# geneInfo

ensembl_gene_id: CL52_00005
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: CL52_00010
symbol: AJE13501.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of  [...]


ensembl_gene_id: CL52_00015
symbol: recF
gene_biotype: protein_coding
description:
  Recombinase RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: CL52_00020
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: CL52_00025
symbol: AJE13504.1
gene_biotype: protein_coding
description:
  Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00030
symbol: AJE13505.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00035
symbol: AJE13506.1
gene_biotype: protein_coding
description:
  Glycerol acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00040
symbol: AJE13507.1
gene_biotype: protein_coding
description:
  D,D-heptose 1,7-bisphosphate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00045
symbol: glyS
gene_biotype: protein_coding
description:
  glycine-tRNA synthetase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00050
symbol: glyQ
gene_biotype: protein_coding
description:
  glycyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00055
symbol: AJE13510.1
gene_biotype: protein_coding
description:
  3-methyladenine DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00060
symbol: AJE13511.1
gene_biotype: protein_coding
description:
  Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00065
symbol: AJE13512.1
gene_biotype: protein_coding
description:
  Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00070
symbol: AJE13513.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00075
symbol: AJE13514.1
gene_biotype: protein_coding
description:
  Arginine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00080
symbol: AJE13515.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00090
symbol: AJE13517.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00095
symbol: trkA
gene_biotype: protein_coding
description:
  Involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00100
symbol: AJE13519.1
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: CL52_00105
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: CL52_00110
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: CL52_00115
symbol: AJE13522.1
gene_biotype: protein_coding
description:
  Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00120
symbol: AJE13523.1
gene_biotype: protein_coding
description:
  DNA processing protein DprA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00125
symbol: tsaC
gene_biotype: protein_coding
description:
  tRNA threonylcarbamoyladenosine biosynthesis protein RimN; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-)/CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate.


ensembl_gene_id: CL52_00130
symbol: AJE13525.1
gene_biotype: protein_coding
description:
  Quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00135
symbol: hemF
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.


ensembl_gene_id: CL52_00145
symbol: AJE13528.1
gene_biotype: protein_coding
description:
  TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00150
symbol: AJE13529.1
gene_biotype: protein_coding
description:
  Sodium:proline symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00155
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: CL52_00160
symbol: AJE13531.1
gene_biotype: protein_coding
description:
  NADH-flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00170
symbol: AJE13533.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine endopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family.


ensembl_gene_id: CL52_00175
symbol: AJE13534.1
gene_biotype: protein_coding
description:
  Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00180
symbol: AJE13535.1
gene_biotype: protein_coding
description:
  Phosphoglucomutase; Catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00190
symbol: AJE13537.1
gene_biotype: protein_coding
description:
  LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: CL52_00195
symbol: AJE13538.1
gene_biotype: protein_coding
description:
  MFS sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00220
symbol: AJE13543.1
gene_biotype: protein_coding
description:
  S-transferase; YghU; B2989; one of eight putative glutathione transferase proteins from E. coli; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00225
symbol: AJE13544.1
gene_biotype: protein_coding
description:
  XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00230
symbol: AJE13545.1
gene_biotype: protein_coding
description:
  Phosphatidylinositol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00240
symbol: AJE13547.1
gene_biotype: protein_coding
description:
  Fe-S oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00245
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: CL52_00250
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: CL52_00260
symbol: AJE13551.1
gene_biotype: protein_coding
description:
  Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00270
symbol: AJE13553.1
gene_biotype: protein_coding
description:
  UDP-glucose 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: CL52_00275
symbol: AJE13554.1
gene_biotype: protein_coding
description:
  Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00280
symbol: AJE13555.1
gene_biotype: protein_coding
description:
  UDP-galactopyranose mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00285
symbol: AJE13556.1
gene_biotype: protein_coding
description:
  Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00290
symbol: AJE13557.1
gene_biotype: protein_coding
description:
  ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00310
symbol: AJE13561.1
gene_biotype: protein_coding
description:
  Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00320
symbol: AJE13563.1
gene_biotype: protein_coding
description:
  Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00325
symbol: AJE13564.1
gene_biotype: protein_coding
description:
  isovaleryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00330
symbol: AJE13565.1
gene_biotype: protein_coding
description:
  3-carboxymuconate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00355
symbol: AJE13568.1
gene_biotype: protein_coding
description:
  SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methyltransferase superfamily.


ensembl_gene_id: CL52_00360
symbol: AJE13569.1
gene_biotype: protein_coding
description:
  Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00365
symbol: AJE13570.1
gene_biotype: protein_coding
description:
  Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00370
symbol: cyoE
gene_biotype: protein_coding
description:
  Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.


ensembl_gene_id: CL52_00375
symbol: AJE13572.1
gene_biotype: protein_coding
description:
  Cytochrome B561; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00395
symbol: AJE13576.1
gene_biotype: protein_coding
description:
  MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00400
symbol: AJE13577.1
gene_biotype: protein_coding
description:
  Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00405
symbol: AJE13578.1
gene_biotype: protein_coding
description:
  Cytochrome oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.


ensembl_gene_id: CL52_00410
symbol: AJE13579.1
gene_biotype: protein_coding
description:
  Cytochrome B559 subunit alpha; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).


ensembl_gene_id: CL52_00415
symbol: AJE13580.1
gene_biotype: protein_coding
description:
  Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00420
symbol: AJE13581.1
gene_biotype: protein_coding
description:
  Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00425
symbol: AJE13582.1
gene_biotype: protein_coding
description:
  Sugar acetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00430
symbol: AJE13583.1
gene_biotype: protein_coding
description:
  DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00440
symbol: AJE13585.1
gene_biotype: protein_coding
description:
  Bile acid:sodium symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00445
symbol: AJE13586.1
gene_biotype: protein_coding
description:
  AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00450
symbol: AJE13587.1
gene_biotype: protein_coding
description:
  Anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00470
symbol: AJE13591.1
gene_biotype: protein_coding
description:
  Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00485
symbol: AJE13594.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00490
symbol: AJE13595.1
gene_biotype: protein_coding
description:
  Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00495
symbol: AJE13596.1
gene_biotype: protein_coding
description:
  Lysine transporter LysE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00505
symbol: AJE13598.1
gene_biotype: protein_coding
description:
  Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00515
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: CL52_00530
symbol: uvrD
gene_biotype: protein_coding
description:
  DNA-dependent helicase II; Unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00535
symbol: AJE13604.1
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.


ensembl_gene_id: CL52_00545
symbol: AJE13606.1
gene_biotype: protein_coding
description:
  Sulfate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00550
symbol: AJE13607.1
gene_biotype: protein_coding
description:
  Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: CL52_00555
symbol: AJE13608.1
gene_biotype: protein_coding
description:
  Formate dehydrogenase; The beta chain is an electron transfer unit containing 4 cysteine clusters involved in the formation of iron-sulfur centers.


ensembl_gene_id: CL52_00560
symbol: AJE13609.1
gene_biotype: protein_coding
description:
  Formate dehydrogenase; Cytochrome b556(FDO) component; heme containing; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00570
symbol: selA
gene_biotype: protein_coding
description:
  Selenocysteine synthase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.


ensembl_gene_id: CL52_00575
symbol: AJE13612.1
gene_biotype: protein_coding
description:
  Translation elongation factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00580
symbol: AJE13613.1
gene_biotype: protein_coding
description:
  Lipid kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00585
symbol: AJE13614.1
gene_biotype: protein_coding
description:
  Lauroyl acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00595
symbol: AJE13616.1
gene_biotype: protein_coding
description:
  2OG-Fe(II) oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron/ascorbate-dependent oxidoreductase family.


ensembl_gene_id: CL52_00605
symbol: AJE13618.1
gene_biotype: protein_coding
description:
  Urea carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00625
symbol: AJE13621.1
gene_biotype: protein_coding
description:
  Allophanate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00640
symbol: AJE13623.1
gene_biotype: protein_coding
description:
  D-threo-aldose 1-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00645
symbol: AJE13624.1
gene_biotype: protein_coding
description:
  Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00655
symbol: AJE13626.1
gene_biotype: protein_coding
description:
  3-hydroxybutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00660
symbol: AJE13627.1
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00665
symbol: AJE13628.1
gene_biotype: protein_coding
description:
  Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00670
symbol: AJE13629.1
gene_biotype: protein_coding
description:
  Creatininase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00675
symbol: AJE13630.1
gene_biotype: protein_coding
description:
  Cysteine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00685
symbol: AJE13632.1
gene_biotype: protein_coding
description:
  Nitrate transport permease nrtB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00690
symbol: AJE13633.1
gene_biotype: protein_coding
description:
  Sulfonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00700
symbol: AJE13634.1
gene_biotype: protein_coding
description:
  Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family.


ensembl_gene_id: CL52_00720
symbol: AJE13637.1
gene_biotype: protein_coding
description:
  Glycine cleavage system protein H; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00725
symbol: AJE13638.1
gene_biotype: protein_coding
description:
  Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00730
symbol: AJE13639.1
gene_biotype: protein_coding
description:
  Fatty acid methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00735
symbol: AJE13640.1
gene_biotype: protein_coding
description:
  Universal stress protein UspA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00740
symbol: AJE13641.1
gene_biotype: protein_coding
description:
  Sulfate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00745
symbol: AJE13642.1
gene_biotype: protein_coding
description:
  Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00750
symbol: AJE13643.1
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein CcmE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00755
symbol: AJE13644.1
gene_biotype: protein_coding
description:
  C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00765
symbol: AJE13646.1
gene_biotype: protein_coding
description:
  ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00770
symbol: AJE13647.1
gene_biotype: protein_coding
description:
  Restriction endonuclease subunit R; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00780
symbol: AJE13649.1
gene_biotype: protein_coding
description:
  N-6 DNA methylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00790
symbol: AJE17335.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: CL52_00825
symbol: gabD
gene_biotype: protein_coding
description:
  Succinate-semialdehyde dehydrogenase; Catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00835
symbol: AJE13654.1
gene_biotype: protein_coding
description:
  3-hydroxyacyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: CL52_00840
symbol: AJE13655.1
gene_biotype: protein_coding
description:
  acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00850
symbol: AJE13657.1
gene_biotype: protein_coding
description:
  Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00855
symbol: AJE13658.1
gene_biotype: protein_coding
description:
  TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00860
symbol: AJE13659.1
gene_biotype: protein_coding
description:
  IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00865
symbol: rpmB
gene_biotype: protein_coding
description:
  50S ribosomal protein L28; Required for 70S ribosome assembly; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family.


ensembl_gene_id: CL52_00870
symbol: rpmG
gene_biotype: protein_coding
description:
  50S ribosomal protein L33; In Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00875
symbol: AJE13662.1
gene_biotype: protein_coding
description:
  Omega amino acid--pyruvate aminotransferase; Catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: CL52_00880
symbol: AJE13663.1
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: CL52_00900
symbol: AJE13667.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00935
symbol: AJE13674.1
gene_biotype: protein_coding
description:
  Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00945
symbol: AJE13676.1
gene_biotype: protein_coding
description:
  Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00950
symbol: AJE13677.1
gene_biotype: protein_coding
description:
  ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family.


ensembl_gene_id: CL52_00955
symbol: AJE13678.1
gene_biotype: protein_coding
description:
  Type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00975
symbol: AJE13682.1
gene_biotype: protein_coding
description:
  Type IV secretion protein Rhs; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_00995
symbol: AJE13686.1
gene_biotype: protein_coding
description:
  Type VI secretion protein ImpA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01000
symbol: AJE13687.1
gene_biotype: protein_coding
description:
  Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glucose-6-phosphate 1-epimerase family.


ensembl_gene_id: CL52_01005
symbol: AJE13688.1
gene_biotype: protein_coding
description:
  ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01015
symbol: AJE13690.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: CL52_01025
symbol: AJE13692.1
gene_biotype: protein_coding
description:
  Choline transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BCCT transporter (TC 2.A.15) family.


ensembl_gene_id: CL52_01045
symbol: AJE13696.1
gene_biotype: protein_coding
description:
  RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01050
symbol: AJE13697.1
gene_biotype: protein_coding
description:
  Topoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01075
symbol: AJE13701.1
gene_biotype: protein_coding
description:
  AlpA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01085
symbol: AJE13702.1
gene_biotype: protein_coding
description:
  Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.


ensembl_gene_id: CL52_01100
symbol: AJE13704.1
gene_biotype: protein_coding
description:
  Iron transporter; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes.


ensembl_gene_id: CL52_01110
symbol: AJE13706.1
gene_biotype: protein_coding
description:
  Cell envelope biogenesis protein AsmA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01115
symbol: AJE13707.1
gene_biotype: protein_coding
description:
  Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01120
symbol: hisB
gene_biotype: protein_coding
description:
  Imidazoleglycerol-phosphate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01125
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: CL52_01130
symbol: AJE13710.1
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01135
symbol: hisA
gene_biotype: protein_coding
description:
  Catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01140
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: CL52_01160
symbol: AJE13716.1
gene_biotype: protein_coding
description:
  Polysaccharide deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01165
symbol: AJE13717.1
gene_biotype: protein_coding
description:
  Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family.


ensembl_gene_id: CL52_01170
symbol: AJE13718.1
gene_biotype: protein_coding
description:
  Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01175
symbol: gpmI
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: CL52_01180
symbol: AJE13720.1
gene_biotype: protein_coding
description:
  Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01185
symbol: AJE13721.1
gene_biotype: protein_coding
description:
  Glutaredoxin; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.


ensembl_gene_id: CL52_01190
symbol: secB
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.


ensembl_gene_id: CL52_01195
symbol: AJE13723.1
gene_biotype: protein_coding
description:
  NADPH:quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01200
symbol: AJE13724.1
gene_biotype: protein_coding
description:
  Flagellar basal body protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: CL52_01215
symbol: AJE13726.1
gene_biotype: protein_coding
description:
  5-formyltetrahydrofolate cyclo-ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.


ensembl_gene_id: CL52_01220
symbol: AJE13727.1
gene_biotype: protein_coding
description:
  Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: CL52_01230
symbol: AJE13729.1
gene_biotype: protein_coding
description:
  Hypothetical protein; The crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers; function unknown; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0149 family.


ensembl_gene_id: CL52_01235
symbol: AJE13730.1
gene_biotype: protein_coding
description:
  Xaa-Pro aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01240
symbol: AJE13731.1
gene_biotype: protein_coding
description:
  2-octaprenyl-6-methoxyphenyl hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01245
symbol: AJE13732.1
gene_biotype: protein_coding
description:
  2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01250
symbol: AJE13733.1
gene_biotype: protein_coding
description:
  Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01255
symbol: AJE13734.1
gene_biotype: protein_coding
description:
  Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01260
symbol: gcvT
gene_biotype: protein_coding
description:
  Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine.


ensembl_gene_id: CL52_01265
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: CL52_01270
symbol: gcvP
gene_biotype: protein_coding
description:
  Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.


ensembl_gene_id: CL52_01275
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: CL52_01285
symbol: AJE13740.1
gene_biotype: protein_coding
description:
  Thiol:disulfide interchange protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01290
symbol: AJE13741.1
gene_biotype: protein_coding
description:
  Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01300
symbol: AJE13743.1
gene_biotype: protein_coding
description:
  N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01345
symbol: AJE13752.1
gene_biotype: protein_coding
description:
  Tripartite tricarboxylate transporter TctA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01355
symbol: AJE13754.1
gene_biotype: protein_coding
description:
  Tricarboxylic transport membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01375
symbol: AJE13758.1
gene_biotype: protein_coding
description:
  Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01390
symbol: AJE13760.1
gene_biotype: protein_coding
description:
  C4-dicarboxylate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01410
symbol: recC
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V subunit gamma; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and re [...]


ensembl_gene_id: CL52_01415
symbol: recB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V subunit beta; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and rep [...]


ensembl_gene_id: CL52_01420
symbol: recD
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V subunit alpha; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and re [...]


ensembl_gene_id: CL52_01440
symbol: AJE13770.1
gene_biotype: protein_coding
description:
  Long-chain acyl-CoA thioester hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01445
symbol: AJE13771.1
gene_biotype: protein_coding
description:
  Phosphate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01450
symbol: AJE13772.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01460
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: CL52_01470
symbol: AJE13776.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: CL52_01480
symbol: AJE13778.1
gene_biotype: protein_coding
description:
  GTPase SAR1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01495
symbol: AJE13781.1
gene_biotype: protein_coding
description:
  Uracil permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01500
symbol: AJE13782.1
gene_biotype: protein_coding
description:
  Diacylglycerol kinase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: CL52_01515
symbol: AJE13785.1
gene_biotype: protein_coding
description:
  Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01520
symbol: AJE13786.1
gene_biotype: protein_coding
description:
  Fe-S-oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01525
symbol: AJE13787.1
gene_biotype: protein_coding
description:
  Maltodextrin phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: CL52_01530
symbol: fbp
gene_biotype: protein_coding
description:
  Fructose 1,6-bisphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FBPase class 1 family.


ensembl_gene_id: CL52_01545
symbol: AJE13791.1
gene_biotype: protein_coding
description:
  Lipocalin; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids.


ensembl_gene_id: CL52_01555
symbol: AJE13793.1
gene_biotype: protein_coding
description:
  Proline iminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S33 family.


ensembl_gene_id: CL52_01560
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: CL52_01570
symbol: AJE13796.1
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: CL52_01575
symbol: tatC
gene_biotype: protein_coding
description:
  Twin-arginine protein translocation system subunit TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: CL52_01580
symbol: tatB
gene_biotype: protein_coding
description:
  Preprotein translocase; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.


ensembl_gene_id: CL52_01585
symbol: tatA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: CL52_01590
symbol: hisE
gene_biotype: protein_coding
description:
  phosphoribosyl-ATP pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01595
symbol: hisI
gene_biotype: protein_coding
description:
  phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.


ensembl_gene_id: CL52_01600
symbol: ubiB
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis protein UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis.


