_process


id: CL:2311
description: Mixed, incl. DNA helicase complex, and Queuosine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2311_Mixed,_incl._DNA_helicase_complex,_and_Queuosine_biosynthesis


id: CL:2313
description: Mixed, incl. Queuosine biosynthesis, and Holliday junction helicase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2313_Mixed,_incl._Queuosine_biosynthesis,_and_Holliday_junction_helicase_complex


id: CL:2315
description: Mixed, incl. Queuosine biosynthesis, and Holliday junction helicase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2315_Mixed,_incl._Queuosine_biosynthesis,_and_Holliday_junction_helicase_complex


id: CL:2331
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2331_Mixed,_incl._Anaerobic_coproporphyrinogen-III_oxidase,_and_Metal-sensitive_transcriptional_repressor

description:
  Mixed, incl. Anaerobic coproporphyrinogen-III oxidase, and Metal-sensitive transcriptional repressor


id: CL:2347
description: Mixed, incl. Double-strand break repair, and Shikimate kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2347_Mixed,_incl._Double-strand_break_repair,_and_Shikimate_kinase


id: CL:2348
description: Mixed, incl. DUF34/NIF3 superfamily, and Polysaccharide biosynthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2348_Mixed,_incl._DUF34/NIF3_superfamily,_and_Polysaccharide_biosynthesis_protein


id: CL:2357
description: Double-strand break repair, and Shikimate kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2357_Double-strand_break_repair,_and_Shikimate_kinase


id: CL:2366
description: Mixed, incl. Sulfur relay system, and Thiamine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2366_Mixed,_incl._Sulfur_relay_system,_and_Thiamine_biosynthetic_process


id: CL:2367
description: Mixed, incl. Thiamine metabolism, and Sulfur relay system
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2367_Mixed,_incl._Thiamine_metabolism,_and_Sulfur_relay_system


id: CL:2368
description: Mixed, incl. Thiamine biosynthetic process, and ThiF family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2368_Mixed,_incl._Thiamine_biosynthetic_process,_and_ThiF_family


id: CL:2370
description: Mixed, incl. Antibiotic biosynthetic process, and Radical SAM, alpha/beta horseshoe
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2370_Mixed,_incl._Antibiotic_biosynthetic_process,_and_Radical_SAM,_alpha/beta_horseshoe


id: CL:2372
description: Mixed, incl. DsrEFH-like, and Rhodanese-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2372_Mixed,_incl._DsrEFH-like,_and_Rhodanese-like_domain


id: CL:2397
description: Thiamine biosynthetic process, and ThiF family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2397_Thiamine_biosynthetic_process,_and_ThiF_family


id: CL:2399
description: Thiamine diphosphate metabolic process, and ThiH/NocL/HydG-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2399_Thiamine_diphosphate_metabolic_process,_and_ThiH/NocL/HydG-like


id: CL:241
description: Mixed, incl. Sodium transport, and Ligase activity, forming carbon-carbon bonds
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:241_Mixed,_incl._Sodium_transport,_and_Ligase_activity,_forming_carbon-carbon_bonds


id: CL:2419
description: Mixed, incl. Sulfur relay system, and RNA capping
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2419_Mixed,_incl._Sulfur_relay_system,_and_RNA_capping


id: CL:2422
description: Transcription regulator Rrf2, and Iron-sulfur cluster assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2422_Transcription_regulator_Rrf2,_and_Iron-sulfur_cluster_assembly


id: CL:243
description: Mixed, incl. Ligase activity, forming carbon-carbon bonds, and AMP binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:243_Mixed,_incl._Ligase_activity,_forming_carbon-carbon_bonds,_and_AMP_binding


id: CL:2440
description: Mixed, incl. TusA-like domain, and Sulphur transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2440_Mixed,_incl._TusA-like_domain,_and_Sulphur_transport


id: CL:2441
description: Mixed, incl. TusA-like domain, and Sulphur transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2441_Mixed,_incl._TusA-like_domain,_and_Sulphur_transport


id: CL:2443
description: Mixed, incl. Cysteine desulfurase, and TusA-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2443_Mixed,_incl._Cysteine_desulfurase,_and_TusA-like_domain


id: CL:2466
description: Mixed, incl. LUD domain, and Putative Se/S carrier protein-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2466_Mixed,_incl._LUD_domain,_and_Putative_Se/S_carrier_protein-like


id: CL:2479
description: Mixed, incl. Alditol metabolic process, and Pantothenate and CoA biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2479_Mixed,_incl._Alditol_metabolic_process,_and_Pantothenate_and_CoA_biosynthesis


id: CL:2481
description: Mixed, incl. Alditol metabolic process, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2481_Mixed,_incl._Alditol_metabolic_process,_and_Coenzyme_A_biosynthesis


id: CL:2482
description: Alditol metabolic process, and Alkaline shock protein Asp23
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2482_Alditol_metabolic_process,_and_Alkaline_shock_protein_Asp23


id: CL:2495
description: Coenzyme A biosynthesis, and Methyltransferase small domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2495_Coenzyme_A_biosynthesis,_and_Methyltransferase_small_domain


id: CL:2512
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and VanZ-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2512_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_VanZ-like


id: CL:2513
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Putative zinc-finger
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2513_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Putative_zinc-finger


id: CL:2528
description: Mixed, incl. VanZ-like, and Ribbon-helix-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2528_Mixed,_incl._VanZ-like,_and_Ribbon-helix-helix


id: CL:2540
description: Mixed, incl. N-acyltransferase activity, and Chorismate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2540_Mixed,_incl._N-acyltransferase_activity,_and_Chorismate_metabolic_process


id: CL:2541
description: Mixed, incl. N-acyltransferase activity, and Chorismate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2541_Mixed,_incl._N-acyltransferase_activity,_and_Chorismate_metabolic_process


id: CL:2542
description: N-acyltransferase activity, and Chorismate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2542_N-acyltransferase_activity,_and_Chorismate_metabolic_process


id: CL:2544
description: N-acyltransferase activity, and Chorismate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2544_N-acyltransferase_activity,_and_Chorismate_metabolic_process


id: CL:2545
description: N-acyltransferase activity, and Chorismate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2545_N-acyltransferase_activity,_and_Chorismate_metabolic_process


id: CL:2547
description: N-acyltransferase activity, and Chorismate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2547_N-acyltransferase_activity,_and_Chorismate_metabolic_process


id: CL:2548
description: N-acyltransferase activity, and Chorismate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2548_N-acyltransferase_activity,_and_Chorismate_metabolic_process


id: CL:2549
description: GNAT domain, and Cupin 2, conserved barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2549_GNAT_domain,_and_Cupin_2,_conserved_barrel


id: CL:2551
description: GNAT domain, and Cupin 2, conserved barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2551_GNAT_domain,_and_Cupin_2,_conserved_barrel


id: CL:2554
description: Cupin 2, conserved barrel, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2554_Cupin_2,_conserved_barrel,_and_Acetyltransferase_(GNAT)_domain


id: CL:2571
description: Mixed, incl. UDP-N-acetylglucosamine metabolic process, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2571_Mixed,_incl._UDP-N-acetylglucosamine_metabolic_process,_and_Acetyltransferase_(GNAT)_domain


id: CL:2591
description: Chorismate metabolic process, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2591_Chorismate_metabolic_process,_and_Acetyltransferase_(GNAT)_domain


id: CL:2617
description: Mixed, incl. Xylose isomerase-like superfamily, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2617_Mixed,_incl._Xylose_isomerase-like_superfamily,_and_Acetyltransferase_(GNAT)_domain


id: CL:2632
description: Mixed, incl. Ketone catabolic process, and Alkylbase DNA N-glycosylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2632_Mixed,_incl._Ketone_catabolic_process,_and_Alkylbase_DNA_N-glycosylase_activity


id: CL:264
description: Mixed, incl. Glycine catabolic process, and Glutamate-ammonia ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:264_Mixed,_incl._Glycine_catabolic_process,_and_Glutamate-ammonia_ligase_activity


id: CL:2643
description: Mixed, incl. Acetyltransferase (GNAT) domain, and NUDIX hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2643_Mixed,_incl._Acetyltransferase_(GNAT)_domain,_and_NUDIX_hydrolase


id: CL:2665
description: Mixed, incl. Serine aminopeptidase, S33, and Zinc ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2665_Mixed,_incl._Serine_aminopeptidase,_S33,_and_Zinc_ion_transport


id: CL:2677
description: Mixed, incl. Peptidase family S66, and Nucleotidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2677_Mixed,_incl._Peptidase_family_S66,_and_Nucleotidase_activity


id: CL:2688
description: Proton-transporting two-sector ATPase complex, and Chloride transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2688_Proton-transporting_two-sector_ATPase_complex,_and_Chloride_transport


id: CL:2689
description: Proton-transporting two-sector ATPase complex, and Chloride transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2689_Proton-transporting_two-sector_ATPase_complex,_and_Chloride_transport


id: CL:2691
description: Proton-transporting two-sector ATPase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2691_Proton-transporting_two-sector_ATPase_complex


id: CL:2695
description: ATP synthesis, and ATP synthase subunit C
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2695_ATP_synthesis,_and_ATP_synthase_subunit_C


id: CL:2710
description: Proton-transporting two-sector ATPase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2710_Proton-transporting_two-sector_ATPase_complex


id: CL:2727
description: Chloride transport, and TrkA-C domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2727_Chloride_transport,_and_TrkA-C_domain


id: CL:2738
description: HTH ArsR-type DNA-binding domain, and 6-O-methylguanine DNA methyltransferase, DNA binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2738_HTH_ArsR-type_DNA-binding_domain,_and_6-O-methylguanine_DNA_methyltransferase,_DNA_binding_domain


id: CL:2748
description: Mixed, incl. PHP domain, and Peptidase S26
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2748_Mixed,_incl._PHP_domain,_and_Peptidase_S26


id: CL:2752
description: Mixed, incl. Peptidase S26, and Regulation of RNA stability
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2752_Mixed,_incl._Peptidase_S26,_and_Regulation_of_RNA_stability


id: CL:2771
description: Mixed, incl. Terpenoid backbone biosynthesis, and Lipoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2771_Mixed,_incl._Terpenoid_backbone_biosynthesis,_and_Lipoprotein


id: CL:2774
description: Mixed, incl. Prenyltransferase activity, and Lipoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2774_Mixed,_incl._Prenyltransferase_activity,_and_Lipoprotein


id: CL:2800
description: Mixed, incl. Amidohydrolase, and Metallopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2800_Mixed,_incl._Amidohydrolase,_and_Metallopeptidase_activity


id: CL:2801
description: Mixed, incl. Amidohydrolase, and Metallopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2801_Mixed,_incl._Amidohydrolase,_and_Metallopeptidase_activity


id: CL:2802
description: Mixed, incl. Amidohydrolase, and Peptidase M28 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2802_Mixed,_incl._Amidohydrolase,_and_Peptidase_M28_family


id: CL:2805
description: Amidohydrolase, and Peptidase M28 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2805_Amidohydrolase,_and_Peptidase_M28_family


id: CL:2830
description: Mixed, incl. CGCAxxGCC motif, and Extracellular space
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2830_Mixed,_incl._CGCAxxGCC_motif,_and_Extracellular_space


id: CL:2845
description: Mixed, incl. RimK-like ATP-grasp domain, and SEC-C motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2845_Mixed,_incl._RimK-like_ATP-grasp_domain,_and_SEC-C_motif


id: CL:285
description: Mixed, incl. 2 iron, 2 sulfur cluster binding, and Quinone binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:285_Mixed,_incl._2_iron,_2_sulfur_cluster_binding,_and_Quinone_binding


id: CL:2857
description: Mostly uncharacterized, incl. Secondary metabolic process, and AsnC-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2857_Mostly_uncharacterized,_incl._Secondary_metabolic_process,_and_AsnC-type_HTH_domain


id: CL:2858
description: Mixed, incl. Radical SAM, and AsnC-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2858_Mixed,_incl._Radical_SAM,_and_AsnC-type_HTH_domain


id: CL:2859
description: Mixed, incl. Protein dephosphorylation, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2859_Mixed,_incl._Protein_dephosphorylation,_and_4Fe-4S_dicluster_domain


id: CL:2861
description: Mixed, incl. Protein dephosphorylation, and Peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2861_Mixed,_incl._Protein_dephosphorylation,_and_Peptidase_activity


id: CL:287
description: Mixed, incl. 2 iron, 2 sulfur cluster binding, and Quinone binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:287_Mixed,_incl._2_iron,_2_sulfur_cluster_binding,_and_Quinone_binding


id: CL:2883
description: Bacteriocin metabolic process, and AsnC-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2883_Bacteriocin_metabolic_process,_and_AsnC-type_HTH_domain


id: CL:2897
description: Mixed, incl. Peptidase C69, dipeptidase A, and ArsC family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2897_Mixed,_incl._Peptidase_C69,_dipeptidase_A,_and_ArsC_family


id: CL:2923
description: Signal transduction, and Cilium
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2923_Signal_transduction,_and_Cilium


id: CL:2924
description: Signal transduction, and Cilium
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2924_Signal_transduction,_and_Cilium


id: CL:2928
description: Bacterial chemotaxis, and GGDEF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2928_Bacterial_chemotaxis,_and_GGDEF_domain


id: CL:2931
description: Bacterial chemotaxis, and GGDEF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2931_Bacterial_chemotaxis,_and_GGDEF_domain


id: CL:2935
description: Bacterial chemotaxis, and GGDEF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2935_Bacterial_chemotaxis,_and_GGDEF_domain


id: CL:2940
description: Bacterial chemotaxis, and GGDEF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2940_Bacterial_chemotaxis,_and_GGDEF_domain


id: CL:2945
description: Bacterial chemotaxis, and GGDEF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2945_Bacterial_chemotaxis,_and_GGDEF_domain


id: CL:2956
description: Mixed, incl. Chemotaxis receptor methyltransferase CheR, N-terminal, and Demethylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2956_Mixed,_incl._Chemotaxis_receptor_methyltransferase_CheR,_N-terminal,_and_Demethylation


id: CL:2957
description: Mixed, incl. CheW-like domain, and Chemotaxis receptor methyltransferase CheR, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2957_Mixed,_incl._CheW-like_domain,_and_Chemotaxis_receptor_methyltransferase_CheR,_N-terminal


id: CL:2968
description: Mixed, incl. Chemotaxis protein methyltransferase CheR, and Demethylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2968_Mixed,_incl._Chemotaxis_protein_methyltransferase_CheR,_and_Demethylation


id: CL:2978
description: CheW-like domain, and Demethylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2978_CheW-like_domain,_and_Demethylation


id: CL:2990
description: Mixed, incl. Chemotaxis protein methyltransferase CheR, and CheY-binding domain of CheA
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:2990_Mixed,_incl._Chemotaxis_protein_methyltransferase_CheR,_and_CheY-binding_domain_of_CheA


id: CL:3023
description: Mixed, incl. EAL domain, and GAF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3023_Mixed,_incl._EAL_domain,_and_GAF_domain


id: CL:3081
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3081_Two-component_regulatory_system,_and_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain

description:
  Two-component regulatory system, and Signal transduction histidine kinase, dimerisation/phosphoacceptor domain


id: CL:3082
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3082_Two-component_regulatory_system,_and_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain

description:
  Two-component regulatory system, and Signal transduction histidine kinase, dimerisation/phosphoacceptor domain


id: CL:3084
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3084_Two-component_regulatory_system,_and_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain

description:
  Two-component regulatory system, and Signal transduction histidine kinase, dimerisation/phosphoacceptor domain


id: CL:3086
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3086_Two-component_regulatory_system,_and_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain

