# geneInfo

ensembl_gene_id: SAMN02745784_00004
symbol: SHE27134.1
gene_biotype: protein_coding
description:
  Na+-transporting NADH:ubiquinone oxidoreductase subunit B; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: SAMN02745784_00005
symbol: rnfG
gene_biotype: protein_coding
description:
  Na+-transporting NADH:ubiquinone oxidoreductase subunit C; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.


ensembl_gene_id: SAMN02745784_00007
symbol: rnfA
gene_biotype: protein_coding
description:
  Na+-transporting NADH:ubiquinone oxidoreductase subunit E; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: SAMN02745784_00011
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: SAMN02745784_00014
symbol: SHE27194.1
gene_biotype: protein_coding
description:
  Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.


ensembl_gene_id: SAMN02745784_00025
symbol: SHE27270.1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridine955/2504/2580 synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: SAMN02745784_00049
symbol: nadK
gene_biotype: protein_coding
description:
  NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: SAMN02745784_00050
symbol: SHE27464.1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridine1911/1915/1917 synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: SAMN02745784_00061
symbol: SHE27544.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter membrane protein 1, PhoT family; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: SAMN02745784_00063
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: SAMN02745784_00070
symbol: SHE27614.1
gene_biotype: protein_coding
description:
  Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: SAMN02745784_00077
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.


ensembl_gene_id: SAMN02745784_00078
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: SAMN02745784_00082
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: SAMN02745784_00083
symbol: rnfC
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.


ensembl_gene_id: SAMN02745784_00084
symbol: rnfD
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: SAMN02745784_00085
symbol: rnfG-2
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.


ensembl_gene_id: SAMN02745784_00086
symbol: rnfE
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfE; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: SAMN02745784_00087
symbol: rnfA-2
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: SAMN02745784_00088
symbol: rnfB
gene_biotype: protein_coding
description:
  Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.


ensembl_gene_id: SAMN02745784_00091
symbol: SHE27767.1
gene_biotype: protein_coding
description:
  Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: SAMN02745784_00097
symbol: minC
gene_biotype: protein_coding
description:
  Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: SAMN02745784_00099
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: SAMN02745784_00101
symbol: SHE27848.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: SAMN02745784_00106
symbol: rplU
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: SAMN02745784_00109
symbol: obg
gene_biotype: protein_coding
description:
  GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: SAMN02745784_00112
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: SAMN02745784_00114
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: SAMN02745784_00116
symbol: SHE27985.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.


ensembl_gene_id: SAMN02745784_00119
symbol: selA
gene_biotype: protein_coding
description:
  L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.


ensembl_gene_id: SAMN02745784_00126
symbol: SHE28075.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: SAMN02745784_00135
symbol: SHE28186.1
gene_biotype: protein_coding
description:
  Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745784_00140
symbol: rbsK
gene_biotype: protein_coding
description:
  Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: SAMN02745784_00151
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: SAMN02745784_00152
symbol: SHE28405.1
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen-3 oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: SAMN02745784_00153
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: SAMN02745784_00154
symbol: grpE
gene_biotype: protein_coding
description:
  Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...]


ensembl_gene_id: SAMN02745784_00156
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: SAMN02745784_00157
symbol: prmA
gene_biotype: protein_coding
description:
  [LSU ribosomal protein L11P]-lysine N-methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: SAMN02745784_00158
symbol: SHE28498.1
gene_biotype: protein_coding
description:
  16S rRNA (uracil1498-N3)-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: SAMN02745784_00169
symbol: ybeY
gene_biotype: protein_coding
description:
  Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: SAMN02745784_00172
symbol: SHE28686.1
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN02745784_00173
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: SAMN02745784_00178
symbol: SHE28761.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: SAMN02745784_00180
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: SAMN02745784_00181
symbol: sigA
gene_biotype: protein_coding
description:
  RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: SAMN02745784_00189
symbol: SHE28915.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: SAMN02745784_00190
symbol: sepF
gene_biotype: protein_coding
description:
  Cell division inhibitor SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: SAMN02745784_00196
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: SAMN02745784_00198
symbol: pyrR
gene_biotype: protein_coding
description:
  Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.


ensembl_gene_id: SAMN02745784_00206
symbol: iscS
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.


ensembl_gene_id: SAMN02745784_00210
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: SAMN02745784_00214
symbol: SHE29303.1
gene_biotype: protein_coding
description:
  Putative holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: SAMN02745784_00217
symbol: rnj
gene_biotype: protein_coding
description:
  Ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: SAMN02745784_00221
symbol: mltG
gene_biotype: protein_coding
description:
  UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: SAMN02745784_00226
symbol: SHE29520.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 27/28 subunit, RpsK/SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02745784_00228
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: SAMN02745784_00234
symbol: SHE29666.1
gene_biotype: protein_coding
description:
  Type 4 prepilin peptidase 1. Aspartic peptidase. MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: SAMN02745784_00247
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: SAMN02745784_00248
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: SAMN02745784_00249
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: SAMN02745784_00261
symbol: nusB
gene_biotype: protein_coding
description:
  NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: SAMN02745784_00262
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: SAMN02745784_00263
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: SAMN02745784_00273
symbol: SHE30430.1
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase.


ensembl_gene_id: SAMN02745784_00277
symbol: xerC
gene_biotype: protein_coding
description:
  Integrase/recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: SAMN02745784_00278
symbol: SHE30544.1
gene_biotype: protein_coding
description:
  Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: SAMN02745784_00282
symbol: scpA
gene_biotype: protein_coding
description:
  Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: SAMN02745784_00283
symbol: scpB
gene_biotype: protein_coding
description:
  Condensin subunit ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: SAMN02745784_00287
symbol: SHE30735.1
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: SAMN02745784_00298
symbol: SHE31022.1
gene_biotype: protein_coding
description:
  Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.


ensembl_gene_id: SAMN02745784_00300
symbol: SHE31077.1
gene_biotype: protein_coding
description:
  1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: SAMN02745784_00301
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: SAMN02745784_00309
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: SAMN02745784_00310
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: SAMN02745784_00311
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: SAMN02745784_00312
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: SAMN02745784_00313
symbol: hfq
gene_biotype: protein_coding
description:
  RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: SAMN02745784_00315
symbol: lexA
gene_biotype: protein_coding
description:
  SOS-response transcriptional repressor, LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: SAMN02745784_00327
symbol: recA
gene_biotype: protein_coding
description:
  RecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: SAMN02745784_00329
symbol: SHE31753.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN02745784_00330
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: SAMN02745784_00334
symbol: dut
gene_biotype: protein_coding
description:
  dUTP pyrophosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: SAMN02745784_00337
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: SAMN02745784_00338
symbol: rpsO
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: SAMN02745784_00340
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine55 synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: SAMN02745784_00342
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: SAMN02745784_00343
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: SAMN02745784_00346
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: SAMN02745784_00347
symbol: polC
gene_biotype: protein_coding
description:
  DNA polymerase III catalytic subunit, PolC type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN02745784_00348
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: SAMN02745784_00351
symbol: SHE32303.1
gene_biotype: protein_coding
description:
  Undecaprenyl diphosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: SAMN02745784_00352
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: SAMN02745784_00354
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: SAMN02745784_00360
symbol: cheD
gene_biotype: protein_coding
description:
  Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: SAMN02745784_00366
symbol: SHE32664.1
gene_biotype: protein_coding
description:
  CheB methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: SAMN02745784_00370
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: SAMN02745784_00371
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: SAMN02745784_00372
symbol: SHE32795.1
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: SAMN02745784_00373
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: SAMN02745784_00374
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: SAMN02745784_00379
symbol: SHE32960.1
gene_biotype: protein_coding
description:
  Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: SAMN02745784_00392
symbol: SHE33269.1
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: SAMN02745784_00395
symbol: SHE33342.1
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: SAMN02745784_00396
symbol: codY
gene_biotype: protein_coding
description:
  Transcriptional pleiotropic repressor; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family.


ensembl_gene_id: SAMN02745784_00397
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: SAMN02745784_00404
symbol: SHE33605.1
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: SAMN02745784_00405
symbol: rplS
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: SAMN02745784_00406
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine37-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: SAMN02745784_00407
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: SAMN02745784_00410
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: SAMN02745784_00411
symbol: SHE33772.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.


ensembl_gene_id: SAMN02745784_00416
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: SAMN02745784_00417
symbol: smc
gene_biotype: protein_coding
description:
  Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: SAMN02745784_00419
symbol: rnc
gene_biotype: protein_coding
description:
  RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: SAMN02745784_00421
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate:acyl-[acyl carrier protein] acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: SAMN02745784_00424
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: SAMN02745784_00425
symbol: tmcAL
gene_biotype: protein_coding
description:
  Predicted nucleotidyltransferase; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.


ensembl_gene_id: SAMN02745784_00428
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: SAMN02745784_00430
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN02745784_00438
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: SAMN02745784_00441
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: SAMN02745784_00442
symbol: SHE34482.1
gene_biotype: protein_coding
description:
  NusB antitermination factor; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: SAMN02745784_00444
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: SAMN02745784_00445
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: SAMN02745784_00446
symbol: priA
gene_biotype: protein_coding
description:
  Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: SAMN02745784_00447
symbol: SHE34604.1
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: SAMN02745784_00448
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: SAMN02745784_00452
symbol: SHE34728.1
gene_biotype: protein_coding
description:
  Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains.


ensembl_gene_id: SAMN02745784_00463
symbol: thiC
gene_biotype: protein_coding
description:
  Hydroxymethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.


ensembl_gene_id: SAMN02745784_00491
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: SAMN02745784_00493
symbol: SHE35654.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma subunit, RpsG/SigG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02745784_00494
symbol: SHE35675.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 29 subunit, SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02745784_00495
symbol: SHE35700.1
gene_biotype: protein_coding
description:
  Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.


ensembl_gene_id: SAMN02745784_00496
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: SAMN02745784_00501
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: SAMN02745784_00502
symbol: murG
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: SAMN02745784_00504
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: SAMN02745784_00505
symbol: mraY
gene_biotype: protein_coding
description:
  Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: SAMN02745784_00506
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: SAMN02745784_00509
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA (cytosine1402-N4)-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: SAMN02745784_00511
symbol: lgt
gene_biotype: protein_coding
description:
  Phosphatidylglycerol:prolipoprotein diacylglycerol transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: SAMN02745784_00515
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: SAMN02745784_00516
symbol: SHE36176.1
gene_biotype: protein_coding
description:
  Putative phosphotransacetylase; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.


ensembl_gene_id: SAMN02745784_00517
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: SAMN02745784_00518
symbol: SHE36224.1
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: SAMN02745784_00519
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: SAMN02745784_00531
symbol: nadE
gene_biotype: protein_coding
description:
  NAD+ synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.


ensembl_gene_id: SAMN02745784_00537
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: SAMN02745784_00545
symbol: SHE36858.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma subunit, RpoX/SigF; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02745784_00559
symbol: SHE40808.1
gene_biotype: protein_coding
description:
  Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: SAMN02745784_00561
symbol: ychF
gene_biotype: protein_coding
description:
  Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: SAMN02745784_00576
symbol: phnC
gene_biotype: protein_coding
description:
  Phosphonate transport system ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.


ensembl_gene_id: SAMN02745784_00604
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: SAMN02745784_00607
symbol: SHE42079.1
gene_biotype: protein_coding
description:
  [methyl-Co(III) methanol-specific corrinoid protein]:coenzyme M methyltransferase; Belongs to the uroporphyrinogen decarboxylase family.


ensembl_gene_id: SAMN02745784_00616
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: SAMN02745784_00617
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: SAMN02745784_00618
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: SAMN02745784_00620
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.


ensembl_gene_id: SAMN02745784_00621
symbol: SHE42420.1
gene_biotype: protein_coding
description:
  Cyclase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: SAMN02745784_00638
symbol: SHE42850.1
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: SAMN02745784_00660
symbol: metAA
gene_biotype: protein_coding
description:
  Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.


ensembl_gene_id: SAMN02745784_00664
symbol: SHE43520.1
gene_biotype: protein_coding
description:
  Manganese/zinc/iron transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: SAMN02745784_00671
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: SAMN02745784_00674
symbol: mntP
gene_biotype: protein_coding
description:
  Putative Mn2+ efflux pump MntP; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.


ensembl_gene_id: SAMN02745784_00677
symbol: SHE43849.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: SAMN02745784_00679
symbol: SHE43908.1
gene_biotype: protein_coding
description:
  Glutamate--cysteine ligase; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). Belongs to the glutamate--cysteine ligase type 2 family. EgtA subfamily.


ensembl_gene_id: SAMN02745784_00680
symbol: SHE43931.1
gene_biotype: protein_coding
description:
  Diaminopimelate dehydrogenase; Catalyzes the reversible NADPH-dependent reductive amination of L-2-amino-6-oxopimelate, the acyclic form of L- tetrahydrodipicolinate, to generate the meso compound, D,L-2,6- diaminopimelate.


ensembl_gene_id: SAMN02745784_00688
symbol: SHE44132.1
gene_biotype: protein_coding
description:
  Barrel-sandwich domain of CusB or HlyD membrane-fusion; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN02745784_00695
symbol: SHE44308.1
gene_biotype: protein_coding
description:
  4-hydroxy-2-oxoglutarate aldolase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: SAMN02745784_00696
symbol: SHE44330.1
gene_biotype: protein_coding
description:
  Na+/H+-dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: SAMN02745784_00699
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: SAMN02745784_00710
symbol: SHE44673.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma-70 factor, TIGR02954 family; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: SAMN02745784_00719
symbol: ung
gene_biotype: protein_coding
description:
  Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: SAMN02745784_00732
symbol: SHE45180.1
gene_biotype: protein_coding
description:
  Formate dehydrogenase major subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02745784_00737
symbol: mobA
gene_biotype: protein_coding
description:
  Molybdenum cofactor guanylyltransferase; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.


ensembl_gene_id: SAMN02745784_00739
symbol: SHE45337.1
gene_biotype: protein_coding
description:
  Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: SAMN02745784_00743
symbol: SHE45419.1
gene_biotype: protein_coding
description:
  Molydopterin dinucleotide binding domain-containing protein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02745784_00746
symbol: tatA
gene_biotype: protein_coding
description:
  Sec-independent protein translocase TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: SAMN02745784_00751
symbol: SHE45611.1
gene_biotype: protein_coding
description:
  Probable molybdopterin binding domain-containing protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN02745784_00752
symbol: SHE45634.1
gene_biotype: protein_coding
description:
  Molybdopterin molybdochelatase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN02745784_00755
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.