ensembl_gene_id: CL52_01605
symbol: AJE13803.1
gene_biotype: protein_coding
description:
  Sterol-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01610
symbol: ubiE
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: CL52_01615
symbol: AJE13805.1
gene_biotype: protein_coding
description:
  Polyhydroxyalkanoic acid system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01625
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: CL52_01630
symbol: hslV
gene_biotype: protein_coding
description:
  ATP-dependent protease subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: CL52_01635
symbol: trmL
gene_biotype: protein_coding
description:
  rRNA methylase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.


ensembl_gene_id: CL52_01645
symbol: glnG
gene_biotype: protein_coding
description:
  Nitrogen regulation protein NR(I); Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes.


ensembl_gene_id: CL52_01655
symbol: AJE13813.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01665
symbol: glnA
gene_biotype: protein_coding
description:
  Forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues; addition of adenylyl groups results in inactivation of the enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01670
symbol: thiI
gene_biotype: protein_coding
description:
  tRNA s(4)U8 sulfurtransferase; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.


ensembl_gene_id: CL52_01675
symbol: AJE13817.1
gene_biotype: protein_coding
description:
  GTP-binding protein TypA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01680
symbol: AJE13818.1
gene_biotype: protein_coding
description:
  Recombinase XerD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.


ensembl_gene_id: CL52_01720
symbol: AJE13821.1
gene_biotype: protein_coding
description:
  Phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01725
symbol: AJE13822.1
gene_biotype: protein_coding
description:
  Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01730
symbol: AJE13823.1
gene_biotype: protein_coding
description:
  Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione.


ensembl_gene_id: CL52_01735
symbol: AJE13824.1
gene_biotype: protein_coding
description:
  Arylsulfate sulfotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01740
symbol: AJE13825.1
gene_biotype: protein_coding
description:
  Tat (twin-arginine translocation) pathway signal sequence; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01745
symbol: AJE13826.1
gene_biotype: protein_coding
description:
  2-keto-gluconate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01750
symbol: AJE13827.1
gene_biotype: protein_coding
description:
  Arsenic ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01755
symbol: AJE13828.1
gene_biotype: protein_coding
description:
  DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01760
symbol: AJE13829.1
gene_biotype: protein_coding
description:
  Carbon starvation protein CstA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01770
symbol: AJE13831.1
gene_biotype: protein_coding
description:
  Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01775
symbol: AJE13832.1
gene_biotype: protein_coding
description:
  Cation:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01780
symbol: AJE13833.1
gene_biotype: protein_coding
description:
  Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01785
symbol: AJE13834.1
gene_biotype: protein_coding
description:
  NADH:quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01790
symbol: AJE13835.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01805
symbol: AJE13837.1
gene_biotype: protein_coding
description:
  Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01815
symbol: AJE13839.1
gene_biotype: protein_coding
description:
  Curli production assembly protein CsgB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01825
symbol: AJE13841.1
gene_biotype: protein_coding
description:
  Peptide transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01835
symbol: AJE13843.1
gene_biotype: protein_coding
description:
  3-phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: CL52_01840
symbol: AJE13844.1
gene_biotype: protein_coding
description:
  FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01845
symbol: AJE13845.1
gene_biotype: protein_coding
description:
  5-carboxymethyl-2-hydroxymuconate delta-isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01860
symbol: rpiA
gene_biotype: protein_coding
description:
  Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.


ensembl_gene_id: CL52_01865
symbol: ilvA
gene_biotype: protein_coding
description:
  Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: CL52_01875
symbol: AJE13851.1
gene_biotype: protein_coding
description:
  Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01880
symbol: rppH
gene_biotype: protein_coding
description:
  RNA pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.


ensembl_gene_id: CL52_01885
symbol: AJE13853.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate-protein phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: CL52_01900
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: CL52_01905
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: CL52_01910
symbol: AJE13858.1
gene_biotype: protein_coding
description:
  ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: CL52_01920
symbol: AJE13860.1
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01925
symbol: AJE13861.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01935
symbol: AJE13863.1
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CobQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01965
symbol: AJE13869.1
gene_biotype: protein_coding
description:
  Transcriptional regulator PhoB; Two component response regulator for the phosphate regulon; PhoR phosphorylates PhoB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01970
symbol: ubiA
gene_biotype: protein_coding
description:
  4-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.


ensembl_gene_id: CL52_01975
symbol: ubiC
gene_biotype: protein_coding
description:
  Chorismate--pyruvate lyase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family.


ensembl_gene_id: CL52_01990
symbol: AJE13874.1
gene_biotype: protein_coding
description:
  Glycolate oxidase subunit GlcD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_01995
symbol: glcE
gene_biotype: protein_coding
description:
  Glycolate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02000
symbol: glcF
gene_biotype: protein_coding
description:
  Glycolate oxidase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02010
symbol: glcB
gene_biotype: protein_coding
description:
  Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.


ensembl_gene_id: CL52_02015
symbol: AJE13879.1
gene_biotype: protein_coding
description:
  Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: CL52_02020
symbol: AJE13880.1
gene_biotype: protein_coding
description:
  Rubredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02025
symbol: AJE13881.1
gene_biotype: protein_coding
description:
  Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent oxidoreductase family.


ensembl_gene_id: CL52_02030
symbol: AJE13882.1
gene_biotype: protein_coding
description:
  Integration host factor; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: CL52_02035
symbol: AJE13883.1
gene_biotype: protein_coding
description:
  Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02050
symbol: AJE13886.1
gene_biotype: protein_coding
description:
  CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CoA-transferase III family.


ensembl_gene_id: CL52_02055
symbol: AJE13887.1
gene_biotype: protein_coding
description:
  NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.


ensembl_gene_id: CL52_02065
symbol: AJE13889.1
gene_biotype: protein_coding
description:
  Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02070
symbol: AJE13890.1
gene_biotype: protein_coding
description:
  Methanol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02080
symbol: AJE13892.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family.


ensembl_gene_id: CL52_02095
symbol: AJE13895.1
gene_biotype: protein_coding
description:
  Endoribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02115
symbol: AJE13899.1
gene_biotype: protein_coding
description:
  (p)ppGpp synthetase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: CL52_02120
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: CL52_02135
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: CL52_02140
symbol: AJE13904.1
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02145
symbol: AJE13905.1
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02150
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: CL52_02165
symbol: argB
gene_biotype: protein_coding
description:
  Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: CL52_02170
symbol: AJE13910.1
gene_biotype: protein_coding
description:
  Phosphomannomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02175
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: CL52_02180
symbol: AJE13912.1
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: CL52_02185
symbol: AJE13913.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0758 family.


ensembl_gene_id: CL52_02195
symbol: AJE13915.1
gene_biotype: protein_coding
description:
  3-hydroxyacyl-CoA dehydrogenase; Converts 3-hydroxyadipyl-CoA to beta-ketoadipyl-CoA in phenylacetate degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02215
symbol: AJE13919.1
gene_biotype: protein_coding
description:
  Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02220
symbol: AJE13920.1
gene_biotype: protein_coding
description:
  FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02225
symbol: AJE13921.1
gene_biotype: protein_coding
description:
  AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02255
symbol: xpt
gene_biotype: protein_coding
description:
  Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.


ensembl_gene_id: CL52_02265
symbol: gapA
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase; Required for glycolysis; catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: CL52_02280
symbol: AJE13931.1
gene_biotype: protein_coding
description:
  Methylmalonate-semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02290
symbol: AJE13933.1
gene_biotype: protein_coding
description:
  Hemolysin III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02295
symbol: rep
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase Rep; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction.


ensembl_gene_id: CL52_02310
symbol: AJE13937.1
gene_biotype: protein_coding
description:
  Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02320
symbol: AJE13939.1
gene_biotype: protein_coding
description:
  Nitrogen regulatory protein P-II 1; Indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02325
symbol: AJE13940.1
gene_biotype: protein_coding
description:
  Ammonia channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02330
symbol: AJE13941.1
gene_biotype: protein_coding
description:
  Ammonium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02345
symbol: AJE13944.1
gene_biotype: protein_coding
description:
  HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02350
symbol: xerC
gene_biotype: protein_coding
description:
  Recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: CL52_02360
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: CL52_02365
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: CL52_02370
symbol: AJE13949.1
gene_biotype: protein_coding
description:
  Lipopeptide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02375
symbol: cyaY
gene_biotype: protein_coding
description:
  Frataxin; Involved in iron-sulfur (Fe-S) cluster assembly. May act as a regulator of Fe-S biogenesis.


ensembl_gene_id: CL52_02380
symbol: AJE13951.1
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02430
symbol: argH
gene_biotype: protein_coding
description:
  Argininosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02435
symbol: AJE13957.1
gene_biotype: protein_coding
description:
  Alginate O-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02445
symbol: hemC
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: CL52_02450
symbol: AJE13960.1
gene_biotype: protein_coding
description:
  uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: CL52_02455
symbol: AJE13961.1
gene_biotype: protein_coding
description:
  uroporphyrin-III methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02460
symbol: AJE13962.1
gene_biotype: protein_coding
description:
  Heme biosynthesis protein HemY; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02465
symbol: dsbB
gene_biotype: protein_coding
description:
  Disulfide bond formation protein DsbB; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family.


ensembl_gene_id: CL52_02470
symbol: AJE13964.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Rsd/AlgQ family.


ensembl_gene_id: CL52_02475
symbol: AJE13965.1
gene_biotype: protein_coding
description:
  Alginate regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02485
symbol: AJE13967.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02500
symbol: AJE13970.1
gene_biotype: protein_coding
description:
  Threonine transporter RhtB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02505
symbol: AJE13971.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0178 family.


ensembl_gene_id: CL52_02520
symbol: AJE13973.1
gene_biotype: protein_coding
description:
  Isoprenoid biosynthesis protein; Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate; Belongs to the peptidase C56 family.


ensembl_gene_id: CL52_02525
symbol: AJE13974.1
gene_biotype: protein_coding
description:
  Delta-aminolevulinic acid dehydratase; Catalyzes the formation of porphobilinogen from 5-aminolevulinate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ALAD family.


ensembl_gene_id: CL52_02530
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: CL52_02535
symbol: AJE13976.1
gene_biotype: protein_coding
description:
  Exopolyphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GppA/Ppx family.


ensembl_gene_id: CL52_02545
symbol: AJE13977.1
gene_biotype: protein_coding
description:
  Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thioredoxin family.


ensembl_gene_id: CL52_02550
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: CL52_02555
symbol: ubiD
gene_biotype: protein_coding
description:
  3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis.


ensembl_gene_id: CL52_02560
symbol: AJE13980.1
gene_biotype: protein_coding
description:
  CDP-6-deoxy-delta-3,4-glucoseen reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02565
symbol: AJE13981.1
gene_biotype: protein_coding
description:
  Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02570
symbol: argS
gene_biotype: protein_coding
description:
  arginyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02575
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: CL52_02585
symbol: AJE13985.1
gene_biotype: protein_coding
description:
  Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02600
symbol: AJE13987.1
gene_biotype: protein_coding
description:
  Malate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02610
symbol: AJE13989.1
gene_biotype: protein_coding
description:
  Pilus assembly protein PilM; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02615
symbol: AJE13990.1
gene_biotype: protein_coding
description:
  Pilus assembly protein PilN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02620
symbol: AJE13991.1
gene_biotype: protein_coding
description:
  Pilus assembly protein PilP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02630
symbol: AJE13993.1
gene_biotype: protein_coding
description:
  Fimbrial protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02635
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: CL52_02640
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: CL52_02650
symbol: gltB
gene_biotype: protein_coding
description:
  Catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02655
symbol: AJE13998.1
gene_biotype: protein_coding
description:
  Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02660
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: CL52_02685
symbol: AJE14004.1
gene_biotype: protein_coding
description:
  Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02690
symbol: AJE14005.1
gene_biotype: protein_coding
description:
  O-acetylhomoserine aminocarboxypropyltransferase; Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02695
symbol: AJE17346.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+; Belongs to the 'phage' integrase family.


ensembl_gene_id: CL52_02760
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase subunit sigma-70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: CL52_02765
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: CL52_02770
symbol: rpsU
gene_biotype: protein_coding
description:
  30S ribosomal protein S21; A small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS21 family.


ensembl_gene_id: CL52_02775
symbol: tsaD
gene_biotype: protein_coding
description:
  UGMP family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: CL52_02780
symbol: plsY
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: CL52_02785
symbol: AJE14014.1
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: CL52_02790
symbol: AJE14015.1
gene_biotype: protein_coding
description:
  2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02795
symbol: cca
gene_biotype: protein_coding
description:
  2', 3'-cyclic nucleotide 2'-phosphodiesterase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family. Bacterial CCA-adding enzyme type 2 subfamily.


ensembl_gene_id: CL52_02800
symbol: AJE14017.1
gene_biotype: protein_coding
description:
  SpoVR family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02805
symbol: AJE14018.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0229 family.


ensembl_gene_id: CL52_02810
symbol: AJE14019.1
gene_biotype: protein_coding
description:
  Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02815
symbol: glpE
gene_biotype: protein_coding
description:
  Sulfurtransferase; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide.


ensembl_gene_id: CL52_02820
symbol: apaH
gene_biotype: protein_coding
description:
  Diadenosine tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.


ensembl_gene_id: CL52_02825
symbol: apaG
gene_biotype: protein_coding
description:
  Magnesium transporter ApaG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02830
symbol: rsmA
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: CL52_02835
symbol: pdxA
gene_biotype: protein_coding
description:
  4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).


ensembl_gene_id: CL52_02840
symbol: surA
gene_biotype: protein_coding
description:
  Molecular chaperone SurA; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation.


ensembl_gene_id: CL52_02845
symbol: lptD
gene_biotype: protein_coding
description:
  LPS biosynthesis protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.


ensembl_gene_id: CL52_02850
symbol: AJE14027.1
gene_biotype: protein_coding
description:
  Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02855
symbol: AJE14028.1
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02860
symbol: AJE14029.1
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02870
symbol: AJE14031.1
gene_biotype: protein_coding
description:
  Ribulose-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribulose-phosphate 3-epimerase family.


ensembl_gene_id: CL52_02875
symbol: AJE14032.1
gene_biotype: protein_coding
description:
  Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.


ensembl_gene_id: CL52_02880
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]


ensembl_gene_id: CL52_02885
symbol: AJE14034.1
gene_biotype: protein_coding
description:
  Anthranilate synthase component II; TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02890
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: CL52_02895
symbol: trpC
gene_biotype: protein_coding
description:
  Indole-3-glycerol-phosphate synthase; Involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TrpC family.


ensembl_gene_id: CL52_02900
symbol: AJE14037.1
gene_biotype: protein_coding
description:
  Cyclic AMP receptor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02910
symbol: speD
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 2 subfamily.


ensembl_gene_id: CL52_02915
symbol: fieF
gene_biotype: protein_coding
description:
  Ferrous iron transporter; Member of cation diffusion facilitator family; CDF; membrane-bound; induced by both zinc and iron, but does not induce resistance to zinc; can transport zinc(II) in a proton-dependent manner; instead this protein induces iron resistance; forms dimers; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: CL52_02920
symbol: AJE14041.1
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02955
symbol: AJE14045.1
gene_biotype: protein_coding
description:
  Response regulator in two-component regulatory system with CusS; regulates the copper efflux system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02960
symbol: AJE14046.1
gene_biotype: protein_coding
description:
  Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02970
symbol: AJE14048.1
gene_biotype: protein_coding
description:
  Copper resistance protein CopB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_02980
symbol: AJE14049.1
gene_biotype: protein_coding
description:
  Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03010
symbol: AJE14054.1
gene_biotype: protein_coding
description:
  Cobalt-zinc-cadmium resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03015
symbol: AJE14055.1
gene_biotype: protein_coding
description:
  Cytochrome C peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: CL52_03020
symbol: AJE14056.1
gene_biotype: protein_coding
description:
  Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: CL52_03025
symbol: AJE14057.1
gene_biotype: protein_coding
description:
  Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03030
symbol: AJE14058.1
gene_biotype: protein_coding
description:
  protein-S-isoprenylcysteine methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03035
symbol: AJE14059.1
gene_biotype: protein_coding
description:
  DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03040
symbol: AJE14060.1
gene_biotype: protein_coding
description:
  Disulfide bond formation protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DsbB family.


ensembl_gene_id: CL52_03045
symbol: AJE14061.1
gene_biotype: protein_coding
description:
  Arsenic resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03050
symbol: AJE14062.1
gene_biotype: protein_coding
description:
  tnpA repressor protein TnpC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03060
symbol: AJE14064.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03075
symbol: AJE14066.1
gene_biotype: protein_coding
description:
  ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03085
symbol: AJE14067.1
gene_biotype: protein_coding
description:
  Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03160
symbol: AJE14077.1
gene_biotype: protein_coding
description:
  2-hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: CL52_03170
symbol: AJE14079.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03175
symbol: phnC
gene_biotype: protein_coding
description:
  Phosphonate ABC transporter ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.


ensembl_gene_id: CL52_03185
symbol: AJE14082.1
gene_biotype: protein_coding
description:
  DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03200
symbol: AJE14085.1
gene_biotype: protein_coding
description:
  Cyclic nucleotide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03210
symbol: AJE14086.1
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: CL52_03215
symbol: AJE14087.1
gene_biotype: protein_coding
description:
  Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03230
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: CL52_03235
symbol: AJE14091.1
gene_biotype: protein_coding
description:
  Geranyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: CL52_03240
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: CL52_03245
symbol: AJE14093.1
gene_biotype: protein_coding
description:
  Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03265
symbol: AJE14097.1
gene_biotype: protein_coding
description:
  Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03270
symbol: AJE14098.1
gene_biotype: protein_coding
description:
  Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03275
symbol: groEL
gene_biotype: protein_coding
description:
  Molecular chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: CL52_03280
symbol: AJE14100.1
gene_biotype: protein_coding
description:
  Poly-gamma-glutamate biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03285
symbol: AJE14101.1
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: CL52_03290
symbol: AJE14102.1
gene_biotype: protein_coding
description:
  Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03295
symbol: AJE14103.1
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03305
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: CL52_03310
symbol: AJE14106.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MtfA family.