description:
[cell repeats an earlier one in this file: 110 characters]


id: CL:3088
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3088_Two-component_regulatory_system,_and_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain

description:
[cell repeats an earlier one in this file: 110 characters]


id: CL:3090
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3090_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain,_and_OmpR/PhoB-type_DNA-binding_domain

description:
  Signal transduction histidine kinase, dimerisation/phosphoacceptor domain, and OmpR/PhoB-type DNA-binding domain


id: CL:3092
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3092_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain,_and_OmpR/PhoB-type_DNA-binding_domain

description:
  Signal transduction histidine kinase, dimerisation/phosphoacceptor domain, and OmpR/PhoB-type DNA-binding domain


id: CL:3106
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3106_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain,_and_OmpR/PhoB-type_DNA-binding_domain

description:
  Signal transduction histidine kinase, dimerisation/phosphoacceptor domain, and OmpR/PhoB-type DNA-binding domain


id: CL:3132
description: Two-component regulatory system
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3132_Two-component_regulatory_system


id: CL:315
description: Fatty acid biosynthesis, and Monocarboxylic acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:315_Fatty_acid_biosynthesis,_and_Monocarboxylic_acid_biosynthetic_process


id: CL:316
description: Fatty acid biosynthesis, and ACP-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:316_Fatty_acid_biosynthesis,_and_ACP-like_superfamily


id: CL:3164
description: YcbB domain, and Signal transduction histidine kinase-related protein, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3164_YcbB_domain,_and_Signal_transduction_histidine_kinase-related_protein,_C-terminal


id: CL:3188
description: Cilium, and Bacterial-type flagellum organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3188_Cilium,_and_Bacterial-type_flagellum_organization


id: CL:319
description: Fatty acid biosynthesis, and HotDog domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:319_Fatty_acid_biosynthesis,_and_HotDog_domain_superfamily


id: CL:3190
description: Cilium, and Cytotoxic necrotizing factor-like, catalytic
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3190_Cilium,_and_Cytotoxic_necrotizing_factor-like,_catalytic


id: CL:3197
description: Bacterial-type flagellum basal body, and Bacterial flagellum protein export
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3197_Bacterial-type_flagellum_basal_body,_and_Bacterial_flagellum_protein_export


id: CL:3198
description: Bacterial-type flagellum basal body
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3198_Bacterial-type_flagellum_basal_body


id: CL:3200
description: Flagellar basal-body rod protein FlgB, and Flagellar basal body rod protein, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3200_Flagellar_basal-body_rod_protein_FlgB,_and_Flagellar_basal_body_rod_protein,_conserved_site


id: CL:3217
description: Bacterial flagellum protein export, and Bacterial-type flagellum assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3217_Bacterial_flagellum_protein_export,_and_Bacterial-type_flagellum_assembly


id: CL:322
description: Fatty acid metabolism, and Fatty acid synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:322_Fatty_acid_metabolism,_and_Fatty_acid_synthase_activity


id: CL:3237
description: Cytoskeletal motor activity, and Bacterial-type flagellum-dependent swarming motility
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3237_Cytoskeletal_motor_activity,_and_Bacterial-type_flagellum-dependent_swarming_motility


id: CL:3253
description: Mixed, incl. ATP binding protein MinD/FleN, and Cytotoxic necrotizing factor-like, catalytic
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3253_Mixed,_incl._ATP_binding_protein_MinD/FleN,_and_Cytotoxic_necrotizing_factor-like,_catalytic


id: CL:3264
description: Bacterial flagellum biogenesis, and Secreted
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3264_Bacterial_flagellum_biogenesis,_and_Secreted


id: CL:3266
description: Flagellar protein FliS, and Secreted
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3266_Flagellar_protein_FliS,_and_Secreted


id: CL:3290
description: Mixed, incl. RNA-binding protein KhpB, N-terminal, and Lytic endotransglycosylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3290_Mixed,_incl._RNA-binding_protein_KhpB,_N-terminal,_and_Lytic_endotransglycosylase_activity


id: CL:3301
description: HD-GYP domain, and Diguanylate cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3301_HD-GYP_domain,_and_Diguanylate_cyclase_activity


id: CL:3322
description: Sigma-54 interaction domain, ATP-binding site 1, and Aspartate racemase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3322_Sigma-54_interaction_domain,_ATP-binding_site_1,_and_Aspartate_racemase


id: CL:3325
description: DNA binding HTH domain, Fis-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3325_DNA_binding_HTH_domain,_Fis-type


id: CL:3330
description: Sigma-54 interaction domain, ATP-binding site 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3330_Sigma-54_interaction_domain,_ATP-binding_site_2


id: CL:3354
description: Mixed, incl. Cache domain, and NTP pyrophosphohydrolase MazG, putative catalytic core
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3354_Mixed,_incl._Cache_domain,_and_NTP_pyrophosphohydrolase_MazG,_putative_catalytic_core


id: CL:3364
description: Mixed, incl. HxlR-like helix-turn-helix, and Pyridoxamine 5-phosphate oxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3364_Mixed,_incl._HxlR-like_helix-turn-helix,_and_Pyridoxamine_5-phosphate_oxidase


id: CL:3377
description: Sensor histidine kinase NatK, C-terminal domain, and LytTr DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3377_Sensor_histidine_kinase_NatK,_C-terminal_domain,_and_LytTr_DNA-binding_domain


id: CL:3379
description: Sensor histidine kinase NatK, C-terminal domain, and LytTr DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3379_Sensor_histidine_kinase_NatK,_C-terminal_domain,_and_LytTr_DNA-binding_domain


id: CL:3381
description: Sensor histidine kinase NatK, C-terminal domain, and Quorum sensing
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3381_Sensor_histidine_kinase_NatK,_C-terminal_domain,_and_Quorum_sensing


id: CL:3417
description: Mixed, incl. Iron hydrogenase, and 2 iron, 2 sulfur cluster binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3417_Mixed,_incl._Iron_hydrogenase,_and_2_iron,_2_sulfur_cluster_binding


id: CL:3419
description: Mixed, incl. DRTGG domain, and NuoE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3419_Mixed,_incl._DRTGG_domain,_and_NuoE_domain


id: CL:3441
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3441_Biotin_and_thiamin_synthesis-associated_domain,_and_Acetolactate_synthase/Transcription_factor_NikR,_C-terminal

description:
  Biotin and thiamin synthesis-associated domain, and Acetolactate synthase/Transcription factor NikR, C-terminal


id: CL:3450
description: Mixed, incl. PAS domain, and Domain of unknown function DUF1858
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3450_Mixed,_incl._PAS_domain,_and_Domain_of_unknown_function_DUF1858


id: CL:3466
description: Mixed, incl. Sulfatase, N-terminal, and Cytolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3466_Mixed,_incl._Sulfatase,_N-terminal,_and_Cytolysis


id: CL:3479
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3479_Mixed,_incl._Bacterial_regulatory_proteins,_luxR_family,_and_Helix-turn-helix_XRE-family_like_proteins

description:
  Mixed, incl. Bacterial regulatory proteins, luxR family, and Helix-turn-helix XRE-family like proteins


id: CL:3495
description: Mixed, incl. Protein of unknown function DUF1848, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3495_Mixed,_incl._Protein_of_unknown_function_DUF1848,_and_Signal


id: CL:3507
description: Mixed, incl. Bacterial secretion system, and Horizontal gene transfer
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3507_Mixed,_incl._Bacterial_secretion_system,_and_Horizontal_gene_transfer


id: CL:3508
description: Mixed, incl. Bacterial secretion system, and Horizontal gene transfer
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3508_Mixed,_incl._Bacterial_secretion_system,_and_Horizontal_gene_transfer


id: CL:3509
description: Mixed, incl. Pilus organization, and Horizontal gene transfer
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3509_Mixed,_incl._Pilus_organization,_and_Horizontal_gene_transfer


id: CL:351
description: Biotin biosynthesis, and Mycolic acid cyclopropane synthetase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:351_Biotin_biosynthesis,_and_Mycolic_acid_cyclopropane_synthetase


id: CL:3510
description: Mixed, incl. Pilus organization, and Prokaryotic N-terminal methylation site
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3510_Mixed,_incl._Pilus_organization,_and_Prokaryotic_N-terminal_methylation_site


id: CL:3512
description: Type II/IV secretion system protein, and Type II secretion system (T2SS), protein F
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3512_Type_II/IV_secretion_system_protein,_and_Type_II_secretion_system_(T2SS),_protein_F


id: CL:3529
description: Pilin-like, and Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3529_Pilin-like,_and_Peptidase_M24B,_X-Pro_dipeptidase/aminopeptidase_P,_conserved_site


id: CL:3540
description: Horizontal gene transfer, and Magnesium-chelatase subunit ChlI-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3540_Horizontal_gene_transfer,_and_Magnesium-chelatase_subunit_ChlI-like


id: CL:3554
description: Mixed, incl. RNA polymerase sigma-70, and Peptidase U32
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3554_Mixed,_incl._RNA_polymerase_sigma-70,_and_Peptidase_U32


id: CL:3556
description: Mixed, incl. Peptidase U32, and O-methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3556_Mixed,_incl._Peptidase_U32,_and_O-methyltransferase_activity


id: CL:3566
description: RNA polymerase sigma-70, and Deubiquitinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3566_RNA_polymerase_sigma-70,_and_Deubiquitinase_activity


id: CL:3576
description: Mixed, incl. SAF domain, and Type II secretion system (T2SS), protein F
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3576_Mixed,_incl._SAF_domain,_and_Type_II_secretion_system_(T2SS),_protein_F


id: CL:3599
description: Mixed, incl. Anaerobic sulphatase maturase, radical SAM, and Regulation of cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3599_Mixed,_incl._Anaerobic_sulphatase_maturase,_radical_SAM,_and_Regulation_of_cell_division


id: CL:360
description: Mixed, incl. Carbohydrate catabolic process, and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:360_Mixed,_incl._Carbohydrate_catabolic_process,_and_Pentose_phosphate_pathway


id: CL:361
description: Mixed, incl. Glycolytic process, and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:361_Mixed,_incl._Glycolytic_process,_and_Pentose_phosphate_pathway


id: CL:3610
description: Mixed, incl. Cell differentiation, and Transmembrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3610_Mixed,_incl._Cell_differentiation,_and_Transmembrane


id: CL:3611
description: Mixed, incl. Cell differentiation, and Transmembrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3611_Mixed,_incl._Cell_differentiation,_and_Transmembrane


id: CL:3612
description: Mixed, incl. Cell differentiation, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3612_Mixed,_incl._Cell_differentiation,_and_DNA_replication


id: CL:3613
description: Mixed, incl. Cell differentiation, and Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3613_Mixed,_incl._Cell_differentiation,_and_Chromosome_segregation


id: CL:3614
description: Cell differentiation, and Protein of unknown function DUF421
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3614_Cell_differentiation,_and_Protein_of_unknown_function_DUF421


id: CL:3615
description: Cell differentiation, and Protein of unknown function DUF1256
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3615_Cell_differentiation,_and_Protein_of_unknown_function_DUF1256


id: CL:3616
description: Cell differentiation, and Protein of unknown function DUF1256
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3616_Cell_differentiation,_and_Protein_of_unknown_function_DUF1256


id: CL:3619
description: Cell differentiation, and Protein of unknown function DUF1256
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3619_Cell_differentiation,_and_Protein_of_unknown_function_DUF1256


id: CL:3627
description: Mixed, incl. Sporulation, and RNA polymerase sigma-70 region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3627_Mixed,_incl._Sporulation,_and_RNA_polymerase_sigma-70_region_4


id: CL:3629
description: Mixed, incl. Sporulation, and RNA polymerase sigma-70 region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3629_Mixed,_incl._Sporulation,_and_RNA_polymerase_sigma-70_region_4


id: CL:363
description: Glycolysis, and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:363_Glycolysis,_and_Pentose_phosphate_pathway


id: CL:3631
description: Mixed, incl. Sporulation, and RNA polymerase sigma-B/F/G type
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3631_Mixed,_incl._Sporulation,_and_RNA_polymerase_sigma-B/F/G_type


id: CL:366
description: Glycolysis, and Glyceraldehyde-3-phosphate dehydrogenase, type I
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:366_Glycolysis,_and_Glyceraldehyde-3-phosphate_dehydrogenase,_type_I


id: CL:3664
description: Stage III sporulation protein AC/AD family, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3664_Stage_III_sporulation_protein_AC/AD_family,_and_Sporulation


id: CL:3667
description: Stage III sporulation protein AC/AD family, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3667_Stage_III_sporulation_protein_AC/AD_family,_and_Sporulation


id: CL:3699
description: Spore germination, and Small acid-soluble spore protein, alpha/beta-type, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3699_Spore_germination,_and_Small_acid-soluble_spore_protein,_alpha/beta-type,_conserved_site


id: CL:3717
description: Mixed, incl. Spore germination GerAB, and Peptidase S16, active site
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3717_Mixed,_incl._Spore_germination_GerAB,_and_Peptidase_S16,_active_site


id: CL:3747
description: Mixed, incl. Spore germination, and ABC transporter transmembrane region
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3747_Mixed,_incl._Spore_germination,_and_ABC_transporter_transmembrane_region


id: CL:3748
description: Spore germination, and ABC transporter transmembrane region
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3748_Spore_germination,_and_ABC_transporter_transmembrane_region


id: CL:3759
description: Mixed, incl. DNA-(apurinic or apyrimidinic site) endonuclease activity, and FR47-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3759_Mixed,_incl._DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity,_and_FR47-like


id: CL:3768
description: Mixed, incl. Protein of unknown function DUF421, and Protein of unknown function DUF4363
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3768_Mixed,_incl._Protein_of_unknown_function_DUF421,_and_Protein_of_unknown_function_DUF4363


id: CL:3784
description: Mixed, incl. Chromosome partition, and FAD binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3784_Mixed,_incl._Chromosome_partition,_and_FAD_binding_domain


id: CL:3786
description: Mixed, incl. Chromosome partition, and RecF/RecN/SMC N terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3786_Mixed,_incl._Chromosome_partition,_and_RecF/RecN/SMC_N_terminal_domain


id: CL:3800
description: Mixed, incl. FAD binding domain, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3800_Mixed,_incl._FAD_binding_domain,_and_AAA_domain


id: CL:3814
description: Mostly uncharacterized, incl. GerMN domain, and protein-DNA complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3814_Mostly_uncharacterized,_incl._GerMN_domain,_and_protein-DNA_complex


id: CL:3815
description: Mostly uncharacterized, incl. GerMN domain, and Primosome complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3815_Mostly_uncharacterized,_incl._GerMN_domain,_and_Primosome_complex


id: CL:3816
description: Mostly uncharacterized, incl. Primosome complex, and ELP3/YhcC
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3816_Mostly_uncharacterized,_incl._Primosome_complex,_and_ELP3/YhcC


id: CL:3817
description: Mostly uncharacterized, incl. Primosome complex, and ELP3/YhcC
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3817_Mostly_uncharacterized,_incl._Primosome_complex,_and_ELP3/YhcC


id: CL:3819
description: Mixed, incl. SIS domain, and DNA replication initiation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3819_Mixed,_incl._SIS_domain,_and_DNA_replication_initiation


id: CL:3839
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3839_Mixed,_incl._Putative_amidase_domain,_and_Hedgehog_signalling/DD-peptidase_zinc-binding_domain_superfamily

description:
  Mixed, incl. Putative amidase domain, and Hedgehog signalling/DD-peptidase zinc-binding domain superfamily


id: CL:3853
description: Mixed, incl. Helix-hairpin-helix motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3853_Mixed,_incl._Helix-hairpin-helix_motif