ensembl_gene_id: SAMN02745784_00756
symbol: moaA
gene_biotype: protein_coding
description:
  Cyclic pyranopterin phosphate synthase; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: SAMN02745784_00757
symbol: moaC
gene_biotype: protein_coding
description:
  Cyclic pyranopterin phosphate synthase; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: SAMN02745784_00758
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA-specific 2-thiouridylase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: SAMN02745784_00763
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: SAMN02745784_00769
symbol: SHE45996.1
gene_biotype: protein_coding
description:
  Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745784_00770
symbol: SHE46015.1
gene_biotype: protein_coding
description:
  Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745784_00792
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: SAMN02745784_00825
symbol: SHE47276.1
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: SAMN02745784_00835
symbol: fni
gene_biotype: protein_coding
description:
  Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).


ensembl_gene_id: SAMN02745784_00836
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: SAMN02745784_00837
symbol: dapA
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: SAMN02745784_00838
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: SAMN02745784_00839
symbol: birA
gene_biotype: protein_coding
description:
  Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: SAMN02745784_00840
symbol: SHE47628.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid:cation transporter, LIVCS family; Component of the transport system for branched-chain amino acids.


ensembl_gene_id: SAMN02745784_00848
symbol: glyA
gene_biotype: protein_coding
description:
  Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: SAMN02745784_00852
symbol: mprF
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.


ensembl_gene_id: SAMN02745784_00883
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: SAMN02745784_00949
symbol: SHE50054.1
gene_biotype: protein_coding
description:
  CRISPR-associated exonuclease Cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.


ensembl_gene_id: SAMN02745784_00950
symbol: cas1
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Cas1 family; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: SAMN02745784_00951
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Cas2 family; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: SAMN02745784_00959
symbol: SHE53241.1
gene_biotype: protein_coding
description:
  23S rRNA (uracil-5-)-methyltransferase RumA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: SAMN02745784_01052
symbol: SHE55374.1
gene_biotype: protein_coding
description:
  Regulator of cell morphogenesis and NO signaling; Di-iron-containing protein involved in the repair of iron- sulfur clusters; Belongs to the RIC family.


ensembl_gene_id: SAMN02745784_01055
symbol: SHE55440.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: SAMN02745784_01057
symbol: SHE55487.1
gene_biotype: protein_coding
description:
  FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase.


ensembl_gene_id: SAMN02745784_01069
symbol: mscL
gene_biotype: protein_coding
description:
  Large conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: SAMN02745784_01078
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: SAMN02745784_01080
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: SAMN02745784_01088
symbol: SHE56154.1
gene_biotype: protein_coding
description:
  Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.


ensembl_gene_id: SAMN02745784_01096
symbol: ubiX
gene_biotype: protein_coding
description:
  4-hydroxy-3-polyprenylbenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: SAMN02745784_01104
symbol: ade
gene_biotype: protein_coding
description:
  Adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.


ensembl_gene_id: SAMN02745784_01118
symbol: SHE56757.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745784_01130
symbol: SHE57010.1
gene_biotype: protein_coding
description:
  Putative SOS response-associated peptidase YedK; Belongs to the SOS response-associated peptidase family.


ensembl_gene_id: SAMN02745784_01155
symbol: nnrE
gene_biotype: protein_coding
description:
  yjeF N-terminal region; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX; Belongs to the NnrE/AIBP family.


ensembl_gene_id: SAMN02745784_01160
symbol: xpt
gene_biotype: protein_coding
description:
  Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.


ensembl_gene_id: SAMN02745784_01161
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: SAMN02745784_01177
symbol: glmU
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: SAMN02745784_01178
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: SAMN02745784_01179
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase, PTH1 family; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: SAMN02745784_01180
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN02745784_01185
symbol: SHE58255.1
gene_biotype: protein_coding
description:
  DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: SAMN02745784_01192
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: SAMN02745784_01193
symbol: SHE58456.1
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: SAMN02745784_01194
symbol: ftsH
gene_biotype: protein_coding
description:
  Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: SAMN02745784_01200
symbol: SHE58638.1
gene_biotype: protein_coding
description:
  Sodium pump decarboxylases, gamma subunit; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the OadG family.


ensembl_gene_id: SAMN02745784_01202
symbol: SHE58680.1
gene_biotype: protein_coding
description:
  glutaconyl-CoA decarboxylase beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).


ensembl_gene_id: SAMN02745784_01205
symbol: coaX
gene_biotype: protein_coding
description:
  Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: SAMN02745784_01206
symbol: SHE58790.1
gene_biotype: protein_coding
description:
  Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: SAMN02745784_01208
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: SAMN02745784_01252
symbol: SHE61588.1
gene_biotype: protein_coding
description:
  23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: SAMN02745784_01257
symbol: topB
gene_biotype: protein_coding
description:
  DNA topoisomerase-3; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: SAMN02745784_01261
symbol: SHE61830.1
gene_biotype: protein_coding
description:
  neurotransmitter:Na+ symporter, NSS family; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.


ensembl_gene_id: SAMN02745784_01275
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: SAMN02745784_01283
symbol: SHE62359.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, cofD-related; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.


ensembl_gene_id: SAMN02745784_01289
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: SAMN02745784_01297
symbol: SHE62727.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: SAMN02745784_01301
symbol: nagB
gene_biotype: protein_coding
description:
  Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.


ensembl_gene_id: SAMN02745784_01349
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: SAMN02745784_01360
symbol: mtaD
gene_biotype: protein_coding
description:
  5-methylthioadenosine/S-adenosylhomocysteine deaminase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family.


ensembl_gene_id: SAMN02745784_01364
symbol: rpsD
gene_biotype: protein_coding
description:
  SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: SAMN02745784_01370
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: SAMN02745784_01371
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: SAMN02745784_01374
symbol: SHE64577.1
gene_biotype: protein_coding
description:
  C-terminal processing peptidase-3. Serine peptidase. MEROPS family S41A; Belongs to the peptidase S41A family.


ensembl_gene_id: SAMN02745784_01383
symbol: SHE64766.1
gene_biotype: protein_coding
description:
  Cell division protein FtsX; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: SAMN02745784_01384
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: SAMN02745784_01393
symbol: SHE64975.1
gene_biotype: protein_coding
description:
  N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.


ensembl_gene_id: SAMN02745784_01400
symbol: SHE65124.1
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: SAMN02745784_01406
symbol: acpS
gene_biotype: protein_coding
description:
  NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the NnrD/CARKD family. In the C-terminal section; belongs to the NnrD/CARKD family.


ensembl_gene_id: SAMN02745784_01409
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: SAMN02745784_01411
symbol: pyrK
gene_biotype: protein_coding
description:
  Dihydroorotate oxidase B, electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).


ensembl_gene_id: SAMN02745784_01413
symbol: SHE65386.1
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: SAMN02745784_01415
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: SAMN02745784_01420
symbol: metN
gene_biotype: protein_coding
description:
  D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: SAMN02745784_01440
symbol: rsmA
gene_biotype: protein_coding
description:
  16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: SAMN02745784_01441
symbol: rnmV
gene_biotype: protein_coding
description:
  RNAse M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.


ensembl_gene_id: SAMN02745784_01444
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: SAMN02745784_01447
symbol: SHE68068.1
gene_biotype: protein_coding
description:
  PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein/HDIG domain-containing protein.


ensembl_gene_id: SAMN02745784_01450
symbol: rsmI
gene_biotype: protein_coding
description:
  16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: SAMN02745784_01452
symbol: SHE68190.1
gene_biotype: protein_coding
description:
  4Fe-4S dicluster domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: SAMN02745784_01457
symbol: tmk
gene_biotype: protein_coding
description:
  dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: SAMN02745784_01460
symbol: rplY
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: SAMN02745784_01464
symbol: SHE68509.1
gene_biotype: protein_coding
description:
  Putative peptidoglycan lipid II flippase; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: SAMN02745784_01476
symbol: pepA
gene_biotype: protein_coding
description:
  Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: SAMN02745784_01488
symbol: SHE69093.1
gene_biotype: protein_coding
description:
  Alginate O-acetyltransferase complex protein AlgI; Belongs to the membrane-bound acyltransferase family.


ensembl_gene_id: SAMN02745784_01510
symbol: mtnA
gene_biotype: protein_coding
description:
  Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: SAMN02745784_01540
symbol: recR
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: SAMN02745784_01541
symbol: SHE70378.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: SAMN02745784_01542
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN02745784_01546
symbol: SHE70482.1
gene_biotype: protein_coding
description:
  Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: SAMN02745784_01554
symbol: clpB
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: SAMN02745784_01565
symbol: SHE70962.1
gene_biotype: protein_coding
description:
  Glycine dehydrogenase subunit 1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: SAMN02745784_01571
symbol: SHE71119.1
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: SAMN02745784_01590
symbol: atpD
gene_biotype: protein_coding
description:
  V/A-type H+-transporting ATPase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: SAMN02745784_01591
symbol: atpB
gene_biotype: protein_coding
description:
  V/A-type H+-transporting ATPase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.


ensembl_gene_id: SAMN02745784_01592
symbol: atpA
gene_biotype: protein_coding
description:
  V/A-type H+-transporting ATPase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: SAMN02745784_01602
symbol: SHE71819.1
gene_biotype: protein_coding
description:
  Indolepyruvate ferredoxin oxidoreductase alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.


ensembl_gene_id: SAMN02745784_01608
symbol: SHE71930.1
gene_biotype: protein_coding
description:
  Putative spermidine/putrescine transport system ATP-binding protein; Belongs to the ABC transporter superfamily.


ensembl_gene_id: SAMN02745784_01614
symbol: SHE72054.1
gene_biotype: protein_coding
description:
  ABC-type Fe3+/spermidine/putrescine transport systems, ATPase components; Belongs to the ABC transporter superfamily.


ensembl_gene_id: SAMN02745784_01636
symbol: SHE74368.1
gene_biotype: protein_coding
description:
  tRNA (cytidine/uridine-2'-O-)-methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: SAMN02745784_01639
symbol: SHE74431.1
gene_biotype: protein_coding
description:
  methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: SAMN02745784_01643
symbol: nth
gene_biotype: protein_coding
description:
  DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: SAMN02745784_01645
symbol: SHE74569.1
gene_biotype: protein_coding
description:
  2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.


ensembl_gene_id: SAMN02745784_01647
symbol: nfo
gene_biotype: protein_coding
description:
  Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.


ensembl_gene_id: SAMN02745784_01657
symbol: SHE74828.1
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: SAMN02745784_01672
symbol: SHE75160.1
gene_biotype: protein_coding
description:
  Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.


ensembl_gene_id: SAMN02745784_01677
symbol: map
gene_biotype: protein_coding
description:
  Methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: SAMN02745784_01703
symbol: pepT
gene_biotype: protein_coding
description:
  Peptidase T. Metallo peptidase. MEROPS family M20B; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.


ensembl_gene_id: SAMN02745784_01706
symbol: SHE75880.1
gene_biotype: protein_coding
description:
  Cardiolipin synthetase 2; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.


ensembl_gene_id: SAMN02745784_01711
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: SAMN02745784_01712
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent proteinase. Serine peptidase. MEROPS family S16; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: SAMN02745784_01713
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: SAMN02745784_01714
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: SAMN02745784_01715
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: SAMN02745784_01718
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: SAMN02745784_01722
symbol: SHE76193.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: SAMN02745784_01724
symbol: SHE76231.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN02745784_01727
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: SAMN02745784_01728
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: SAMN02745784_01739
symbol: dacA
gene_biotype: protein_coding
description:
  Diadenylate cyclase; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: SAMN02745784_01741
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: SAMN02745784_01745
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: SAMN02745784_01746
symbol: rnz
gene_biotype: protein_coding
description:
  RNAse Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.


ensembl_gene_id: SAMN02745784_01749
symbol: SHE76760.1
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SAMN02745784_01758
symbol: SHE76862.1
gene_biotype: protein_coding
description:
  XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: SAMN02745784_01769
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: SAMN02745784_01770
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: SAMN02745784_01771
symbol: gatC
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: SAMN02745784_01772
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: SAMN02745784_01782
symbol: purN
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: SAMN02745784_01784
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: SAMN02745784_01785
symbol: purE
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: SAMN02745784_01799
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: SAMN02745784_01800
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: SAMN02745784_01846
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: SAMN02745784_01847
symbol: atpD-2
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: SAMN02745784_01848
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: SAMN02745784_01849
symbol: atpA-2
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: SAMN02745784_01850
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN02745784_01851
symbol: atpF
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: SAMN02745784_01852
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN02745784_01853
symbol: atpB-2
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: SAMN02745784_01860
symbol: SHE80626.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: SAMN02745784_01862
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: SAMN02745784_01864
symbol: SHE80735.1
gene_biotype: protein_coding
description:
  Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: SAMN02745784_01865
symbol: SHE80762.1
gene_biotype: protein_coding
description:
  Translation factor SUA5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: SAMN02745784_01869
symbol: prfA
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 1 (bRF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: SAMN02745784_01872
symbol: prmC
gene_biotype: protein_coding
description:
  Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: SAMN02745784_01875
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: SAMN02745784_01877
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: SAMN02745784_01890
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: SAMN02745784_01909
symbol: SHE81859.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 2, HAAT family (TC 3.A.1.4.-); Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745784_01910
symbol: SHE81888.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-); Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745784_01913
symbol: allB
gene_biotype: protein_coding
description:
  Allantoinase; Catalyzes the conversion of allantoin (5-ureidohydantoin) to allantoic acid by hydrolytic cleavage of the five-member hydantoin ring; Belongs to the metallo-dependent hydrolases superfamily. Allantoinase family.


ensembl_gene_id: SAMN02745784_01919
symbol: SHE82101.1
gene_biotype: protein_coding
description:
  Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: SAMN02745784_01954
symbol: SHE82913.1
gene_biotype: protein_coding
description:
  2',3'-cyclic-nucleotide 2'-phosphodiesterase / 3'-nucleotidase; Belongs to the 5'-nucleotidase family.