ensembl_gene_id: CL52_03325
symbol: eutC
gene_biotype: protein_coding
description:
  Ethanolamine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the EutC family.


ensembl_gene_id: CL52_03330
symbol: AJE14108.1
gene_biotype: protein_coding
description:
  Ethanolamine ammonia-lyase; With EutC catalyzes the formation of acetaldehyde and ammonia from ethanolamine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03335
symbol: AJE14109.1
gene_biotype: protein_coding
description:
  Ethanolamine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03345
symbol: mpl
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate. Belongs to the MurCDEF family. Mpl subfamily.


ensembl_gene_id: CL52_03350
symbol: ubiX
gene_biotype: protein_coding
description:
  Aromatic acid decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: CL52_03360
symbol: ftsH
gene_biotype: protein_coding
description:
  Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: CL52_03365
symbol: queG
gene_biotype: protein_coding
description:
  Epoxyqueuosine reductase; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family.


ensembl_gene_id: CL52_03370
symbol: nnrD
gene_biotype: protein_coding
description:
  Hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epi [...]


ensembl_gene_id: CL52_03385
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: CL52_03390
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: CL52_03395
symbol: hfq
gene_biotype: protein_coding
description:
  RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: CL52_03400
symbol: hflX
gene_biotype: protein_coding
description:
  GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: CL52_03415
symbol: hisZ
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: CL52_03420
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: CL52_03435
symbol: rnr
gene_biotype: protein_coding
description:
  Exoribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: CL52_03455
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: CL52_03470
symbol: AJE14134.1
gene_biotype: protein_coding
description:
  DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: CL52_03475
symbol: alr
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: CL52_03480
symbol: AJE14136.1
gene_biotype: protein_coding
description:
  DeoR faimly transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03505
symbol: AJE14141.1
gene_biotype: protein_coding
description:
  Type 4 fimbriae expression regulatory protein PilR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03520
symbol: bamD
gene_biotype: protein_coding
description:
  DNA transporter; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: CL52_03525
symbol: AJE14145.1
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: CL52_03530
symbol: AJE14146.1
gene_biotype: protein_coding
description:
  Laccase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the multicopper oxidase YfiH/RL5 family.


ensembl_gene_id: CL52_03535
symbol: clpB
gene_biotype: protein_coding
description:
  Protein disaggregation chaperone; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: CL52_03565
symbol: AJE14149.1
gene_biotype: protein_coding
description:
  Thymidine phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03570
symbol: AJE14150.1
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide pyrophosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NadC/ModD family.


ensembl_gene_id: CL52_03575
symbol: AJE14151.1
gene_biotype: protein_coding
description:
  Cytochrome D ubiquinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03585
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophan--tRNA ligase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: CL52_03600
symbol: nfi
gene_biotype: protein_coding
description:
  Endonuclease V; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA.


ensembl_gene_id: CL52_03605
symbol: AJE14157.1
gene_biotype: protein_coding
description:
  N-acetyl-anhydromuranmyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03625
symbol: AJE14161.1
gene_biotype: protein_coding
description:
  Hydrolase TatD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03650
symbol: AJE14166.1
gene_biotype: protein_coding
description:
  palmitoyl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03660
symbol: AJE14168.1
gene_biotype: protein_coding
description:
  Metallopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03665
symbol: AJE14169.1
gene_biotype: protein_coding
description:
  Metal-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03675
symbol: AJE14171.1
gene_biotype: protein_coding
description:
  DnrE protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03680
symbol: AJE14172.1
gene_biotype: protein_coding
description:
  Two-component response regulator NarL; phosphorylated by NarQ; activates transcription of nitrate and nitrite reductase genes and represses transcription of fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03695
symbol: AJE14175.1
gene_biotype: protein_coding
description:
  Nitrate/nitrite transporter NarK; Involved in the transport of nitrate and nitrite; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03700
symbol: narZ
gene_biotype: protein_coding
description:
  Nitrate reductase; With NarYV catalyzes the reduction of nitrate; the beta subunit is an iron sulfur cluster containing electron transfer subunit; one of 3 nitrate reductases in E. coli; expression of nitrate reductase Z is not dependent on nitrate levels; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: CL52_03705
symbol: narH
gene_biotype: protein_coding
description:
  Nitrate reductase; With NarGJI catalyzes the reduction of nitrate; the beta subunit is an iron sulfur cluster containing electron transfer subunit; one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03710
symbol: AJE14178.1
gene_biotype: protein_coding
description:
  Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03720
symbol: AJE14180.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03725
symbol: moaA
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: CL52_03730
symbol: AJE14182.1
gene_biotype: protein_coding
description:
  Molybdopterin biosynthesis protein B; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.


ensembl_gene_id: CL52_03735
symbol: AJE14183.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoaA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: CL52_03765
symbol: AJE14189.1
gene_biotype: protein_coding
description:
  Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03770
symbol: AJE14190.1
gene_biotype: protein_coding
description:
  Long-chain acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03795
symbol: AJE14195.1
gene_biotype: protein_coding
description:
  Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03800
symbol: AJE14196.1
gene_biotype: protein_coding
description:
  Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03815
symbol: AJE14199.1
gene_biotype: protein_coding
description:
  SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03820
symbol: AJE14200.1
gene_biotype: protein_coding
description:
  InaA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03825
symbol: AJE14201.1
gene_biotype: protein_coding
description:
  Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.


ensembl_gene_id: CL52_03850
symbol: AJE14206.1
gene_biotype: protein_coding
description:
  Ferredoxin:oxidoreductase FAD/NAD(P)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03865
symbol: AJE14209.1
gene_biotype: protein_coding
description:
  Feruloyl esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03870
symbol: AJE14210.1
gene_biotype: protein_coding
description:
  GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03880
symbol: trmA
gene_biotype: protein_coding
description:
  tRNA (uracil-5-)-methyltransferase; Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA).


ensembl_gene_id: CL52_03885
symbol: AJE14213.1
gene_biotype: protein_coding
description:
  Guanine permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03890
symbol: AJE14214.1
gene_biotype: protein_coding
description:
  RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03895
symbol: AJE14215.1
gene_biotype: protein_coding
description:
  Multidrug transporter AcrB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: CL52_03900
symbol: AJE14216.1
gene_biotype: protein_coding
description:
  RND transporter MFP subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: CL52_03905
symbol: AJE14217.1
gene_biotype: protein_coding
description:
  Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03915
symbol: AJE14219.1
gene_biotype: protein_coding
description:
  (2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03920
symbol: AJE14220.1
gene_biotype: protein_coding
description:
  FAD-binding molybdopterin dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03925
symbol: AJE14221.1
gene_biotype: protein_coding
description:
  Aldehyde oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03935
symbol: AJE14223.1
gene_biotype: protein_coding
description:
  4-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03940
symbol: AJE14224.1
gene_biotype: protein_coding
description:
  MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03945
symbol: rlmG
gene_biotype: protein_coding
description:
  50S rRNA methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA.


ensembl_gene_id: CL52_03950
symbol: AJE14226.1
gene_biotype: protein_coding
description:
  ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_03955
symbol: AJE14227.1
gene_biotype: protein_coding
description:
  Converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: CL52_03985
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: CL52_03995
symbol: AJE14235.1
gene_biotype: protein_coding
description:
  Pilus assembly protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein.


ensembl_gene_id: CL52_04000
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: CL52_04005
symbol: AJE14237.1
gene_biotype: protein_coding
description:
  Copper transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04015
symbol: mscL
gene_biotype: protein_coding
description:
  Large-conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: CL52_04020
symbol: AJE14240.1
gene_biotype: protein_coding
description:
  Cytochrome C peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04025
symbol: AJE14241.1
gene_biotype: protein_coding
description:
  ATP-dependent protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04055
symbol: AJE14247.1
gene_biotype: protein_coding
description:
  Octaprenyl-diphosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: CL52_04060
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: CL52_04065
symbol: rpmA
gene_biotype: protein_coding
description:
  50S ribosomal protein L27; Involved in the peptidyltransferase reaction during translation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL27 family.


ensembl_gene_id: CL52_04070
symbol: obgE
gene_biotype: protein_coding
description:
  GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: CL52_04075
symbol: proB
gene_biotype: protein_coding
description:
  Gamma-glutamyl kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: CL52_04090
symbol: murJ
gene_biotype: protein_coding
description:
  Membrane protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: CL52_04095
symbol: AJE14255.1
gene_biotype: protein_coding
description:
  FMN adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribF family.


ensembl_gene_id: CL52_04100
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: CL52_04105
symbol: lspA
gene_biotype: protein_coding
description:
  Peptidase A8; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: CL52_04110
symbol: AJE14258.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; Rotamase; accelerates isomerization of the peptidyl prolyl bond, involved in the folding of proteases; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04115
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: CL52_04125
symbol: AJE14260.1
gene_biotype: protein_coding
description:
  Pilus assembly protein PilV; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04130
symbol: AJE14261.1
gene_biotype: protein_coding
description:
  Pilus assembly protein PilW; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04135
symbol: AJE14262.1
gene_biotype: protein_coding
description:
  Pilus assembly protein PilX; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04140
symbol: AJE14263.1
gene_biotype: protein_coding
description:
  Pilus assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04150
symbol: AJE14265.1
gene_biotype: protein_coding
description:
  D-amino acid oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04155
symbol: AJE14266.1
gene_biotype: protein_coding
description:
  Translation initiation factor Sui1; Involved in start site selection during the initiation of translation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04200
symbol: cmoM
gene_biotype: protein_coding
description:
  SAM-dependent methyltransferase; Catalyzes the methylation of 5-carboxymethoxyuridine (cmo5U) to form 5-methoxycarbonylmethoxyuridine (mcmo5U) at position 34 in tRNAs; Belongs to the class I-like SAM-binding methyltransferase superfamily. CmoM family.


ensembl_gene_id: CL52_04205
symbol: AJE14276.1
gene_biotype: protein_coding
description:
  Pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04215
symbol: AJE14278.1
gene_biotype: protein_coding
description:
  PTS fructose transporter subunit IIA; Phosphoenolpyruvate (PEP)-dependent, sugar transporting phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; the phosphoenolpyruvate-protein phosphotransferase transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein HPr; HPr transfers the phosphoryl group to subunit A; subunit IIA transfers a phosphoryl group to subunit IIB; subunit IIB transfers the phosphoryl group to the substrate; part of the phosphoenolpyruvat [...]


ensembl_gene_id: CL52_04220
symbol: AJE14279.1
gene_biotype: protein_coding
description:
  1-phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: CL52_04230
symbol: AJE14281.1
gene_biotype: protein_coding
description:
  Quinoprotein glucose dehydrogenase; catalyzes the formation of D-glucono-1,5-lactone from D-glucose and ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04245
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: CL52_04250
symbol: AJE14285.1
gene_biotype: protein_coding
description:
  Ornithine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Orn/Lys/Arg decarboxylase class-II family.


ensembl_gene_id: CL52_04260
symbol: AJE14287.1
gene_biotype: protein_coding
description:
  Fe(II)-dependent oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04265
symbol: AJE14288.1
gene_biotype: protein_coding
description:
  Ligand-gated channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04270
symbol: AJE14289.1
gene_biotype: protein_coding
description:
  DnrP protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04275
symbol: AJE14290.1
gene_biotype: protein_coding
description:
  Transcription factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04280
symbol: AJE14291.1
gene_biotype: protein_coding
description:
  DnrO protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04285
symbol: AJE14292.1
gene_biotype: protein_coding
description:
  Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.


ensembl_gene_id: CL52_04290
symbol: AJE14293.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04295
symbol: AJE14294.1
gene_biotype: protein_coding
description:
  Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04300
symbol: AJE14295.1
gene_biotype: protein_coding
description:
  Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04310
symbol: AJE14297.1
gene_biotype: protein_coding
description:
  Lipid carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04315
symbol: AJE14298.1
gene_biotype: protein_coding
description:
  Zinc-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04325
symbol: AJE14300.1
gene_biotype: protein_coding
description:
  Ribonucleoside-triphosphate reductase; Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04345
symbol: AJE14304.1
gene_biotype: protein_coding
description:
  FTR1 family iron permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04350
symbol: AJE14305.1
gene_biotype: protein_coding
description:
  Iron transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04360
symbol: AJE14307.1
gene_biotype: protein_coding
description:
  EmrB/QacA subfamily drug resistance transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.


ensembl_gene_id: CL52_04370
symbol: AJE14309.1
gene_biotype: protein_coding
description:
  Molecular chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04385
symbol: AJE14312.1
gene_biotype: protein_coding
description:
  Nitric oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: CL52_04395
symbol: bamE
gene_biotype: protein_coding
description:
  Membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: CL52_04400
symbol: fur
gene_biotype: protein_coding
description:
  Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family.


ensembl_gene_id: CL52_04410
symbol: grpE
gene_biotype: protein_coding
description:
  Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...]


ensembl_gene_id: CL52_04420
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: CL52_04425
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: CL52_04430
symbol: carA
gene_biotype: protein_coding
description:
  Carbamoyl phosphate synthase small subunit; Catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04435
symbol: carB
gene_biotype: protein_coding
description:
  Carbamoyl phosphate synthase large subunit; Four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04440
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: CL52_04450
symbol: AJE14325.1
gene_biotype: protein_coding
description:
  RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04455
symbol: rlmE
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.


ensembl_gene_id: CL52_04460
symbol: hflB
gene_biotype: protein_coding
description:
  ATP-dependent metalloprotease; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: CL52_04465
symbol: folP
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: CL52_04470
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: CL52_04475
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: CL52_04480
symbol: AJE14331.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04495
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation protein RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: CL52_04500
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription elongation factor NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: CL52_04505
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: CL52_04510
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: CL52_04515
symbol: truB
gene_biotype: protein_coding
description:
  Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: CL52_04520
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: CL52_04525
symbol: pnp
gene_biotype: protein_coding
description:
  Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: CL52_04555
symbol: pgi
gene_biotype: protein_coding
description:
  Glucose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GPI family.


ensembl_gene_id: CL52_04560
symbol: panD
gene_biotype: protein_coding
description:
  Aspartate decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: CL52_04565
symbol: panC
gene_biotype: protein_coding
description:
  Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: CL52_04570
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: CL52_04580
symbol: pcnB
gene_biotype: protein_coding
description:
  poly(A) polymerase; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: CL52_04600
symbol: gluQ
gene_biotype: protein_coding
description:
  glutamyl-Q tRNA(Asp) ligase; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily.


ensembl_gene_id: CL52_04605
symbol: dksA
gene_biotype: protein_coding
description:
  Molecular chaperone DnaK; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression.


ensembl_gene_id: CL52_04615
symbol: sfsA
gene_biotype: protein_coding
description:
  XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SfsA family.


ensembl_gene_id: CL52_04620
symbol: AJE14356.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.


ensembl_gene_id: CL52_04655
symbol: purD
gene_biotype: protein_coding
description:
  Phosphoribosylamine--glycine ligase; Catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GARS family.


ensembl_gene_id: CL52_04660
symbol: purH
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazolecarboxamide formyltransferase; Involved in de novo purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04665
symbol: AJE14363.1
gene_biotype: protein_coding
description:
  Fis family transcriptional regulator; Activates ribosomal RNA transcription. Plays a direct role in upstream activation of rRNA promoters; Belongs to the transcriptional regulatory Fis family.


ensembl_gene_id: CL52_04670
symbol: dusB
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the Dus family. DusB subfamily.


ensembl_gene_id: CL52_04680
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: CL52_04685
symbol: AJE14367.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: CL52_04695
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: CL52_04700
symbol: dsbD
gene_biotype: protein_coding
description:
  Thiol:disulfide interchange protein; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily.


ensembl_gene_id: CL52_04710
symbol: AJE14372.1
gene_biotype: protein_coding
description:
  iron(III) ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04715
symbol: AJE14373.1
gene_biotype: protein_coding
description:
  cAMP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04720
symbol: AJE14374.1
gene_biotype: protein_coding
description:
  Competence protein TfoX; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04735
symbol: AJE14377.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits).


ensembl_gene_id: CL52_04745
symbol: AJE14379.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04750
symbol: AJE14380.1
gene_biotype: protein_coding
description:
  Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04755
symbol: AJE14381.1
gene_biotype: protein_coding
description:
  Acetolactate synthase 3 catalytic subunit; Catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04760
symbol: ilvH
gene_biotype: protein_coding
description:
  Acetolactate synthase 3 regulatory subunit; With IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04765
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: CL52_04770
symbol: AJE14384.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--serine O-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: CL52_04775
symbol: AJE14385.1
gene_biotype: protein_coding
description:
  Sulfoxide reductase catalytic subunit YedY; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04780
symbol: msrQ
gene_biotype: protein_coding
description:
  Sulfite oxidase; Part of the MsrPQ system that repairs oxidized periplasmic proteins containing methionine sulfoxide residues (Met-O), using respiratory chain electrons. Thus protects these proteins from oxidative-stress damage caused by reactive species of oxygen and chlorine generated by the host defense mechanisms. MsrPQ is essential for the maintenance of envelope integrity under bleach stress, rescuing a wide series of structurally unrelated periplasmic proteins from methionine oxidation. MsrQ provides electrons for reduction to the reductase catalytic subunit MsrP, using the quin [...]


ensembl_gene_id: CL52_04810
symbol: AJE14387.1
gene_biotype: protein_coding
description:
  Paraquat-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04820
symbol: AJE14389.1
gene_biotype: protein_coding
description:
  Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04825
symbol: AJE14390.1
gene_biotype: protein_coding
description:
  Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04830
symbol: AJE14391.1
gene_biotype: protein_coding
description:
  Chromosome partitioning protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04840
symbol: AJE14393.1
gene_biotype: protein_coding
description:
  Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily.