id: CL:3865
description: Mostly uncharacterized, incl. GerMN domain, and Peptidase S1C
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3865_Mostly_uncharacterized,_incl._GerMN_domain,_and_Peptidase_S1C


id: CL:3866
description: Mixed, incl. GerMN domain, and MobA-like NTP transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3866_Mixed,_incl._GerMN_domain,_and_MobA-like_NTP_transferase


id: CL:3868
description: Mixed, incl. GerMN domain, and Ligase activity, forming nitrogen-metal bonds
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3868_Mixed,_incl._GerMN_domain,_and_Ligase_activity,_forming_nitrogen-metal_bonds


id: CL:3883
description: Mixed, incl. MobA-like NTP transferase, and Response to osmotic stress
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3883_Mixed,_incl._MobA-like_NTP_transferase,_and_Response_to_osmotic_stress


id: CL:3894
description: Mixed, incl. Peptidase S1C, and tRNA 3-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3894_Mixed,_incl._Peptidase_S1C,_and_tRNA_3-end_processing


id: CL:3906
description: Mostly uncharacterized, incl. Putative adhesin, and LSM domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3906_Mostly_uncharacterized,_incl._Putative_adhesin,_and_LSM_domain_superfamily


id: CL:3908
description: Mixed, incl. LSM domain superfamily, and DHH family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3908_Mixed,_incl._LSM_domain_superfamily,_and_DHH_family


id: CL:3924
description: Mixed, incl. Putative adhesin, and Kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3924_Mixed,_incl._Putative_adhesin,_and_Kinase_activity


id: CL:393
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:393_Mixed,_incl._D-isomer_specific_2-hydroxyacid_dehydrogenase,_catalytic_domain,_and_Phosphoglycerate/bisphosphoglycerate_mutase,_active_site

description:
  Mixed, incl. D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain, and Phosphoglycerate/bisphosphoglycerate mutase, active site


id: CL:3933
description: Mostly uncharacterized, incl. Zn_pept, and Peptidase U32
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3933_Mostly_uncharacterized,_incl._Zn_pept,_and_Peptidase_U32


id: CL:3934
description: Mostly uncharacterized, incl. Zn_pept, and ComA-like, MBL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3934_Mostly_uncharacterized,_incl._Zn_pept,_and_ComA-like,_MBL_domain


id: CL:3936
description: Mixed, incl. Zn_pept, and Cell Wall Hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3936_Mixed,_incl._Zn_pept,_and_Cell_Wall_Hydrolase


id: CL:3950
description: Mixed, incl. Transcription regulator HTH, GntR, and ABC transporter-like, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3950_Mixed,_incl._Transcription_regulator_HTH,_GntR,_and_ABC_transporter-like,_ATP-binding_domain


id: CL:3959
description: Mixed, incl. Peptidase U32, and Domain of unknown function DUF5668
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3959_Mixed,_incl._Peptidase_U32,_and_Domain_of_unknown_function_DUF5668


id: CL:3969
description: Mixed, incl. Other glycan degradation, and HD-GYP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3969_Mixed,_incl._Other_glycan_degradation,_and_HD-GYP_domain


id: CL:3987
description: Mixed, incl. Signal, and DNA-templated transcription, initiation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3987_Mixed,_incl._Signal,_and_DNA-templated_transcription,_initiation


id: CL:3988
description: Mixed, incl. Signal, and DNA-templated transcription, initiation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3988_Mixed,_incl._Signal,_and_DNA-templated_transcription,_initiation


id: CL:3989
description: Mixed, incl. S-layer homology domain, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3989_Mixed,_incl._S-layer_homology_domain,_and_Signal


id: CL:3990
description: Mixed, incl. S-layer homology domain, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3990_Mixed,_incl._S-layer_homology_domain,_and_Signal


id: CL:3991
description: Mixed, incl. S-layer homology domain, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3991_Mixed,_incl._S-layer_homology_domain,_and_Signal


id: CL:3992
description: Mixed, incl. S-layer homology domain, and Glycoside hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3992_Mixed,_incl._S-layer_homology_domain,_and_Glycoside_hydrolase_superfamily


id: CL:3993
description: Mixed, incl. S-layer homology domain, and Glycoside hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3993_Mixed,_incl._S-layer_homology_domain,_and_Glycoside_hydrolase_superfamily


id: CL:3995
description: Mixed, incl. S-layer homology domain, and SbsA, Ig-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3995_Mixed,_incl._S-layer_homology_domain,_and_SbsA,_Ig-like_domain


id: CL:3997
description: Mixed, incl. S-layer homology domain, and SbsA, Ig-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3997_Mixed,_incl._S-layer_homology_domain,_and_SbsA,_Ig-like_domain


id: CL:3999
description: Mixed, incl. Peptidase S8/S53 domain superfamily, and SbsA, Ig-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:3999_Mixed,_incl._Peptidase_S8/S53_domain_superfamily,_and_SbsA,_Ig-like_domain


id: CL:4002
description: Mixed, incl. Peptidase S8/S53 domain superfamily, and SbsA, Ig-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4002_Mixed,_incl._Peptidase_S8/S53_domain_superfamily,_and_SbsA,_Ig-like_domain


id: CL:4004
description: Peptidase S8/S53 domain superfamily, and SbsA, Ig-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4004_Peptidase_S8/S53_domain_superfamily,_and_SbsA,_Ig-like_domain


id: CL:4006
description: Peptidase S8/S53 domain superfamily, and SbsA, Ig-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4006_Peptidase_S8/S53_domain_superfamily,_and_SbsA,_Ig-like_domain


id: CL:4051
description: S-layer homology domain, and Fibronectin type III superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4051_S-layer_homology_domain,_and_Fibronectin_type_III_superfamily


id: CL:4054
description: S-layer homology domain, and Phosphodiester glycosidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4054_S-layer_homology_domain,_and_Phosphodiester_glycosidase


id: CL:4056
description: Secretion of lysosomal enzymes, and S-layer homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4056_Secretion_of_lysosomal_enzymes,_and_S-layer_homology_domain


id: CL:407
description: Gfo/Idh/MocA-like oxidoreductase, N-terminal, and Aldehyde dehydrogenase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:407_Gfo/Idh/MocA-like_oxidoreductase,_N-terminal,_and_Aldehyde_dehydrogenase_domain


id: CL:4071
description: Lysozyme activity, and Pentose and glucuronate interconversions
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4071_Lysozyme_activity,_and_Pentose_and_glucuronate_interconversions


id: CL:4087
description: Mixed, incl. Fibronectin type III superfamily, and Bacterial SH3 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4087_Mixed,_incl._Fibronectin_type_III_superfamily,_and_Bacterial_SH3_domain


id: CL:4109
description: Mixed, incl. Chitinase II, and Putative amidase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4109_Mixed,_incl._Chitinase_II,_and_Putative_amidase_domain


id: CL:4111
description: Chitinase II, and NodB homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4111_Chitinase_II,_and_NodB_homology_domain


id: CL:4128
description: Mixed, incl. Dimeric alpha-beta barrel, and Phosphodiester glycosidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4128_Mixed,_incl._Dimeric_alpha-beta_barrel,_and_Phosphodiester_glycosidase


id: CL:4137
description: Mostly uncharacterized, incl. Cation efflux family, and Zinc finger, CHC2-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4137_Mostly_uncharacterized,_incl._Cation_efflux_family,_and_Zinc_finger,_CHC2-type


id: CL:4138
description: Mixed, incl. Cation efflux family, and Zinc finger, CHC2-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4138_Mixed,_incl._Cation_efflux_family,_and_Zinc_finger,_CHC2-type


id: CL:4151
description: Mixed, incl. Listeria/Bacterioides repeat, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4151_Mixed,_incl._Listeria/Bacterioides_repeat,_and_Signal


id: CL:4162
description: Mixed, incl. WG containing repeat, and Protein of unknown function DUF1848
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4162_Mixed,_incl._WG_containing_repeat,_and_Protein_of_unknown_function_DUF1848


id: CL:4171
description: Mixed, incl. RNA polymerase sigma-70 like, and Lipoprotein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4171_Mixed,_incl._RNA_polymerase_sigma-70_like,_and_Lipoprotein_transport


id: CL:4172
description: Mixed, incl. RNA polymerase sigma-70 like, and Putative zinc-finger
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4172_Mixed,_incl._RNA_polymerase_sigma-70_like,_and_Putative_zinc-finger


id: CL:4174
description: Mixed, incl. RNA polymerase sigma-70 like, and Putative zinc-finger
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4174_Mixed,_incl._RNA_polymerase_sigma-70_like,_and_Putative_zinc-finger


id: CL:4175
description: Mixed, incl. RNA polymerase sigma-70 like, and Putative zinc-finger
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4175_Mixed,_incl._RNA_polymerase_sigma-70_like,_and_Putative_zinc-finger


id: CL:4177
description: RNA polymerase sigma-70 like, and Sigma factor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4177_RNA_polymerase_sigma-70_like,_and_Sigma_factor_activity


id: CL:4198
description: Mixed, incl. ABC-2 family transporter protein, and RNA polymerase sigma-70 like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4198_Mixed,_incl._ABC-2_family_transporter_protein,_and_RNA_polymerase_sigma-70_like


id: CL:4219
description: Mixed, incl. Lipoprotein transport, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4219_Mixed,_incl._Lipoprotein_transport,_and_Sigma-70,_region_4


id: CL:4220
description: Lipoprotein transport, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4220_Lipoprotein_transport,_and_Sigma-70,_region_4


id: CL:4231
description: Mixed, incl. SH3-like domain, bacterial-type, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4231_Mixed,_incl._SH3-like_domain,_bacterial-type,_and_Signal


id: CL:4241
description: Cell death, and Deacetylase PdaC
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4241_Cell_death,_and_Deacetylase_PdaC


id: CL:425
description: Alpha-amino acid metabolic process, and Aminotransferase, class I/classII
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:425_Alpha-amino_acid_metabolic_process,_and_Aminotransferase,_class_I/classII


id: CL:4257
description: Mixed, incl. CAP domain, and RNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4257_Mixed,_incl._CAP_domain,_and_RNA_ligase_activity


id: CL:427
description: Alpha-amino acid biosynthetic process, and Pyridoxal phosphate binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:427_Alpha-amino_acid_biosynthetic_process,_and_Pyridoxal_phosphate_binding


id: CL:4273
description: ABC transporters, and Quorum sensing
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4273_ABC_transporters,_and_Quorum_sensing


id: CL:4274
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4274_Mixed,_incl._Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis,_and_ABC_transporter-like,_ATP-binding_domain

description:
  Mixed, incl. Latent infection - Other responses of Mtb to phagocytosis, and ABC transporter-like, ATP-binding domain


id: CL:4275
description: Quorum sensing, and ABC transporters
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4275_Quorum_sensing,_and_ABC_transporters


id: CL:4276
description: Latent infection - Other responses of Mtb to phagocytosis, and Amide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4276_Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis,_and_Amide_transport


id: CL:4278
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4278_Nickel_cation_transmembrane_transporter_activity,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
  Nickel cation transmembrane transporter activity, and Oligopeptide/dipeptide ABC transporter, C-terminal


id: CL:4279
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4279_Nickel_cation_transmembrane_transporter_activity,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
  Nickel cation transmembrane transporter activity, and Oligopeptide/dipeptide ABC transporter, C-terminal


id: CL:4280
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4280_Nickel_cation_transmembrane_transporter_activity,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
  Nickel cation transmembrane transporter activity, and Oligopeptide/dipeptide ABC transporter, C-terminal


id: CL:4281
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4281_Oligopeptide/dipeptide_ABC_transporter,_C-terminal,_and_Nickel_cation_transmembrane_transporter_activity

description:
  Oligopeptide/dipeptide ABC transporter, C-terminal, and Nickel cation transmembrane transporter activity


id: CL:4282
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4282_Oligopeptide/dipeptide_transporter,_C-terminal_region,_and_Nickel_cation_transmembrane_transporter_activity

description:
  Oligopeptide/dipeptide transporter, C-terminal region, and Nickel cation transmembrane transporter activity


id: CL:4283
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4283_Oligopeptide/dipeptide_transporter,_C-terminal_region,_and_Oligopeptide_transport_permease_C-like,_N-terminal_domain

description:
  Oligopeptide/dipeptide transporter, C-terminal region, and Oligopeptide transport permease C-like, N-terminal domain


id: CL:4284
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4284_Oligopeptide/dipeptide_transporter,_C-terminal_region,_and_Oligopeptide_transport_permease_C-like,_N-terminal_domain

description:
  Oligopeptide/dipeptide transporter, C-terminal region, and Oligopeptide transport permease C-like, N-terminal domain


id: CL:429
description: Alpha-amino acid biosynthetic process, and Pyridoxal phosphate binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:429_Alpha-amino_acid_biosynthetic_process,_and_Pyridoxal_phosphate_binding


id: CL:4293
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4293_Oligopeptide/dipeptide_transporter,_C-terminal_region,_and_Oligopeptide_transport_permease_C-like,_N-terminal_domain

description:
  Oligopeptide/dipeptide transporter, C-terminal region, and Oligopeptide transport permease C-like, N-terminal domain


id: CL:430
description: Cysteine and methionine metabolism, and Threonine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:430_Cysteine_and_methionine_metabolism,_and_Threonine_metabolic_process


id: CL:4302
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4302_Mixed,_incl._Solute-binding_protein_family_5,_conserved_site,_and_Oligopeptide/dipeptide_transporter,_C-terminal_region

description:
  Mixed, incl. Solute-binding protein family 5, conserved site, and Oligopeptide/dipeptide transporter, C-terminal region


id: CL:4303
description: Solute-binding protein family 5, and Oligopeptide transport permease C-like, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4303_Solute-binding_protein_family_5,_and_Oligopeptide_transport_permease_C-like,_N-terminal_domain


id: CL:431
description: Mixed, incl. Sulfur amino acid metabolic process, and Putative C-S lyase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:431_Mixed,_incl._Sulfur_amino_acid_metabolic_process,_and_Putative_C-S_lyase


id: CL:4312
description: Oligopeptide/dipeptide transporter, C-terminal region, and Peptidase M28
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4312_Oligopeptide/dipeptide_transporter,_C-terminal_region,_and_Peptidase_M28


id: CL:432
description: Sulfur amino acid biosynthetic process, and One-carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:432_Sulfur_amino_acid_biosynthetic_process,_and_One-carbon_metabolism


id: CL:4321
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4321_Oligopeptide/dipeptide_ABC_transporter,_C-terminal,_and_Nickel_cation_transmembrane_transporter_activity

description:
  Oligopeptide/dipeptide ABC transporter, C-terminal, and Nickel cation transmembrane transporter activity


id: CL:4330
description: Nickel cation transmembrane transporter activity, and Solute-binding protein family 5
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4330_Nickel_cation_transmembrane_transporter_activity,_and_Solute-binding_protein_family_5


id: CL:4339
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4339_Mixed,_incl._Solute-binding_protein_family_5,_conserved_site,_and_Oligopeptide_transport_permease_C-like,_N-terminal_domain

description:
  Mixed, incl. Solute-binding protein family 5, conserved site, and Oligopeptide transport permease C-like, N-terminal domain


id: CL:434
description: Methionine synthase activity, and One-carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:434_Methionine_synthase_activity,_and_One-carbon_metabolism


id: CL:4349
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4349_Oligopeptide/dipeptide_ABC_transporter,_C-terminal,_and_Nickel_cation_transmembrane_transporter_activity

description:
  Oligopeptide/dipeptide ABC transporter, C-terminal, and Nickel cation transmembrane transporter activity