ensembl_gene_id: SAMN02745784_01971
symbol: hslO
gene_biotype: protein_coding
description:
  Molecular chaperone Hsp33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: SAMN02745784_01982
symbol: SHE84557.1
gene_biotype: protein_coding
description:
  Dihydrofolate synthase / folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: SAMN02745784_01983
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: SAMN02745784_01992
symbol: polC-2
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit alpha; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN02745784_01995
symbol: SHE84826.1
gene_biotype: protein_coding
description:
  Fur family transcriptional regulator, peroxide stress response regulator; Belongs to the Fur family.


ensembl_gene_id: SAMN02745784_02008
symbol: SHE85112.1
gene_biotype: protein_coding
description:
  Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.


ensembl_gene_id: SAMN02745784_02010
symbol: SHE85155.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: SAMN02745784_02019
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: SAMN02745784_02021
symbol: cobT
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: SAMN02745784_02029
symbol: cbiD
gene_biotype: protein_coding
description:
  Cobalt-precorrin 5B C1-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.


ensembl_gene_id: SAMN02745784_02035
symbol: SHE85699.1
gene_biotype: protein_coding
description:
  Cobalt/nickel transport system ATP-binding protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.


ensembl_gene_id: SAMN02745784_02037
symbol: cbiN
gene_biotype: protein_coding
description:
  Cobalt/nickel transport protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.


ensembl_gene_id: SAMN02745784_02038
symbol: cbiM
gene_biotype: protein_coding
description:
  Cobalt/nickel transport system permease protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.


ensembl_gene_id: SAMN02745784_02040
symbol: cobD
gene_biotype: protein_coding
description:
  Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: SAMN02745784_02041
symbol: cobQ
gene_biotype: protein_coding
description:
  Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: SAMN02745784_02043
symbol: mprF-2
gene_biotype: protein_coding
description:
  Phosphatidylglycerol lysyltransferase; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.


ensembl_gene_id: SAMN02745784_02064
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: SAMN02745784_02065
symbol: recD2
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase, RecD/TraA family; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.


ensembl_gene_id: SAMN02745784_02073
symbol: fliW
gene_biotype: protein_coding
description:
  Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.


ensembl_gene_id: SAMN02745784_02074
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: SAMN02745784_02081
symbol: SHE87541.1
gene_biotype: protein_coding
description:
  UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: SAMN02745784_02119
symbol: SHE88454.1
gene_biotype: protein_coding
description:
  Monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-); Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745784_02124
symbol: panB
gene_biotype: protein_coding
description:
  Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: SAMN02745784_02131
symbol: SHE88737.1
gene_biotype: protein_coding
description:
  Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: SAMN02745784_02219
symbol: SHE91999.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid uptake carrier; Component of the transport system for branched-chain amino acids.


ensembl_gene_id: SAMN02745784_02220
symbol: SHE92028.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport protein; Component of the transport system for branched-chain amino acids.


ensembl_gene_id: SAMN02745784_02269
symbol: SHE93142.1
gene_biotype: protein_coding
description:
  Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family.


ensembl_gene_id: SAMN02745784_02301
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: SAMN02745784_02302
symbol: groS
gene_biotype: protein_coding
description:
  Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: SAMN02745784_02303
symbol: SHE94679.1
gene_biotype: protein_coding
description:
  Isoaspartyl dipeptidase. Metallo peptidase. MEROPS family M38; Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation.


ensembl_gene_id: SAMN02745784_02315
symbol: SHE94955.1
gene_biotype: protein_coding
description:
  NAD(P)H-dependent nitrate reductase catalytic subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02745784_02316
symbol: SHE94988.1
gene_biotype: protein_coding
description:
  Anaerobic sulfite reductase subunit C; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: SAMN02745784_02327
symbol: rex
gene_biotype: protein_coding
description:
  Redox-sensing transcriptional repressor; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: SAMN02745784_02330
symbol: tsaD
gene_biotype: protein_coding
description:
  N6-L-threonylcarbamoyladenine synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: SAMN02745784_02331
symbol: SHE95312.1
gene_biotype: protein_coding
description:
  Ribosomal-protein-alanine N-acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.


ensembl_gene_id: SAMN02745784_02343
symbol: SHE95592.1
gene_biotype: protein_coding
description:
  Riboflavin transporter FmnP; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family.


ensembl_gene_id: SAMN02745784_02345
symbol: SHE95611.1
gene_biotype: protein_coding
description:
  Predicted polyphosphate-or ATP-dependent NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: SAMN02745784_02348
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: SAMN02745784_02349
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: SAMN02745784_02350
symbol: hpf
gene_biotype: protein_coding
description:
  Putative sigma-54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: SAMN02745784_02365
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: SAMN02745784_02370
symbol: SHE96618.1
gene_biotype: protein_coding
description:
  RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN02745784_02371
symbol: SHE96635.1
gene_biotype: protein_coding
description:
  Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN02745784_02381
symbol: SHE96845.1
gene_biotype: protein_coding
description:
  MutS domain V; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity. Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: SAMN02745784_02403
symbol: SHE97333.1
gene_biotype: protein_coding
description:
  Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN02745784_02418
symbol: ileS
gene_biotype: protein_coding
description:
  Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.


ensembl_gene_id: SAMN02745784_02433
symbol: SHE98463.1
gene_biotype: protein_coding
description:
  Adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.


ensembl_gene_id: SAMN02745784_02439
symbol: cobB
gene_biotype: protein_coding
description:
  NAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.


ensembl_gene_id: SAMN02745784_02448
symbol: hisC-2
gene_biotype: protein_coding
description:
  Histidinol phosphate aminotransferase apoenzyme; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: SAMN02745784_02454
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA/Sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: SAMN02745784_02458
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: SAMN02745784_02459
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: SAMN02745784_02461
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]


ensembl_gene_id: SAMN02745784_02463
symbol: gltX
gene_biotype: protein_coding
description:
  Nondiscriminating glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: SAMN02745784_02465
symbol: mrnC
gene_biotype: protein_coding
description:
  Ribonuclease-3 family protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.


ensembl_gene_id: SAMN02745784_02466
symbol: thyX
gene_biotype: protein_coding
description:
  Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: SAMN02745784_02467
symbol: SHE99251.1
gene_biotype: protein_coding
description:
  23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN02745784_02471
symbol: tuf
gene_biotype: protein_coding
description:
  Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: SAMN02745784_02475
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN02745784_02481
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: SAMN02745784_02488
symbol: SHF00218.1
gene_biotype: protein_coding
description:
  Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: SAMN02745784_02490
symbol: SHF00267.1
gene_biotype: protein_coding
description:
  c-di-AMP phosphodiesterase, consists of a GGDEF-like and DHH domains; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.


ensembl_gene_id: SAMN02745784_02493
symbol: rpsR
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: SAMN02745784_02501
symbol: pstB-2
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein, PhoT family (TC 3.A.1.7.1); Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: SAMN02745784_02511
symbol: citD
gene_biotype: protein_coding
description:
  Citrate lyase subunit gamma (acyl carrier protein); Covalent carrier of the coenzyme of citrate lyase.


ensembl_gene_id: SAMN02745784_02512
symbol: SHF00734.1
gene_biotype: protein_coding
description:
  [citrate (pro-3S)-lyase] ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.


ensembl_gene_id: SAMN02745784_02540
symbol: rpsJ
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: SAMN02745784_02541
symbol: rplC
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: SAMN02745784_02543
symbol: rplW
gene_biotype: protein_coding
description:
  LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: SAMN02745784_02544
symbol: rplB
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: SAMN02745784_02545
symbol: rpsS
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: SAMN02745784_02546
symbol: rplV
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: SAMN02745784_02547
symbol: rpsC
gene_biotype: protein_coding
description:
  SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: SAMN02745784_02548
symbol: rplP
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: SAMN02745784_02550
symbol: rpsQ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: SAMN02745784_02551
symbol: rplN
gene_biotype: protein_coding
description:
  LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: SAMN02745784_02552
symbol: rplX
gene_biotype: protein_coding
description:
  LSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: SAMN02745784_02553
symbol: rplE
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: SAMN02745784_02554
symbol: rpsZ
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: SAMN02745784_02555
symbol: rpsH
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: SAMN02745784_02556
symbol: rplF
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: SAMN02745784_02557
symbol: rplR
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: SAMN02745784_02558
symbol: rpsE
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: SAMN02745784_02560
symbol: rplO
gene_biotype: protein_coding
description:
  LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: SAMN02745784_02561
symbol: secY
gene_biotype: protein_coding
description:
  Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: SAMN02745784_02562
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: SAMN02745784_02564
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: SAMN02745784_02565
symbol: rpsM
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: SAMN02745784_02566
symbol: rpsK
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: SAMN02745784_02568
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN02745784_02570
symbol: ecfA
gene_biotype: protein_coding
description:
  Energy-coupling factor transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: SAMN02745784_02572
symbol: ecfT
gene_biotype: protein_coding
description:
  Energy-coupling factor transport system permease protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: SAMN02745784_02574
symbol: rplM
gene_biotype: protein_coding
description:
  LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: SAMN02745784_02578
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: SAMN02745784_02579
symbol: gcvPA
gene_biotype: protein_coding
description:
  Glycine dehydrogenase (decarboxylating) alpha subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: SAMN02745784_02580
symbol: gcvPB
gene_biotype: protein_coding
description:
  Glycine dehydrogenase (decarboxylating) beta subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily.


ensembl_gene_id: SAMN02745784_02587
symbol: SHF03121.1
gene_biotype: protein_coding
description:
  Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: SAMN02745784_02658
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: SAMN02745784_02659
symbol: bioD
gene_biotype: protein_coding
description:
  Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: SAMN02745784_02660
symbol: bioA
gene_biotype: protein_coding
description:
  Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.


ensembl_gene_id: SAMN02745784_02716
symbol: SHF07357.1
gene_biotype: protein_coding
description:
  DNA (cytosine-5)-methyltransferase 1; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.


ensembl_gene_id: SAMN02745784_02767
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: SAMN02745784_02769
symbol: SHF09223.1
gene_biotype: protein_coding
description:
  Superoxide dismutase, Cu-Zn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.


ensembl_gene_id: SAMN02745784_02797
symbol: SHF09708.1
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: SAMN02745784_02801
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: SAMN02745784_02802
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: SAMN02745784_02812
symbol: SHF09942.1
gene_biotype: protein_coding
description:
  Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SAMN02745784_02825
symbol: surE
gene_biotype: protein_coding
description:
  5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: SAMN02745784_02853
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: SAMN02745784_02854
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: SAMN02745784_02855
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase trmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: SAMN02745784_02858
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: SAMN02745784_02860
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: SAMN02745784_02861
symbol: SHF11416.1
gene_biotype: protein_coding
description:
  DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]


ensembl_gene_id: SAMN02745784_02863
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: SAMN02745784_02865
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN02745784_02866
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN02745784_02880
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: SAMN02745784_02884
symbol: sucC
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: SAMN02745784_02885
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: SAMN02745784_02888
symbol: infC
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 3 (bIF-3); IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: SAMN02745784_02890
symbol: rplT
gene_biotype: protein_coding
description:
  LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: SAMN02745784_02893
symbol: SHF12538.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN02745784_02894
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: SAMN02745784_02895
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: SAMN02745784_02896
symbol: SHF12602.1
gene_biotype: protein_coding
description:
  Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: SAMN02745784_02898
symbol: mutS2
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: SAMN02745784_02968
symbol: recU
gene_biotype: protein_coding
description:
  Recombination protein U; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family.


ensembl_gene_id: SAMN02745784_03013
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: SAMN02745784_03018
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: SAMN02745784_03019
symbol: SHF16370.1
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: SAMN02745784_03021
symbol: secF
gene_biotype: protein_coding
description:
  Protein translocase subunit secF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: SAMN02745784_03022
symbol: secD
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: SAMN02745784_03027
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: SAMN02745784_03028
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine--tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: SAMN02745784_03030
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: SAMN02745784_03031
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: SAMN02745784_03032
symbol: ruvC
gene_biotype: protein_coding
description:
  Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: SAMN02745784_03039
symbol: SHF17128.1
gene_biotype: protein_coding
description:
  NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: SAMN02745784_03049
symbol: SHF17331.1
gene_biotype: protein_coding
description:
  Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: SAMN02745784_03051
symbol: ribBA
gene_biotype: protein_coding
description:
  3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: SAMN02745784_03052
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: SAMN02745784_03058
symbol: speD
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 2 subfamily.


ensembl_gene_id: SAMN02745784_03059
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: SAMN02745784_03090
symbol: thiI
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.


ensembl_gene_id: SAMN02745784_03092
symbol: potA
gene_biotype: protein_coding
description:
  Spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.


ensembl_gene_id: SAMN02745784_03137
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: SAMN02745784_03151
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: SAMN02745784_03152
symbol: plsY
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate acyltransferase PlsY; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: SAMN02745784_03153
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol 3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN02745784_03163
symbol: folD
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: SAMN02745784_03165
symbol: fusA
gene_biotype: protein_coding
description:
  Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: SAMN02745784_03166
symbol: rpsG
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: SAMN02745784_03167
symbol: rpsL
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: SAMN02745784_03169
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN02745784_03171
symbol: rplL
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: SAMN02745784_03172
symbol: rplJ
gene_biotype: protein_coding
description:
  LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: SAMN02745784_03174
symbol: rplA
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: SAMN02745784_03175
symbol: rplK
gene_biotype: protein_coding
description:
  LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: SAMN02745784_03176
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: SAMN02745784_03177
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: SAMN02745784_03190
symbol: rlmH
gene_biotype: protein_coding
description:
  23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: SAMN02745784_03211
symbol: SHF21882.1
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: SAMN02745784_03212
symbol: SHF21904.1
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: SAMN02745784_03222
symbol: SHF22425.1
gene_biotype: protein_coding
description:
  Putative ABC transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