ensembl_gene_id: CL52_04845
symbol: AJE14394.1
gene_biotype: protein_coding
description:
  Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04850
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: CL52_04855
symbol: AJE14396.1
gene_biotype: protein_coding
description:
  Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04875
symbol: AJE14400.1
gene_biotype: protein_coding
description:
  Trehalose-6-phosphate synthase; Probably involved in the osmoprotection via the biosynthesis of trehalose. Catalyzes the transfer of glucose from UDP-alpha-D- glucose (UDP-Glc) to D-glucose 6-phosphate (Glc-6-P) to form trehalose- 6-phosphate. Acts with retention of the anomeric configuration of the UDP-sugar donor; Belongs to the glycosyltransferase 20 family.


ensembl_gene_id: CL52_04880
symbol: AJE14401.1
gene_biotype: protein_coding
description:
  Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.


ensembl_gene_id: CL52_04895
symbol: vapC
gene_biotype: protein_coding
description:
  Plasmid stabilization protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.


ensembl_gene_id: CL52_04900
symbol: AJE14404.1
gene_biotype: protein_coding
description:
  Plasmid stabilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04915
symbol: AJE14407.1
gene_biotype: protein_coding
description:
  acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: CL52_04920
symbol: AJE14408.1
gene_biotype: protein_coding
description:
  hydroxymethylglutaryl-CoA lyase; Catalyzes the formation of acetoacetate and acetyl-CoA from 3-hydroxy-3-methylglutaryl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04925
symbol: AJE14409.1
gene_biotype: protein_coding
description:
  3-methylcrotonyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04930
symbol: AJE14410.1
gene_biotype: protein_coding
description:
  Catalyzes the hydration of gamma-carboxygeranoyl-CoA to 3-hydroxy-gamma-carboxygeranoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04935
symbol: AJE14411.1
gene_biotype: protein_coding
description:
  methylcrotonoyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04940
symbol: AJE14412.1
gene_biotype: protein_coding
description:
  isovaleryl-CoA dehydrogenase; Catalyzes the formation of 3-methylbut-2-enoyl CoA from 3-methylbutanoyl CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04945
symbol: AJE14413.1
gene_biotype: protein_coding
description:
  UV damage repair endonuclease UvdE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_04975
symbol: lnt
gene_biotype: protein_coding
description:
  Acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: CL52_04980
symbol: lspA-2
gene_biotype: protein_coding
description:
  Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: CL52_05040
symbol: AJE14431.1
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05045
symbol: AJE14432.1
gene_biotype: protein_coding
description:
  Restriction endonuclease subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05050
symbol: AJE14433.1
gene_biotype: protein_coding
description:
  Restriction endonuclease subunit S; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05055
symbol: AJE14434.1
gene_biotype: protein_coding
description:
  Toxin Fic; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05060
symbol: AJE14435.1
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase; Subunit R is required for both nuclease and ATPase activities, but not for modification.


ensembl_gene_id: CL52_05065
symbol: AJE14436.1
gene_biotype: protein_coding
description:
  NTPase KAP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05095
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: CL52_05100
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: CL52_05105
symbol: rplY
gene_biotype: protein_coding
description:
  50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: CL52_05110
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: CL52_05125
symbol: ispE
gene_biotype: protein_coding
description:
  Kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: CL52_05130
symbol: lolB
gene_biotype: protein_coding
description:
  Membrane protein; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.


ensembl_gene_id: CL52_05140
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: CL52_05145
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: CL52_05150
symbol: prmC
gene_biotype: protein_coding
description:
  SAM-dependent methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: CL52_05155
symbol: AJE14450.1
gene_biotype: protein_coding
description:
  Molybdopterin-synthase adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05165
symbol: AJE14452.1
gene_biotype: protein_coding
description:
  Lipid A 3-O-deacylase; Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety; Belongs to the PagL family.


ensembl_gene_id: CL52_05170
symbol: AJE14453.1
gene_biotype: protein_coding
description:
  Uracil transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05175
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: CL52_05180
symbol: AJE14455.1
gene_biotype: protein_coding
description:
  Hypoxanthine-guanine phosphoribosyltransferase; Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05195
symbol: AJE14458.1
gene_biotype: protein_coding
description:
  LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05210
symbol: AJE14461.1
gene_biotype: protein_coding
description:
  Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05220
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family.


ensembl_gene_id: CL52_05225
symbol: argJ
gene_biotype: protein_coding
description:
  Ornithine acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: CL52_05235
symbol: AJE14466.1
gene_biotype: protein_coding
description:
  Alkyl hydroperoxide reductase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.


ensembl_gene_id: CL52_05245
symbol: AJE14468.1
gene_biotype: protein_coding
description:
  Biotin carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05255
symbol: AJE14470.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05260
symbol: AJE14471.1
gene_biotype: protein_coding
description:
  ATP--cobalamin adenosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Cob(I)alamin adenosyltransferase family.


ensembl_gene_id: CL52_05270
symbol: AJE14473.1
gene_biotype: protein_coding
description:
  2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.


ensembl_gene_id: CL52_05280
symbol: AJE14475.1
gene_biotype: protein_coding
description:
  Nucleotide-binding protein; Nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0234 family.


ensembl_gene_id: CL52_05285
symbol: AJE14476.1
gene_biotype: protein_coding
description:
  Mechanosensitive ion channel protein MscS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05295
symbol: AJE14478.1
gene_biotype: protein_coding
description:
  DNA base-flipping protein YbaZ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05305
symbol: fabG
gene_biotype: protein_coding
description:
  3-ketoacyl-ACP reductase; Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05310
symbol: AJE14481.1
gene_biotype: protein_coding
description:
  Heme iron utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05315
symbol: AJE14482.1
gene_biotype: protein_coding
description:
  Exclusion suppressor FxsA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05320
symbol: groS
gene_biotype: protein_coding
description:
  Molecular chaperone GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: CL52_05345
symbol: AJE14488.1
gene_biotype: protein_coding
description:
  Imelysin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05350
symbol: AJE14489.1
gene_biotype: protein_coding
description:
  Thiol oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05360
symbol: AJE14491.1
gene_biotype: protein_coding
description:
  LemA family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05375
symbol: AJE14494.1
gene_biotype: protein_coding
description:
  Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: CL52_05380
symbol: AJE14495.1
gene_biotype: protein_coding
description:
  Amino acid transporter LysE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05405
symbol: pncB
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.


ensembl_gene_id: CL52_05410
symbol: AJE14501.1
gene_biotype: protein_coding
description:
  General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05420
symbol: AJE14503.1
gene_biotype: protein_coding
description:
  Dienelactone hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05435
symbol: AJE14506.1
gene_biotype: protein_coding
description:
  Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily.


ensembl_gene_id: CL52_05455
symbol: AJE14508.1
gene_biotype: protein_coding
description:
  Hydroxypyruvate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05460
symbol: AJE14509.1
gene_biotype: protein_coding
description:
  Tartronate semialdehyde reductase; NADH-dependent; catalyzed the reversible formation of glycerate from tartronate semialdehyde; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05465
symbol: AJE14510.1
gene_biotype: protein_coding
description:
  Hydroxypyruvate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the hyi family.


ensembl_gene_id: CL52_05470
symbol: AJE14511.1
gene_biotype: protein_coding
description:
  Glyoxylate carboligase; Catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.


ensembl_gene_id: CL52_05480
symbol: AJE14513.1
gene_biotype: protein_coding
description:
  Hydroxyisourate hydrolase; Catalyzes the formation of 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline from 5-hydroxyisourate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.


ensembl_gene_id: CL52_05505
symbol: AJE14518.1
gene_biotype: protein_coding
description:
  Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05525
symbol: AJE14522.1
gene_biotype: protein_coding
description:
  Sodium:proton exchanger; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: CL52_05530
symbol: AJE14523.1
gene_biotype: protein_coding
description:
  Carbonate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05540
symbol: allA
gene_biotype: protein_coding
description:
  Ureidoglycolate hydrolase; Catalyzes the catabolism of the allantoin degradation intermediate (S)-ureidoglycolate, generating urea and glyoxylate. Involved in the utilization of allantoin as nitrogen source.


ensembl_gene_id: CL52_05545
symbol: alc
gene_biotype: protein_coding
description:
  Allantoicase; Catalyzes the formation of S-ureidoglycolate and urea from allantoate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the allantoicase family.


ensembl_gene_id: CL52_05550
symbol: AJE14527.1
gene_biotype: protein_coding
description:
  OHCU decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05555
symbol: AJE14528.1
gene_biotype: protein_coding
description:
  Allantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05560
symbol: AJE14529.1
gene_biotype: protein_coding
description:
  5-hydroxyisourate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.


ensembl_gene_id: CL52_05580
symbol: AJE14533.1
gene_biotype: protein_coding
description:
  Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.


ensembl_gene_id: CL52_05585
symbol: AJE14534.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor sulfurylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05590
symbol: AJE14535.1
gene_biotype: protein_coding
description:
  Xanthine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05605
symbol: AJE14538.1
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05610
symbol: AJE14539.1
gene_biotype: protein_coding
description:
  8-oxoguanine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05625
symbol: AJE14542.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: CL52_05665
symbol: AJE14550.1
gene_biotype: protein_coding
description:
  Isochorismate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05670
symbol: entE
gene_biotype: protein_coding
description:
  Enterobactin synthase subunit E; Bifunctional 2,3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase; activates the carboxylate group of 2,3-dihydroxy-benzoate forming (2,3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2,3-dihydroxy-benzoate adenylate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05675
symbol: AJE14552.1
gene_biotype: protein_coding
description:
  Isochorismatase; 2,3 dihydro-2,3 dihydroxybenzoate synthase; catalyzes the formation of 2,3 dihydro-2,3 dihydroxybenzoate and pyruvate from isochorismate; with Ent DEF is involved in enterobactin synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05680
symbol: AJE14553.1
gene_biotype: protein_coding
description:
  Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05685
symbol: AJE14554.1
gene_biotype: protein_coding
description:
  2,3-dihydroxybenzoate-2,3-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05690
symbol: AJE14555.1
gene_biotype: protein_coding
description:
  Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: CL52_05730
symbol: AJE14561.1
gene_biotype: protein_coding
description:
  Iron-siderophore ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05735
symbol: AJE14562.1
gene_biotype: protein_coding
description:
  Permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: CL52_05755
symbol: AJE14566.1
gene_biotype: protein_coding
description:
  Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methyltransferase superfamily.


ensembl_gene_id: CL52_05760
symbol: AJE14567.1
gene_biotype: protein_coding
description:
  ATP-dependent Zn protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05790
symbol: AJE14573.1
gene_biotype: protein_coding
description:
  Curli production assembly/transport protein CsgG; Involved in the stability of the curlin proteins during assembly; involved in the secretion of the major curlin subunit CsgA across the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05795
symbol: AJE14574.1
gene_biotype: protein_coding
description:
  Curli production assembly protein CsgF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05800
symbol: AJE14575.1
gene_biotype: protein_coding
description:
  Curli production assembly protein CsgE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05825
symbol: AJE14580.1
gene_biotype: protein_coding
description:
  XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: CL52_05830
symbol: metE
gene_biotype: protein_coding
description:
  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.


ensembl_gene_id: CL52_05835
symbol: glpD
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; In Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05840
symbol: AJE14583.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.


ensembl_gene_id: CL52_05845
symbol: mltF
gene_biotype: protein_coding
description:
  Murein transglycosylase; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella.


ensembl_gene_id: CL52_05850
symbol: AJE14585.1
gene_biotype: protein_coding
description:
  GIY-YIG nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05855
symbol: AJE14586.1
gene_biotype: protein_coding
description:
  Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05870
symbol: AJE14589.1
gene_biotype: protein_coding
description:
  Nucleoid-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05900
symbol: AJE14594.1
gene_biotype: protein_coding
description:
  Citrate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05915
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: CL52_05925
symbol: AJE14599.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05930
symbol: pepA
gene_biotype: protein_coding
description:
  Cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: CL52_05950
symbol: AJE14604.1
gene_biotype: protein_coding
description:
  Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_05960
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine tRNA ribosyltransferase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: CL52_05965
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: CL52_05970
symbol: yajC
gene_biotype: protein_coding
description:
  Preprotein translocase subunit YajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: CL52_05975
symbol: secD
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: CL52_05980
symbol: secF
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: CL52_05990
symbol: AJE14611.1
gene_biotype: protein_coding
description:
  Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the inositol monophosphatase superfamily.


ensembl_gene_id: CL52_05995
symbol: trmJ
gene_biotype: protein_coding
description:
  RNA methyltransferase; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: CL52_06000
symbol: AJE14613.1
gene_biotype: protein_coding
description:
  Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06005
symbol: AJE14614.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins.


ensembl_gene_id: CL52_06010
symbol: iscS
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins.


ensembl_gene_id: CL52_06015
symbol: AJE14616.1
gene_biotype: protein_coding
description:
  Scaffolding protein; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.


ensembl_gene_id: CL52_06020
symbol: iscA
gene_biotype: protein_coding
description:
  Iron-sulfur cluster assembly protein; Is able to transfer iron-sulfur clusters to apo-ferredoxin. Multiple cycles of [2Fe2S] cluster formation and transfer are observed, suggesting that IscA acts catalytically. Recruits intracellular free iron so as to provide iron for the assembly of transient iron-sulfur cluster in IscU in the presence of IscS, L-cysteine and the thioredoxin reductase system; Belongs to the HesB/IscA family.


ensembl_gene_id: CL52_06025
symbol: hscB
gene_biotype: protein_coding
description:
  Co-chaperone HscB; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family.


ensembl_gene_id: CL52_06030
symbol: hscA
gene_biotype: protein_coding
description:
  Chaperone protein HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB.


ensembl_gene_id: CL52_06035
symbol: AJE14620.1
gene_biotype: protein_coding
description:
  2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06045
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: CL52_06050
symbol: rlmN
gene_biotype: protein_coding
description:
  50S rRNA methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: CL52_06060
symbol: AJE14625.1
gene_biotype: protein_coding
description:
  Cro/Cl family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06065
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: CL52_06075
symbol: AJE14628.1
gene_biotype: protein_coding
description:
  GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06080
symbol: bamB
gene_biotype: protein_coding
description:
  Dehydrogenase; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: CL52_06085
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: CL52_06095
symbol: AJE14632.1
gene_biotype: protein_coding
description:
  Carbon-nitrogen hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06115
symbol: AJE14636.1
gene_biotype: protein_coding
description:
  Deoxyribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06125
symbol: AJE14638.1
gene_biotype: protein_coding
description:
  Hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06130
symbol: leuA-2
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.


ensembl_gene_id: CL52_06160
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: CL52_06165
symbol: AJE14646.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06170
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: CL52_06185
symbol: tadA
gene_biotype: protein_coding
description:
  Zinc-binding protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: CL52_06190
symbol: AJE14651.1
gene_biotype: protein_coding
description:
  Iron ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: CL52_06195
symbol: AJE14652.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: CL52_06200
symbol: AJE14653.1
gene_biotype: protein_coding
description:
  Glutaredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaredoxin family. Monothiol subfamily.


ensembl_gene_id: CL52_06205
symbol: AJE14654.1
gene_biotype: protein_coding
description:
  Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.


ensembl_gene_id: CL52_06225
symbol: AJE14656.1
gene_biotype: protein_coding
description:
  ssDNA exonuclease RecJ; 5'-3' single-stranded-DNA-specific exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06230
symbol: AJE14657.1
gene_biotype: protein_coding
description:
  Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06245
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: CL52_06250
symbol: lysS
gene_biotype: protein_coding
description:
  lysyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: CL52_06260
symbol: AJE14663.1
gene_biotype: protein_coding
description:
  Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BI1 family.


ensembl_gene_id: CL52_06290
symbol: AJE14669.1
gene_biotype: protein_coding
description:
  Pilin assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06295
symbol: ppc
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.


ensembl_gene_id: CL52_06300
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: CL52_06305
symbol: AJE14672.1
gene_biotype: protein_coding
description:
  Peptidase M22; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06320
symbol: AJE14675.1
gene_biotype: protein_coding
description:
  Extensin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06325
symbol: rsmJ
gene_biotype: protein_coding
description:
  SAM-dependent methyltransferase; Specifically methylates the guanosine in position 1516 of 16S rRNA.


ensembl_gene_id: CL52_06335
symbol: AJE14677.1
gene_biotype: protein_coding
description:
  RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: CL52_06350
symbol: AJE14680.1
gene_biotype: protein_coding
description:
  Zn-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06355
symbol: AJE14681.1
gene_biotype: protein_coding
description:
  Phenazine biosynthesis protein PhzF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06365
symbol: AJE14683.1
gene_biotype: protein_coding
description:
  Pirin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pirin family.


ensembl_gene_id: CL52_06370
symbol: AJE14684.1
gene_biotype: protein_coding
description:
  NAD(P)H:quinone oxidoreductase; Catalyzes the transfer of electrons from NADH to ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06375
symbol: AJE14685.1
gene_biotype: protein_coding
description:
  Cystathionine gamma-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06410
symbol: AJE14692.1
gene_biotype: protein_coding
description:
  Copper ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06450
symbol: AJE14700.1
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.


ensembl_gene_id: CL52_06460
symbol: plsB
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GPAT/DAPAT family.


ensembl_gene_id: CL52_06475
symbol: AJE14705.1
gene_biotype: protein_coding
description:
  Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06480
symbol: AJE14706.1
gene_biotype: protein_coding
description:
  GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06515
symbol: AJE14712.1
gene_biotype: protein_coding
description:
  SAM-dependent methlyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06520
symbol: dapE
gene_biotype: protein_coding
description:
  Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.


ensembl_gene_id: CL52_06525
symbol: AJE14714.1
gene_biotype: protein_coding
description:
  Beta-(1-3)-glucosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06530
symbol: AJE14715.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06555
symbol: AJE14720.1
gene_biotype: protein_coding
description:
  Cytochrome C; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.


ensembl_gene_id: CL52_06560
symbol: napA
gene_biotype: protein_coding
description:
  Nitrate reductase; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.