id: CL:4360
description: Mixed, incl. ABC transporter, CbiO/EcfA subunit, and ECF transporter, substrate-specific component
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4360_Mixed,_incl._ABC_transporter,_CbiO/EcfA_subunit,_and_ECF_transporter,_substrate-specific_component


id: CL:4365
description: ABC transporter, CbiO/EcfA subunit, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4365_ABC_transporter,_CbiO/EcfA_subunit,_and_Cobalt_transport_protein


id: CL:4379
description: Domain of unknown function DUF4430, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4379_Domain_of_unknown_function_DUF4430,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:4389
description: Mixed, incl. ABC-2 transporter, and ABC transporter-like, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4389_Mixed,_incl._ABC-2_transporter,_and_ABC_transporter-like,_ATP-binding_domain


id: CL:4390
description: Mixed, incl. ABC-2 family transporter protein, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4390_Mixed,_incl._ABC-2_family_transporter_protein,_and_ABC-2_family_transporter_protein


id: CL:4391
description: Mixed, incl. ABC-2 transporter, and Cation efflux family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4391_Mixed,_incl._ABC-2_transporter,_and_Cation_efflux_family


id: CL:4394
description: Mixed, incl. ABC-2 type transporter, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4394_Mixed,_incl._ABC-2_type_transporter,_and_Histidine_kinase


id: CL:4409
description: Mixed, incl. ABC-2 type transporter, and Domain of unknown function DUF4162
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4409_Mixed,_incl._ABC-2_type_transporter,_and_Domain_of_unknown_function_DUF4162


id: CL:4422
description: Mixed, incl. ABC-2 family transporter protein, and CENP-B N-terminal DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4422_Mixed,_incl._ABC-2_family_transporter_protein,_and_CENP-B_N-terminal_DNA-binding_domain


id: CL:4425
description: ABC-2 family transporter protein, and Histidine kinase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4425_ABC-2_family_transporter_protein,_and_Histidine_kinase_domain


id: CL:4438
description: Mixed, incl. Riboflavin metabolic process, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4438_Mixed,_incl._Riboflavin_metabolic_process,_and_ABC-2_family_transporter_protein


id: CL:4448
description: Mixed, incl. ABC-2 type transporter, and Iron-sulfur cluster-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4448_Mixed,_incl._ABC-2_type_transporter,_and_Iron-sulfur_cluster-binding_domain


id: CL:4461
description: Mixed, incl. Type 1 protein exporter, and Phosphopantetheine
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4461_Mixed,_incl._Type_1_protein_exporter,_and_Phosphopantetheine


id: CL:4463
description: Mixed, incl. Phosphopantetheine, and Beta-lactamase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4463_Mixed,_incl._Phosphopantetheine,_and_Beta-lactamase


id: CL:4491
description: ABC transporters, and HlyD family secretion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4491_ABC_transporters,_and_HlyD_family_secretion_protein


id: CL:4492
description: ABC transporters, and HlyD family secretion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4492_ABC_transporters,_and_HlyD_family_secretion_protein


id: CL:4493
description: Mixed, incl. MacB, ATP-binding domain, and FtsX-like permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4493_Mixed,_incl._MacB,_ATP-binding_domain,_and_FtsX-like_permease_family


id: CL:4494
description: Mixed, incl. MacB, ATP-binding domain, and FtsX-like permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4494_Mixed,_incl._MacB,_ATP-binding_domain,_and_FtsX-like_permease_family


id: CL:4495
description: Mixed, incl. HlyD family secretion protein, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4495_Mixed,_incl._HlyD_family_secretion_protein,_and_MacB,_ATP-binding_domain


id: CL:4496
description: Mixed, incl. MacB, ATP-binding domain, and FtsX-like permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4496_Mixed,_incl._MacB,_ATP-binding_domain,_and_FtsX-like_permease_family


id: CL:4498
description: Mixed, incl. HlyD family secretion protein, and MacB-like periplasmic core domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4498_Mixed,_incl._HlyD_family_secretion_protein,_and_MacB-like_periplasmic_core_domain


id: CL:4500
description: Outer membrane efflux protein, and MacB-like periplasmic core domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4500_Outer_membrane_efflux_protein,_and_MacB-like_periplasmic_core_domain


id: CL:453
description: Aminotransferase class I and II, and Macro domain-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:453_Aminotransferase_class_I_and_II,_and_Macro_domain-like


id: CL:4533
description: Acriflavin resistance protein, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4533_Acriflavin_resistance_protein,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:4543
description: Mixed, incl. MacB, ATP-binding domain, and FtsX-like permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4543_Mixed,_incl._MacB,_ATP-binding_domain,_and_FtsX-like_permease_family


id: CL:4561
description: Bacterial extracellular solute-binding protein, and ABC-type carbohydrate transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4561_Bacterial_extracellular_solute-binding_protein,_and_ABC-type_carbohydrate_transporter_activity


id: CL:4578
description: Ligand-gated channel activity, and Amino acid ABC transporter, permease protein, 3-TM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4578_Ligand-gated_channel_activity,_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain


id: CL:4595
description: Mixed, incl. Polyamine transport, and Transcription regulator HTH, LysR
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4595_Mixed,_incl._Polyamine_transport,_and_Transcription_regulator_HTH,_LysR


id: CL:4596
description: Polyamine transport, and Transcription regulator HTH, LysR
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4596_Polyamine_transport,_and_Transcription_regulator_HTH,_LysR


id: CL:4598
description: Polyamine transport, and ABC-type polyamine transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4598_Polyamine_transport,_and_ABC-type_polyamine_transporter_activity


id: CL:4624
description: NMT1/THI5 like, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4624_NMT1/THI5_like,_and_Sulfur_metabolism


id: CL:4640
description: Mixed, incl. Amino acid transport, and Branched-chain amino acid ATP-binding cassette transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4640_Mixed,_incl._Amino_acid_transport,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter


id: CL:4641
description: Mixed, incl. Branched-chain amino acid transport, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4641_Mixed,_incl._Branched-chain_amino_acid_transport,_and_Leucine-binding_protein_domain


id: CL:4643
description: Branched-chain amino acid transport, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4643_Branched-chain_amino_acid_transport,_and_Leucine-binding_protein_domain


id: CL:4644
description: Branched-chain amino acid transport, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4644_Branched-chain_amino_acid_transport,_and_Leucine-binding_protein_domain


id: CL:4653
description: Branched-chain amino acid transport, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4653_Branched-chain_amino_acid_transport,_and_Leucine-binding_protein_domain


id: CL:466
description: Threonine metabolic process, and Leucine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:466_Threonine_metabolic_process,_and_Leucine_metabolic_process


id: CL:467
description: Threonine biosynthetic process, and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:467_Threonine_biosynthetic_process,_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:4677
description: Mixed, incl. Bacterial extracellular solute-binding protein, and ABC transporters
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4677_Mixed,_incl._Bacterial_extracellular_solute-binding_protein,_and_ABC_transporters


id: CL:469
description: Threonine biosynthesis, and Aminotransferase class IV
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:469_Threonine_biosynthesis,_and_Aminotransferase_class_IV


id: CL:4697
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4697_Mixed,_incl._Biosynthesis_of_siderophore_group_nonribosomal_peptides,_and_Acetyltransferase_(GNAT)_domain

description:
  Mixed, incl. Biosynthesis of siderophore group nonribosomal peptides, and Acetyltransferase (GNAT) domain


id: CL:4699
description: ABC transporter transmembrane region, and Queuosine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4699_ABC_transporter_transmembrane_region,_and_Queuosine_metabolic_process


id: CL:4716
description: Mixed, incl. Nickel cation binding, and Transcriptional regulator PadR-like family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4716_Mixed,_incl._Nickel_cation_binding,_and_Transcriptional_regulator_PadR-like_family


id: CL:4718
description: Nickel cation binding, and ECF-type riboflavin transporter, S component
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4718_Nickel_cation_binding,_and_ECF-type_riboflavin_transporter,_S_component


id: CL:4735
description: Mixed, incl. Tetrapyrrole metabolic process, and ABC transporter periplasmic binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4735_Mixed,_incl._Tetrapyrrole_metabolic_process,_and_ABC_transporter_periplasmic_binding_domain


id: CL:4736
description: Tetrapyrrole metabolic process, and ABC transporter periplasmic binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4736_Tetrapyrrole_metabolic_process,_and_ABC_transporter_periplasmic_binding_domain


id: CL:4744
description: Tetrapyrrole methylase, subdomain 2, and Cobalamin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4744_Tetrapyrrole_methylase,_subdomain_2,_and_Cobalamin_metabolic_process


id: CL:4766
description: Cobalamin biosynthesis, and Guanylyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4766_Cobalamin_biosynthesis,_and_Guanylyltransferase_activity


id: CL:4785
description: CobN/Magnesium Chelatase, and Photosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4785_CobN/Magnesium_Chelatase,_and_Photosynthesis


id: CL:4800
description: ABC transporter periplasmic binding domain, and ABC transporter, permease protein, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4800_ABC_transporter_periplasmic_binding_domain,_and_ABC_transporter,_permease_protein,_BtuC-like


id: CL:4801
description: Heme transport, and ABC 3 transport family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4801_Heme_transport,_and_ABC_3_transport_family


id: CL:4812
description: ABC transporter periplasmic binding domain, and FecCD transport family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4812_ABC_transporter_periplasmic_binding_domain,_and_FecCD_transport_family


id: CL:4821
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4821_Mostly_uncharacterized,_incl._Von_Willebrand_factor_A-like_domain_superfamily,_and_Putative_peptidoglycan_binding_domain

description:
  Mostly uncharacterized, incl. Von Willebrand factor A-like domain superfamily, and Putative peptidoglycan binding domain


id: CL:4823
description: Mixed, incl. Von Willebrand factor A-like domain superfamily, and ATPase, AAA-3
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4823_Mixed,_incl._Von_Willebrand_factor_A-like_domain_superfamily,_and_ATPase,_AAA-3


id: CL:4826
description: Mixed, incl. Von Willebrand factor A-like domain superfamily, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4826_Mixed,_incl._Von_Willebrand_factor_A-like_domain_superfamily,_and_ABC-2_family_transporter_protein


id: CL:4844
description: Mixed, incl. Putative peptidoglycan binding domain, and ATPase, AAA-3
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4844_Mixed,_incl._Putative_peptidoglycan_binding_domain,_and_ATPase,_AAA-3


id: CL:4862
description: Mixed, incl. Probable zinc-ribbon domain, and Putative peptidoglycan binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4862_Mixed,_incl._Probable_zinc-ribbon_domain,_and_Putative_peptidoglycan_binding_domain


id: CL:4872
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4872_Mostly_uncharacterized,_incl._Ferric-uptake_regulator,_and_Inorganic_anion_transmembrane_transporter_activity

description:
  Mostly uncharacterized, incl. Ferric-uptake regulator, and Inorganic anion transmembrane transporter activity


id: CL:4873
description: Mixed, incl. ABC transporter, TroCD-like, and Zinc-uptake complex component A periplasmic
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4873_Mixed,_incl._ABC_transporter,_TroCD-like,_and_Zinc-uptake_complex_component_A_periplasmic


id: CL:4875
description: Mixed, incl. ABC transporter, TroCD-like, and Zinc-uptake complex component A periplasmic
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4875_Mixed,_incl._ABC_transporter,_TroCD-like,_and_Zinc-uptake_complex_component_A_periplasmic


id: CL:4879
description: ABC transporter, TroCD-like, and Zinc-uptake complex component A periplasmic
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4879_ABC_transporter,_TroCD-like,_and_Zinc-uptake_complex_component_A_periplasmic


id: CL:488
description: Leucine metabolic process, and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:488_Leucine_metabolic_process,_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:4908
description: Mixed, incl. Chromate transport, and CoA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4908_Mixed,_incl._Chromate_transport,_and_CoA-binding


id: CL:4910
description: Mixed, incl. Na+/Pi-cotransporter, and Integral membrane protein (intg_mem_TP0381)
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4910_Mixed,_incl._Na+/Pi-cotransporter,_and_Integral_membrane_protein_(intg_mem_TP0381)


id: CL:4933
description: Mostly uncharacterized, incl. Homeostatic process, and Xenobiotic transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4933_Mostly_uncharacterized,_incl._Homeostatic_process,_and_Xenobiotic_transport


id: CL:4934
description: Mixed, incl. Flavoprotein-like superfamily, and Peptidase M42, domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4934_Mixed,_incl._Flavoprotein-like_superfamily,_and_Peptidase_M42,_domain_2


id: CL:4935
description: Mixed, incl. Peptidase M42, domain 2, and MarR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4935_Mixed,_incl._Peptidase_M42,_domain_2,_and_MarR-type_HTH_domain


id: CL:4936
description: Mixed, incl. Flavoprotein-like superfamily, and MarR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4936_Mixed,_incl._Flavoprotein-like_superfamily,_and_MarR-type_HTH_domain


id: CL:4937
description: Mixed, incl. Flavoprotein-like superfamily, and MarR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4937_Mixed,_incl._Flavoprotein-like_superfamily,_and_MarR-type_HTH_domain


id: CL:4939
description: MarR-type HTH domain, and Tryptophan metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4939_MarR-type_HTH_domain,_and_Tryptophan_metabolic_process


id: CL:4955
description: Mixed, incl. Methyltransferase domain, and Transmembrane protein TMEM64
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4955_Mixed,_incl._Methyltransferase_domain,_and_Transmembrane_protein_TMEM64


id: CL:4967
description: Mixed, incl. Flavin reductase like domain, and DNA binding HTH domain, AraC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4967_Mixed,_incl._Flavin_reductase_like_domain,_and_DNA_binding_HTH_domain,_AraC-type


id: CL:4979
description: Peptidase M42, domain 2, and Multidrug and toxic compound extrusion MepA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4979_Peptidase_M42,_domain_2,_and_Multidrug_and_toxic_compound_extrusion_MepA-like


id: CL:4994
description: Mixed, incl. Cellular metal ion homeostasis, and Response to oxidative stress
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4994_Mixed,_incl._Cellular_metal_ion_homeostasis,_and_Response_to_oxidative_stress


id: CL:4995
description: Mixed, incl. Rubredoxin-oxygen oxidoreductase, and Response to oxidative stress
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4995_Mixed,_incl._Rubredoxin-oxygen_oxidoreductase,_and_Response_to_oxidative_stress


id: CL:4998
description: Rubredoxin-like domain, and Nitrotoluene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:4998_Rubredoxin-like_domain,_and_Nitrotoluene_degradation


id: CL:5020
description: Mixed, incl. Cellular metal ion homeostasis, and Aldo/keto reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5020_Mixed,_incl._Cellular_metal_ion_homeostasis,_and_Aldo/keto_reductase_family


id: CL:5022
description: Cellular metal ion homeostasis, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5022_Cellular_metal_ion_homeostasis,_and_4Fe-4S_dicluster_domain


id: CL:5043
description: Mixed, incl. Xenobiotic transport, and Iron transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5043_Mixed,_incl._Xenobiotic_transport,_and_Iron_transport


id: CL:5045
description: Mixed, incl. Xenobiotic transport, and Ubiquinone and other terpenoid-quinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5045_Mixed,_incl._Xenobiotic_transport,_and_Ubiquinone_and_other_terpenoid-quinone_biosynthesis


id: CL:5047
description: MatE, and Quinoprotein alcohol dehydrogenase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5047_MatE,_and_Quinoprotein_alcohol_dehydrogenase-like_superfamily


id: CL:5064
description: Mixed, incl. Menaquinone metabolic process, and NUDIX hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5064_Mixed,_incl._Menaquinone_metabolic_process,_and_NUDIX_hydrolase