# pathwayInfo

id: CL:1012
description: Sulfate assimilation, and Sulfur relay system
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1012_Sulfate_assimilation,_and_Sulfur_relay_system


id: CL:1016
description: DsrEFH-like, and Rhodanese Homology Domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1016_DsrEFH-like,_and_Rhodanese_Homology_Domain


id: CL:1037
description: Mixed, incl. Fatty acid metabolism, and Butanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1037_Mixed,_incl._Fatty_acid_metabolism,_and_Butanoate_metabolism


id: CL:1038
description: Mixed, incl. Fatty acid metabolic process, and Short-chain dehydrogenase/reductase SDR
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1038_Mixed,_incl._Fatty_acid_metabolic_process,_and_Short-chain_dehydrogenase/reductase_SDR


id: CL:1039
description: Fatty acid metabolism, and Fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1039_Fatty_acid_metabolism,_and_Fatty_acid_metabolic_process


id: CL:104
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:104_Structural_constituent_of_ribosome


id: CL:1041
description: Fatty acid metabolism, and Phosphopantetheine
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1041_Fatty_acid_metabolism,_and_Phosphopantetheine


id: CL:106
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:106_Structural_constituent_of_ribosome


id: CL:1069
description: Mixed, incl. Electron transfer flavoprotein domain, and Acyl-CoA dehydrogenase, middle domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1069_Mixed,_incl._Electron_transfer_flavoprotein_domain,_and_Acyl-CoA_dehydrogenase,_middle_domain


id: CL:1086
description: Mixed, incl. Benzoate degradation, and Biotin
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1086_Mixed,_incl._Benzoate_degradation,_and_Biotin


id: CL:1088
description: Benzoate degradation, and Biotin
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1088_Benzoate_degradation,_and_Biotin


id: CL:110
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:110_Structural_constituent_of_ribosome


id: CL:1113
description: Mixed, incl. Amino acid salvage, and ANL, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1113_Mixed,_incl._Amino_acid_salvage,_and_ANL,_N-terminal_domain


id: CL:1128
description: Mixed, incl. Taurine and hypotaurine metabolism, and Butanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1128_Mixed,_incl._Taurine_and_hypotaurine_metabolism,_and_Butanoate_metabolism


id: CL:1130
description: Mixed, incl. Butyrate kinase, and Phosphate acetyl/butyryltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1130_Mixed,_incl._Butyrate_kinase,_and_Phosphate_acetyl/butyryltransferase


id: CL:1158
description: Pyruvate formate lyase-like, and Taurine and hypotaurine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1158_Pyruvate_formate_lyase-like,_and_Taurine_and_hypotaurine_metabolism


id: CL:1167
description: Mixed, incl. Glycine, serine and threonine metabolism, and Purine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1167_Mixed,_incl._Glycine,_serine_and_threonine_metabolism,_and_Purine_biosynthesis


id: CL:1168
description: Mixed, incl. Glycine, serine and threonine metabolism, and Purine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1168_Mixed,_incl._Glycine,_serine_and_threonine_metabolism,_and_Purine_biosynthesis


id: CL:1169
description: Cysteine and methionine metabolism, and Lysine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1169_Cysteine_and_methionine_metabolism,_and_Lysine_biosynthesis


id: CL:1170
description: Aspartate family amino acid biosynthetic process, and Cysteine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1170_Aspartate_family_amino_acid_biosynthetic_process,_and_Cysteine_metabolic_process


id: CL:1172
description: Mixed, incl. Threonine biosynthetic process, and Homoserine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1172_Mixed,_incl._Threonine_biosynthetic_process,_and_Homoserine_metabolic_process


id: CL:1174
description: Cysteine biosynthetic process, and Transsulfuration
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1174_Cysteine_biosynthetic_process,_and_Transsulfuration


id: CL:1190
description: Threonine biosynthesis, and L-serine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1190_Threonine_biosynthesis,_and_L-serine_biosynthetic_process


id: CL:1221
description: Mixed, incl. D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain, and Microbody
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1221_Mixed,_incl._D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD-binding_domain,_and_Microbody


id: CL:1222
description: Microbody, and L-serine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1222_Microbody,_and_L-serine_biosynthetic_process


id: CL:1231
description: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain, and CTP salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1231_D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD-binding_domain,_and_CTP_salvage


id: CL:1240
description: One carbon pool by folate, and De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1240_One_carbon_pool_by_folate,_and_De_novo_IMP_biosynthetic_process


id: CL:1241
description: Glycine metabolic process, and De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1241_Glycine_metabolic_process,_and_De_novo_IMP_biosynthetic_process


id: CL:1268
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1268_De_novo_IMP_biosynthetic_process


id: CL:1283
description: Tetrahydrofolate interconversion
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1283_Tetrahydrofolate_interconversion


id: CL:1295
description: Mixed, incl. Biotin biosynthesis, and S-adenosylmethionine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1295_Mixed,_incl._Biotin_biosynthesis,_and_S-adenosylmethionine_metabolic_process


id: CL:1297
description: S-adenosylmethionine metabolic process, and Ubiquinone
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1297_S-adenosylmethionine_metabolic_process,_and_Ubiquinone


id: CL:1313
description: Mixed, incl. Peptidase U32, and Methyltransferase domain 25
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1313_Mixed,_incl._Peptidase_U32,_and_Methyltransferase_domain_25


id: CL:1325
description: Mixed, incl. Detoxification, and Oxidoreductase activity, acting on a sulfur group of donors
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1325_Mixed,_incl._Detoxification,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: CL:1326
description: Mixed, incl. Thioredoxin-like superfamily, and Lipoic acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1326_Mixed,_incl._Thioredoxin-like_superfamily,_and_Lipoic_acid_metabolism


id: CL:1328
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1328_Mixed,_incl._Thioredoxin_domain,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor

description:
  Mixed, incl. Thioredoxin domain, and Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor


id: CL:1330
description: Peroxiredoxin activity, and Redox-active center
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1330_Peroxiredoxin_activity,_and_Redox-active_center


id: CL:1365
description: Mixed, incl. Ferritin-like diiron domain, and Rubredoxin-oxygen oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1365_Mixed,_incl._Ferritin-like_diiron_domain,_and_Rubredoxin-oxygen_oxidoreductase


id: CL:1368
description: Rubredoxin-oxygen oxidoreductase, and Rubredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1368_Rubredoxin-oxygen_oxidoreductase,_and_Rubredoxin


id: CL:1387
description: Mixed, incl. Pentose phosphate pathway, and Carbohydrate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1387_Mixed,_incl._Pentose_phosphate_pathway,_and_Carbohydrate_transport


id: CL:1388
description: Mixed, incl. Pentose phosphate pathway, and Carbohydrate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1388_Mixed,_incl._Pentose_phosphate_pathway,_and_Carbohydrate_transport


id: CL:1390
description: Carbohydrate transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1390_Carbohydrate_transport,_and_ABC_transporter,_permease


id: CL:1391
description: Mixed, incl. Carbohydrate transport, and LacI-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1391_Mixed,_incl._Carbohydrate_transport,_and_LacI-type_HTH_domain


id: CL:1394
description: Sugar transport, and LacI-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1394_Sugar_transport,_and_LacI-type_HTH_domain


id: CL:1414
description: Mixed, incl. Protein of unknown function DUF3798, and Pentose transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1414_Mixed,_incl._Protein_of_unknown_function_DUF3798,_and_Pentose_transmembrane_transport


id: CL:1437
description: Pentose phosphate pathway, and Oligosaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1437_Pentose_phosphate_pathway,_and_Oligosaccharide_metabolic_process


id: CL:1440
description: Glycolytic process, and NADPH regeneration
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1440_Glycolytic_process,_and_NADPH_regeneration


id: CL:1457
description: Mixed, incl. Alpha-D-phosphohexomutase superfamily, and Glutamine amidotransferase type 2 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1457_Mixed,_incl._Alpha-D-phosphohexomutase_superfamily,_and_Glutamine_amidotransferase_type_2_domain


id: CL:1478
description: Mixed, incl. Citrate transporter, and RpiR-like, SIS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1478_Mixed,_incl._Citrate_transporter,_and_RpiR-like,_SIS_domain


id: CL:1494
description: Mixed, incl. Histidine biosynthetic process, and Aromatic amino acid family biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1494_Mixed,_incl._Histidine_biosynthetic_process,_and_Aromatic_amino_acid_family_biosynthetic_process


id: CL:1495
description: Histidine biosynthetic process, and HAD superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1495_Histidine_biosynthetic_process,_and_HAD_superfamily


id: CL:1502
description: Histidine biosynthesis protein, and histidine-tRNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1502_Histidine_biosynthesis_protein,_and_histidine-tRNA_ligase_activity


id: CL:1527
description: Thioesterase domain, and ABC transporter transmembrane region
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1527_Thioesterase_domain,_and_ABC_transporter_transmembrane_region


id: CL:1536
description: Mixed, incl. Aromatic amino acid family biosynthetic process, and Peptidase M16, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1536_Mixed,_incl._Aromatic_amino_acid_family_biosynthetic_process,_and_Peptidase_M16,_C-terminal


id: CL:1537
description: Aromatic amino acid family biosynthetic process, and Phosphoglycerate mutase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1537_Aromatic_amino_acid_family_biosynthetic_process,_and_Phosphoglycerate_mutase_family


id: CL:1541
description: Chorismate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1541_Chorismate_biosynthetic_process


id: CL:1560
description: Mixed, incl. Peptidase M16, C-terminal, and Sporulation lipoprotein YhcN/YlaJ-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1560_Mixed,_incl._Peptidase_M16,_C-terminal,_and_Sporulation_lipoprotein_YhcN/YlaJ-like


id: CL:1575
description: Mixed, incl. CDP-alcohol phosphatidyltransferase, and Lipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1575_Mixed,_incl._CDP-alcohol_phosphatidyltransferase,_and_Lipid_metabolism


id: CL:1576
description: Mixed, incl. CDP-alcohol phosphatidyltransferase, and Lysyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1576_Mixed,_incl._CDP-alcohol_phosphatidyltransferase,_and_Lysyltransferase_activity


id: CL:1579
description: CDP-alcohol phosphatidyltransferase, and MoaB/Mog domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1579_CDP-alcohol_phosphatidyltransferase,_and_MoaB/Mog_domain


id: CL:1594
description: Mixed, incl. Phosphonate and phosphinate metabolism, and Peptidase M16, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1594_Mixed,_incl._Phosphonate_and_phosphinate_metabolism,_and_Peptidase_M16,_N-terminal


id: CL:1606
description: Mixed, incl. Acyl carrier protein (ACP), and RNA polymerase sigma-70 like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1606_Mixed,_incl._Acyl_carrier_protein_(ACP),_and_RNA_polymerase_sigma-70_like


id: CL:161
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:161_Structural_constituent_of_ribosome


id: CL:1618
description: Mixed, incl. ATPase-coupled ion transmembrane transporter activity, and Acid phosphatase homologues
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1618_Mixed,_incl._ATPase-coupled_ion_transmembrane_transporter_activity,_and_Acid_phosphatase_homologues


id: CL:1621
description: ATPase-coupled ion transmembrane transporter activity, and ATP synthase subunit C
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1621_ATPase-coupled_ion_transmembrane_transporter_activity,_and_ATP_synthase_subunit_C


id: CL:163
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:163_Structural_constituent_of_ribosome


id: CL:164
description: Mixed, incl. Ribosomal subunit, and Ribosomal protein L2, domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:164_Mixed,_incl._Ribosomal_subunit,_and_Ribosomal_protein_L2,_domain_2


id: CL:1645
description: Mostly uncharacterized, incl. Nitroreductase, and Peptidase S58, DmpA
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1645_Mostly_uncharacterized,_incl._Nitroreductase,_and_Peptidase_S58,_DmpA


id: CL:1646
description: Mostly uncharacterized, incl. FMN-binding split barrel, and tRNA pseudouridine synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1646_Mostly_uncharacterized,_incl._FMN-binding_split_barrel,_and_tRNA_pseudouridine_synthase


id: CL:1648
description: Mixed, incl. Alpha/beta hydrolase fold-1, and Acetyltransferase (GNAT) family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1648_Mixed,_incl._Alpha/beta_hydrolase_fold-1,_and_Acetyltransferase_(GNAT)_family


id: CL:165
description: Ribosomal subunit, and Peptide binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:165_Ribosomal_subunit,_and_Peptide_binding


id: CL:166
description: Large ribosomal subunit, and Small ribosomal subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:166_Large_ribosomal_subunit,_and_Small_ribosomal_subunit


id: CL:1669
description: Mixed, incl. Peptidase S58, DmpA, and Peptidase M16, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1669_Mixed,_incl._Peptidase_S58,_DmpA,_and_Peptidase_M16,_N-terminal


id: CL:1678
description: Mixed, incl. Translocase, and Regulation of cellular component biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1678_Mixed,_incl._Translocase,_and_Regulation_of_cellular_component_biogenesis


id: CL:1679
description: Mixed, incl. Translocase, and Regulation of cellular component biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1679_Mixed,_incl._Translocase,_and_Regulation_of_cellular_component_biogenesis


id: CL:1680
description: Mixed, incl. Translocase, and ApbE family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1680_Mixed,_incl._Translocase,_and_ApbE_family


id: CL:1681
description: Mixed, incl. Regulation of cell cycle, and Terpenoid backbone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1681_Mixed,_incl._Regulation_of_cell_cycle,_and_Terpenoid_backbone_biosynthesis


id: CL:1683
description: Mixed, incl. Regulation of cell cycle, and Actin
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1683_Mixed,_incl._Regulation_of_cell_cycle,_and_Actin


id: CL:1729
description: Mixed, incl. Ribosome assembly, and NAD biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1729_Mixed,_incl._Ribosome_assembly,_and_NAD_biosynthetic_process


id: CL:1732
description: Ribosome assembly, and NAD biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1732_Ribosome_assembly,_and_NAD_biosynthetic_process


id: CL:1748
description: Mostly uncharacterized, incl. RelA/SpoT, and Cof family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1748_Mostly_uncharacterized,_incl._RelA/SpoT,_and_Cof_family


id: CL:1750
description: Mixed, incl. RelA/SpoT, and Ribonucleoside-triphosphate reductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1750_Mixed,_incl._RelA/SpoT,_and_Ribonucleoside-triphosphate_reductase_activity


id: CL:177
description: Peptide binding, and Ribosomal subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:177_Peptide_binding,_and_Ribosomal_subunit


id: CL:1773
description: Mixed, incl. Cell division, and Hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1773_Mixed,_incl._Cell_division,_and_Hydrolase_activity


id: CL:1774
description: Mixed, incl. Cell division, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1774_Mixed,_incl._Cell_division,_and_Signal


id: CL:1775
description: Mixed, incl. Cell division, and Cell wall organization or biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1775_Mixed,_incl._Cell_division,_and_Cell_wall_organization_or_biogenesis