ensembl_gene_id: CL52_06565
symbol: napD
gene_biotype: protein_coding
description:
  Glutamate synthase; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.


ensembl_gene_id: CL52_06580
symbol: AJE14725.1
gene_biotype: protein_coding
description:
  sprT; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SprT family.


ensembl_gene_id: CL52_06600
symbol: ttcA
gene_biotype: protein_coding
description:
  tRNA 2-thiocytidine biosynthesis protein TtcA; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.


ensembl_gene_id: CL52_06610
symbol: AJE14730.1
gene_biotype: protein_coding
description:
  Phospho-2-dehydro-3-deoxyheptonate aldolase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).


ensembl_gene_id: CL52_06635
symbol: AJE14735.1
gene_biotype: protein_coding
description:
  Cytochrome d terminal oxidase subunit 1; Part of the aerobic respiratory chain; catalyzes the ubiquinol to ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06640
symbol: AJE14736.1
gene_biotype: protein_coding
description:
  Cytochrome d ubiquinol oxidase subunit 2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06655
symbol: AJE14739.1
gene_biotype: protein_coding
description:
  Peptidase P60; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06660
symbol: AJE14740.1
gene_biotype: protein_coding
description:
  Hydrolase Nlp/P60; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06665
symbol: AJE14741.1
gene_biotype: protein_coding
description:
  DNA repair exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06670
symbol: modC
gene_biotype: protein_coding
description:
  Molybdenum ABC transporter ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family.


ensembl_gene_id: CL52_06675
symbol: AJE14743.1
gene_biotype: protein_coding
description:
  Molybdenum ABC transporter permease; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: CL52_06680
symbol: AJE14744.1
gene_biotype: protein_coding
description:
  Molybdate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06685
symbol: AJE14745.1
gene_biotype: protein_coding
description:
  ModE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06690
symbol: AJE14746.1
gene_biotype: protein_coding
description:
  Glutathione peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutathione peroxidase family.


ensembl_gene_id: CL52_06695
symbol: AJE14747.1
gene_biotype: protein_coding
description:
  Long-chain fatty acid transport protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06700
symbol: AJE14748.1
gene_biotype: protein_coding
description:
  3-mercaptopyruvate sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06705
symbol: rnd
gene_biotype: protein_coding
description:
  Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family.


ensembl_gene_id: CL52_06720
symbol: AJE14752.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0260 family.


ensembl_gene_id: CL52_06730
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: CL52_06735
symbol: AJE14755.1
gene_biotype: protein_coding
description:
  Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family.


ensembl_gene_id: CL52_06740
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s).


ensembl_gene_id: CL52_06795
symbol: AJE14762.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06800
symbol: AJE14763.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis anti-sigma factor FlgM; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06805
symbol: AJE14764.1
gene_biotype: protein_coding
description:
  Flagellar basal body P-ring biosynthesis protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.


ensembl_gene_id: CL52_06810
symbol: AJE14765.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06820
symbol: flgB
gene_biotype: protein_coding
description:
  Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: CL52_06825
symbol: AJE14768.1
gene_biotype: protein_coding
description:
  Flagellar basal body rod protein FlgC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: CL52_06830
symbol: AJE14769.1
gene_biotype: protein_coding
description:
  Flagellar basal body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.


ensembl_gene_id: CL52_06835
symbol: AJE14770.1
gene_biotype: protein_coding
description:
  Flagellar hook protein FlgE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06840
symbol: flgF
gene_biotype: protein_coding
description:
  Flagellar basal body rod protein FlgF; FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06845
symbol: flgG
gene_biotype: protein_coding
description:
  Makes up the distal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06850
symbol: flgH
gene_biotype: protein_coding
description:
  Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: CL52_06855
symbol: flgI
gene_biotype: protein_coding
description:
  Flagellar P-ring protein FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: CL52_06860
symbol: AJE14775.1
gene_biotype: protein_coding
description:
  Flagellar rod assembly protein FlgJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06865
symbol: flgK
gene_biotype: protein_coding
description:
  With FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: CL52_06870
symbol: AJE14777.1
gene_biotype: protein_coding
description:
  Flagellar hook protein FlgL; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06875
symbol: AJE14778.1
gene_biotype: protein_coding
description:
  Competence protein ComEA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06910
symbol: AJE14785.1
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06925
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: CL52_06930
symbol: AJE14789.1
gene_biotype: protein_coding
description:
  ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06935
symbol: minC
gene_biotype: protein_coding
description:
  Septum formation inhibitor; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: CL52_06940
symbol: lpxL
gene_biotype: protein_coding
description:
  Lipid A biosynthesis lauroyl acyltransferase; Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)-(lauroyl)-lipid IV(A).


ensembl_gene_id: CL52_06960
symbol: AJE14795.1
gene_biotype: protein_coding
description:
  Beta (1-6) glucans synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_06970
symbol: actP
gene_biotype: protein_coding
description:
  Acetate permease; Member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: CL52_06990
symbol: AJE14801.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0270 family.


ensembl_gene_id: CL52_07000
symbol: AJE14803.1
gene_biotype: protein_coding
description:
  Peptidase M42; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07005
symbol: AJE14804.1
gene_biotype: protein_coding
description:
  GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07010
symbol: AJE14805.1
gene_biotype: protein_coding
description:
  Asparagine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07015
symbol: AJE14806.1
gene_biotype: protein_coding
description:
  MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07040
symbol: mnmC
gene_biotype: protein_coding
description:
  FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.


ensembl_gene_id: CL52_07055
symbol: AJE14814.1
gene_biotype: protein_coding
description:
  Specific inhibitor of chromosomal initiation of replication in vitro; inds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: CL52_07060
symbol: AJE14815.1
gene_biotype: protein_coding
description:
  Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family.


ensembl_gene_id: CL52_07065
symbol: rlmD
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.


ensembl_gene_id: CL52_07075
symbol: AJE14818.1
gene_biotype: protein_coding
description:
  Nucleoside triphosphate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07080
symbol: AJE14819.1
gene_biotype: protein_coding
description:
  Nucleoprotein/polynucleotide-associated enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07090
symbol: AJE14820.1
gene_biotype: protein_coding
description:
  Carboxylic ester hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07100
symbol: AJE14822.1
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07110
symbol: AJE14824.1
gene_biotype: protein_coding
description:
  ATP-dependent DNA ligase; Catalyzes the ATP-dependent formation of a phosphodiester at the site of a single strand break in duplex DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07115
symbol: AJE14825.1
gene_biotype: protein_coding
description:
  Exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07135
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: CL52_07140
symbol: AJE14830.1
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: CL52_07145
symbol: nqrA
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit A; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.


ensembl_gene_id: CL52_07150
symbol: nqrB
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit B; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.


ensembl_gene_id: CL52_07155
symbol: nqrC
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit C; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.


ensembl_gene_id: CL52_07160
symbol: nqrD
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit D; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family.


ensembl_gene_id: CL52_07165
symbol: nqrE
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit E; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family.


ensembl_gene_id: CL52_07170
symbol: nqrF
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit F; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway.


ensembl_gene_id: CL52_07175
symbol: AJE14837.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.


ensembl_gene_id: CL52_07185
symbol: sthA
gene_biotype: protein_coding
description:
  Pyridine nucleotide-disulfide oxidoreductase; Conversion of NADPH, generated by peripheral catabolic pathways, to NADH, which can enter the respiratory chain for energy generation; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.


ensembl_gene_id: CL52_07190
symbol: AJE14840.1
gene_biotype: protein_coding
description:
  Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07205
symbol: AJE14843.1
gene_biotype: protein_coding
description:
  Cell division protein FtsX; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07210
symbol: lolD
gene_biotype: protein_coding
description:
  ABC transporter; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.


ensembl_gene_id: CL52_07215
symbol: AJE14845.1
gene_biotype: protein_coding
description:
  Multidrug ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07225
symbol: AJE14847.1
gene_biotype: protein_coding
description:
  Competence protein ComEC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07230
symbol: AJE14848.1
gene_biotype: protein_coding
description:
  Biopolymer transporter ExbB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07235
symbol: AJE14849.1
gene_biotype: protein_coding
description:
  Biopolymer transporter ExbD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07240
symbol: lpxK
gene_biotype: protein_coding
description:
  Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: CL52_07245
symbol: AJE14851.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0434 family.


ensembl_gene_id: CL52_07250
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: CL52_07255
symbol: AJE14853.1
gene_biotype: protein_coding
description:
  Protein tyrosine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: CL52_07265
symbol: rne
gene_biotype: protein_coding
description:
  Ribonuclease E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily.


ensembl_gene_id: CL52_07270
symbol: AJE14856.1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: CL52_07280
symbol: AJE14858.1
gene_biotype: protein_coding
description:
  Peptidase S49; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07285
symbol: AJE14859.1
gene_biotype: protein_coding
description:
  Septum formation inhibitor Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes 7- methyl-GTP (m(7)GTP). May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids; Belongs to the Maf family. YceF subfamily.


ensembl_gene_id: CL52_07295
symbol: rpmF
gene_biotype: protein_coding
description:
  Some L32 proteins have zinc finger motifs consisting of CXXC while others do not; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL32 family.


ensembl_gene_id: CL52_07300
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: CL52_07305
symbol: AJE14862.1
gene_biotype: protein_coding
description:
  Malonyl CoA-ACP transacylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07310
symbol: fabG-2
gene_biotype: protein_coding
description:
  3-ketoacyl-ACP reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: CL52_07320
symbol: AJE14865.1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: CL52_07325
symbol: AJE14866.1
gene_biotype: protein_coding
description:
  4-amino-4-deoxychorismate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07330
symbol: mltG
gene_biotype: protein_coding
description:
  Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: CL52_07335
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: CL52_07340
symbol: AJE14869.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07355
symbol: AJE14872.1
gene_biotype: protein_coding
description:
  Aromatic amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07390
symbol: AJE14877.1
gene_biotype: protein_coding
description:
  3-oxoadipate:succinyl-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07400
symbol: AJE14879.1
gene_biotype: protein_coding
description:
  Catalyzes the thiolytic cleavage of beta-ketoadipyl-CoA to succinate and acetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: CL52_07405
symbol: AJE14880.1
gene_biotype: protein_coding
description:
  3-oxoadipate enol-lactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07420
symbol: AJE14882.1
gene_biotype: protein_coding
description:
  Benzene 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07425
symbol: AJE14883.1
gene_biotype: protein_coding
description:
  NADH oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07430
symbol: benD
gene_biotype: protein_coding
description:
  1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Catalyzes the degradation of 2-hydro-1,2-dihydroxy benzoate to catechol; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: CL52_07440
symbol: AJE14886.1
gene_biotype: protein_coding
description:
  Muconate cycloisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mandelate racemase/muconate lactonizing enzyme family.


ensembl_gene_id: CL52_07445
symbol: AJE14887.1
gene_biotype: protein_coding
description:
  Muconolactone delta-isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the muconolactone Delta-isomerase family.


ensembl_gene_id: CL52_07450
symbol: AJE14888.1
gene_biotype: protein_coding
description:
  Catechol 1,2-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07455
symbol: AJE14889.1
gene_biotype: protein_coding
description:
  Benzoate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07465
symbol: AJE14891.1
gene_biotype: protein_coding
description:
  Capsular biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07470
symbol: AJE14892.1
gene_biotype: protein_coding
description:
  N-acetyl-mannosamine transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyltransferase 26 family.


ensembl_gene_id: CL52_07485
symbol: AJE14895.1
gene_biotype: protein_coding
description:
  Coenzyme F420 hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07500
symbol: AJE14898.1
gene_biotype: protein_coding
description:
  Endoglucanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 5 (cellulase A) family.


ensembl_gene_id: CL52_07505
symbol: AJE14899.1
gene_biotype: protein_coding
description:
  Tyrosine protein kinase; Wzc; catalyzes the autophosphorylation on tyrosine residues which downregulates the biosynthesis of colonic acid (an extracellular polysaccharide); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07510
symbol: AJE14900.1
gene_biotype: protein_coding
description:
  Phosphotyrosine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: CL52_07520
symbol: AJE14902.1
gene_biotype: protein_coding
description:
  Lipid kinase; Probably phosphorylates lipids; the in vivo substrate is unknown; Belongs to the diacylglycerol/lipid kinase family. YegS lipid kinase subfamily.


ensembl_gene_id: CL52_07530
symbol: AJE14904.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor sulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07535
symbol: AJE14905.1
gene_biotype: protein_coding
description:
  Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07540
symbol: AJE14906.1
gene_biotype: protein_coding
description:
  ABC transporter ATPase; Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07560
symbol: AJE14910.1
gene_biotype: protein_coding
description:
  Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07570
symbol: AJE14912.1
gene_biotype: protein_coding
description:
  Von Willebrand factor A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07595
symbol: aceK
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase; Bifunctional enzyme which can phosphorylate or dephosphorylate isocitrate dehydrogenase (IDH) on a specific serine residue. This is a regulatory mechanism which enables bacteria to bypass the Krebs cycle via the glyoxylate shunt in response to the source of carbon. When bacteria are grown on glucose, IDH is fully active and unphosphorylated, but when grown on acetate or ethanol, the activity of IDH declines drastically concomitant with its phosphorylation.


ensembl_gene_id: CL52_07620
symbol: AJE14921.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0149 family.


ensembl_gene_id: CL52_07625
symbol: AJE14922.1
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07650
symbol: AJE14927.1
gene_biotype: protein_coding
description:
  tRNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07660
symbol: AJE14929.1
gene_biotype: protein_coding
description:
  Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07680
symbol: AJE14933.1
gene_biotype: protein_coding
description:
  Potassium transporter TrkH; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.


ensembl_gene_id: CL52_07685
symbol: AJE14934.1
gene_biotype: protein_coding
description:
  Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07690
symbol: AJE14935.1
gene_biotype: protein_coding
description:
  Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07715
symbol: AJE14940.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07725
symbol: AJE14942.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SUA5 family.


ensembl_gene_id: CL52_07730
symbol: AJE14943.1
gene_biotype: protein_coding
description:
  tryptophan--tRNA ligase; Catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: CL52_07735
symbol: AJE14944.1
gene_biotype: protein_coding
description:
  Chromosome segregation protein ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: CL52_07740
symbol: AJE14945.1
gene_biotype: protein_coding
description:
  Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: CL52_07745
symbol: edd
gene_biotype: protein_coding
description:
  Phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.


ensembl_gene_id: CL52_07750
symbol: glk
gene_biotype: protein_coding
description:
  Glucokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial glucokinase family.


ensembl_gene_id: CL52_07765
symbol: AJE14950.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07770
symbol: AJE14951.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07780
symbol: AJE14953.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: CL52_07785
symbol: AJE14954.1
gene_biotype: protein_coding
description:
  Maltoporin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07790
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: CL52_07800
symbol: AJE14957.1
gene_biotype: protein_coding
description:
  Keto-deoxy-phosphogluconate aldolase; Catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07805
symbol: AJE14958.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: CL52_07815
symbol: AJE14960.1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07820
symbol: AJE14961.1
gene_biotype: protein_coding
description:
  Phosphoglycolate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07825
symbol: ubiG
gene_biotype: protein_coding
description:
  3-demethylubiquinone-9 3-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.


ensembl_gene_id: CL52_07830
symbol: AJE14963.1
gene_biotype: protein_coding
description:
  N-ethylammeline chlorohydrolase; Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07860
symbol: AJE14964.1
gene_biotype: protein_coding
description:
  Methylthioribose-1-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the eIF-2B alpha/beta/delta subunits family.


ensembl_gene_id: CL52_07865
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: CL52_07870
symbol: serC
gene_biotype: protein_coding
description:
  MFS transporter; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.


ensembl_gene_id: CL52_07875
symbol: AJE14967.1
gene_biotype: protein_coding
description:
  Prephenate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07880
symbol: hisC
gene_biotype: protein_coding
description:
  Aspartate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: CL52_07885
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: CL52_07890
symbol: cmk
gene_biotype: protein_coding
description:
  Cytidylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07895
symbol: rpsA
gene_biotype: protein_coding
description:
  30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.


ensembl_gene_id: CL52_07915
symbol: folE
gene_biotype: protein_coding
description:
  GTP cyclohydrolase; Involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07920
symbol: AJE14976.1
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07935
symbol: prmB
gene_biotype: protein_coding
description:
  SAM-dependent methyltransferase; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily.


ensembl_gene_id: CL52_07950
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: CL52_07960
symbol: mtnB
gene_biotype: protein_coding
description:
  Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). Belongs to the aldolase class II family. MtnB subfamily.


ensembl_gene_id: CL52_07965
symbol: mtnD
gene_biotype: protein_coding
description:
  Acireductone dioxygenase; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway.


ensembl_gene_id: CL52_07980
symbol: AJE14988.1
gene_biotype: protein_coding
description:
  DNA-3-methyladenine glycosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_07985
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: CL52_08010
symbol: pdxB
gene_biotype: protein_coding
description:
  Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate.


ensembl_gene_id: CL52_08020
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: CL52_08025
symbol: AJE14997.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: CL52_08030
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: CL52_08060
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: CL52_08065
symbol: AJE15005.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Global transcription factor that controls the expression of over 100 target genes in response to anoxia; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08070
symbol: AJE15006.1
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: CL52_08075
symbol: nadE
gene_biotype: protein_coding
description:
  NAD synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.


ensembl_gene_id: CL52_08080
symbol: AJE15008.1
gene_biotype: protein_coding
description:
  Cytochrome biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08085
symbol: AJE15009.1
gene_biotype: protein_coding
description:
  Cytochrome C oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08095
symbol: AJE15011.1
gene_biotype: protein_coding
description:
  Cytochrome C oxidase assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08100
symbol: AJE15012.1
gene_biotype: protein_coding
description:
  (Fe-S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08110
symbol: AJE15014.1
gene_biotype: protein_coding
description:
  Cytochrome oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08115
symbol: AJE15015.1
gene_biotype: protein_coding
description:
  Cbb3-type cytochrome c oxidase subunit II; CcoO; FixO; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08120
symbol: AJE15016.1
gene_biotype: protein_coding
description:
  Cbb3-type cytochrome c oxidase subunit I; CcoN; FixN; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: CL52_08155
symbol: rlmM
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Catalyzes the 2'-O-methylation at nucleotide C2498 in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA methyltransferase RlmE family. RlmM subfamily.