id: CL:5077
description: Mixed, incl. Iron transport, and Ferrous iron transporter FeoA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5077_Mixed,_incl._Iron_transport,_and_Ferrous_iron_transporter_FeoA_domain


id: CL:5079
description: Iron transport, and Ferrous iron transporter FeoA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5079_Iron_transport,_and_Ferrous_iron_transporter_FeoA_domain


id: CL:5093
description: Mixed, incl. dephospho-CoA kinase activity, and Iron transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5093_Mixed,_incl._dephospho-CoA_kinase_activity,_and_Iron_transport


id: CL:5102
description: Mixed, incl. Amidohydrolase 3, and NUDIX hydrolase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5102_Mixed,_incl._Amidohydrolase_3,_and_NUDIX_hydrolase,_conserved_site


id: CL:5103
description: Mixed, incl. Amidohydrolase 3, and NUDIX hydrolase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5103_Mixed,_incl._Amidohydrolase_3,_and_NUDIX_hydrolase,_conserved_site


id: CL:5104
description: Mixed, incl. Amidohydrolase 3, and DUF34/NIF3 superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5104_Mixed,_incl._Amidohydrolase_3,_and_DUF34/NIF3_superfamily


id: CL:5105
description: Mixed, incl. DUF34/NIF3 superfamily, and Monooxygenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5105_Mixed,_incl._DUF34/NIF3_superfamily,_and_Monooxygenase_activity


id: CL:5114
description: Amidohydrolase 3, and Amino acid permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5114_Amidohydrolase_3,_and_Amino_acid_permease


id: CL:5123
description: Mixed, incl. NUDIX hydrolase, conserved site, and Lactone catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5123_Mixed,_incl._NUDIX_hydrolase,_conserved_site,_and_Lactone_catabolic_process


id: CL:5136
description: Mixed, incl. Cyclic phosphodiesterase, and Sulfite exporter TauE/SafE
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5136_Mixed,_incl._Cyclic_phosphodiesterase,_and_Sulfite_exporter_TauE/SafE


id: CL:5145
description: Mixed, incl. Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, and Peptidase M24
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5145_Mixed,_incl._Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond,_and_Peptidase_M24


id: CL:5146
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5146_Mixed,_incl._Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond,_and_Creatinase,_N-terminal

description:
  Mixed, incl. Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, and Creatinase, N-terminal


id: CL:5148
description: Mixed, incl. Glycine reductase activity, and Fatty acid synthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5148_Mixed,_incl._Glycine_reductase_activity,_and_Fatty_acid_synthesis_protein


id: CL:5151
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5151_Glycine_reductase_complex_selenoprotein_A,_and_Selenoprotein_B,_glycine/betaine/sarcosine/D-proline_reductase_family

description:
  Glycine reductase complex selenoprotein A, and Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family


id: CL:5164
description: Glycine reductase activity, and DNA-binding HTH domain, TetR-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5164_Glycine_reductase_activity,_and_DNA-binding_HTH_domain,_TetR-type


id: CL:5178
description: Mixed, incl. Glycine/sarcosine/betaine reductase component B subunits, and Proline racemase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5178_Mixed,_incl._Glycine/sarcosine/betaine_reductase_component_B_subunits,_and_Proline_racemase


id: CL:5198
description: Mixed, incl. Armadillo-type fold, and Aldo-keto reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5198_Mixed,_incl._Armadillo-type_fold,_and_Aldo-keto_reductase


id: CL:5218
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5218_Mixed,_incl._Secondary_active_transmembrane_transporter_activity,_and_Transcription_regulator_HTH,_GntR

description:
  Mixed, incl. Secondary active transmembrane transporter activity, and Transcription regulator HTH, GntR


id: CL:5219
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5219_Mixed,_incl._Secondary_active_transmembrane_transporter_activity,_and_Transcription_regulator_HTH,_GntR

description:
  Mixed, incl. Secondary active transmembrane transporter activity, and Transcription regulator HTH, GntR


id: CL:5220
description: Mixed, incl. Secondary active transmembrane transporter activity, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5220_Mixed,_incl._Secondary_active_transmembrane_transporter_activity,_and_ABC_transporter,_permease


id: CL:5221
description: Mixed, incl. Secondary active transmembrane transporter activity, and LamB/YcsF family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5221_Mixed,_incl._Secondary_active_transmembrane_transporter_activity,_and_LamB/YcsF_family


id: CL:5222
description: Mixed, incl. Symporter activity, and LamB/YcsF family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5222_Mixed,_incl._Symporter_activity,_and_LamB/YcsF_family


id: CL:5223
description: Mixed, incl. LamB/YcsF family, and Transcription regulator IclR, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5223_Mixed,_incl._LamB/YcsF_family,_and_Transcription_regulator_IclR,_C-terminal


id: CL:5226
description: LamB/YcsF family, and Cyclophilin-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5226_LamB/YcsF_family,_and_Cyclophilin-like_domain_superfamily


id: CL:5239
description: Mixed, incl. Alanine transport, and Crp-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5239_Mixed,_incl._Alanine_transport,_and_Crp-type_HTH_domain


id: CL:5249
description: Sodium:dicarboxylate symporter, and Sodium:neurotransmitter symporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5249_Sodium:dicarboxylate_symporter,_and_Sodium:neurotransmitter_symporter


id: CL:525
description: Mixed, incl. Alanine metabolic process, and Siderophore metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:525_Mixed,_incl._Alanine_metabolic_process,_and_Siderophore_metabolic_process


id: CL:5267
description: Na+/H+ antiporter family, and Peptidase family S41
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5267_Na+/H+_antiporter_family,_and_Peptidase_family_S41


id: CL:5284
description: Mixed, incl. ABC transporter, permease, and ABC transporter substrate-binding protein PnrA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5284_Mixed,_incl._ABC_transporter,_permease,_and_ABC_transporter_substrate-binding_protein_PnrA-like


id: CL:5286
description: ABC transporter substrate-binding protein PnrA-like, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5286_ABC_transporter_substrate-binding_protein_PnrA-like,_and_ABC_transporter,_permease


id: CL:5304
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5304_Mixed,_incl._ABC-type_carbohydrate_transporter_activity,_and_Monocarboxylic_acid_transmembrane_transporter_activity

description:
  Mixed, incl. ABC-type carbohydrate transporter activity, and Monocarboxylic acid transmembrane transporter activity


id: CL:5315
description: Mixed, incl. GntR, C-terminal, and Viral process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5315_Mixed,_incl._GntR,_C-terminal,_and_Viral_process


id: CL:5316
description: Mixed, incl. GntR, C-terminal, and Viral process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5316_Mixed,_incl._GntR,_C-terminal,_and_Viral_process


id: CL:5317
description: GntR, C-terminal, and Transcription regulator HTH, AraC- type
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5317_GntR,_C-terminal,_and_Transcription_regulator_HTH,_AraC-_type


id: CL:5337
description: Viral process, and DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5337_Viral_process,_and_DDE_transposase_sub-family


id: CL:5349
description: Mixed, incl. TRAP C4-dicarboxylate transport system permease DctM subunit, and Receptor
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5349_Mixed,_incl._TRAP_C4-dicarboxylate_transport_system_permease_DctM_subunit,_and_Receptor


id: CL:5351
description: Mixed, incl. TRAP C4-dicarboxylate transport system permease DctM subunit, and Receptor
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5351_Mixed,_incl._TRAP_C4-dicarboxylate_transport_system_permease_DctM_subunit,_and_Receptor


id: CL:5370
description: Mixed, incl. Formate metabolic process, and Response to cold
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5370_Mixed,_incl._Formate_metabolic_process,_and_Response_to_cold


id: CL:5389
description: Mixed, incl. RNA ligase activity, and Uncharacterised protein family UPF0180
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5389_Mixed,_incl._RNA_ligase_activity,_and_Uncharacterised_protein_family_UPF0180


id: CL:5399
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5399_Mostly_uncharacterized,_incl._Regulation_of_nitrogen_utilization,_and_Protein_of_unknown_function_(DUF1538)

description:
  Mostly uncharacterized, incl. Regulation of nitrogen utilization, and Protein of unknown function (DUF1538)


id: CL:5401
description: Mixed, incl. Regulation of nitrogen utilization, and Protein of unknown function (DUF1538)
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5401_Mixed,_incl._Regulation_of_nitrogen_utilization,_and_Protein_of_unknown_function_(DUF1538)


id: CL:5402
description: Mixed, incl. Regulation of nitrogen utilization, and Protein of unknown function (DUF1538)
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5402_Mixed,_incl._Regulation_of_nitrogen_utilization,_and_Protein_of_unknown_function_(DUF1538)


id: CL:5404
description: Mixed, incl. Nitrogen regulatory PII-like, alpha/beta, and FlgN protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5404_Mixed,_incl._Nitrogen_regulatory_PII-like,_alpha/beta,_and_FlgN_protein


id: CL:5406
description: Nitrogen regulatory protein PII, and Protein of unknown function (DUF1538)
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5406_Nitrogen_regulatory_protein_PII,_and_Protein_of_unknown_function_(DUF1538)


id: CL:5438
description: Mixed, incl. Peptidase S58, DmpA, and Mechanosensitive ion channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5438_Mixed,_incl._Peptidase_S58,_DmpA,_and_Mechanosensitive_ion_channel_activity


id: CL:545
description: Arginine metabolic process, and Major facilitator superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:545_Arginine_metabolic_process,_and_Major_facilitator_superfamily


id: CL:5454
description: Mixed, incl. SHOCT domain, and Methyltransferase small domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5454_Mixed,_incl._SHOCT_domain,_and_Methyltransferase_small_domain


id: CL:5472
description: Mixed, incl. DNA metabolic process, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5472_Mixed,_incl._DNA_metabolic_process,_and_Response_to_virus


id: CL:5473
description: Mixed, incl. DNA metabolic process, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5473_Mixed,_incl._DNA_metabolic_process,_and_Response_to_virus


id: CL:5474
description: Mixed, incl. Response to virus, and Transposition, DNA-mediated
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5474_Mixed,_incl._Response_to_virus,_and_Transposition,_DNA-mediated


id: CL:5475
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5475_Mostly_uncharacterized,_incl._Transcriptional_regulator_TetR,_C-terminal,_Firmicutes_type,_and_Helix-turn-helix_XRE-family_like_proteins

description:
  Mostly uncharacterized, incl. Transcriptional regulator TetR, C-terminal, Firmicutes type, and Helix-turn-helix XRE-family like proteins


id: CL:5476
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5476_Mixed,_incl._Transcriptional_regulator_TetR,_C-terminal,_Firmicutes_type,_and_Flavin_adenine_dinucleotide_binding

description:
  Mixed, incl. Transcriptional regulator TetR, C-terminal, Firmicutes type, and Flavin adenine dinucleotide binding


id: CL:5477
description: Mixed, incl. Transcriptional regulator TetR, C-terminal, Firmicutes type, and MMPL family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5477_Mixed,_incl._Transcriptional_regulator_TetR,_C-terminal,_Firmicutes_type,_and_MMPL_family


id: CL:5479
description: Mixed, incl. Transcriptional regulator TetR, C-terminal, Firmicutes type, and MMPL family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5479_Mixed,_incl._Transcriptional_regulator_TetR,_C-terminal,_Firmicutes_type,_and_MMPL_family


id: CL:5482
description: Mixed, incl. Hsp33 protein, and RutC-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5482_Mixed,_incl._Hsp33_protein,_and_RutC-like_superfamily


id: CL:5495
description: Transcriptional regulator TetR, C-terminal, Firmicutes type, and MMPL family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5495_Transcriptional_regulator_TetR,_C-terminal,_Firmicutes_type,_and_MMPL_family


id: CL:5514
description: Mixed, incl. C4-dicarboxylate transport, and Transmembrane protein TMEM64
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5514_Mixed,_incl._C4-dicarboxylate_transport,_and_Transmembrane_protein_TMEM64


id: CL:5523
description: Mostly uncharacterized, incl. TniQ, and TnsA endonuclease C terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5523_Mostly_uncharacterized,_incl._TniQ,_and_TnsA_endonuclease_C_terminal


id: CL:5525
description: Mixed, incl. TniQ, and TnsA endonuclease C terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5525_Mixed,_incl._TniQ,_and_TnsA_endonuclease_C_terminal


id: CL:5530
description: Mixed, incl. TniQ, and TnsA endonuclease C terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5530_Mixed,_incl._TniQ,_and_TnsA_endonuclease_C_terminal


id: CL:5557
description: Mixed, incl. IrrE N-terminal-like domain, and Endodeoxyribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5557_Mixed,_incl._IrrE_N-terminal-like_domain,_and_Endodeoxyribonuclease_activity


id: CL:5568
description: Mixed, incl. Response to virus, and RNA-directed DNA polymerase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5568_Mixed,_incl._Response_to_virus,_and_RNA-directed_DNA_polymerase_activity


id: CL:5569
description: Response to virus, and Restriction endonuclease type II-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5569_Response_to_virus,_and_Restriction_endonuclease_type_II-like


id: CL:5570
description: Response to virus, and RNA-directed DNA polymerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5570_Response_to_virus,_and_RNA-directed_DNA_polymerase


id: CL:559
description: Mixed, incl. Major facilitator superfamily, and NAD-dependent epimerase/dehydratase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:559_Mixed,_incl._Major_facilitator_superfamily,_and_NAD-dependent_epimerase/dehydratase


id: CL:5593
description: RAMP superfamily, and CRISPR-associated protein (Cas_Cas02710)
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5593_RAMP_superfamily,_and_CRISPR-associated_protein_(Cas_Cas02710)


id: CL:5605
description: DDE transposase sub-family, and RNA-directed DNA polymerase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5605_DDE_transposase_sub-family,_and_RNA-directed_DNA_polymerase_activity


id: CL:5619
description: Mixed, incl. DNA modification, and DNA recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5619_Mixed,_incl._DNA_modification,_and_DNA_recombination


id: CL:5620
description: Mixed, incl. DNA modification, and DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5620_Mixed,_incl._DNA_modification,_and_DDE_transposase_sub-family


id: CL:5621
description: Mixed, incl. DNA modification, and ATPase, AAA-type, core
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5621_Mixed,_incl._DNA_modification,_and_ATPase,_AAA-type,_core


id: CL:5623
description: Mixed, incl. DNA modification, and PglZ domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5623_Mixed,_incl._DNA_modification,_and_PglZ_domain


id: CL:5624
description: Mostly uncharacterized, incl. PglZ domain, and Schlafen, AlbA_2 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5624_Mostly_uncharacterized,_incl._PglZ_domain,_and_Schlafen,_AlbA_2_domain


id: CL:5627
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5627_Mixed,_incl._Rescue_of_stalled_ribosome,_and_Site-specific_DNA-methyltransferase_(adenine-specific)_activity

description:
  Mixed, incl. Rescue of stalled ribosome, and Site-specific DNA-methyltransferase (adenine-specific) activity


id: CL:5649
description: DNA methylase, adenine-specific, and Endodeoxyribonuclease complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5649_DNA_methylase,_adenine-specific,_and_Endodeoxyribonuclease_complex


id: CL:5671
description: Mixed, incl. Nucleoplasm, and Macro domain-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5671_Mixed,_incl._Nucleoplasm,_and_Macro_domain-like


id: CL:5684
description: Mixed, incl. Transposase DDE domain, and DNA strand exchange activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5684_Mixed,_incl._Transposase_DDE_domain,_and_DNA_strand_exchange_activity


id: CL:5685
description: Mixed, incl. DNA strand exchange activity, and Transposase DDE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5685_Mixed,_incl._DNA_strand_exchange_activity,_and_Transposase_DDE_domain