id: CL:1776
description: Mixed, incl. Cell division, and Peptidoglycan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1776_Mixed,_incl._Cell_division,_and_Peptidoglycan_biosynthesis


id: CL:1778
description: Mixed, incl. Cell division, and Beta-lactamase/transpeptidase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1778_Mixed,_incl._Cell_division,_and_Beta-lactamase/transpeptidase-like


id: CL:1779
description: Peptidoglycan biosynthesis, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1779_Peptidoglycan_biosynthesis,_and_Cell_division


id: CL:1781
description: Peptidoglycan biosynthesis, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1781_Peptidoglycan_biosynthesis,_and_Cell_division_site


id: CL:1783
description: Cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1783_Cell_shape,_and_Cell_division_site


id: CL:1821
description: Penicillin-binding protein, transpeptidase, and Actin
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1821_Penicillin-binding_protein,_transpeptidase,_and_Actin


id: CL:1836
description: Mixed, incl. Carboxypeptidase activity, and G5 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1836_Mixed,_incl._Carboxypeptidase_activity,_and_G5_domain


id: CL:1838
description: Carboxypeptidase activity, and Ami_3
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1838_Carboxypeptidase_activity,_and_Ami_3


id: CL:1852
description: Mixed, incl. Outer membrane, and Cell aggregation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1852_Mixed,_incl._Outer_membrane,_and_Cell_aggregation


id: CL:186
description: Ribosomal protein L2, domain 2, and Large ribosomal subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:186_Ribosomal_protein_L2,_domain_2,_and_Large_ribosomal_subunit


id: CL:1870
description: DbpA RNA binding domain , and Identical protein binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1870_DbpA_RNA_binding_domain___,_and_Identical_protein_binding


id: CL:1890
description: Mixed, incl. Racemase and epimerase activity, and Copper amine oxidase N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1890_Mixed,_incl._Racemase_and_epimerase_activity,_and_Copper_amine_oxidase_N-terminal_domain


id: CL:1891
description: Mixed, incl. Racemase and epimerase activity, and Protein of unknown function DUF4330
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1891_Mixed,_incl._Racemase_and_epimerase_activity,_and_Protein_of_unknown_function_DUF4330


id: CL:1892
description: Mixed, incl. Protein of unknown function DUF4330, and Glycosyl transferase, family 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1892_Mixed,_incl._Protein_of_unknown_function_DUF4330,_and_Glycosyl_transferase,_family_1


id: CL:1896
description: Mixed, incl. Glycosyl transferases group 1, and Protein of unknown function DUF4330
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1896_Mixed,_incl._Glycosyl_transferases_group_1,_and_Protein_of_unknown_function_DUF4330


id: CL:1917
description: NADHX epimerase activity, and Alanine racemase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1917_NADHX_epimerase_activity,_and_Alanine_racemase


id: CL:1933
description: Copper amine oxidase N-terminal domain, and Lytic endotransglycosylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1933_Copper_amine_oxidase_N-terminal_domain,_and_Lytic_endotransglycosylase_activity


id: CL:1947
description: Mostly uncharacterized, incl. Endopeptidase activity, and PspC domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1947_Mostly_uncharacterized,_incl._Endopeptidase_activity,_and_PspC_domain


id: CL:1949
description: Mostly uncharacterized, incl. Protein maturation, and PspC domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1949_Mostly_uncharacterized,_incl._Protein_maturation,_and_PspC_domain


id: CL:1950
description: Mostly uncharacterized, incl. Protein maturation, and PspC domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1950_Mostly_uncharacterized,_incl._Protein_maturation,_and_PspC_domain


id: CL:1952
description: Mostly uncharacterized, incl. Primosome complex, and Nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1952_Mostly_uncharacterized,_incl._Primosome_complex,_and_Nucleoid


id: CL:1955
description: Mostly uncharacterized, incl. Nucleoid, and FlgN protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1955_Mostly_uncharacterized,_incl._Nucleoid,_and_FlgN_protein


id: CL:1956
description: Mixed, incl. Nucleoid, and FlgN protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1956_Mixed,_incl._Nucleoid,_and_FlgN_protein


id: CL:1958
description: Mixed, incl. Lysin motif, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1958_Mixed,_incl._Lysin_motif,_and_Signal


id: CL:1975
description: Mixed, incl. FlgN protein, and Toxin activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1975_Mixed,_incl._FlgN_protein,_and_Toxin_activity


id: CL:1986
description: Mixed, incl. MFS transporter superfamily, and CAAX-box protein maturation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:1986_Mixed,_incl._MFS_transporter_superfamily,_and_CAAX-box_protein_maturation


id: CL:2012
description: Mixed, incl. DnaD-like domain superfamily, and Chromosomal replication initiator protein DnaA
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2012_Mixed,_incl._DnaD-like_domain_superfamily,_and_Chromosomal_replication_initiator_protein_DnaA


id: CL:2034
description: Mixed, incl. PspC domain, and Phenazine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2034_Mixed,_incl._PspC_domain,_and_Phenazine_biosynthesis


id: CL:2048
description: Mixed, incl. Phospholipase D-like domain, and Elongation Factor G, domain II
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2048_Mixed,_incl._Phospholipase_D-like_domain,_and_Elongation_Factor_G,_domain_II


id: CL:2072
description: Mixed, incl. GerMN domain, and Domain of unknown function DUF5698
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2072_Mixed,_incl._GerMN_domain,_and_Domain_of_unknown_function_DUF5698


id: CL:2085
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2085_Mostly_uncharacterized,_incl._Cyclic-di-AMP_receptor,_and_RNA_phosphodiester_bond_hydrolysis,_endonucleolytic

description:
  Mostly uncharacterized, incl. Cyclic-di-AMP receptor, and RNA phosphodiester bond hydrolysis, endonucleolytic


id: CL:2086
description: Mostly uncharacterized, incl. FtsK domain, and Peptidase S1C
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2086_Mostly_uncharacterized,_incl._FtsK_domain,_and_Peptidase_S1C


id: CL:2087
description: Mostly uncharacterized, incl. FtsK domain, and Phospholipase C/D
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2087_Mostly_uncharacterized,_incl._FtsK_domain,_and_Phospholipase_C/D


id: CL:2089
description: Mixed, incl. FtsK domain, and Rad50/SbcC-type AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2089_Mixed,_incl._FtsK_domain,_and_Rad50/SbcC-type_AAA_domain


id: CL:2103
description: Mixed, incl. Late competence development protein ComFB
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2103_Mixed,_incl._Late_competence_development_protein_ComFB


id: CL:2113
description: Mixed, incl. Peptidase S1C, and tRNA 3-trailer cleavage
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2113_Mixed,_incl._Peptidase_S1C,_and_tRNA_3-trailer_cleavage


id: CL:2123
description: Mixed, incl. Cyclic-di-AMP receptor, and 7Fe ferredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2123_Mixed,_incl._Cyclic-di-AMP_receptor,_and_7Fe_ferredoxin


id: CL:2126
description: Cyclic-di-AMP receptor, and 7Fe ferredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2126_Cyclic-di-AMP_receptor,_and_7Fe_ferredoxin


id: CL:2144
description: Mixed, incl. Pilus organization, and Establishment of competence for transformation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2144_Mixed,_incl._Pilus_organization,_and_Establishment_of_competence_for_transformation


id: CL:2145
description: Mixed, incl. Pilus organization, and Establishment of competence for transformation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2145_Mixed,_incl._Pilus_organization,_and_Establishment_of_competence_for_transformation


id: CL:2146
description: Pilus assembly, and Prokaryotic N-terminal methylation site
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2146_Pilus_assembly,_and_Prokaryotic_N-terminal_methylation_site


id: CL:2171
description: Establishment of competence for transformation, and Type IV leader peptidase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2171_Establishment_of_competence_for_transformation,_and_Type_IV_leader_peptidase_family


id: CL:2187
description: DNA catabolic process, and Alkaline shock protein Asp23
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2187_DNA_catabolic_process,_and_Alkaline_shock_protein_Asp23


id: CL:2203
description: Mixed, incl. Cell differentiation, and Starch and sucrose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2203_Mixed,_incl._Cell_differentiation,_and_Starch_and_sucrose_metabolism


id: CL:2204
description: Cell differentiation, and Virion
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2204_Cell_differentiation,_and_Virion


id: CL:2205
description: Cell differentiation, and Virion
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2205_Cell_differentiation,_and_Virion


id: CL:2206
description: Cell differentiation, and Virion
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2206_Cell_differentiation,_and_Virion


id: CL:2207
description: Cell differentiation, and Virion
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2207_Cell_differentiation,_and_Virion


id: CL:2209
description: Cell differentiation, and Virion
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2209_Cell_differentiation,_and_Virion


id: CL:2213
description: Sporulation, and RNA polymerase sigma-B/F/G type
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2213_Sporulation,_and_RNA_polymerase_sigma-B/F/G_type


id: CL:2220
description: Mixed, incl. Endospore-forming forespore, and RNA polymerase sigma-70
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2220_Mixed,_incl._Endospore-forming_forespore,_and_RNA_polymerase_sigma-70


id: CL:2222
description: Mixed, incl. Aspartyl protease, and Sporulation protein YlmC/YmxH
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2222_Mixed,_incl._Aspartyl_protease,_and_Sporulation_protein_YlmC/YmxH


id: CL:2232
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2232_Mixed,_incl._Peptidase_HybD-like_domain_superfamily,_and_Transcription_regulator,_HTH_DeoR-type,_conserved_site

description:
  Mixed, incl. Peptidase HybD-like domain superfamily, and Transcription regulator, HTH DeoR-type, conserved site


id: CL:2244
description: Mixed, incl. YabP family, and Clp protease
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2244_Mixed,_incl._YabP_family,_and_Clp_protease


id: CL:2254
description: Stage III sporulation protein AC/AD family, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2254_Stage_III_sporulation_protein_AC/AD_family,_and_Sporulation


id: CL:2273
description: Mixed, incl. SpoVA, and STAS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2273_Mixed,_incl._SpoVA,_and_STAS_domain


id: CL:2288
description: Spore germination, and Peptidase HybD-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2288_Spore_germination,_and_Peptidase_HybD-like_domain_superfamily


id: CL:2289
description: Spore germination, and Peptidase HybD-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2289_Spore_germination,_and_Peptidase_HybD-like_domain_superfamily


id: CL:2338
description: Mixed, incl. Endospore-forming forespore, and UTP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2338_Mixed,_incl._Endospore-forming_forespore,_and_UTP_metabolic_process


id: CL:2341
description: Endospore-forming forespore, and UTP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2341_Endospore-forming_forespore,_and_UTP_metabolic_process


id: CL:2354
description: Mixed, incl. Cellular response to heat, and Methyltransferase domain 25
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2354_Mixed,_incl._Cellular_response_to_heat,_and_Methyltransferase_domain_25


id: CL:2363
description: Mixed, incl. Helix-turn-helix domain, group 17, and SpoVT / AbrB like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2363_Mixed,_incl._Helix-turn-helix_domain,_group_17,_and_SpoVT_/_AbrB_like_domain


id: CL:2374
description: Mostly uncharacterized, incl. SpoVT / AbrB like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2374_Mostly_uncharacterized,_incl._SpoVT_/_AbrB_like_domain


id: CL:2385
description: Mixed, incl. Starch and sucrose metabolism, and Chromosome partition
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2385_Mixed,_incl._Starch_and_sucrose_metabolism,_and_Chromosome_partition


id: CL:2386
description: Mixed, incl. Starch and sucrose metabolism, and Citrate cycle (TCA cycle)
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2386_Mixed,_incl._Starch_and_sucrose_metabolism,_and_Citrate_cycle_(TCA_cycle)


id: CL:2387
description: Mixed, incl. Starch and sucrose metabolism, and Citrate cycle (TCA cycle)
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2387_Mixed,_incl._Starch_and_sucrose_metabolism,_and_Citrate_cycle_(TCA_cycle)


id: CL:2406
description: Peptidase M42, domain 2, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2406_Peptidase_M42,_domain_2,_and_AAA_domain


id: CL:2419
description: Penicillin-binding protein 5, C-terminal domain, and Peptidase M50
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2419_Penicillin-binding_protein_5,_C-terminal_domain,_and_Peptidase_M50


id: CL:2433
description: Mixed, incl. Sulfuric ester hydrolase activity, and Outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2433_Mixed,_incl._Sulfuric_ester_hydrolase_activity,_and_Outer_membrane


id: CL:2436
description: Mixed, incl. Outer membrane, and Glutathione metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2436_Mixed,_incl._Outer_membrane,_and_Glutathione_metabolic_process


id: CL:2452
description: Mixed, incl. Peptidase M20, and De novo UMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2452_Mixed,_incl._Peptidase_M20,_and_De_novo_UMP_biosynthetic_process


id: CL:2453
description: Mixed, incl. Peptidase M20, and De novo UMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2453_Mixed,_incl._Peptidase_M20,_and_De_novo_UMP_biosynthetic_process


id: CL:2454
description: Mixed, incl. De novo UMP biosynthetic process, and Allantoin catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2454_Mixed,_incl._De_novo_UMP_biosynthetic_process,_and_Allantoin_catabolic_process


id: CL:2455
description: Mixed, incl. De novo UMP biosynthetic process, and Allantoin catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2455_Mixed,_incl._De_novo_UMP_biosynthetic_process,_and_Allantoin_catabolic_process


id: CL:2456
description: Mixed, incl. De novo UMP biosynthetic process, and Allantoin catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2456_Mixed,_incl._De_novo_UMP_biosynthetic_process,_and_Allantoin_catabolic_process


id: CL:2457
description: Mixed, incl. De novo UMP biosynthetic process, and Coat F domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2457_Mixed,_incl._De_novo_UMP_biosynthetic_process,_and_Coat_F_domain


id: CL:2459
description: De novo UMP biosynthetic process, and Permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2459_De_novo_UMP_biosynthetic_process,_and_Permease_family


id: CL:2479
description: Mixed, incl. Coat F domain, and ABC-type amino acid transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2479_Mixed,_incl._Coat_F_domain,_and_ABC-type_amino_acid_transporter_activity


id: CL:2490
description: Mixed, incl. Allantoin catabolic process, and Uracil/uridine/allantoin permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2490_Mixed,_incl._Allantoin_catabolic_process,_and_Uracil/uridine/allantoin_permease