ensembl_gene_id: CL52_08160
symbol: tusA
gene_biotype: protein_coding
description:
  Sulfurtransferase; Sulfur carrier protein which probably makes part of a sulfur- relay system; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: CL52_08175
symbol: AJE15027.1
gene_biotype: protein_coding
description:
  Cytochrome B561; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: CL52_08195
symbol: AJE15031.1
gene_biotype: protein_coding
description:
  Ion transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08205
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: CL52_08210
symbol: zipA
gene_biotype: protein_coding
description:
  Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.


ensembl_gene_id: CL52_08225
symbol: AJE17370.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: CL52_08230
symbol: AJE15035.1
gene_biotype: protein_coding
description:
  Flagellin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08235
symbol: AJE15036.1
gene_biotype: protein_coding
description:
  Branched-chain alpha-keto acid dehydrogenase subunit E2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: CL52_08240
symbol: AJE15037.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08245
symbol: ppnP
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.


ensembl_gene_id: CL52_08255
symbol: gltA
gene_biotype: protein_coding
description:
  Type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the citrate synthase family.


ensembl_gene_id: CL52_08260
symbol: AJE15041.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08270
symbol: sdhA
gene_biotype: protein_coding
description:
  Part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.


ensembl_gene_id: CL52_08275
symbol: sdhB
gene_biotype: protein_coding
description:
  Part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08280
symbol: AJE15045.1
gene_biotype: protein_coding
description:
  2-oxoglutarate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08285
symbol: AJE15046.1
gene_biotype: protein_coding
description:
  Dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: CL52_08290
symbol: AJE15047.1
gene_biotype: protein_coding
description:
  E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08295
symbol: sucC
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: CL52_08300
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: CL52_08305
symbol: AJE15050.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid transporter; Component of the transport system for branched-chain amino acids.


ensembl_gene_id: CL52_08335
symbol: AJE15056.1
gene_biotype: protein_coding
description:
  Osmotically inducible protein C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08345
symbol: AJE15057.1
gene_biotype: protein_coding
description:
  5-oxo-L-prolinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08365
symbol: sstT
gene_biotype: protein_coding
description:
  Serine/threonine protein kinase; Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system). Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: CL52_08370
symbol: AJE15062.1
gene_biotype: protein_coding
description:
  FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: CL52_08375
symbol: fabA
gene_biotype: protein_coding
description:
  3-hydroxydecanoyl-ACP dehydratase; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length.


ensembl_gene_id: CL52_08380
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: CL52_08390
symbol: AJE15066.1
gene_biotype: protein_coding
description:
  Phosphohistidine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08395
symbol: AJE15067.1
gene_biotype: protein_coding
description:
  Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08430
symbol: selU
gene_biotype: protein_coding
description:
  tRNA 2-selenouridine synthase; Involved in the post-transcriptional modification of the uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Catalyzes the conversion of 2-thiouridine (S2U-RNA) to 2- selenouridine (Se2U-RNA). Acts in a two-step process involving geranylation of 2-thiouridine (S2U) to S-geranyl-2-thiouridine (geS2U) and subsequent selenation of the latter derivative to 2-selenouridine (Se2U) in the tRNA chain.


ensembl_gene_id: CL52_08450
symbol: AJE15078.1
gene_biotype: protein_coding
description:
  Transglutaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08455
symbol: AJE15079.1
gene_biotype: protein_coding
description:
  acyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08465
symbol: AJE15081.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit TatD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08470
symbol: AJE15082.1
gene_biotype: protein_coding
description:
  Glycosylase; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella. In the N-terminal section; belongs to the bacterial solute- binding protein 3 family.


ensembl_gene_id: CL52_08475
symbol: lifO
gene_biotype: protein_coding
description:
  Lipase chaperone; May be involved in the folding of the extracellular lipase during its passage through the periplasm; Belongs to the lipase chaperone family.


ensembl_gene_id: CL52_08480
symbol: AJE15084.1
gene_biotype: protein_coding
description:
  Lactonizing lipase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08485
symbol: greB
gene_biotype: protein_coding
description:
  Transcription elongation factor GreB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.


ensembl_gene_id: CL52_08535
symbol: cysB
gene_biotype: protein_coding
description:
  LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08545
symbol: thrH
gene_biotype: protein_coding
description:
  Phosphoserine phosphatase; Catalyzes the formation of serine from phosphoserine; also has phosphoserine:homoserine phosphotransferase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08550
symbol: pabB
gene_biotype: protein_coding
description:
  Para-aminobenzoate synthase component 1; catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and L-glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08555
symbol: AJE15099.1
gene_biotype: protein_coding
description:
  alpha-L-glutamate ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08575
symbol: prpB
gene_biotype: protein_coding
description:
  2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.


ensembl_gene_id: CL52_08580
symbol: AJE15104.1
gene_biotype: protein_coding
description:
  Catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08590
symbol: AJE15106.1
gene_biotype: protein_coding
description:
  3-methylitaconate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08595
symbol: AJE15107.1
gene_biotype: protein_coding
description:
  PEP synthetase regulatory protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: CL52_08600
symbol: AJE15108.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: CL52_08605
symbol: AJE15109.1
gene_biotype: protein_coding
description:
  Ribonuclease activity regulator protein RraA; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions.


ensembl_gene_id: CL52_08610
symbol: AJE15110.1
gene_biotype: protein_coding
description:
  CmaX protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08615
symbol: AJE15111.1
gene_biotype: protein_coding
description:
  CrfX protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08625
symbol: AJE15113.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor SigX; Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in Pseudomonas fluorescens and P. aeruginosa regulates outer membrane protein OprF expression; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: CL52_08635
symbol: AJE15115.1
gene_biotype: protein_coding
description:
  Bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aconitase/IPM isomerase family.


ensembl_gene_id: CL52_08640
symbol: AJE15116.1
gene_biotype: protein_coding
description:
  Fe-S protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08650
symbol: AJE15118.1
gene_biotype: protein_coding
description:
  tRNA hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08655
symbol: lpxH
gene_biotype: protein_coding
description:
  UDP-2,3-diacylglucosamine hydrolase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: CL52_08660
symbol: AJE15120.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: CL52_08665
symbol: glnS
gene_biotype: protein_coding
description:
  glutamate--tRNA ligase; Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08670
symbol: cysS
gene_biotype: protein_coding
description:
  cysteinyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: CL52_08675
symbol: folD
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: CL52_08710
symbol: AJE15126.1
gene_biotype: protein_coding
description:
  Ion channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08730
symbol: AJE15130.1
gene_biotype: protein_coding
description:
  Xanthine/uracil/vitamin C permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08735
symbol: AJE15131.1
gene_biotype: protein_coding
description:
  acyl-CoA synthetase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08755
symbol: AJE15135.1
gene_biotype: protein_coding
description:
  acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: CL52_08760
symbol: fadB
gene_biotype: protein_coding
description:
  Multifunctional fatty acid oxidation complex subunit alpha; Includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; forms a heterotetramer with FadA; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08770
symbol: AJE15138.1
gene_biotype: protein_coding
description:
  Electron transporter RnfB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08775
symbol: AJE15139.1
gene_biotype: protein_coding
description:
  Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08780
symbol: AJE15140.1
gene_biotype: protein_coding
description:
  Threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde.


ensembl_gene_id: CL52_08795
symbol: AJE15141.1
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08830
symbol: AJE15146.1
gene_biotype: protein_coding
description:
  Nitric oxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08855
symbol: AJE15151.1
gene_biotype: protein_coding
description:
  Carbamate kinase; Reversible synthesis of carbamate and ATP from carbamoyl phosphate and ADP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08865
symbol: arcA
gene_biotype: protein_coding
description:
  Arginine deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08870
symbol: AJE15154.1
gene_biotype: protein_coding
description:
  Amino acid APC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08895
symbol: AJE15158.1
gene_biotype: protein_coding
description:
  enoyl-ACP reductase; Catalyzes a key regulatory step in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08900
symbol: AJE15159.1
gene_biotype: protein_coding
description:
  Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: CL52_08910
symbol: AJE15161.1
gene_biotype: protein_coding
description:
  Microcin ABC transporter permease; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_08935
symbol: gloB
gene_biotype: protein_coding
description:
  Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.


ensembl_gene_id: CL52_08950
symbol: dnaQ
gene_biotype: protein_coding
description:
  DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.


ensembl_gene_id: CL52_08960
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: CL52_08965
symbol: AJE15172.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: CL52_09015
symbol: AJE15178.1
gene_biotype: protein_coding
description:
  Nuclease; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.


ensembl_gene_id: CL52_09030
symbol: AJE15181.1
gene_biotype: protein_coding
description:
  UTP--glucose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09040
symbol: AJE15183.1
gene_biotype: protein_coding
description:
  Glutathione reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09055
symbol: glgE
gene_biotype: protein_coding
description:
  Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.


ensembl_gene_id: CL52_09060
symbol: AJE15186.1
gene_biotype: protein_coding
description:
  Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09065
symbol: glgB
gene_biotype: protein_coding
description:
  Glycogen branching protein; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: CL52_09085
symbol: pqqE
gene_biotype: protein_coding
description:
  Pyrroloquinoline quinone biosynthesis protein PqqE; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).


ensembl_gene_id: CL52_09090
symbol: AJE15192.1
gene_biotype: protein_coding
description:
  Pyrroloquinoline quinone biosynthesis protein PqqD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09100
symbol: AJE15194.1
gene_biotype: protein_coding
description:
  NADH:flavin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09105
symbol: pqqB
gene_biotype: protein_coding
description:
  Pyrroloquinoline quinone biosynthesis protein PqqB; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family.


ensembl_gene_id: CL52_09110
symbol: pqqC
gene_biotype: protein_coding
description:
  Pyrroloquinoline quinone biosynthesis protein PqqC; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ.


ensembl_gene_id: CL52_09115
symbol: pqqD
gene_biotype: protein_coding
description:
  Pyrroloquinoline quinone biosynthesis protein PqqD; Functions as a PqqA binding protein and presents PqqA to PqqE, in the pyrroloquinoline quinone (PQQ) biosynthetic pathway.


ensembl_gene_id: CL52_09125
symbol: AJE15199.1
gene_biotype: protein_coding
description:
  Peptidase S9; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09140
symbol: AJE15202.1
gene_biotype: protein_coding
description:
  Lysine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09145
symbol: AJE15203.1
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: CL52_09150
symbol: AJE15204.1
gene_biotype: protein_coding
description:
  Ferrous iron transporter B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09155
symbol: nudC
gene_biotype: protein_coding
description:
  NADH pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family. NudC subfamily.


ensembl_gene_id: CL52_09185
symbol: AJE15211.1
gene_biotype: protein_coding
description:
  Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09200
symbol: AJE15213.1
gene_biotype: protein_coding
description:
  Molecular chaperone Hsp20; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: CL52_09205
symbol: AJE15214.1
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09210
symbol: AJE15215.1
gene_biotype: protein_coding
description:
  Protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09215
symbol: AJE15216.1
gene_biotype: protein_coding
description:
  23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: CL52_09245
symbol: AJE15222.1
gene_biotype: protein_coding
description:
  Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.


ensembl_gene_id: CL52_09255
symbol: nfuA
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.


ensembl_gene_id: CL52_09260
symbol: AJE15225.1
gene_biotype: protein_coding
description:
  DNA topoisomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09290
symbol: uppP
gene_biotype: protein_coding
description:
  UDP pyrophosphate phosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: CL52_09295
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: CL52_09300
symbol: clpP
gene_biotype: protein_coding
description:
  Clp protease ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: CL52_09305
symbol: clpX
gene_biotype: protein_coding
description:
  Clp protease ATP-binding protein; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: CL52_09310
symbol: lon
gene_biotype: protein_coding
description:
  DNA-binding protein; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: CL52_09315
symbol: AJE15235.1
gene_biotype: protein_coding
description:
  Transcriptional regulator HU subunit alpha; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: CL52_09350
symbol: AJE15240.1
gene_biotype: protein_coding
description:
  3-phytase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09355
symbol: tolQ
gene_biotype: protein_coding
description:
  Protein tolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: CL52_09360
symbol: tolR
gene_biotype: protein_coding
description:
  Biopolymer transporter TolR; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: CL52_09365
symbol: AJE15243.1
gene_biotype: protein_coding
description:
  Energy transducer TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.


ensembl_gene_id: CL52_09370
symbol: AJE15244.1
gene_biotype: protein_coding
description:
  Tat pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09375
symbol: AJE15245.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; Rotamase C; accelerates isomerization of the peptidyl prolyl bond; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09380
symbol: AJE15246.1
gene_biotype: protein_coding
description:
  Gluconokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09385
symbol: AJE15247.1
gene_biotype: protein_coding
description:
  L-dehydroascorbate transporter large permease subunit; TRAP family transporter; with YiaMO is involved in the uptake of L-dehydroascorbate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09395
symbol: AJE15249.1
gene_biotype: protein_coding
description:
  LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09415
symbol: AJE15253.1
gene_biotype: protein_coding
description:
  Exonuclease III; Removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09435
symbol: AJE15257.1
gene_biotype: protein_coding
description:
  Sodium:alanine symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09440
symbol: tpx
gene_biotype: protein_coding
description:
  Peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.


ensembl_gene_id: CL52_09445
symbol: AJE15259.1
gene_biotype: protein_coding
description:
  NAD(P)-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09450
symbol: AJE15260.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09465
symbol: clsB
gene_biotype: protein_coding
description:
  Cardiolipin synthase 2; Catalyzes the phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.


ensembl_gene_id: CL52_09480
symbol: AJE15266.1
gene_biotype: protein_coding
description:
  Alanine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09490
symbol: AJE15268.1
gene_biotype: protein_coding
description:
  Aromatic ring-opening dioxygenase LigA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09505
symbol: AJE15270.1
gene_biotype: protein_coding
description:
  Glycogen debranching protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: CL52_09515
symbol: AJE15272.1
gene_biotype: protein_coding
description:
  Maltooligosyl trehalose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09520
symbol: AJE15273.1
gene_biotype: protein_coding
description:
  4-alpha-glucanotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09525
symbol: AJE15274.1
gene_biotype: protein_coding
description:
  Malto-oligosyltrehalose trehalohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09535
symbol: AJE15276.1
gene_biotype: protein_coding
description:
  Ompetence-damaged protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.


ensembl_gene_id: CL52_09565
symbol: ligD
gene_biotype: protein_coding
description:
  ATP-dependent DNA ligase; Catalyzes the ATP dependent formation of a phosphodiester at the site of a single-strand break in duplex DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09590
symbol: AJE15286.1
gene_biotype: protein_coding
description:
  Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: CL52_09620
symbol: AJE15292.1
gene_biotype: protein_coding
description:
  Serine peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family.


ensembl_gene_id: CL52_09660
symbol: ku
gene_biotype: protein_coding
description:
  DNA repair protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.


ensembl_gene_id: CL52_09705
symbol: AJE15308.1
gene_biotype: protein_coding
description:
  Acriflavine resistance protein B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: CL52_09710
symbol: AJE15309.1
gene_biotype: protein_coding
description:
  Multidrug transporter; Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: CL52_09715
symbol: AJE15310.1
gene_biotype: protein_coding
description:
  Secretion protein HlyD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: CL52_09730
symbol: AJE15313.1
gene_biotype: protein_coding
description:
  Sulfur oxidation protein SoxZ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09750
symbol: AJE15316.1
gene_biotype: protein_coding
description:
  Quinonprotein alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09825
symbol: AJE15328.1
gene_biotype: protein_coding
description:
  Multidrug ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09845
symbol: AJE15331.1
gene_biotype: protein_coding
description:
  GfdT protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09855
symbol: AJE15333.1
gene_biotype: protein_coding
description:
  Pyrroloquinoline quinone biosynthesis protein PqqF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09880
symbol: folX
gene_biotype: protein_coding
description:
  D-erythro-7,8-dihydroneopterin triphosphate epimerase; Catalyzes the formation of dihydromonapterin triphosphate from dihydroneopterin triphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09890
symbol: AJE15339.1
gene_biotype: protein_coding
description:
  Sodium:melibiose symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09910
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: CL52_09915
symbol: AJE15344.1
gene_biotype: protein_coding
description:
  NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09935
symbol: AJE15348.1
gene_biotype: protein_coding
description:
  Deoxyribodipyrimidine photolyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA photolyase family.


ensembl_gene_id: CL52_09960
symbol: AJE15353.1
gene_biotype: protein_coding
description:
  Cyclopropane-fatty-acyl-phospholipid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09970
symbol: AJE15355.1
gene_biotype: protein_coding
description:
  Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: CL52_09975
symbol: AJE15356.1
gene_biotype: protein_coding
description:
  Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09980
symbol: AJE15357.1
gene_biotype: protein_coding
description:
  Formate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09990
symbol: AJE15359.1
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein CcsA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_09995
symbol: AJE15360.1
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10000
symbol: cobB
gene_biotype: protein_coding
description:
  NAD-dependent deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sirtuin family. Class III subfamily.


ensembl_gene_id: CL52_10005
symbol: AJE15362.1
gene_biotype: protein_coding
description:
  Helicase UvrD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10015
symbol: AJE15364.1
gene_biotype: protein_coding
description:
  Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10020
symbol: AJE15365.1
gene_biotype: protein_coding
description:
  methoxymalonyl-ACP biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10025
symbol: AJE15366.1
gene_biotype: protein_coding
description:
  Alginate O-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane-bound acyltransferase family.