id: CL:5696
description: Transposase DDE domain, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5696_Transposase_DDE_domain,_and_Transposase_activity


id: CL:570
description: Mixed, incl. Cell pole, and Dioxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:570_Mixed,_incl._Cell_pole,_and_Dioxygenase


id: CL:5705
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5705_Mixed,_incl._Core-binding_(CB)_domain,_and_DNA_replication_protein_DnaC/insertion_sequence_putative_ATP-binding_protein

description:
  Mixed, incl. Core-binding (CB) domain, and DNA replication protein DnaC/insertion sequence putative ATP-binding protein


id: CL:5707
description: Core-binding (CB) domain, and Peptidase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5707_Core-binding_(CB)_domain,_and_Peptidase_complex


id: CL:5724
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5724_DNA_replication_protein_DnaC/insertion_sequence_putative_ATP-binding_protein,_and_HTH_domain,_IS21_transposase-type

description:
  DNA replication protein DnaC/insertion sequence putative ATP-binding protein, and HTH domain, IS21 transposase-type


id: CL:5738
description: Mostly uncharacterized, incl. Glycerolipid metabolism, and Methionine transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5738_Mostly_uncharacterized,_incl._Glycerolipid_metabolism,_and_Methionine_transport


id: CL:5740
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5740_Mostly_uncharacterized,_incl._Methionine_transport,_and_Pyridine-containing_compound_catabolic_process

description:
  Mostly uncharacterized, incl. Methionine transport, and Pyridine-containing compound catabolic process


id: CL:5742
description: Mixed, incl. Methionine transport, and DEAD/DEAH box helicase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5742_Mixed,_incl._Methionine_transport,_and_DEAD/DEAH_box_helicase_domain


id: CL:5764
description: Mixed, incl. glycerol-3-phosphate metabolic process, and Nuclear lumen
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5764_Mixed,_incl._glycerol-3-phosphate_metabolic_process,_and_Nuclear_lumen


id: CL:5773
description: Mixed, incl. DNA dealkylation, and Damage-control phosphatase ARMT1-like, metal-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5773_Mixed,_incl._DNA_dealkylation,_and_Damage-control_phosphatase_ARMT1-like,_metal-binding_domain


id: CL:5775
description: Mixed, incl. DNA dealkylation, and HhH-GPD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5775_Mixed,_incl._DNA_dealkylation,_and_HhH-GPD_domain


id: CL:5787
description: Mixed, incl. Damage-control phosphatase ARMT1-like, metal-binding domain, and B3/4 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5787_Mixed,_incl._Damage-control_phosphatase_ARMT1-like,_metal-binding_domain,_and_B3/4_domain


id: CL:5799
description: Mixed, incl. Carbon-carbon lyase activity, and Citrate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5799_Mixed,_incl._Carbon-carbon_lyase_activity,_and_Citrate_transport


id: CL:5800
description: Mixed, incl. Oxo-acid-lyase activity, and Sodium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5800_Mixed,_incl._Oxo-acid-lyase_activity,_and_Sodium_ion_transport


id: CL:5802
description: Mixed, incl. Oxo-acid-lyase activity, and Acyl carrier activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5802_Mixed,_incl._Oxo-acid-lyase_activity,_and_Acyl_carrier_activity


id: CL:581
description: Mixed, incl. Glycerophospholipid metabolism, and Alpha/Beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:581_Mixed,_incl._Glycerophospholipid_metabolism,_and_Alpha/Beta_hydrolase_fold


id: CL:582
description: Mixed, incl. Glycerophospholipid metabolism, and Nitroreductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:582_Mixed,_incl._Glycerophospholipid_metabolism,_and_Nitroreductase-like


id: CL:5821
description: Mixed, incl. Citrate transport, and Phosphoglycerate mutase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5821_Mixed,_incl._Citrate_transport,_and_Phosphoglycerate_mutase_activity


id: CL:5822
description: Mixed, incl. Phosphoglycerate mutase activity, and Domain of unknown function DUF1232
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5822_Mixed,_incl._Phosphoglycerate_mutase_activity,_and_Domain_of_unknown_function_DUF1232


id: CL:583
description: Glycerophospholipid metabolism, and Alpha/Beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:583_Glycerophospholipid_metabolism,_and_Alpha/Beta_hydrolase_fold


id: CL:5831
description: Mixed, incl. Citrate transport, and Lipid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5831_Mixed,_incl._Citrate_transport,_and_Lipid_catabolic_process


id: CL:584
description: Mixed, incl. CDP-alcohol phosphatidyltransferase, and Peroxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:584_Mixed,_incl._CDP-alcohol_phosphatidyltransferase,_and_Peroxidase


id: CL:5841
description: Mixed, incl. Peptidase M19, and Cysteine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5841_Mixed,_incl._Peptidase_M19,_and_Cysteine_catabolic_process


id: CL:5842
description: Mixed, incl. PucR C-terminal helix-turn-helix domain, and Ribbon-helix-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5842_Mixed,_incl._PucR_C-terminal_helix-turn-helix_domain,_and_Ribbon-helix-helix


id: CL:5844
description: Mixed, incl. Ribbon-helix-helix, and Band 7 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5844_Mixed,_incl._Ribbon-helix-helix,_and_Band_7_domain


id: CL:586
description: CDP-alcohol phosphatidyltransferase, and Glycerolipid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:586_CDP-alcohol_phosphatidyltransferase,_and_Glycerolipid_biosynthetic_process


id: CL:5866
description: Peptidase M19, and Protein of unknown function DUF819
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5866_Peptidase_M19,_and_Protein_of_unknown_function_DUF819


id: CL:5882
description: Mixed, incl. Integrase, catalytic core, and EamA-like transporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5882_Mixed,_incl._Integrase,_catalytic_core,_and_EamA-like_transporter_family


id: CL:5883
description: Mixed, incl. EamA-like transporter family, and Anaerobic glutamate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5883_Mixed,_incl._EamA-like_transporter_family,_and_Anaerobic_glutamate_catabolic_process


id: CL:5884
description: Mixed, incl. EamA-like transporter family, and Large serine recombinase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5884_Mixed,_incl._EamA-like_transporter_family,_and_Large_serine_recombinase_sub-family


id: CL:5887
description: EamA-like transporter family, and DNA strand exchange activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5887_EamA-like_transporter_family,_and_DNA_strand_exchange_activity


id: CL:5905
description: Flavodoxin domain, and NADPH-dependent FMN reductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5905_Flavodoxin_domain,_and_NADPH-dependent_FMN_reductase-like


id: CL:5920
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5920_Mixed,_incl._Anaerobic_glutamate_catabolic_process,_and_CoA_enzyme_activase_uncharacterised_domain_(DUF2229)

description:
  Mixed, incl. Anaerobic glutamate catabolic process, and CoA enzyme activase uncharacterised domain (DUF2229)


id: CL:5923
description: CoA enzyme activase uncharacterised domain (DUF2229), and CoA enzyme activase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5923_CoA_enzyme_activase_uncharacterised_domain_(DUF2229),_and_CoA_enzyme_activase


id: CL:5950
description: Mixed, incl. DDE transposase retroviral integrase sub-family, and HTH-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5950_Mixed,_incl._DDE_transposase_retroviral_integrase_sub-family,_and_HTH-like_domain


id: CL:5952
description: DDE transposase retroviral integrase sub-family, and HTH-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5952_DDE_transposase_retroviral_integrase_sub-family,_and_HTH-like_domain


id: CL:5975
description: Mixed, incl. Bacterial microcompartment, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5975_Mixed,_incl._Bacterial_microcompartment,_and_Nitrogen_metabolism


id: CL:5977
description: Bacterial microcompartment, and Hsp70 protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5977_Bacterial_microcompartment,_and_Hsp70_protein


id: CL:5979
description: CcmK-like superfamily, and Hsp70 protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5979_CcmK-like_superfamily,_and_Hsp70_protein


id: CL:5998
description: Ethanolamine catabolic process, and Ethanolamine ammonia-lyase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:5998_Ethanolamine_catabolic_process,_and_Ethanolamine_ammonia-lyase_complex


id: CL:6013
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6013_Mixed,_incl._Lactone_catabolic_process,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor

description:
  Mixed, incl. Lactone catabolic process, and Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor


id: CL:6024
description: Vitamin B6 metabolism, and PUA-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6024_Vitamin_B6_metabolism,_and_PUA-like_superfamily


id: CL:603
description: Mixed, incl. Lipid degradation, and Diacylglycerol/lipid kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:603_Mixed,_incl._Lipid_degradation,_and_Diacylglycerol/lipid_kinase


id: CL:6035
description: Mixed, incl. FAD dependent protein, and Regulation of translational initiation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6035_Mixed,_incl._FAD_dependent_protein,_and_Regulation_of_translational_initiation


id: CL:6038
description: Mixed, incl. FAD dependent protein, and Cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6038_Mixed,_incl._FAD_dependent_protein,_and_Cyclase_activity


id: CL:6062
description: Mixed, incl. PmbA/TldA metallopeptidase domain 1, and Protoporphyrinogen oxidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6062_Mixed,_incl._PmbA/TldA_metallopeptidase_domain_1,_and_Protoporphyrinogen_oxidase_activity


id: CL:6064
description: Mixed, incl. Tricarboxylic acid metabolic process, and NAD biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6064_Mixed,_incl._Tricarboxylic_acid_metabolic_process,_and_NAD_biosynthetic_process


id: CL:6082
description: PmbA/TldA metallopeptidase domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6082_PmbA/TldA_metallopeptidase_domain_1


id: CL:6095
description: Mostly uncharacterized, incl. D-aminopeptidase, and Cell wall macromolecule metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6095_Mostly_uncharacterized,_incl._D-aminopeptidase,_and_Cell_wall_macromolecule_metabolic_process


id: CL:6096
description: Mostly uncharacterized, incl. D-aminopeptidase, and Cell wall macromolecule metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6096_Mostly_uncharacterized,_incl._D-aminopeptidase,_and_Cell_wall_macromolecule_metabolic_process


id: CL:6097
description: Mixed, incl. D-aminopeptidase, and Beta-lactamase, class-A
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6097_Mixed,_incl._D-aminopeptidase,_and_Beta-lactamase,_class-A


id: CL:6098
description: Mixed, incl. Beta-lactamase, class-A, and Cell wall macromolecule catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6098_Mixed,_incl._Beta-lactamase,_class-A,_and_Cell_wall_macromolecule_catabolic_process


id: CL:6099
description: Beta-lactamase, class-A, and Cell wall macromolecule catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6099_Beta-lactamase,_class-A,_and_Cell_wall_macromolecule_catabolic_process


id: CL:6110
description: Mixed, incl. Amidase activity, and Lysozyme activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6110_Mixed,_incl._Amidase_activity,_and_Lysozyme_activity


id: CL:6120
description: Mixed, incl. D-aminopeptidase, and Aspartate racemase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6120_Mixed,_incl._D-aminopeptidase,_and_Aspartate_racemase


id: CL:6140
description: Mostly uncharacterized, incl. Helix-turn-helix domain, group 17, and YefM-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6140_Mostly_uncharacterized,_incl._Helix-turn-helix_domain,_group_17,_and_YefM-like_superfamily


id: CL:6142
description: Mostly uncharacterized, incl. RNA polymerase sigma factor, region 3/4-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6142_Mostly_uncharacterized,_incl._RNA_polymerase_sigma_factor,_region_3/4-like


id: CL:6152
description: Mixed, incl. RNA polymerase sigma factor, region 3/4-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6152_Mixed,_incl._RNA_polymerase_sigma_factor,_region_3/4-like


id: CL:6166
description: Mixed, incl. Helix-turn-helix domain, group 17, and Mor transcription activator
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6166_Mixed,_incl._Helix-turn-helix_domain,_group_17,_and_Mor_transcription_activator


id: CL:618
description: Mixed, incl. Nitroreductase-like, and Adenylyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:618_Mixed,_incl._Nitroreductase-like,_and_Adenylyltransferase_activity


id: CL:6181
description: Mostly uncharacterized, incl. Ami_2, and Baseplate protein J-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6181_Mostly_uncharacterized,_incl._Ami_2,_and_Baseplate_protein_J-like


id: CL:6184
description: NADPH regeneration, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6184_NADPH_regeneration,_and_Coiled_coil


id: CL:6206
description: Mixed, incl. HTH domain, IS21 transposase-type, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6206_Mixed,_incl._HTH_domain,_IS21_transposase-type,_and_Tetratricopeptide_repeat


id: CL:6208
description: Mixed, incl. HTH domain, IS21 transposase-type, and ATP-grasp fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6208_Mixed,_incl._HTH_domain,_IS21_transposase-type,_and_ATP-grasp_fold


id: CL:621
description: Mixed, incl. Nitroreductase, and MafB19-like deaminase
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:621_Mixed,_incl._Nitroreductase,_and_MafB19-like_deaminase


id: CL:6225
description: Mostly uncharacterized, incl. DNA modification, and Secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6225_Mostly_uncharacterized,_incl._DNA_modification,_and_Secretion


id: CL:6226
description: Mostly uncharacterized, incl. Intracellular protein-containing complex, and Secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6226_Mostly_uncharacterized,_incl._Intracellular_protein-containing_complex,_and_Secretion


id: CL:6228
description: Mostly uncharacterized, incl. Intracellular protein-containing complex, and Secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6228_Mostly_uncharacterized,_incl._Intracellular_protein-containing_complex,_and_Secretion


id: CL:6230
description: Mostly uncharacterized, incl. Intracellular protein-containing complex, and TraG, P-loop domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6230_Mostly_uncharacterized,_incl._Intracellular_protein-containing_complex,_and_TraG,_P-loop_domain


id: CL:6231
description: Mostly uncharacterized, incl. Intracellular protein-containing complex, and TraG, P-loop domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6231_Mostly_uncharacterized,_incl._Intracellular_protein-containing_complex,_and_TraG,_P-loop_domain


id: CL:6234
description: Mixed, incl. TraG, P-loop domain, and PrgI family protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6234_Mixed,_incl._TraG,_P-loop_domain,_and_PrgI_family_protein


id: CL:6236
description: Mixed, incl. Single-stranded DNA binding, and Chromatin remodeling
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6236_Mixed,_incl._Single-stranded_DNA_binding,_and_Chromatin_remodeling


id: CL:6239
description: Mixed, incl. Bacterial mobilisation, and Endonuclease relaxase, MobA/VirD2
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6239_Mixed,_incl._Bacterial_mobilisation,_and_Endonuclease_relaxase,_MobA/VirD2


id: CL:6260
description: Mixed, incl. TraG, P-loop domain, and PrgI family protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6260_Mixed,_incl._TraG,_P-loop_domain,_and_PrgI_family_protein


id: CL:6275
description: Mostly uncharacterized, incl. SAF domain, and Type IV leader peptidase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6275_Mostly_uncharacterized,_incl._SAF_domain,_and_Type_IV_leader_peptidase_family


id: CL:6277
description: Mixed, incl. SAF domain, and Type II/IV secretion system protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6277_Mixed,_incl._SAF_domain,_and_Type_II/IV_secretion_system_protein


id: CL:6298
description: Mixed, incl. YefM-like superfamily, and Toxin-antitoxin system, RelE/ParE toxin family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6298_Mixed,_incl._YefM-like_superfamily,_and_Toxin-antitoxin_system,_RelE/ParE_toxin_family


id: CL:6320
description: Mostly uncharacterized, incl. Bacterial mobilisation, and Cell morphogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6320_Mostly_uncharacterized,_incl._Bacterial_mobilisation,_and_Cell_morphogenesis