id: CL:2492
description: Mixed, incl. Allantoin catabolic process, and Uracil/uridine/allantoin permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2492_Mixed,_incl._Allantoin_catabolic_process,_and_Uracil/uridine/allantoin_permease


id: CL:2494
description: Allantoin catabolic process, and Uracil/uridine/allantoin permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2494_Allantoin_catabolic_process,_and_Uracil/uridine/allantoin_permease


id: CL:2523
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2523_Mixed,_incl._YsiA-like_protein,_C-terminal_region,_and_Succinyl-diaminopimelate_desuccinylase_activity

description:
  Mixed, incl. YsiA-like protein, C-terminal region, and Succinyl-diaminopimelate desuccinylase activity


id: CL:2532
description: Mixed, incl. Na+/H+ antiporter NhaC, and Glycoside hydrolase/deacetylase, beta/alpha-barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2532_Mixed,_incl._Na+/H+_antiporter_NhaC,_and_Glycoside_hydrolase/deacetylase,_beta/alpha-barrel


id: CL:2541
description: Mixed, incl. Peptidase M20, and Serpin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2541_Mixed,_incl._Peptidase_M20,_and_Serpin_domain


id: CL:2543
description: Mixed, incl. Peptidase M20, and Peptidase family M1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2543_Mixed,_incl._Peptidase_M20,_and_Peptidase_family_M1_domain


id: CL:2545
description: Glutathione metabolism, and Creatinase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2545_Glutathione_metabolism,_and_Creatinase,_N-terminal


id: CL:2548
description: Peptidase family M1 domain, and Macro domain-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2548_Peptidase_family_M1_domain,_and_Macro_domain-like


id: CL:2565
description: Protein of unknown function DUF5058, and Peptidase M20, dimerisation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2565_Protein_of_unknown_function_DUF5058,_and_Peptidase_M20,_dimerisation_domain


id: CL:2567
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2567_Mixed,_incl._Protein_of_unknown_function_DUF5058,_and_Succinyl-diaminopimelate_desuccinylase_activity

description:
  Mixed, incl. Protein of unknown function DUF5058, and Succinyl-diaminopimelate desuccinylase activity


id: CL:2587
description: Mixed, incl. PDZ domain 6, and Cysteine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2587_Mixed,_incl._PDZ_domain_6,_and_Cysteine_catabolic_process


id: CL:2600
description: Mixed, incl. Pantothenate biosynthesis, and Symporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2600_Mixed,_incl._Pantothenate_biosynthesis,_and_Symporter_activity


id: CL:2602
description: Mixed, incl. Citrate transporter, and Monocarboxylic acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2602_Mixed,_incl._Citrate_transporter,_and_Monocarboxylic_acid_transport


id: CL:2625
description: Mixed, incl. Iron-sulfur cluster assembly, and Cysteine desulfurase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2625_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Cysteine_desulfurase_activity


id: CL:2626
description: Mixed, incl. Iron-sulfur cluster assembly, and Efflux transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2626_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Efflux_transmembrane_transporter_activity


id: CL:2627
description: Iron-sulfur cluster assembly, and Cysteine desulfurase, SufS
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2627_Iron-sulfur_cluster_assembly,_and_Cysteine_desulfurase,_SufS


id: CL:2630
description: SUF system FeS cluster assembly, SufBD, and Cysteine desulfurase, SufS
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2630_SUF_system_FeS_cluster_assembly,_SufBD,_and_Cysteine_desulfurase,_SufS


id: CL:2643
description: Iron-sulfur cluster assembly, and AI-2E family transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2643_Iron-sulfur_cluster_assembly,_and_AI-2E_family_transporter


id: CL:2652
description: Mixed, incl. L-lysine transport, and RNA capping
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2652_Mixed,_incl._L-lysine_transport,_and_RNA_capping


id: CL:2653
description: Mixed, incl. L-lysine transport, and Peptidase U32
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2653_Mixed,_incl._L-lysine_transport,_and_Peptidase_U32


id: CL:2664
description: Mixed, incl. RNA capping, and Aldo-keto reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2664_Mixed,_incl._RNA_capping,_and_Aldo-keto_reductase


id: CL:2676
description: Mixed, incl. DsrE2-like family, and Lysyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2676_Mixed,_incl._DsrE2-like_family,_and_Lysyltransferase_activity


id: CL:2692
description: Mixed, incl. Base excision repair, and RNA methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2692_Mixed,_incl._Base_excision_repair,_and_RNA_methylation


id: CL:2693
description: Mixed, incl. Base excision repair, and RNA methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2693_Mixed,_incl._Base_excision_repair,_and_RNA_methylation


id: CL:2694
description: Mixed, incl. Base excision repair, and Cof family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2694_Mixed,_incl._Base_excision_repair,_and_Cof_family


id: CL:2697
description: Mixed, incl. Base excision repair, and Cof family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2697_Mixed,_incl._Base_excision_repair,_and_Cof_family


id: CL:2699
description: Mixed, incl. Armadillo-type fold, and S-methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2699_Mixed,_incl._Armadillo-type_fold,_and_S-methyltransferase_activity


id: CL:2713
description: Base-excision repair, and Xylose isomerase-like, TIM barrel domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2713_Base-excision_repair,_and_Xylose_isomerase-like,_TIM_barrel_domain


id: CL:2733
description: Mixed, incl. CheY-P phosphatase CheX-like, and Alkylbase DNA N-glycosylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2733_Mixed,_incl._CheY-P_phosphatase_CheX-like,_and_Alkylbase_DNA_N-glycosylase_activity


id: CL:2742
description: Mixed, incl. RsgA GTPase domain, and Symporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2742_Mixed,_incl._RsgA_GTPase_domain,_and_Symporter_activity


id: CL:275
description: Mixed, incl. Ribosomal small subunit biogenesis, and Polyprenol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:275_Mixed,_incl._Ribosomal_small_subunit_biogenesis,_and_Polyprenol_metabolic_process


id: CL:2751
description: Mixed, incl. Alditol metabolic process, and Lon protease
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2751_Mixed,_incl._Alditol_metabolic_process,_and_Lon_protease


id: CL:2753
description: Mixed, incl. DegV, C-terminal domain, and Cytidyltransferase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2753_Mixed,_incl._DegV,_C-terminal_domain,_and_Cytidyltransferase-like_domain


id: CL:2755
description: DegV, C-terminal domain, and Alkaline shock protein Asp23
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2755_DegV,_C-terminal_domain,_and_Alkaline_shock_protein_Asp23


id: CL:276
description: Mixed, incl. Polyprenol metabolic process, and De novo CTP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:276_Mixed,_incl._Polyprenol_metabolic_process,_and_De_novo_CTP_biosynthetic_process


id: CL:2775
description: Mostly uncharacterized, incl. Lon protease, and NUDIX hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2775_Mostly_uncharacterized,_incl._Lon_protease,_and_NUDIX_hydrolase


id: CL:2777
description: Mixed, incl. NUDIX hydrolase, and Homing endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2777_Mixed,_incl._NUDIX_hydrolase,_and_Homing_endonuclease


id: CL:2798
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2798_Mixed,_incl._Threonine/Serine_exporter,_ThrE,_and_Calcineurin-like_phosphoesterase_superfamily_domain

description:
  Mixed, incl. Threonine/Serine exporter, ThrE, and Calcineurin-like phosphoesterase superfamily domain


id: CL:2799
description: Mixed, incl. Calcineurin-like phosphoesterase superfamily domain, and Cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2799_Mixed,_incl._Calcineurin-like_phosphoesterase_superfamily_domain,_and_Cyclase_activity


id: CL:2802
description: Calcineurin-like phosphoesterase superfamily domain, and Cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2802_Calcineurin-like_phosphoesterase_superfamily_domain,_and_Cyclase_activity


id: CL:2820
description: Mixed, incl. Threonine/Serine exporter, ThrE, and Transcription regulators MarR/SlyA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2820_Mixed,_incl._Threonine/Serine_exporter,_ThrE,_and_Transcription_regulators_MarR/SlyA-like


id: CL:2837
description: Signal transduction, and Flagellar assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2837_Signal_transduction,_and_Flagellar_assembly


id: CL:2838
description: Signal transduction, and Flagellar assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2838_Signal_transduction,_and_Flagellar_assembly


id: CL:2839
description: Signal transduction, and Flagellar assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2839_Signal_transduction,_and_Flagellar_assembly


id: CL:2841
description: Signal transduction, and Flagellar assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2841_Signal_transduction,_and_Flagellar_assembly


id: CL:2843
description: Signal transduction, and Flagellar assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2843_Signal_transduction,_and_Flagellar_assembly


id: CL:2846
description: Phosphorelay signal transduction system, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2846_Phosphorelay_signal_transduction_system,_and_Diguanylate_cyclase


id: CL:2848
description: Phosphorelay signal transduction system, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2848_Phosphorelay_signal_transduction_system,_and_Diguanylate_cyclase


id: CL:2850
description: Nucleotide cyclase, and HD-GYP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2850_Nucleotide_cyclase,_and_HD-GYP_domain


id: CL:2854
description: Nucleotide cyclase, and GAF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2854_Nucleotide_cyclase,_and_GAF_domain


id: CL:2858
description: Diguanylate cyclase, and YcbB domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2858_Diguanylate_cyclase,_and_YcbB_domain


id: CL:288
description: Ribosomal small subunit biogenesis, and Initiation factor
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:288_Ribosomal_small_subunit_biogenesis,_and_Initiation_factor


id: CL:2887
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2887_Two-component_regulatory_system,_and_Signal_transduction_histidine_kinase-related_protein,_C-terminal

description:
  Two-component regulatory system, and Signal transduction histidine kinase-related protein, C-terminal


id: CL:2889
description: Two-component regulatory system
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2889_Two-component_regulatory_system


id: CL:2921
description: Molecular transducer activity, and CheW-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2921_Molecular_transducer_activity,_and_CheW-like_domain


id: CL:2939
description: Demethylation, and CheW-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2939_Demethylation,_and_CheW-like_domain


id: CL:2980
description: Cilium, and Bacterial-type flagellum assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2980_Cilium,_and_Bacterial-type_flagellum_assembly


id: CL:2986
description: Bacterial-type flagellum-dependent cell motility, and Bacterial flagellum protein export
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2986_Bacterial-type_flagellum-dependent_cell_motility,_and_Bacterial_flagellum_protein_export


id: CL:2987
description: Bacterial-type flagellum-dependent cell motility
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2987_Bacterial-type_flagellum-dependent_cell_motility


id: CL:2990
description: Bacterial-type flagellum basal body
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:2990_Bacterial-type_flagellum_basal_body


id: CL:3015
description: Bacterial flagellum protein export, and Bacterial flagellum
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3015_Bacterial_flagellum_protein_export,_and_Bacterial_flagellum


id: CL:3027
description: Bacterial-type flagellum hook, and SpoA-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3027_Bacterial-type_flagellum_hook,_and_SpoA-like_superfamily


id: CL:3071
description: Histidine kinase-like ATPase domain, and STAS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3071_Histidine_kinase-like_ATPase_domain,_and_STAS_domain


id: CL:3093
description: Mostly uncharacterized, incl. FlhB HrpN YscU SpaS Family, and Subunit ChlI of Mg-chelatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3093_Mostly_uncharacterized,_incl._FlhB_HrpN_YscU_SpaS_Family,_and_Subunit_ChlI_of_Mg-chelatase


id: CL:3095
description: Mixed, incl. FlhB HrpN YscU SpaS Family, and Subunit ChlI of Mg-chelatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3095_Mixed,_incl._FlhB_HrpN_YscU_SpaS_Family,_and_Subunit_ChlI_of_Mg-chelatase


id: CL:3121
description: Mixed, incl. Helix_turn_helix, arabinose operon control protein, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3121_Mixed,_incl._Helix_turn_helix,_arabinose_operon_control_protein,_and_Histidine_kinase


id: CL:3123
description: Mixed, incl. Histidine kinase, and LytTr DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3123_Mixed,_incl._Histidine_kinase,_and_LytTr_DNA-binding_domain


id: CL:3124
description: Histidine kinase, and Transcription regulator HTH, AraC- type
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3124_Histidine_kinase,_and_Transcription_regulator_HTH,_AraC-_type


id: CL:3126
description: Histidine kinase, and Transcription regulator HTH, AraC- type
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3126_Histidine_kinase,_and_Transcription_regulator_HTH,_AraC-_type


id: CL:314
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:314_tRNA_aminoacylation_for_protein_translation,_and_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity

description:
  tRNA aminoacylation for protein translation, and glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity


id: CL:3143
description: LytTr DNA-binding domain, and Sensor histidine kinase NatK, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3143_LytTr_DNA-binding_domain,_and_Sensor_histidine_kinase_NatK,_C-terminal_domain


id: CL:315
description: tRNA aminoacylation for protein translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:315_tRNA_aminoacylation_for_protein_translation


id: CL:3159
description: HTH domain AraC-type, conserved site, and Cupin 2, conserved barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3159_HTH_domain_AraC-type,_conserved_site,_and_Cupin_2,_conserved_barrel


id: CL:3171
description: HTH domain AraC-type, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3171_HTH_domain_AraC-type,_conserved_site


id: CL:3181
description: Polysaccharide deacetylase, and Two-component regulatory system
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3181_Polysaccharide_deacetylase,_and_Two-component_regulatory_system


id: CL:319
description: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:319_Aminoacyl-tRNA_synthetase,_class_Ia,_anticodon-binding


id: CL:3194
description: Mixed, incl. Organic phosphonate transport, and Folic acid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3194_Mixed,_incl._Organic_phosphonate_transport,_and_Folic_acid_catabolic_process


id: CL:3215
description: Mixed, incl. Polysaccharide biosynthetic process, and mRNA 5-UTR binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3215_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_mRNA_5-UTR_binding


id: CL:3217
description: O-Antigen nucleotide sugar biosynthesis, and NeuB family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3217_O-Antigen_nucleotide_sugar_biosynthesis,_and_NeuB_family


id: CL:3237
description: Mixed, incl. MacB, ATP-binding domain, and ABC3 transporter permease protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3237_Mixed,_incl._MacB,_ATP-binding_domain,_and_ABC3_transporter_permease_protein_domain