ensembl_gene_id: CL52_10035
symbol: AJE15368.1
gene_biotype: protein_coding
description:
  Glycosyl transferase family 51; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10055
symbol: AJE15372.1
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: CL52_10060
symbol: AJE15373.1
gene_biotype: protein_coding
description:
  3-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HIBADH-related family.


ensembl_gene_id: CL52_10065
symbol: AJE15374.1
gene_biotype: protein_coding
description:
  Crotonase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10080
symbol: AJE15377.1
gene_biotype: protein_coding
description:
  DNA topoisomerase III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10085
symbol: AJE15378.1
gene_biotype: protein_coding
description:
  Carnitine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CoA-transferase III family.


ensembl_gene_id: CL52_10090
symbol: AJE15379.1
gene_biotype: protein_coding
description:
  Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10105
symbol: AJE15382.1
gene_biotype: protein_coding
description:
  3-hydroxy-2-methylbutyryl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: CL52_10145
symbol: AJE15388.1
gene_biotype: protein_coding
description:
  Carbon storage regulator CsrA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10175
symbol: AJE15393.1
gene_biotype: protein_coding
description:
  Sulfur relay protein DsrH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10180
symbol: AJE15394.1
gene_biotype: protein_coding
description:
  Sulfur relay protein TusC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DsrF/TusC family.


ensembl_gene_id: CL52_10190
symbol: AJE15396.1
gene_biotype: protein_coding
description:
  Membrane protein; Binds to the HflBKC complex which modulates FtsH activity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BI1 family.


ensembl_gene_id: CL52_10200
symbol: cysG
gene_biotype: protein_coding
description:
  Sirohydrochlorin ferrochelatase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family.  In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family.


ensembl_gene_id: CL52_10205
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: CL52_10210
symbol: crcB
gene_biotype: protein_coding
description:
  Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: CL52_10215
symbol: AJE15400.1
gene_biotype: protein_coding
description:
  Recombination factor protein RarA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10220
symbol: lolA
gene_biotype: protein_coding
description:
  Membrane protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: CL52_10225
symbol: AJE15402.1
gene_biotype: protein_coding
description:
  Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10230
symbol: AJE15403.1
gene_biotype: protein_coding
description:
  Thioredoxin reductase; Catalyzes the transfer of electrons from NADPH to thioredoxin; FAD/NAD(P) binding; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10235
symbol: aat
gene_biotype: protein_coding
description:
  leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: CL52_10240
symbol: bpt
gene_biotype: protein_coding
description:
  arginyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.


ensembl_gene_id: CL52_10245
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: CL52_10250
symbol: clpA
gene_biotype: protein_coding
description:
  Clp protease ClpX; ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease; directs protease to specific substrates; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family.


ensembl_gene_id: CL52_10255
symbol: clpS
gene_biotype: protein_coding
description:
  Clp protease ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: CL52_10265
symbol: AJE15410.1
gene_biotype: protein_coding
description:
  Converts isocitrate to alpha ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10270
symbol: AJE15411.1
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase; NADP-specific, catalyzes the formation of 2-oxoglutarate from isocitrate or oxalosuccinate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the monomeric-type IDH family.


ensembl_gene_id: CL52_10275
symbol: nudJ
gene_biotype: protein_coding
description:
  NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family. NudJ subfamily.


ensembl_gene_id: CL52_10280
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA 2-thiouridylase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: CL52_10290
symbol: AJE15414.1
gene_biotype: protein_coding
description:
  Adenylosuccinate lyase; Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: CL52_10305
symbol: AJE15417.1
gene_biotype: protein_coding
description:
  Secretin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10310
symbol: AJE15418.1
gene_biotype: protein_coding
description:
  Isocitrate lyase; Catalyzes the first step in the glyoxalate cycle, which converts lipids to carbohydrates; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10350
symbol: AJE15421.1
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10355
symbol: AJE15422.1
gene_biotype: protein_coding
description:
  3-ketosteroid-9-alpha-hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10365
symbol: AJE15423.1
gene_biotype: protein_coding
description:
  Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.


ensembl_gene_id: CL52_10395
symbol: AJE15429.1
gene_biotype: protein_coding
description:
  Laminin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10400
symbol: AJE15430.1
gene_biotype: protein_coding
description:
  Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10405
symbol: AJE15431.1
gene_biotype: protein_coding
description:
  GTPase subunit of restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10415
symbol: AJE15433.1
gene_biotype: protein_coding
description:
  Restriction endonuclease HindVIIP subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10475
symbol: AJE15440.1
gene_biotype: protein_coding
description:
  DNA polymerase V subunit UmuC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10480
symbol: AJE15441.1
gene_biotype: protein_coding
description:
  Cytochrome C551; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10505
symbol: AJE15446.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione; also catalyzes the formation of aldehyde or ketone from alcohols; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.


ensembl_gene_id: CL52_10510
symbol: AJE15447.1
gene_biotype: protein_coding
description:
  Regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10515
symbol: AJE15448.1
gene_biotype: protein_coding
description:
  Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: CL52_10550
symbol: AJE15451.1
gene_biotype: protein_coding
description:
  ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10560
symbol: AJE15452.1
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10565
symbol: nhaA
gene_biotype: protein_coding
description:
  Sodium:proton antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.


ensembl_gene_id: CL52_10580
symbol: AJE15455.1
gene_biotype: protein_coding
description:
  Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10615
symbol: AJE15461.1
gene_biotype: protein_coding
description:
  Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10620
symbol: AJE15462.1
gene_biotype: protein_coding
description:
  Pyocin activator protein PrtN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10625
symbol: dusA
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U20 and U20a in tRNAs; Belongs to the Dus family. DusA subfamily.


ensembl_gene_id: CL52_10630
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.


ensembl_gene_id: CL52_10635
symbol: AJE15465.1
gene_biotype: protein_coding
description:
  Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10660
symbol: queF
gene_biotype: protein_coding
description:
  NADPH-dependent 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).


ensembl_gene_id: CL52_10675
symbol: fadE
gene_biotype: protein_coding
description:
  acyl-CoA dehydrogenase; Functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10690
symbol: AJE15476.1
gene_biotype: protein_coding
description:
  Lipid carrier : UDP-N-acetylgalactosaminyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10695
symbol: AJE15477.1
gene_biotype: protein_coding
description:
  Nucleoside-diphosphate sugar epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10700
symbol: AJE15478.1
gene_biotype: protein_coding
description:
  Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10705
symbol: AJE15479.1
gene_biotype: protein_coding
description:
  Mannosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10710
symbol: AJE15480.1
gene_biotype: protein_coding
description:
  GDP-6-deoxy-D-lyxo-4-hexulose reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10715
symbol: AJE15481.1
gene_biotype: protein_coding
description:
  GDP-D-mannose dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10725
symbol: AJE15483.1
gene_biotype: protein_coding
description:
  FkbM family methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10730
symbol: AJE15484.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10740
symbol: cpsB
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanyltransferase; Capsular polysaccharide colanic acid biosynthesis protein; catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mannose-6-phosphate isomerase type 2 family.


ensembl_gene_id: CL52_10745
symbol: AJE15487.1
gene_biotype: protein_coding
description:
  Phosphomannomutase; Capsular polysaccharide biosynthesis protein; catalyzes the formation of D-mannose 6-phosphate from alpha-D-mannose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10750
symbol: ihfB
gene_biotype: protein_coding
description:
  Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: CL52_10770
symbol: AJE15492.1
gene_biotype: protein_coding
description:
  Host specificity protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family.


ensembl_gene_id: CL52_10780
symbol: AJE15494.1
gene_biotype: protein_coding
description:
  2-methylcitrate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10815
symbol: AJE15501.1
gene_biotype: protein_coding
description:
  Class I peptide chain release factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10825
symbol: AJE15503.1
gene_biotype: protein_coding
description:
  Amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10845
symbol: AJE15507.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0176 family.


ensembl_gene_id: CL52_10850
symbol: AJE15508.1
gene_biotype: protein_coding
description:
  BolA family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BolA/IbaG family.


ensembl_gene_id: CL52_10860
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: CL52_10870
symbol: AJE15512.1
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10875
symbol: AJE15513.1
gene_biotype: protein_coding
description:
  4'-phosphopantetheinyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the P-Pant transferase superfamily.


ensembl_gene_id: CL52_10900
symbol: AJE15516.1
gene_biotype: protein_coding
description:
  Ribonucleotide-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.


ensembl_gene_id: CL52_10955
symbol: katG
gene_biotype: protein_coding
description:
  Hydroperoxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.


ensembl_gene_id: CL52_10960
symbol: AJE15526.1
gene_biotype: protein_coding
description:
  Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_10995
symbol: AJE15533.1
gene_biotype: protein_coding
description:
  SCP-2 family sterol carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11000
symbol: AJE15534.1
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11030
symbol: AJE15540.1
gene_biotype: protein_coding
description:
  Anti-sigma regulatory factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11035
symbol: AJE15541.1
gene_biotype: protein_coding
description:
  Anti-sigma factor antagonist; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11040
symbol: AJE15542.1
gene_biotype: protein_coding
description:
  Polyvinylalcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11075
symbol: AJE15549.1
gene_biotype: protein_coding
description:
  DNA repair nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11080
symbol: dnaE2
gene_biotype: protein_coding
description:
  DNA polymerase; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase.


ensembl_gene_id: CL52_11115
symbol: AJE15557.1
gene_biotype: protein_coding
description:
  Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11120
symbol: AJE15558.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain.


ensembl_gene_id: CL52_11130
symbol: AJE15559.1
gene_biotype: protein_coding
description:
  NuoH2 NADH chain H; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11135
symbol: AJE15560.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: CL52_11140
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH-ubiquinone oxidoreductase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: CL52_11155
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit L; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: CL52_11170
symbol: ihfA
gene_biotype: protein_coding
description:
  Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: CL52_11175
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: CL52_11180
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: CL52_11185
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: CL52_11190
symbol: rpmI
gene_biotype: protein_coding
description:
  50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL35 family.


ensembl_gene_id: CL52_11195
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: CL52_11200
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: CL52_11210
symbol: AJE15573.1
gene_biotype: protein_coding
description:
  Gamma-glutamylputrescine oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11235
symbol: mobA
gene_biotype: protein_coding
description:
  Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.


ensembl_gene_id: CL52_11250
symbol: AJE15580.1
gene_biotype: protein_coding
description:
  Glutaredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11275
symbol: AJE15585.1
gene_biotype: protein_coding
description:
  Deoxyguanosinetriphosphate triphosphohydrolase; dGTPase family type 3 subfamily, presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11290
symbol: AJE15588.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11295
symbol: rlmL
gene_biotype: protein_coding
description:
  50S rRNA methyltransferase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family.


ensembl_gene_id: CL52_11300
symbol: rmf
gene_biotype: protein_coding
description:
  Ribosome modulation factor; During stationary phase, converts 70S ribosomes to an inactive dimeric form (100S ribosomes); Belongs to the ribosome modulation factor family.


ensembl_gene_id: CL52_11305
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: CL52_11310
symbol: AJE15592.1
gene_biotype: protein_coding
description:
  Topoisomerase II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11320
symbol: AJE15594.1
gene_biotype: protein_coding
description:
  NAD-glutamate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11340
symbol: AJE15598.1
gene_biotype: protein_coding
description:
  BatB protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11350
symbol: AJE15600.1
gene_biotype: protein_coding
description:
  Protein BatD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11380
symbol: AJE15605.1
gene_biotype: protein_coding
description:
  Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.


ensembl_gene_id: CL52_11385
symbol: AJE15606.1
gene_biotype: protein_coding
description:
  uroporphyrin-III methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the precorrin methyltransferase family.


ensembl_gene_id: CL52_11390
symbol: AJE15607.1
gene_biotype: protein_coding
description:
  Phosphofructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: CL52_11400
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: CL52_11405
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: CL52_11410
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; In the C-terminal section; belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: CL52_11415
symbol: AJE15612.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase; Catalyzes the transfer of electrons from NADH to quinone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11420
symbol: AJE15613.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.


ensembl_gene_id: CL52_11425
symbol: AJE15614.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.


ensembl_gene_id: CL52_11430
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: CL52_11445
symbol: nuoK-2
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: CL52_11450
symbol: AJE15619.1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit L; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11455
symbol: AJE15620.1
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11460
symbol: nuoN-2
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: CL52_11490
symbol: AJE15627.1
gene_biotype: protein_coding
description:
  Peptidase S54; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11500
symbol: ppnK
gene_biotype: protein_coding
description:
  Inorganic polyphosphate kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: CL52_11505
symbol: AJE15630.1
gene_biotype: protein_coding
description:
  Cobalt chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11510
symbol: AJE15631.1
gene_biotype: protein_coding
description:
  Chromate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11515
symbol: AJE15632.1
gene_biotype: protein_coding
description:
  1-aminocyclopropane-1-carboxylate deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11525
symbol: fadH
gene_biotype: protein_coding
description:
  2,4-dienoyl-CoA reductase; Catalyzes the formation of trans-2- enoyl-CoA from 2,4-dienoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11550
symbol: AJE15637.1
gene_biotype: protein_coding
description:
  Ubiquinol oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11555
symbol: AJE15638.1
gene_biotype: protein_coding
description:
  Cytochrome D ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11585
symbol: AJE15644.1
gene_biotype: protein_coding
description:
  Dihydrolipoamide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11590
symbol: AJE15645.1
gene_biotype: protein_coding
description:
  Metallo-beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11595
symbol: AJE15646.1
gene_biotype: protein_coding
description:
  Asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11635
symbol: AJE15651.1
gene_biotype: protein_coding
description:
  Secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11640
symbol: AJE15652.1
gene_biotype: protein_coding
description:
  General secretion pathway protein GspD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11645
symbol: metZ
gene_biotype: protein_coding
description:
  O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.


ensembl_gene_id: CL52_11650
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: CL52_11655
symbol: AJE15655.1
gene_biotype: protein_coding
description:
  Colicin V production CvpA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11665
symbol: AJE15657.1
gene_biotype: protein_coding
description:
  Folylpolyglutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: CL52_11670
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: CL52_11680
symbol: trpF
gene_biotype: protein_coding
description:
  N-(5'-phosphoribosyl)anthranilate isomerase; Catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TrpF family.


ensembl_gene_id: CL52_11685
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: CL52_11690
symbol: AJE15661.1
gene_biotype: protein_coding
description:
  Peptigoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11695
symbol: AJE15662.1
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: CL52_11700
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: CL52_11705
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: CL52_11710
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: CL52_11715
symbol: leuC
gene_biotype: protein_coding
description:
  Isopropylmalate isomerase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: CL52_11730
symbol: AJE15669.1
gene_biotype: protein_coding
description:
  Heat-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: CL52_11735
symbol: AJE15670.1
gene_biotype: protein_coding
description:
  Sugar dehydrogenase; Converts glucose to D-glucono-1,5 lactone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11740
symbol: dusC
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase C; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily.


ensembl_gene_id: CL52_11765
symbol: AJE15674.1
gene_biotype: protein_coding
description:
  Aminotransferase DegT; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: CL52_11770
symbol: AJE15675.1
gene_biotype: protein_coding
description:
  Polysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11775
symbol: AJE15676.1
gene_biotype: protein_coding
description:
  Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11790
symbol: rfaH
gene_biotype: protein_coding
description:
  Transcriptional regulator; Enhances distal genes transcription elongation in a specialized subset of operons that encode extracytoplasmic components. Belongs to the RfaH family.


ensembl_gene_id: CL52_11845
symbol: AJE15688.1
gene_biotype: protein_coding
description:
  Type II secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11850
symbol: AJE15689.1
gene_biotype: protein_coding
description:
  Secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11855
symbol: AJE15690.1
gene_biotype: protein_coding
description:
  Pilus assembly protein CpaF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11870
symbol: AJE15693.1
gene_biotype: protein_coding
description:
  Pilus assembly protein TadG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11885
symbol: AJE15696.1
gene_biotype: protein_coding
description:
  Pilus assembly protein CpaC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial secretin family.


ensembl_gene_id: CL52_11890
symbol: AJE15697.1
gene_biotype: protein_coding
description:
  Pilus assembly protein CpaB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11905
symbol: AJE15700.1
gene_biotype: protein_coding
description:
  Pilus assembly protein PilA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11920
symbol: AJE15703.1
gene_biotype: protein_coding
description:
  Arsenical pump membrane protein; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family.


ensembl_gene_id: CL52_11930
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: CL52_11935
symbol: betA
gene_biotype: protein_coding
description:
  Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.


ensembl_gene_id: CL52_11940
symbol: betB
gene_biotype: protein_coding
description:
  Betaine-aldehyde dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid.


ensembl_gene_id: CL52_11945
symbol: AJE15707.1
gene_biotype: protein_coding
description:
  Proton-motive-force-driven choline transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BCCT transporter (TC 2.A.15) family.


ensembl_gene_id: CL52_11960
symbol: AJE15710.1
gene_biotype: protein_coding
description:
  Acyl-homoserine lactone acylase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_11975
symbol: AJE15713.1
gene_biotype: protein_coding
description:
  5'-methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioinosine (MTI) to hypoxanthine and 5-methylthioribose-1-phosphate. Involved in the breakdown of S-methyl-5'-thioadenosine (MTA), a major by-product of polyamine biosynthesis. Catabolism of (MTA) occurs via deamination to MTI and phosphorolysis to hypoxanthine.


ensembl_gene_id: CL52_11980
symbol: nagZ
gene_biotype: protein_coding
description:
  Beta-hexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.


ensembl_gene_id: CL52_11995
symbol: lexA
gene_biotype: protein_coding
description:
  LexA family transcriptional regulator; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: CL52_12000
symbol: AJE15718.1
gene_biotype: protein_coding
description:
  Cell division protein; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division.


ensembl_gene_id: CL52_12010
symbol: AJE15720.1
gene_biotype: protein_coding
description:
  PasA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12015
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: CL52_12025
symbol: fadA
gene_biotype: protein_coding
description:
  3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed.