id: CL:6322
description: Mixed, incl. Bacterial mobilisation, and Cell morphogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6322_Mixed,_incl._Bacterial_mobilisation,_and_Cell_morphogenesis


id: CL:6342
description: Mixed, incl. DNA restriction-modification system, and Ribonuclease H domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6342_Mixed,_incl._DNA_restriction-modification_system,_and_Ribonuclease_H_domain


id: CL:6344
description: DNA restriction-modification system, and Mismatch repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6344_DNA_restriction-modification_system,_and_Mismatch_repair


id: CL:6368
description: Mixed, incl. ABC-2 transporter-like, and RNA degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6368_Mixed,_incl._ABC-2_transporter-like,_and_RNA_degradation


id: CL:6369
description: Mixed, incl. ABC-2 transporter-like, and Ami_2
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6369_Mixed,_incl._ABC-2_transporter-like,_and_Ami_2


id: CL:6372
description: ABC-2 transporter-like, and ABC transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6372_ABC-2_transporter-like,_and_ABC_transporter


id: CL:6388
description: Mixed, incl. Peptidase S51, and SnoaL-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6388_Mixed,_incl._Peptidase_S51,_and_SnoaL-like_domain


id: CL:6403
description: Mixed, incl. Penicillin binding, and Penicillinase repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6403_Mixed,_incl._Penicillin_binding,_and_Penicillinase_repressor


id: CL:6404
description: Mixed, incl. Penicillin binding, and Penicillinase repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6404_Mixed,_incl._Penicillin_binding,_and_Penicillinase_repressor


id: CL:6405
description: Mixed, incl. Penicillin binding, and Penicillinase repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6405_Mixed,_incl._Penicillin_binding,_and_Penicillinase_repressor


id: CL:6408
description: Peptidase M56, and Penicillinase repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6408_Peptidase_M56,_and_Penicillinase_repressor


id: CL:6425
description: Mixed, incl. VanW like protein, and Peptidase family S66
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6425_Mixed,_incl._VanW_like_protein,_and_Peptidase_family_S66


id: CL:6435
description: Mixed, incl. CAAX-box protein processing, and Penicillin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6435_Mixed,_incl._CAAX-box_protein_processing,_and_Penicillin_binding


id: CL:6453
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6453_Mixed,_incl._Six-bladed_beta-propeller,_TolB-like,_and_Bacterial_extracellular_solute-binding_protein

description:
  Mixed, incl. Six-bladed beta-propeller, TolB-like, and Bacterial extracellular solute-binding protein


id: CL:6455
description: Mixed, incl. Six-bladed beta-propeller, TolB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6455_Mixed,_incl._Six-bladed_beta-propeller,_TolB-like


id: CL:647
description: Mixed, incl. Catalase activity, and Alpha/beta hydrolase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:647_Mixed,_incl._Catalase_activity,_and_Alpha/beta_hydrolase_family


id: CL:6473
description: Mixed, incl. HTH domain, and Import into cell
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6473_Mixed,_incl._HTH_domain,_and_Import_into_cell


id: CL:6515
description: Mixed, incl. dNTP triphosphohydrolase, and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6515_Mixed,_incl._dNTP_triphosphohydrolase,_and_Pentose_phosphate_pathway


id: CL:6529
description: Mostly uncharacterized, incl. Bacteriophage Mu, GpT, and Mu-like prophage I protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6529_Mostly_uncharacterized,_incl._Bacteriophage_Mu,_GpT,_and_Mu-like_prophage_I_protein


id: CL:6530
description: Mostly uncharacterized, incl. Bacteriophage Mu, GpT, and Mu-like prophage I protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6530_Mostly_uncharacterized,_incl._Bacteriophage_Mu,_GpT,_and_Mu-like_prophage_I_protein


id: CL:6532
description: Mostly uncharacterized, incl. Bacteriophage Mu, GpT, and Mu-like prophage I protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6532_Mostly_uncharacterized,_incl._Bacteriophage_Mu,_GpT,_and_Mu-like_prophage_I_protein


id: CL:6533
description: Mostly uncharacterized, incl. Bacteriophage Mu, GpT, and Mu-like prophage I protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6533_Mostly_uncharacterized,_incl._Bacteriophage_Mu,_GpT,_and_Mu-like_prophage_I_protein


id: CL:6535
description: Mixed, incl. Bacteriophage Mu, GpT, and Mu-like prophage I protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6535_Mixed,_incl._Bacteriophage_Mu,_GpT,_and_Mu-like_prophage_I_protein


id: CL:6537
description: Mixed, incl. Bacteriophage Mu, GpT, and Mu-like prophage I protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6537_Mixed,_incl._Bacteriophage_Mu,_GpT,_and_Mu-like_prophage_I_protein


id: CL:6551
description: Mixed, incl. Bacteriophage Mu, GpT, and Baseplate protein J-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6551_Mixed,_incl._Bacteriophage_Mu,_GpT,_and_Baseplate_protein_J-like


id: CL:6565
description: Mixed, incl. Mor transcription activator, and Transposase IS3/IS911family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6565_Mixed,_incl._Mor_transcription_activator,_and_Transposase_IS3/IS911family


id: CL:6567
description: Mixed, incl. Mor transcription activator, and Double-stranded DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:6567_Mixed,_incl._Mor_transcription_activator,_and_Double-stranded_DNA_binding


id: CL:659
description: Mixed, incl. Nucleoside monophosphate metabolic process, and Histidine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:659_Mixed,_incl._Nucleoside_monophosphate_metabolic_process,_and_Histidine_biosynthetic_process


id: CL:660
description: Mixed, incl. Ribonucleoside monophosphate metabolic process, and Histidine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:660_Mixed,_incl._Ribonucleoside_monophosphate_metabolic_process,_and_Histidine_biosynthetic_process


id: CL:661
description: Ribonucleoside monophosphate metabolic process, and Histidine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:661_Ribonucleoside_monophosphate_metabolic_process,_and_Histidine_biosynthetic_process


id: CL:662
description: Ribonucleoside monophosphate metabolic process, and One-carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:662_Ribonucleoside_monophosphate_metabolic_process,_and_One-carbon_metabolism


id: CL:663
description: Mixed, incl. Purine biosynthesis, and CBS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:663_Mixed,_incl._Purine_biosynthesis,_and_CBS_domain


id: CL:665
description: Purine biosynthesis, and One-carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:665_Purine_biosynthesis,_and_One-carbon_metabolism


id: CL:687
description: CBS domain, and Phosphoribosyl transferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:687_CBS_domain,_and_Phosphoribosyl_transferase_domain


id: CL:691
description: GMP biosynthesis, and AMP binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:691_GMP_biosynthesis,_and_AMP_binding


id: CL:708
description: De novo UMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:708_De_novo_UMP_biosynthetic_process


id: CL:749
description: Nucleoside metabolic process, and Cellular metabolic compound salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:749_Nucleoside_metabolic_process,_and_Cellular_metabolic_compound_salvage


id: CL:751
description: Amino acid salvage, and Purine salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:751_Amino_acid_salvage,_and_Purine_salvage


id: CL:770
description: Pyrimidine nucleoside metabolic process, and Deoxyribonucleotide catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:770_Pyrimidine_nucleoside_metabolic_process,_and_Deoxyribonucleotide_catabolic_process


id: CL:793
description: Mixed, incl. Deoxyribonucleotide biosynthetic process, and Peptidyl-glutamine methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:793_Mixed,_incl._Deoxyribonucleotide_biosynthetic_process,_and_Peptidyl-glutamine_methylation


id: CL:795
description: Deoxyribonucleotide biosynthetic process, and Flavoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:795_Deoxyribonucleotide_biosynthetic_process,_and_Flavoprotein


id: CL:810
description: Peptidyl-glutamine methylation, and RF-1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:810_Peptidyl-glutamine_methylation,_and_RF-1_domain


id: CL:824
description: Aminotransferase class I and II, and Polysaccharide biosynthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:824_Aminotransferase_class_I_and_II,_and_Polysaccharide_biosynthesis_protein


id: CL:840
description: Mixed, incl. Alpha/beta hydrolase family, and Methyltransferase type 11
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:840_Mixed,_incl._Alpha/beta_hydrolase_family,_and_Methyltransferase_type_11


id: CL:850
description: Mixed, incl. Nitrogen fixation, and Predicted permease DUF318
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:850_Mixed,_incl._Nitrogen_fixation,_and_Predicted_permease_DUF318


id: CL:853
description: MTH1175 domain, and CobQ/CobB/MinD/ParA nucleotide binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:853_MTH1175_domain,_and_CobQ/CobB/MinD/ParA_nucleotide_binding_domain


id: CL:874
description: Mixed, incl. Helix-turn-helix XRE-family like proteins, and Sir2 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:874_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Sir2_family


id: CL:876
description: Mixed, incl. Sir2 family, and Polyamine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:876_Mixed,_incl._Sir2_family,_and_Polyamine_biosynthesis


id: CL:878
description: Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:878_Helix-turn-helix_XRE-family_like_proteins


id: CL:892
description: Mixed, incl. Sir2 family, and Import into cell
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:892_Mixed,_incl._Sir2_family,_and_Import_into_cell


id: CL:915
description: Mixed, incl. Thioredoxin-like superfamily, and Heavy-metal-associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:915_Mixed,_incl._Thioredoxin-like_superfamily,_and_Heavy-metal-associated_domain


id: CL:916
description: Mixed, incl. Detoxification, and Heavy-metal-associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:916_Mixed,_incl._Detoxification,_and_Heavy-metal-associated_domain


id: CL:917
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:917_Mixed,_incl._Disulfide_oxidoreductase_activity,_and_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor

description:
  Mixed, incl. Disulfide oxidoreductase activity, and Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor


id: CL:918
description: Mixed, incl. Disulfide oxidoreductase activity, and Cellular response to chemical stress
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:918_Mixed,_incl._Disulfide_oxidoreductase_activity,_and_Cellular_response_to_chemical_stress


id: CL:920
description: Mixed, incl. Glutathione oxidoreductase activity, and Cobalamin
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:920_Mixed,_incl._Glutathione_oxidoreductase_activity,_and_Cobalamin


id: CL:941
description: Radical-activating enzyme, conserved site, and Ribonucleoside-triphosphate reductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:941_Radical-activating_enzyme,_conserved_site,_and_Ribonucleoside-triphosphate_reductase_activity


id: CL:950
description: Mixed, incl. Heavy-metal-associated domain, and Response to arsenic-containing substance
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:950_Mixed,_incl._Heavy-metal-associated_domain,_and_Response_to_arsenic-containing_substance


id: CL:953
description: Copper ion transport, and EcsC protein family
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:953_Copper_ion_transport,_and_EcsC_protein_family


id: CL:969
description: Response to arsenic-containing substance, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:969_Response_to_arsenic-containing_substance,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:982
description: Mixed, incl. AhpC/TSA family, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1122184_STRINGid_CL:982_Mixed,_incl._AhpC/TSA_family,_and_4Fe-4S_binding_domain


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 10
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000724
description: Double-strand break repair via homologous recombination
memo: https://amigo.geneontology.org/amigo/term/GO:0000724
golevel: 9
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0000724_Double-strand_break_repair_via_homologous_recombination


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0002926
description: tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation
memo: https://amigo.geneontology.org/amigo/term/GO:0002926
golevel: 13
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0002926_tRNA_wobble_base_5-methoxycarbonylmethyl-2-thiouridinylation


id: GO:0003882
description: CDP-diacylglycerol-serine O-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003882
golevel: 6
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0003882_CDP-diacylglycerol-serine_O-phosphatidyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 6
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
golevel: 6
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 6
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004489
description: Methylenetetrahydrofolate reductase (NAD(P)H) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004489
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0004489_Methylenetetrahydrofolate_reductase_(NAD(P)H)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0005315
description: Inorganic phosphate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005315
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0005315_Inorganic_phosphate_transmembrane_transporter_activity


id: GO:0005477
description: Pyruvate secondary active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005477
golevel: 7
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0005477_Pyruvate_secondary_active_transmembrane_transporter_activity


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 11
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0008028
description: Monocarboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008028
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0008028_Monocarboxylic_acid_transmembrane_transporter_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 7
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
golevel: 6
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008817
description: cob(I)yrinic acid a,c-diamide adenosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008817
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0008817_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008939
description: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008939
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0008939_Nicotinate-nucleotide-dimethylbenzimidazole_phosphoribosyltransferase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0008982
description: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008982
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0008982_protein-N(PI)-phosphohistidine-sugar_phosphotransferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 6
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 9
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009139
description: Pyrimidine nucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009139
golevel: 9
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0009139_Pyrimidine_nucleoside_diphosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 9
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009157
description: Deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009157
golevel: 9
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0009157_Deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 10
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 9
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 10
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009175
description: Pyrimidine ribonucleoside monophosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009175
golevel: 10
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0009175_Pyrimidine_ribonucleoside_monophosphate_catabolic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 9
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 10
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 9
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 10
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 10
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 9
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 10
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009210
description: Pyrimidine ribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009210
golevel: 10
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0009210_Pyrimidine_ribonucleoside_triphosphate_catabolic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 9
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 10
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 10
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 9
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 10
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009401
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system
memo: https://amigo.geneontology.org/amigo/term/GO:0009401
golevel: 8
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0009401_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 6
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 6
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 6
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0010604
description: Positive regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010604
golevel: 5
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0010604_Positive_regulation_of_macromolecule_metabolic_process


id: GO:0010605
description: Negative regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010605
golevel: 5
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0010605_Negative_regulation_of_macromolecule_metabolic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
golevel: 3
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015355
description: Secondary active monocarboxylate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015355
golevel: 6
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0015355_Secondary_active_monocarboxylate_transmembrane_transporter_activity


id: GO:0015415
description: ATPase-coupled phosphate ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015415
golevel: 7
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0015415_ATPase-coupled_phosphate_ion_transmembrane_transporter_activity


id: GO:0015451
description: Decarboxylation-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015451
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0015451_Decarboxylation-driven_active_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015658
description: Branched-chain amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015658
golevel: 6
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0015658_Branched-chain_amino_acid_transmembrane_transporter_activity


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016625
memo: https://amigo.geneontology.org/amigo/term/GO:0016625
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016625_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_iron-sulfur_protein_as_acceptor

description:
  Oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016641
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016641
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016641_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_oxygen_as_acceptor


id: GO:0016642
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016642
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016642_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_disulfide_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016652
description: Oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016652
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016652_Oxidoreductase_activity,_acting_on_NAD(P)H,_NAD(P)_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016657
description: Oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016657
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016657_Oxidoreductase_activity,_acting_on_NAD(P)H,_nitrogenous_group_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016699
description: Oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016699
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016699_Oxidoreductase_activity,_acting_on_hydrogen_as_donor,_iron-sulfur_protein_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016702
memo: https://amigo.geneontology.org/amigo/term/GO:0016702
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016702_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen


id: GO:0016703
memo: https://amigo.geneontology.org/amigo/term/GO:0016703
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016703_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_one_atom_of_oxygen_(internal_monooxygenases_or_internal_mixed_function_oxidases)

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)


id: GO:0016705
memo: https://amigo.geneontology.org/amigo/term/GO:0016705
golevel: 3
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016705_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: GO:0016716
memo: https://amigo.geneontology.org/amigo/term/GO:0016716
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016716_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_another_compound_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen


id: GO:0016721
description: Oxidoreductase activity, acting on superoxide radicals as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016721
golevel: 3
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016721_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016773
description: Phosphotransferase activity, alcohol group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016773
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016773_Phosphotransferase_activity,_alcohol_group_as_acceptor