id: CL:3238
description: Mixed, incl. MacB, ATP-binding domain, and ABC3 transporter permease protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3238_Mixed,_incl._MacB,_ATP-binding_domain,_and_ABC3_transporter_permease_protein_domain


id: CL:3239
description: Mixed, incl. RND efflux pump, membrane fusion protein, and Outer membrane efflux protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3239_Mixed,_incl._RND_efflux_pump,_membrane_fusion_protein,_and_Outer_membrane_efflux_protein


id: CL:3241
description: Mixed, incl. RND efflux pump, membrane fusion protein, and Outer membrane efflux protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3241_Mixed,_incl._RND_efflux_pump,_membrane_fusion_protein,_and_Outer_membrane_efflux_protein


id: CL:3243
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3243_Outer_membrane_efflux_protein,_and_Multidrug_efflux_transporter_AcrB_TolC_docking_domain,_DN/DC_subdomains

description:
  Outer membrane efflux protein, and Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains


id: CL:3273
description: MacB, ATP-binding domain, and ABC3 transporter permease protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3273_MacB,_ATP-binding_domain,_and_ABC3_transporter_permease_protein_domain


id: CL:3275
description: MacB, ATP-binding domain, and ABC3 transporter permease protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3275_MacB,_ATP-binding_domain,_and_ABC3_transporter_permease_protein_domain


id: CL:3307
description: Mixed, incl. Fibronectin type III, and AcrB/AcrD/AcrF family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3307_Mixed,_incl._Fibronectin_type_III,_and_AcrB/AcrD/AcrF_family


id: CL:3326
description: Mixed, incl. Histidine kinase, and Helix_turn_helix, Lux Regulon
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3326_Mixed,_incl._Histidine_kinase,_and_Helix_turn_helix,_Lux_Regulon


id: CL:3341
description: Mostly uncharacterized, incl. Detection of stimulus, and Regulation of signaling
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3341_Mostly_uncharacterized,_incl._Detection_of_stimulus,_and_Regulation_of_signaling


id: CL:3343
description: Mixed, incl. Regulation of signaling, and Cache 3/Cache 2 fusion domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3343_Mixed,_incl._Regulation_of_signaling,_and_Cache_3/Cache_2_fusion_domain


id: CL:336
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:336_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_Aspartyl/Asparaginyl-tRNA_synthetase,_class_IIb

description:
  glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and Aspartyl/Asparaginyl-tRNA synthetase, class IIb


id: CL:3363
description: ABC transporter substrate binding protein, and ABC transporter, lipoprotein release, LolD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3363_ABC_transporter_substrate_binding_protein,_and_ABC_transporter,_lipoprotein_release,_LolD-like


id: CL:3375
description: Mixed, incl. Amino acid transport, and Iron dependent repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3375_Mixed,_incl._Amino_acid_transport,_and_Iron_dependent_repressor


id: CL:3377
description: Mixed, incl. CobW/HypB/UreG, nucleotide-binding domain, and DTXR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3377_Mixed,_incl._CobW/HypB/UreG,_nucleotide-binding_domain,_and_DTXR-type_HTH_domain


id: CL:3378
description: Mixed, incl. DTXR-type HTH domain, and ABC transporter, TroCD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3378_Mixed,_incl._DTXR-type_HTH_domain,_and_ABC_transporter,_TroCD-like


id: CL:3380
description: ABC transporter, TroCD-like, and Adhesin B
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3380_ABC_transporter,_TroCD-like,_and_Adhesin_B


id: CL:3392
description: Mixed, incl. CobW/HypB/UreG, nucleotide-binding domain, and Adhesin B
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3392_Mixed,_incl._CobW/HypB/UreG,_nucleotide-binding_domain,_and_Adhesin_B


id: CL:3406
description: CobW/HypB/UreG, nucleotide-binding domain, and Protein of unknown function DUF1980
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3406_CobW/HypB/UreG,_nucleotide-binding_domain,_and_Protein_of_unknown_function_DUF1980


id: CL:3427
description: Mixed, incl. UROD/MetE-like superfamily, and Ligand-gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3427_Mixed,_incl._UROD/MetE-like_superfamily,_and_Ligand-gated_channel_activity


id: CL:3428
description: Mixed, incl. UROD/MetE-like superfamily, and Ligand-gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3428_Mixed,_incl._UROD/MetE-like_superfamily,_and_Ligand-gated_channel_activity


id: CL:3431
description: UROD/MetE-like superfamily, and S-methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3431_UROD/MetE-like_superfamily,_and_S-methyltransferase_activity


id: CL:3447
description: Ligand-gated channel activity, and Amino acid ABC transporter, permease protein, 3-TM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3447_Ligand-gated_channel_activity,_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain


id: CL:3459
description: MarR-type HTH domain, and ABC transporter transmembrane region
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3459_MarR-type_HTH_domain,_and_ABC_transporter_transmembrane_region


id: CL:3468
description: Mixed, incl. Lysine degradation, and D-Arginine and D-ornithine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3468_Mixed,_incl._Lysine_degradation,_and_D-Arginine_and_D-ornithine_metabolism


id: CL:3471
description: Mixed, incl. D-Arginine and D-ornithine metabolism, and Xaa-Arg dipeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3471_Mixed,_incl._D-Arginine_and_D-ornithine_metabolism,_and_Xaa-Arg_dipeptidase


id: CL:3474
description: D-Arginine and D-ornithine metabolism, and Ornithine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3474_D-Arginine_and_D-ornithine_metabolism,_and_Ornithine_metabolic_process


id: CL:3500
description: Lysine degradation, and Toxin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3500_Lysine_degradation,_and_Toxin_metabolic_process


id: CL:3503
description: Aspartate family amino acid catabolic process, and Regulation of DNA recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3503_Aspartate_family_amino_acid_catabolic_process,_and_Regulation_of_DNA_recombination


id: CL:3524
description: Mostly uncharacterized, incl. Protein serine/threonine kinase activity, and MgtC family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3524_Mostly_uncharacterized,_incl._Protein_serine/threonine_kinase_activity,_and_MgtC_family


id: CL:3525
description: Mostly uncharacterized, incl. MgtC family, and Peptidase M3A/M3B
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3525_Mostly_uncharacterized,_incl._MgtC_family,_and_Peptidase_M3A/M3B


id: CL:3527
description: Mixed, incl. Peptidase M3A/M3B, and Forkhead-associated (FHA) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3527_Mixed,_incl._Peptidase_M3A/M3B,_and_Forkhead-associated_(FHA)_domain


id: CL:354
description: Mixed, incl. RNA helicase activity, and RNA methyltransferase TrmH family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:354_Mixed,_incl._RNA_helicase_activity,_and_RNA_methyltransferase_TrmH_family


id: CL:3547
description: Mixed, incl. Protein serine/threonine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3547_Mixed,_incl._Protein_serine/threonine_kinase_activity


id: CL:3562
description: Tetrapyrrole metabolic process, and Vitamin transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3562_Tetrapyrrole_metabolic_process,_and_Vitamin_transport


id: CL:3563
description: Tetrapyrrole metabolic process, and Vitamin transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3563_Tetrapyrrole_metabolic_process,_and_Vitamin_transport


id: CL:3573
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3573_Protein_methyltransferase_activity,_and_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor

description:
  Protein methyltransferase activity, and Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor


id: CL:3627
description: Vitamin transport, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3627_Vitamin_transport,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:3630
description: BioY family, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3630_BioY_family,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:3663
description: Mixed, incl. Transition metal ion transport, and Ferrous iron transporter FeoA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3663_Mixed,_incl._Transition_metal_ion_transport,_and_Ferrous_iron_transporter_FeoA_domain


id: CL:3664
description: Mixed, incl. Heavy-metal-associated domain, and Penicillinase repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3664_Mixed,_incl._Heavy-metal-associated_domain,_and_Penicillinase_repressor


id: CL:3665
description: Mixed, incl. Heavy-metal-associated domain, and Glycine cleavage system P protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3665_Mixed,_incl._Heavy-metal-associated_domain,_and_Glycine_cleavage_system_P_protein


id: CL:3666
description: Mixed, incl. Heavy-metal-associated domain, and Metal-sensitive transcriptional repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3666_Mixed,_incl._Heavy-metal-associated_domain,_and_Metal-sensitive_transcriptional_repressor


id: CL:3668
description: Heavy-metal-associated domain, and Metal-sensitive transcriptional repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3668_Heavy-metal-associated_domain,_and_Metal-sensitive_transcriptional_repressor


id: CL:3686
description: Glycine cleavage system P protein, and AcoX-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3686_Glycine_cleavage_system_P_protein,_and_AcoX-like


id: CL:3703
description: Penicillinase repressor, and Peptidase M56
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3703_Penicillinase_repressor,_and_Peptidase_M56


id: CL:3718
description: Mixed, incl. Iron ion transmembrane transport, and Ferrous iron transporter FeoA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3718_Mixed,_incl._Iron_ion_transmembrane_transport,_and_Ferrous_iron_transporter_FeoA_domain


id: CL:3721
description: Mixed, incl. Ferrous iron transporter FeoA domain, and Flavodoxin, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3721_Mixed,_incl._Ferrous_iron_transporter_FeoA_domain,_and_Flavodoxin,_conserved_site


id: CL:3746
description: Mixed, incl. ABC transporters, and Metal cluster binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3746_Mixed,_incl._ABC_transporters,_and_Metal_cluster_binding


id: CL:3747
description: Mixed, incl. ABC transporters, and Microbial metabolism in diverse environments
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3747_Mixed,_incl._ABC_transporters,_and_Microbial_metabolism_in_diverse_environments


id: CL:3748
description: Mixed, incl. ABC transporters, and Molybdopterin cofactor metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3748_Mixed,_incl._ABC_transporters,_and_Molybdopterin_cofactor_metabolic_process


id: CL:3749
description: Mixed, incl. ABC transporters, and Molybdopterin cofactor metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3749_Mixed,_incl._ABC_transporters,_and_Molybdopterin_cofactor_metabolic_process


id: CL:3750
description: Mixed, incl. ABC transporters, and Molybdopterin cofactor metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3750_Mixed,_incl._ABC_transporters,_and_Molybdopterin_cofactor_metabolic_process


id: CL:3751
description: Mixed, incl. Molybdopterin cofactor metabolic process, and Molybdate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3751_Mixed,_incl._Molybdopterin_cofactor_metabolic_process,_and_Molybdate_ion_transport


id: CL:3752
description: Mixed, incl. Molybdopterin cofactor metabolic process, and TAT protein transport complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3752_Mixed,_incl._Molybdopterin_cofactor_metabolic_process,_and_TAT_protein_transport_complex


id: CL:3753
description: Molybdopterin cofactor metabolic process, and Molybdate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3753_Molybdopterin_cofactor_metabolic_process,_and_Molybdate_ion_transport


id: CL:3755
description: Molybdopterin cofactor metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3755_Molybdopterin_cofactor_metabolic_process


id: CL:377
description: DNA-directed RNA polymerase, and Helicase superfamily c-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:377_DNA-directed_RNA_polymerase,_and_Helicase_superfamily_c-terminal_domain


id: CL:3775
description: Molybdopterin cofactor binding, and TorD-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3775_Molybdopterin_cofactor_binding,_and_TorD-like_superfamily


id: CL:3793
description: Mostly uncharacterized, incl. FMN-binding split barrel, and Putative heavy-metal chelation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3793_Mostly_uncharacterized,_incl._FMN-binding_split_barrel,_and_Putative_heavy-metal_chelation


id: CL:3794
description: Mixed, incl. Putative heavy-metal chelation, and Peptidase M20C, Xaa-His dipeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3794_Mixed,_incl._Putative_heavy-metal_chelation,_and_Peptidase_M20C,_Xaa-His_dipeptidase


id: CL:380
description: DNA-directed RNA polymerase, and Helicase superfamily c-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:380_DNA-directed_RNA_polymerase,_and_Helicase_superfamily_c-terminal_domain


id: CL:3807
description: Mixed, incl. FMN-binding split barrel, and tRNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3807_Mixed,_incl._FMN-binding_split_barrel,_and_tRNA-binding_domain


id: CL:3816
description: Mixed, incl. ABC-type polyamine transporter activity, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3816_Mixed,_incl._ABC-type_polyamine_transporter_activity,_and_Sulfur_metabolism


id: CL:3817
description: Mixed, incl. ABC-type polyamine transporter activity, and Transmembrane protein TMEM64
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3817_Mixed,_incl._ABC-type_polyamine_transporter_activity,_and_Transmembrane_protein_TMEM64


id: CL:3818
description: Mixed, incl. Transmembrane protein TMEM64, and ABC-type polyamine transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3818_Mixed,_incl._Transmembrane_protein_TMEM64,_and_ABC-type_polyamine_transporter_activity


id: CL:3820
description: Mixed, incl. Transmembrane protein TMEM64, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3820_Mixed,_incl._Transmembrane_protein_TMEM64,_and_4Fe-4S_dicluster_domain


id: CL:3840
description: Polyamine transport, and ABC-type polyamine transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3840_Polyamine_transport,_and_ABC-type_polyamine_transporter_activity


id: CL:3857
description: SsuA/THI5-like, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3857_SsuA/THI5-like,_and_Sulfur_metabolism


id: CL:3859
description: SsuA/THI5-like, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3859_SsuA/THI5-like,_and_Sulfur_metabolism


id: CL:3879
description: Mixed, incl. Heme transport, and ABC transporter, permease protein, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3879_Mixed,_incl._Heme_transport,_and_ABC_transporter,_permease_protein,_BtuC-like


id: CL:3880
description: Mixed, incl. Heme transport, and ABC transporter, permease protein, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3880_Mixed,_incl._Heme_transport,_and_ABC_transporter,_permease_protein,_BtuC-like


id: CL:3882
description: Heme transport, and ABC transporter, permease protein, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3882_Heme_transport,_and_ABC_transporter,_permease_protein,_BtuC-like


id: CL:3884
description: Heme transport, and ABC transporter, permease protein, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3884_Heme_transport,_and_ABC_transporter,_permease_protein,_BtuC-like


id: CL:3908
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors, and ABC 3 transport family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3908_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_and_ABC_3_transport_family


id: CL:3925
description: Mixed, incl. Nickel cation binding, and Domain of unknown function DUF1858
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3925_Mixed,_incl._Nickel_cation_binding,_and_Domain_of_unknown_function_DUF1858