ensembl_gene_id: CL52_12030
symbol: fadB-2
gene_biotype: protein_coding
description:
  Multifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: CL52_12050
symbol: argD
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase; DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: CL52_12055
symbol: AJE15729.1
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12075
symbol: AJE15732.1
gene_biotype: protein_coding
description:
  Murein hydrolase transporter LrgA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12110
symbol: acsA
gene_biotype: protein_coding
description:
  acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: CL52_12120
symbol: deaD
gene_biotype: protein_coding
description:
  RNA helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.


ensembl_gene_id: CL52_12130
symbol: AJE15737.1
gene_biotype: protein_coding
description:
  Spermidine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12135
symbol: AJE15738.1
gene_biotype: protein_coding
description:
  Phospho-2-dehydro-3-deoxyheptonate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12140
symbol: AJE15739.1
gene_biotype: protein_coding
description:
  Anion transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12145
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: CL52_12155
symbol: AJE15742.1
gene_biotype: protein_coding
description:
  FAD-dependent oxidoreductase; Catalyzes the oxidation of the 1,2-dihydro- and 1,6- dihydro- isomeric forms of beta-NAD(P) back to beta-NAD(P)+. May serve to protect primary metabolism dehydrogenases from inhibition by the 1,2-dihydro- and 1,6-dihydro-beta-NAD(P) isomers; Belongs to the bacterial renalase family.


ensembl_gene_id: CL52_12160
symbol: AJE15743.1
gene_biotype: protein_coding
description:
  Chemotaxis protein MotA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12165
symbol: AJE15744.1
gene_biotype: protein_coding
description:
  Flagellar motor protein MotB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12185
symbol: lolD-2
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.


ensembl_gene_id: CL52_12195
symbol: AJE15750.1
gene_biotype: protein_coding
description:
  Sulfate:proton symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12220
symbol: AJE15755.1
gene_biotype: protein_coding
description:
  YeeE/YedE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12265
symbol: msrB
gene_biotype: protein_coding
description:
  Methionine sulfoxide reductase B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MsrB Met sulfoxide reductase family.


ensembl_gene_id: CL52_12270
symbol: AJE15763.1
gene_biotype: protein_coding
description:
  Aminotransferase; Broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12280
symbol: htpX
gene_biotype: protein_coding
description:
  Protease HtpX; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M48B family.


ensembl_gene_id: CL52_12285
symbol: AJE15766.1
gene_biotype: protein_coding
description:
  DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12290
symbol: tpm
gene_biotype: protein_coding
description:
  Thiopurine S-methyltransferase; Catalyzes the S-adenosylmethionine-dependent transmethylation of thiopurine compounds; may be involved in selenium cycling by forming dimethylselenide and/or dimethyldiselenide; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family.


ensembl_gene_id: CL52_12310
symbol: AJE15771.1
gene_biotype: protein_coding
description:
  Flagellar assembly protein FliT; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12330
symbol: AJE15775.1
gene_biotype: protein_coding
description:
  Cytochrome c-type biogenesis protein; required for the transfer of heme to apocytochrome c; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12335
symbol: ccmE
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.


ensembl_gene_id: CL52_12340
symbol: AJE15777.1
gene_biotype: protein_coding
description:
  Hemagglutination activity protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family.


ensembl_gene_id: CL52_12345
symbol: ccmC
gene_biotype: protein_coding
description:
  Heme ABC transporter permease; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.


ensembl_gene_id: CL52_12350
symbol: AJE15779.1
gene_biotype: protein_coding
description:
  Heme transporter; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family.


ensembl_gene_id: CL52_12355
symbol: ccmA
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.


ensembl_gene_id: CL52_12360
symbol: AJE15781.1
gene_biotype: protein_coding
description:
  Flagellar hook-length control protein FliK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12365
symbol: AJE15782.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12395
symbol: AJE15788.1
gene_biotype: protein_coding
description:
  Flagellar motor protein MotD; Homologous to MotB. These organism have both MotB and MotD. With MotC (a MotA homolog) forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine. Either MotAB or MotCD is sufficient for swimming, but both are necessary for swarming motility; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12400
symbol: motC
gene_biotype: protein_coding
description:
  Flagellar motor protein; Homologous to MotA; this protein with a related protein (a MotB homolog) forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; either MotAB or MotCD is sufficient for swimming, but both are necessary for swarming motility; these organisms have both MotA and MotC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12405
symbol: cheB
gene_biotype: protein_coding
description:
  Chemotaxis protein CheY; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: CL52_12410
symbol: AJE15791.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12415
symbol: AJE15792.1
gene_biotype: protein_coding
description:
  Protein phosphatase; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).


ensembl_gene_id: CL52_12425
symbol: fliA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.


ensembl_gene_id: CL52_12430
symbol: AJE15795.1
gene_biotype: protein_coding
description:
  Cobyrinic acid a,c-diamide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12435
symbol: flhF
gene_biotype: protein_coding
description:
  Positive regulator of class III flagellar genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12440
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: CL52_12445
symbol: AJE15798.1
gene_biotype: protein_coding
description:
  Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.


ensembl_gene_id: CL52_12450
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: CL52_12455
symbol: AJE15800.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: CL52_12460
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: CL52_12465
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein flip; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: CL52_12470
symbol: AJE15803.1
gene_biotype: protein_coding
description:
  Flagellar assembly protein FliO; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12475
symbol: fliN
gene_biotype: protein_coding
description:
  Flagellar motor switch protein; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.


ensembl_gene_id: CL52_12480
symbol: AJE15805.1
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.


ensembl_gene_id: CL52_12490
symbol: AJE15807.1
gene_biotype: protein_coding
description:
  Flagellar hook-length control protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12510
symbol: AJE15811.1
gene_biotype: protein_coding
description:
  Flagellar biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12515
symbol: fliI
gene_biotype: protein_coding
description:
  ATP synthase; Involved in type III protein export during flagellum assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12520
symbol: AJE15813.1
gene_biotype: protein_coding
description:
  Flagellar assembly protein FliH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12525
symbol: AJE15814.1
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.


ensembl_gene_id: CL52_12530
symbol: AJE15815.1
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: CL52_12535
symbol: fliE
gene_biotype: protein_coding
description:
  Flagellar hook-basal body protein FliE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12550
symbol: AJE15819.1
gene_biotype: protein_coding
description:
  NADP-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12555
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: CL52_12625
symbol: AJE15834.1
gene_biotype: protein_coding
description:
  Class V aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12705
symbol: AJE15850.1
gene_biotype: protein_coding
description:
  Glycerol uptake facilitator GlpF; Involved in the transport of glycerol into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the MIP/aquaporin (TC 1.A.8) family.


ensembl_gene_id: CL52_12710
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: CL52_12720
symbol: glpD-2
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; In Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: CL52_12725
symbol: AJE15854.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: CL52_12755
symbol: AJE15860.1
gene_biotype: protein_coding
description:
  Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12775
symbol: dgt
gene_biotype: protein_coding
description:
  Deoxyguanosinetriphosphate triphosphohydrolase; dGTPase preferentially hydrolyzes dGTP over the other canonical NTPs.


ensembl_gene_id: CL52_12795
symbol: AJE15868.1
gene_biotype: protein_coding
description:
  Universal stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12805
symbol: AJE15870.1
gene_biotype: protein_coding
description:
  Sodium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: CL52_12820
symbol: rpoS
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response.


ensembl_gene_id: CL52_12835
symbol: pcm
gene_biotype: protein_coding
description:
  protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.


ensembl_gene_id: CL52_12840
symbol: surE
gene_biotype: protein_coding
description:
  Stationary phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: CL52_12845
symbol: truD
gene_biotype: protein_coding
description:
  Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.


ensembl_gene_id: CL52_12850
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: CL52_12890
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: CL52_12895
symbol: ftsB
gene_biotype: protein_coding
description:
  Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: CL52_12900
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.


ensembl_gene_id: CL52_12905
symbol: kdsA
gene_biotype: protein_coding
description:
  2-dehydro-3-deoxyphosphooctonate aldolase; Catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the KdsA family.


ensembl_gene_id: CL52_12910
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: CL52_12915
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: CL52_12920
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: CL52_12925
symbol: AJE15892.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12940
symbol: lpxB
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: CL52_12945
symbol: lpxA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: CL52_12950
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-ACP dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: CL52_12955
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: CL52_12970
symbol: AJE15901.1
gene_biotype: protein_coding
description:
  Zinc metallopeptidase RseP; Catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_12975
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: CL52_12980
symbol: AJE15903.1
gene_biotype: protein_coding
description:
  Phosphatidate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDS family.


ensembl_gene_id: CL52_12985
symbol: uppS
gene_biotype: protein_coding
description:
  Farnesyl-diphosphate synthase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di- trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide.


ensembl_gene_id: CL52_12990
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: CL52_13000
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: CL52_13010
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: CL52_13015
symbol: glnD
gene_biotype: protein_coding
description:
  protein-PII uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.


ensembl_gene_id: CL52_13020
symbol: AJE15910.1
gene_biotype: protein_coding
description:
  Subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13040
symbol: AJE15914.1
gene_biotype: protein_coding
description:
  NADH-ubiquinone oxidoreductase subunit 4L; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13045
symbol: AJE15915.1
gene_biotype: protein_coding
description:
  Subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13060
symbol: pdxH
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).


ensembl_gene_id: CL52_13095
symbol: AJE15925.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0225 family.


ensembl_gene_id: CL52_13130
symbol: AJE15932.1
gene_biotype: protein_coding
description:
  Xylulose 5-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13140
symbol: AJE15934.1
gene_biotype: protein_coding
description:
  Cytochrome D ubiquinol oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13150
symbol: recA
gene_biotype: protein_coding
description:
  Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: CL52_13155
symbol: AJE15937.1
gene_biotype: protein_coding
description:
  Damage-inducible protein CinA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.


ensembl_gene_id: CL52_13160
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: CL52_13165
symbol: AJE15939.1
gene_biotype: protein_coding
description:
  Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: CL52_13170
symbol: AJE15940.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family.


ensembl_gene_id: CL52_13180
symbol: AJE15942.1
gene_biotype: protein_coding
description:
  Deacetylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13185
symbol: AJE15943.1
gene_biotype: protein_coding
description:
  Glycoside hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13190
symbol: AJE15944.1
gene_biotype: protein_coding
description:
  Ribonuclease BN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13195
symbol: AJE15945.1
gene_biotype: protein_coding
description:
  Glucose starvation-inducible protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13220
symbol: AJE15949.1
gene_biotype: protein_coding
description:
  Cellulase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13235
symbol: AJE15952.1
gene_biotype: protein_coding
description:
  GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CvfB family.


ensembl_gene_id: CL52_13255
symbol: AJE15956.1
gene_biotype: protein_coding
description:
  RNA-binding protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13305
symbol: AJE15965.1
gene_biotype: protein_coding
description:
  Peptidase S8 and S53 subtilisin kexin sedolisin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13320
symbol: AJE15968.1
gene_biotype: protein_coding
description:
  RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family.


ensembl_gene_id: CL52_13330
symbol: AJE15970.1
gene_biotype: protein_coding
description:
  3-phosphoglycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13365
symbol: AJE15976.1
gene_biotype: protein_coding
description:
  Agglutinin biogenesis protein MshP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13370
symbol: AJE15977.1
gene_biotype: protein_coding
description:
  Type II secretory pathway pseudopilin PulG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13385
symbol: AJE15980.1
gene_biotype: protein_coding
description:
  Mannose-sensitive hemagglutinin a; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13395
symbol: AJE15982.1
gene_biotype: protein_coding
description:
  MSHA biogenesis protein MshG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13405
symbol: AJE15983.1
gene_biotype: protein_coding
description:
  MSHA biogenesis protein MshE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13420
symbol: AJE15986.1
gene_biotype: protein_coding
description:
  Type II and III secretion system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13425
symbol: AJE15987.1
gene_biotype: protein_coding
description:
  Type II secretory pathway component; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13430
symbol: AJE15988.1
gene_biotype: protein_coding
description:
  MSHA biogenesis protein MshJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13435
symbol: AJE15989.1
gene_biotype: protein_coding
description:
  MSHA biogenesis protein MshI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13445
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: CL52_13455
symbol: AJE15993.1
gene_biotype: protein_coding
description:
  4-hydroxybenzoyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13480
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).


ensembl_gene_id: CL52_13495
symbol: AJE15997.1
gene_biotype: protein_coding
description:
  DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.


ensembl_gene_id: CL52_13500
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: CL52_13505
symbol: AJE15999.1
gene_biotype: protein_coding
description:
  Aromatic amino acid aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13545
symbol: AJE16004.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13550
symbol: AJE16005.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13570
symbol: AJE16009.1
gene_biotype: protein_coding
description:
  Recombinase RmuC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13600
symbol: AJE16015.1
gene_biotype: protein_coding
description:
  isoleucyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13610
symbol: AJE16017.1
gene_biotype: protein_coding
description:
  Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13615
symbol: AJE16018.1
gene_biotype: protein_coding
description:
  Peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13635
symbol: AJE16022.1
gene_biotype: protein_coding
description:
  Sulfate ABC transporter permease; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: CL52_13640
symbol: AJE16023.1
gene_biotype: protein_coding
description:
  Sulfate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13645
symbol: cysA
gene_biotype: protein_coding
description:
  Sulfate ABC transporter ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.


ensembl_gene_id: CL52_13650
symbol: AJE16025.1
gene_biotype: protein_coding
description:
  Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13670
symbol: AJE16029.1
gene_biotype: protein_coding
description:
  Molybdopterin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: CL52_13675
symbol: AJE16030.1
gene_biotype: protein_coding
description:
  Hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13700
symbol: AJE16033.1
gene_biotype: protein_coding
description:
  Electron transporter SenC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13710
symbol: AJE16035.1
gene_biotype: protein_coding
description:
  Cytochrome C oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: CL52_13720
symbol: AJE16036.1
gene_biotype: protein_coding
description:
  Oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13725
symbol: AJE16037.1
gene_biotype: protein_coding
description:
  Flavodoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13740
symbol: purC
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole-succinocarboxamide synthase; Catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13750
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: CL52_13755
symbol: AJE16042.1
gene_biotype: protein_coding
description:
  Glycine cleavage system protein R; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13765
symbol: AJE16044.1
gene_biotype: protein_coding
description:
  Response regulator SirA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: CL52_13770
symbol: AJE16045.1
gene_biotype: protein_coding
description:
  Peptidase M48; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state.


ensembl_gene_id: CL52_13775
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate; Belongs to the quinolinate synthase A family. Type 1 subfamily.


ensembl_gene_id: CL52_13780
symbol: AJE16047.1
gene_biotype: protein_coding
description:
  acetyl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13790
symbol: queC
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: CL52_13795
symbol: queE
gene_biotype: protein_coding
description:
  7-carboxy-7-deazaguanine synthase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: CL52_13800
symbol: cpoB
gene_biotype: protein_coding
description:
  Hypothetical protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.


ensembl_gene_id: CL52_13805
symbol: pal
gene_biotype: protein_coding
description:
  Peptidoglycan-binding protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: CL52_13810
symbol: tolB
gene_biotype: protein_coding
description:
  Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: CL52_13815
symbol: AJE16053.1
gene_biotype: protein_coding
description:
  Cell envelope biogenesis protein TolA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13835
symbol: ruvB
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: CL52_13840
symbol: ruvA
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: CL52_13845
symbol: ruvC
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: CL52_13855
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: CL52_13860
symbol: AJE16062.1
gene_biotype: protein_coding
description:
  Ferritin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family.


ensembl_gene_id: CL52_13870
symbol: slyX
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SlyX family.


ensembl_gene_id: CL52_13875
symbol: AJE16065.1
gene_biotype: protein_coding
description:
  Histidine triad (HIT) protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13885
symbol: proS
gene_biotype: protein_coding
description:
  proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacy [...]


ensembl_gene_id: CL52_13895
symbol: AJE16069.1
gene_biotype: protein_coding
description:
  Transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13920
symbol: AJE16074.1
gene_biotype: protein_coding
description:
  Arsenate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13925
symbol: AJE16075.1
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WrbA family.


ensembl_gene_id: CL52_13940
symbol: AJE16078.1
gene_biotype: protein_coding
description:
  Controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DnaA family. HdA subfamily.


ensembl_gene_id: CL52_13955
symbol: purM
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole synthetase; Catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13960
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: CL52_13975
symbol: AJE16085.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_13995
symbol: AJE16088.1
gene_biotype: protein_coding
description:
  ArsC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ArsC family.


ensembl_gene_id: CL52_14000
symbol: dapD
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA.


ensembl_gene_id: CL52_14005
symbol: AJE16090.1
gene_biotype: protein_coding
description:
  Cysteine sulfinate desulfinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_14010
symbol: AJE16091.1
gene_biotype: protein_coding
description:
  Fe-S metabolism protein SufE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_14015
symbol: AJE16092.1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_14040
symbol: AJE16095.1
gene_biotype: protein_coding
description:
  Ankyrin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_14065
symbol: AJE16100.1
gene_biotype: protein_coding
description:
  Glutamate:proton symporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: CL52_14070
symbol: AJE16101.1
gene_biotype: protein_coding
description:
  Elongation factor GreAB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_14075
symbol: AJE16102.1
gene_biotype: protein_coding
description:
  Potassium transporter TrkA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_14105
symbol: AJE16108.1
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_14140
symbol: AJE16114.1
gene_biotype: protein_coding
description:
  HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_14145
symbol: AJE16115.1
gene_biotype: protein_coding
description:
  Glutamate carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_14160
symbol: AJE16118.1
gene_biotype: protein_coding
description:
  3-demethylubiquinone-9 3-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: CL52_14170
symbol: rnz
gene_biotype: protein_coding
description:
  Beta-lactamase; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.


ensembl_gene_id: CL52_14200
symbol: AJE16126.1
gene_biotype: protein_coding
description:
  Transcriptional initiation protein Tat; Derived by automated computational analysis using gene prediction method: Protein Homology.