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
golevel: 6
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016837
description: Carbon-oxygen lyase activity, acting on polysaccharides
memo: https://amigo.geneontology.org/amigo/term/GO:0016837
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016837_Carbon-oxygen_lyase_activity,_acting_on_polysaccharides


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016867
description: Intramolecular transferase activity, transferring acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016867
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016867_Intramolecular_transferase_activity,_transferring_acyl_groups


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016869
description: Intramolecular transferase activity, transferring amino groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016869
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016869_Intramolecular_transferase_activity,_transferring_amino_groups


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016888
description: Endodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016888
golevel: 7
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016888_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016889
description: Endodeoxyribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016889
golevel: 7
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016889_Endodeoxyribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 7
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
golevel: 6
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016894
memo: https://amigo.geneontology.org/amigo/term/GO:0016894
golevel: 6
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016894_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_3-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 7
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016896
description: Exoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016896
golevel: 7
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016896_Exoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0017183
description: Peptidyl-diphthamide biosynthetic process from peptidyl-histidine
memo: https://amigo.geneontology.org/amigo/term/GO:0017183
golevel: 11
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0017183_Peptidyl-diphthamide_biosynthetic_process_from_peptidyl-histidine


id: GO:0018339
description: peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid
memo: https://amigo.geneontology.org/amigo/term/GO:0018339
golevel: 8
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0018339_peptidyl-L-beta-methylthioaspartic_acid_biosynthetic_process_from_peptidyl-aspartic_acid


id: GO:0019171
description: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019171
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0019171_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 5
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019243
description: Methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
memo: https://amigo.geneontology.org/amigo/term/GO:0019243
golevel: 9
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0019243_Methylglyoxal_catabolic_process_to_D-lactate_via_S-lactoyl-glutathione


id: GO:0019288
description: Isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019288
golevel: 8
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0019288_Isopentenyl_diphosphate_biosynthetic_process,_methylerythritol_4-phosphate_pathway


id: GO:0019556
description: Histidine catabolic process to glutamate and formamide
memo: https://amigo.geneontology.org/amigo/term/GO:0019556
golevel: 10
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0019556_Histidine_catabolic_process_to_glutamate_and_formamide


id: GO:0019829
description: ATPase-coupled cation transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019829
golevel: 6
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0019829_ATPase-coupled_cation_transmembrane_transporter_activity


id: GO:0030435
description: Sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0030435
golevel: 3
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0030435_Sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0030604
description: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030604
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0030604_1-deoxy-D-xylulose-5-phosphate_reductoisomerase_activity


id: GO:0030613
description: Oxidoreductase activity, acting on phosphorus or arsenic in donors
memo: https://amigo.geneontology.org/amigo/term/GO:0030613
golevel: 3
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0030613_Oxidoreductase_activity,_acting_on_phosphorus_or_arsenic_in_donors


id: GO:0030614
description: Oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0030614
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0030614_Oxidoreductase_activity,_acting_on_phosphorus_or_arsenic_in_donors,_disulfide_as_acceptor


id: GO:0031234
description: Extrinsic component of cytoplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031234
golevel: 6
name:
  GOCC.STRING_v12.0_1122184_STRINGid_GO:0031234_Extrinsic_component_of_cytoplasmic_side_of_plasma_membrane


id: GO:0031250
description: Anaerobic ribonucleoside-triphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031250
golevel: 4
name:
  GOCC.STRING_v12.0_1122184_STRINGid_GO:0031250_Anaerobic_ribonucleoside-triphosphate_reductase_complex


id: GO:0031554
description: Regulation of DNA-templated transcription, termination
memo: https://amigo.geneontology.org/amigo/term/GO:0031554
golevel: 11
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0031554_Regulation_of_DNA-templated_transcription,_termination


id: GO:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
golevel: 3
name:
  GOCC.STRING_v12.0_1122184_STRINGid_GO:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GO:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
golevel: 3
name:
  GOCC.STRING_v12.0_1122184_STRINGid_GO:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GO:0033283
description: ATPase-coupled organic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033283
golevel: 6
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0033283_ATPase-coupled_organic_acid_transmembrane_transporter_activity


id: GO:0033284
description: ATPase-coupled carboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033284
golevel: 7
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0033284_ATPase-coupled_carboxylic_acid_transmembrane_transporter_activity


id: GO:0033744
description: L-methionine:thioredoxin-disulfide S-oxidoreductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033744
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0033744_L-methionine:thioredoxin-disulfide_S-oxidoreductase_activity


id: GO:0033818
description: Beta-ketoacyl-acyl-carrier-protein synthase III activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033818
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0033818_Beta-ketoacyl-acyl-carrier-protein_synthase_III_activity


id: GO:0034023
description: 5-(carboxyamino)imidazole ribonucleotide mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034023
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0034023_5-(carboxyamino)imidazole_ribonucleotide_mutase_activity


id: GO:0034036
description: Purine ribonucleoside bisphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034036
golevel: 10
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0034036_Purine_ribonucleoside_bisphosphate_biosynthetic_process


id: GO:0034249
description: Negative regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034249
golevel: 6
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0034249_Negative_regulation_of_cellular_amide_metabolic_process


id: GO:0034250
description: Positive regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034250
golevel: 6
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0034250_Positive_regulation_of_cellular_amide_metabolic_process


id: GO:0034404
description: Nucleobase-containing small molecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034404
golevel: 6
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0034404_Nucleobase-containing_small_molecule_biosynthetic_process


id: GO:0034656
description: Nucleobase-containing small molecule catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034656
golevel: 6
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0034656_Nucleobase-containing_small_molecule_catabolic_process


id: GO:0035592
description: Establishment of protein localization to extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0035592
golevel: 6
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0035592_Establishment_of_protein_localization_to_extracellular_region


id: GO:0035598
description: N6-threonylcarbomyladenosine methylthiotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0035598
golevel: 6
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0035598_N6-threonylcarbomyladenosine_methylthiotransferase_activity


id: GO:0036361
description: Racemase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0036361
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0036361_Racemase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0036381
description: Pyridoxal 5-phosphate synthase (glutamine hydrolysing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0036381
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0036381_Pyridoxal_5-phosphate_synthase_(glutamine_hydrolysing)_activity


id: GO:0042083
description: 5,10-methylenetetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042083
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0042083_5,10-methylenetetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042084
description: 5-methyltetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042084
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0042084_5-methyltetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042173
description: Regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042173
golevel: 6
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0042173_Regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0042174
description: Negative regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042174
golevel: 7
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0042174_Negative_regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0042777
description: Proton motive force-driven plasma membrane ATP synthesis
memo: https://amigo.geneontology.org/amigo/term/GO:0042777
golevel: 13
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0042777_Proton_motive_force-driven_plasma_membrane_ATP_synthesis


id: GO:0043225
description: ATPase-coupled inorganic anion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043225
golevel: 6
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0043225_ATPase-coupled_inorganic_anion_transmembrane_transporter_activity


id: GO:0043242
description: Negative regulation of protein-containing complex disassembly
memo: https://amigo.geneontology.org/amigo/term/GO:0043242
golevel: 7
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0043242_Negative_regulation_of_protein-containing_complex_disassembly


id: GO:0043365
description: [formate-C-acetyltransferase]-activating enzyme activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043365
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0043365_[formate-C-acetyltransferase]-activating_enzyme_activity


id: GO:0043772
description: Acyl-phosphate glycerol-3-phosphate acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043772
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0043772_Acyl-phosphate_glycerol-3-phosphate_acyltransferase_activity


id: GO:0043811
description: Phosphate:acyl-[acyl carrier protein] acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043811
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0043811_Phosphate:acyl-[acyl_carrier_protein]_acyltransferase_activity


id: GO:0044419
description: Biological process involved in interspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0044419
golevel: 1
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0044419_Biological_process_involved_in_interspecies_interaction_between_organisms


id: GO:0044769
description: ATPase activity, coupled to transmembrane movement of ions, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0044769
golevel: 7
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0044769_ATPase_activity,_coupled_to_transmembrane_movement_of_ions,_rotational_mechanism


id: GO:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
golevel: 6
name:
  GOCC.STRING_v12.0_1122184_STRINGid_GO:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GO:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
golevel: 6
name:
  GOCC.STRING_v12.0_1122184_STRINGid_GO:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GO:0045717
description: Negative regulation of fatty acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045717
golevel: 10
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0045717_Negative_regulation_of_fatty_acid_biosynthetic_process


id: GO:0045881
description: Positive regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0045881
golevel: 7
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0045881_Positive_regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0045934
description: Negative regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045934
golevel: 6
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0045934_Negative_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0045935
description: Positive regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045935
golevel: 6
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0045935_Positive_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0046429
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046429
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0046429_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_synthase_activity


id: GO:0046537
description: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046537
golevel: 6
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0046537_2,3-bisphosphoglycerate-independent_phosphoglycerate_mutase_activity


id: GO:0046912
description: Acyltransferase activity, acyl groups converted into alkyl on transfer
memo: https://amigo.geneontology.org/amigo/term/GO:0046912
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0046912_Acyltransferase_activity,_acyl_groups_converted_into_alkyl_on_transfer


id: GO:0046915
description: Transition metal ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046915
golevel: 6
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0046915_Transition_metal_ion_transmembrane_transporter_activity


id: GO:0046933
description: Proton-transporting ATP synthase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046933
golevel: 8
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0046933_Proton-transporting_ATP_synthase_activity,_rotational_mechanism


id: GO:0046961
description: Proton-transporting ATPase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046961
golevel: 8
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0046961_Proton-transporting_ATPase_activity,_rotational_mechanism


id: GO:0046992
description: Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond
memo: https://amigo.geneontology.org/amigo/term/GO:0046992
golevel: 3
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0046992_Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond


id: GO:0047451
description: 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047451
golevel: 6
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0047451_3-hydroxyoctanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0047480
description: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047480
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0047480_UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine_ligase_activity


id: GO:0048646
description: Anatomical structure formation involved in morphogenesis
memo: https://amigo.geneontology.org/amigo/term/GO:0048646
golevel: 2
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0048646_Anatomical_structure_formation_involved_in_morphogenesis


id: GO:0050485
description: Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0050485
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0050485_Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond,_with_a_disulfide_as_acceptor


id: GO:0050511
description: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050511
golevel: 6
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0050511_Undecaprenyldiphospho-muramoylpentapeptide_beta-N-acetylglucosaminyltransferase_activity


id: GO:0050515
description: 4-(cytidine 5-diphospho)-2-C-methyl-D-erythritol kinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050515
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0050515_4-(cytidine_5-diphospho)-2-C-methyl-D-erythritol_kinase_activity


id: GO:0050518
description: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050518
golevel: 6
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0050518_2-C-methyl-D-erythritol_4-phosphate_cytidylyltransferase_activity


id: GO:0050566
description: asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050566
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0050566_asparaginyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0050567
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050567
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0050567_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0051003
description: Ligase activity, forming nitrogen-metal bonds, forming coordination complexes
memo: https://amigo.geneontology.org/amigo/term/GO:0051003
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0051003_Ligase_activity,_forming_nitrogen-metal_bonds,_forming_coordination_complexes


id: GO:0051075
description: S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051075
golevel: 3
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0051075_S-adenosylmethionine:tRNA_ribosyltransferase-isomerase_activity


id: GO:0051129
description: Negative regulation of cellular component organization
memo: https://amigo.geneontology.org/amigo/term/GO:0051129
golevel: 5
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0051129_Negative_regulation_of_cellular_component_organization


id: GO:0051172
description: Negative regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051172
golevel: 5
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0051172_Negative_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051173
description: Positive regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051173
golevel: 5
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0051173_Positive_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051240
description: Positive regulation of multicellular organismal process
memo: https://amigo.geneontology.org/amigo/term/GO:0051240
golevel: 4
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0051240_Positive_regulation_of_multicellular_organismal_process


id: GO:0051703
description: Biological process involved in intraspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0051703
golevel: 1
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0051703_Biological_process_involved_in_intraspecies_interaction_between_organisms


id: GO:0051745
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051745
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0051745_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_reductase_activity


id: GO:0051748
description: UTP-monosaccharide-1-phosphate uridylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051748
golevel: 6
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0051748_UTP-monosaccharide-1-phosphate_uridylyltransferase_activity


id: GO:0051991
memo: https://amigo.geneontology.org/amigo/term/GO:0051991
golevel: 6
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0051991_UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol_4-beta-N-acetylglucosaminlytransferase_activity

description:
  UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity


id: GO:0051992
memo: https://amigo.geneontology.org/amigo/term/GO:0051992
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0051992_UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate_transferase_activity

description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity


id: GO:0052592
description: Oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0052592
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0052592_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_with_an_iron-sulfur_protein_as_acceptor


id: GO:0052890
description: Oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0052890
golevel: 4
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0052890_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_with_a_flavin_as_acceptor


id: GO:0052908
description: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052908
golevel: 9
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0052908_16S_rRNA_(adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase_activity


id: GO:0055052
description: ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing
memo: https://amigo.geneontology.org/amigo/term/GO:0055052
golevel: 7
name:
  GOCC.STRING_v12.0_1122184_STRINGid_GO:0055052_ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing


id: GO:0055086
description: Nucleobase-containing small molecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0055086
golevel: 3
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0055086_Nucleobase-containing_small_molecule_metabolic_process


id: GO:0060567
description: Negative regulation of DNA-templated transcription, termination
memo: https://amigo.geneontology.org/amigo/term/GO:0060567
golevel: 12
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0060567_Negative_regulation_of_DNA-templated_transcription,_termination


id: GO:0061504
description: Cyclic threonylcarbamoyladenosine biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0061504
golevel: 11
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0061504_Cyclic_threonylcarbamoyladenosine_biosynthetic_process


id: GO:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
golevel: 4
name:
  GOCC.STRING_v12.0_1122184_STRINGid_GO:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GO:0062014
description: Negative regulation of small molecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0062014
golevel: 5
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0062014_Negative_regulation_of_small_molecule_metabolic_process


id: GO:0070647
description: Protein modification by small protein conjugation or removal
memo: https://amigo.geneontology.org/amigo/term/GO:0070647
golevel: 6
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0070647_Protein_modification_by_small_protein_conjugation_or_removal


id: GO:0071951
description: Conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
memo: https://amigo.geneontology.org/amigo/term/GO:0071951
golevel: 12
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0071951_Conversion_of_methionyl-tRNA_to_N-formyl-methionyl-tRNA


id: GO:0072349
description: Modified amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0072349
golevel: 3
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0072349_Modified_amino_acid_transmembrane_transporter_activity


id: GO:0072531
description: Pyrimidine-containing compound transmembrane transport
memo: https://amigo.geneontology.org/amigo/term/GO:0072531
golevel: 5
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0072531_Pyrimidine-containing_compound_transmembrane_transport


id: GO:0072599
description: Establishment of protein localization to endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0072599
golevel: 7
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0072599_Establishment_of_protein_localization_to_endoplasmic_reticulum


id: GO:0097588
description: Archaeal or bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:0097588
golevel: 4
name:
  GOBP.STRING_v12.0_1122184_STRINGid_GO:0097588_Archaeal_or_bacterial-type_flagellum-dependent_cell_motility


id: GO:0102027
description: S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102027
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0102027_S-adenosylmethionine:2-demethylquinol-8_methyltransferase_activity


id: GO:0102094
description: S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102094
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0102094_S-adenosylmethionine:2-demethylmenaquinol_methyltransferase_activity


id: GO:0102955
description: S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102955
golevel: 5
name:
  GOMF.STRING_v12.0_1122184_STRINGid_GO:0102955_S-adenosylmethionine:2-demethylmenaquinol-7_methyltransferase_activity