id: CL:3927
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3927_Mixed,_incl._CobB/CobQ-like_glutamine_amidotransferase_domain,_and_Degradation_of_aromatic_compounds

description:
  Mixed, incl. CobB/CobQ-like glutamine amidotransferase domain, and Degradation of aromatic compounds


id: CL:3946
description: Mixed, incl. LysR, substrate-binding, and DUF218 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3946_Mixed,_incl._LysR,_substrate-binding,_and_DUF218_domain


id: CL:3947
description: Mixed, incl. LysR, substrate-binding, and Single-stranded RNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3947_Mixed,_incl._LysR,_substrate-binding,_and_Single-stranded_RNA_binding


id: CL:3962
description: Mixed, incl. LysR substrate binding domain, and DUF218 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3962_Mixed,_incl._LysR_substrate_binding_domain,_and_DUF218_domain


id: CL:3973
description: Mixed, incl. Aromatic compound catabolic process, and FldB/FldC dehydratase alpha/beta subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3973_Mixed,_incl._Aromatic_compound_catabolic_process,_and_FldB/FldC_dehydratase_alpha/beta_subunit


id: CL:3974
description: Aromatic compound catabolic process, and Bacterial microcompartment
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3974_Aromatic_compound_catabolic_process,_and_Bacterial_microcompartment


id: CL:3975
description: Mixed, incl. Bacterial microcompartment, and Flavoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3975_Mixed,_incl._Bacterial_microcompartment,_and_Flavoprotein


id: CL:3977
description: Bacterial microcompartment, and Adenine deaminase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3977_Bacterial_microcompartment,_and_Adenine_deaminase


id: CL:3989
description: Cellular ketone metabolic process, and Flavoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3989_Cellular_ketone_metabolic_process,_and_Flavoprotein


id: CL:3999
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor, and [2Fe-2S]-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:3999_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor,_and_[2Fe-2S]-binding


id: CL:4020
description: CoA enzyme activase uncharacterised domain (DUF2229), and CoA enzyme activase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4020_CoA_enzyme_activase_uncharacterised_domain_(DUF2229),_and_CoA_enzyme_activase


id: CL:4034
description: Mixed, incl. Phosphate ion transport, and Nitrogen fixation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4034_Mixed,_incl._Phosphate_ion_transport,_and_Nitrogen_fixation


id: CL:4035
description: Mixed, incl. Phosphate ion transport, and Nitrogen fixation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4035_Mixed,_incl._Phosphate_ion_transport,_and_Nitrogen_fixation


id: CL:4036
description: Phosphate ion transport, and MTH1175 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4036_Phosphate_ion_transport,_and_MTH1175_domain


id: CL:4056
description: MTH1175 domain, and CobQ/CobB/MinD/ParA nucleotide binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4056_MTH1175_domain,_and_CobQ/CobB/MinD/ParA_nucleotide_binding_domain


id: CL:4069
description: Mixed, incl. RNA ligase activity, and Acetyltransferase (GNAT) family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4069_Mixed,_incl._RNA_ligase_activity,_and_Acetyltransferase_(GNAT)_family


id: CL:4080
description: Mixed, incl. Selenium, and tRNA wobble uridine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4080_Mixed,_incl._Selenium,_and_tRNA_wobble_uridine_modification


id: CL:4082
description: Mixed, incl. Sulfur carrier activity, and Crp-like helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4082_Mixed,_incl._Sulfur_carrier_activity,_and_Crp-like_helix-turn-helix_domain


id: CL:4096
description: Selenium, and Translational readthrough
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4096_Selenium,_and_Translational_readthrough


id: CL:4105
description: Mostly uncharacterized, incl. Ferritin-like superfamily, and Phosphoric ester hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4105_Mostly_uncharacterized,_incl._Ferritin-like_superfamily,_and_Phosphoric_ester_hydrolase_activity


id: CL:4106
description: Mostly uncharacterized, incl. Ferritin-like superfamily, and GerMN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4106_Mostly_uncharacterized,_incl._Ferritin-like_superfamily,_and_GerMN_domain


id: CL:4108
description: Mixed, incl. GerMN domain, and RNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4108_Mixed,_incl._GerMN_domain,_and_RNA_ligase_activity


id: CL:4128
description: Mixed, incl. Ferritin-like superfamily, and Peptidase S58, DmpA
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4128_Mixed,_incl._Ferritin-like_superfamily,_and_Peptidase_S58,_DmpA


id: CL:414
description: Protein folding, and ATPase, AAA-type, core
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:414_Protein_folding,_and_ATPase,_AAA-type,_core


id: CL:4142
description: Mixed, incl. MmgE/PrpD superfamily, and Arachidonic acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4142_Mixed,_incl._MmgE/PrpD_superfamily,_and_Arachidonic_acid_metabolism


id: CL:415
description: Unfolded protein binding, and Stress response
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:415_Unfolded_protein_binding,_and_Stress_response


id: CL:4156
description: Mixed, incl. Glutamine family amino acid metabolic process, and Amine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4156_Mixed,_incl._Glutamine_family_amino_acid_metabolic_process,_and_Amine_metabolic_process


id: CL:4157
description: Mixed, incl. Glutamine family amino acid metabolic process, and Amine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4157_Mixed,_incl._Glutamine_family_amino_acid_metabolic_process,_and_Amine_metabolic_process


id: CL:4158
description: Mixed, incl. Glutamine family amino acid metabolic process, and Polyamine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4158_Mixed,_incl._Glutamine_family_amino_acid_metabolic_process,_and_Polyamine_metabolic_process


id: CL:4159
description: Mixed, incl. Polyamine metabolic process, and Ureohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4159_Mixed,_incl._Polyamine_metabolic_process,_and_Ureohydrolase


id: CL:4160
description: Mixed, incl. Polyamine metabolic process, and Ureohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4160_Mixed,_incl._Polyamine_metabolic_process,_and_Ureohydrolase


id: CL:4162
description: Polyamine metabolic process, and Ureohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4162_Polyamine_metabolic_process,_and_Ureohydrolase


id: CL:417
description: Unfolded protein binding, and Stress response
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:417_Unfolded_protein_binding,_and_Stress_response


id: CL:4178
description: Mixed, incl. dUMP metabolic process, and VanW like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4178_Mixed,_incl._dUMP_metabolic_process,_and_VanW_like_protein


id: CL:4191
description: Asp/Glu racemase, and Asparagine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4191_Asp/Glu_racemase,_and_Asparagine_metabolic_process


id: CL:420
description: Protein folding chaperone, and Stress response
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:420_Protein_folding_chaperone,_and_Stress_response


id: CL:4201
description: Histidine metabolism, and Response to temperature stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4201_Histidine_metabolism,_and_Response_to_temperature_stimulus


id: CL:4218
description: Mixed, incl. Glutamate-cysteine ligase activity, and Alanine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4218_Mixed,_incl._Glutamate-cysteine_ligase_activity,_and_Alanine_metabolic_process


id: CL:4220
description: Alanine metabolic process, and glycerol-3-phosphate dehydrogenase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4220_Alanine_metabolic_process,_and_glycerol-3-phosphate_dehydrogenase_complex


id: CL:4233
description: Mixed, incl. Glutamate-cysteine ligase activity, and Peptidase M19
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4233_Mixed,_incl._Glutamate-cysteine_ligase_activity,_and_Peptidase_M19


id: CL:4250
description: Mixed, incl. adenosylmethionine-8-amino-7-oxononanoate transaminase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4250_Mixed,_incl._adenosylmethionine-8-amino-7-oxononanoate_transaminase_activity


id: CL:4259
description: Mixed, incl. GntR, C-terminal, and Bacterial transcriptional regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4259_Mixed,_incl._GntR,_C-terminal,_and_Bacterial_transcriptional_regulator


id: CL:4260
description: Mixed, incl. GntR, C-terminal, and Bacterial transcriptional regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4260_Mixed,_incl._GntR,_C-terminal,_and_Bacterial_transcriptional_regulator


id: CL:4262
description: Mixed, incl. GntR, C-terminal, and Bacterial transcriptional regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4262_Mixed,_incl._GntR,_C-terminal,_and_Bacterial_transcriptional_regulator


id: CL:4263
description: Mixed, incl. GntR, C-terminal, and Bacterial transcriptional regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4263_Mixed,_incl._GntR,_C-terminal,_and_Bacterial_transcriptional_regulator


id: CL:4264
description: GntR, C-terminal, and Bacterial transcriptional regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4264_GntR,_C-terminal,_and_Bacterial_transcriptional_regulator


id: CL:4275
description: Mixed, incl. Receptor, and Creatinase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4275_Mixed,_incl._Receptor,_and_Creatinase,_N-terminal


id: CL:4284
description: Mixed, incl. tRNA 3-trailer cleavage, and (Uracil-5)-methyltransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4284_Mixed,_incl._tRNA_3-trailer_cleavage,_and_(Uracil-5)-methyltransferase_family


id: CL:4303
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4303_Mixed,_incl._Oxo-acid-lyase_activity,_and_Phosphotransferase_activity,_for_other_substituted_phosphate_groups

description:
  Mixed, incl. Oxo-acid-lyase activity, and Phosphotransferase activity, for other substituted phosphate groups


id: CL:4305
description: Mixed, incl. Oxo-acid-lyase activity, and Acyl carrier activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4305_Mixed,_incl._Oxo-acid-lyase_activity,_and_Acyl_carrier_activity


id: CL:4324
description: Mixed, incl. Xenobiotic transport, and Nucleoplasm
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4324_Mixed,_incl._Xenobiotic_transport,_and_Nucleoplasm


id: CL:4325
description: Mixed, incl. Xenobiotic transport, and Nucleoplasm
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4325_Mixed,_incl._Xenobiotic_transport,_and_Nucleoplasm


id: CL:4327
description: Mostly uncharacterized, incl. ABC-2 transporter-like, and WYL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4327_Mostly_uncharacterized,_incl._ABC-2_transporter-like,_and_WYL_domain


id: CL:4328
description: Mixed, incl. ABC-2 transporter-like, and WYL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4328_Mixed,_incl._ABC-2_transporter-like,_and_WYL_domain


id: CL:4329
description: Mixed, incl. ABC-2 transporter-like, and WYL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4329_Mixed,_incl._ABC-2_transporter-like,_and_WYL_domain


id: CL:4340
description: Mixed, incl. Lanthionine synthetase C-like, and Domain of unknown function (DUF4135)
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4340_Mixed,_incl._Lanthionine_synthetase_C-like,_and_Domain_of_unknown_function_(DUF4135)


id: CL:4349
description: Mixed, incl. Endoribonuclease L-PSP, and Homeobox-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4349_Mixed,_incl._Endoribonuclease_L-PSP,_and_Homeobox-like_domain_superfamily


id: CL:4365
description: Xenobiotic transport, and Nucleoplasm
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4365_Xenobiotic_transport,_and_Nucleoplasm


id: CL:4366
description: Xenobiotic transport, and 5-methylthioadenosine deaminase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4366_Xenobiotic_transport,_and_5-methylthioadenosine_deaminase_activity


id: CL:4392
description: Mixed, incl. ADP-ribosylglycohydrolase, and Transcription regulator HTH-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4392_Mixed,_incl._ADP-ribosylglycohydrolase,_and_Transcription_regulator_HTH-like


id: CL:4404
description: Mostly uncharacterized, incl. BSD domain, and Fido domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4404_Mostly_uncharacterized,_incl._BSD_domain,_and_Fido_domain


id: CL:4405
description: Mixed, incl. GDP metabolic process, and Protein kinase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4405_Mixed,_incl._GDP_metabolic_process,_and_Protein_kinase_domain


id: CL:4421
description: Mixed, incl. BSD domain, and UmuC domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4421_Mixed,_incl._BSD_domain,_and_UmuC_domain


id: CL:4437
description: Mostly uncharacterized, incl. DNA metabolic process, and Peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4437_Mostly_uncharacterized,_incl._DNA_metabolic_process,_and_Peptidase_activity


id: CL:4438
description: Mostly uncharacterized, incl. Catalytic activity, acting on DNA, and Amidine-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4438_Mostly_uncharacterized,_incl._Catalytic_activity,_acting_on_DNA,_and_Amidine-lyase_activity


id: CL:4439
description: Mixed, incl. Catalytic activity, acting on DNA, and Amidine-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4439_Mixed,_incl._Catalytic_activity,_acting_on_DNA,_and_Amidine-lyase_activity


id: CL:4440
description: Mixed, incl. Catalytic activity, acting on DNA, and Amidine-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4440_Mixed,_incl._Catalytic_activity,_acting_on_DNA,_and_Amidine-lyase_activity


id: CL:4441
description: Mixed, incl. Catalytic activity, acting on DNA, and Bacterial secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4441_Mixed,_incl._Catalytic_activity,_acting_on_DNA,_and_Bacterial_secretion_system


id: CL:4442
description: Mostly uncharacterized, incl. Bacterial secretion system, and Protein of unknown function DUF6133
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4442_Mostly_uncharacterized,_incl._Bacterial_secretion_system,_and_Protein_of_unknown_function_DUF6133


id: CL:4443
description: Mostly uncharacterized, incl. Bacterial secretion system, and Protein of unknown function DUF6133
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4443_Mostly_uncharacterized,_incl._Bacterial_secretion_system,_and_Protein_of_unknown_function_DUF6133


id: CL:4444
description: Mixed, incl. Protein of unknown function DUF6133, and Type II/IV secretion system protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4444_Mixed,_incl._Protein_of_unknown_function_DUF6133,_and_Type_II/IV_secretion_system_protein


id: CL:4445
description: Mixed, incl. Protein of unknown function DUF6133, and YodL-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4445_Mixed,_incl._Protein_of_unknown_function_DUF6133,_and_YodL-like


id: CL:4448
description: Mixed, incl. Protein of unknown function DUF6133, and Protein of unknown function DUF4320
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4448_Mixed,_incl._Protein_of_unknown_function_DUF6133,_and_Protein_of_unknown_function_DUF4320


id: CL:4452
description: Mixed, incl. Flp pilus assembly protein RcpC/CpaB, and Type II/IV secretion system protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4452_Mixed,_incl._Flp_pilus_assembly_protein_RcpC/CpaB,_and_Type_II/IV_secretion_system_protein


id: CL:4475
description: Mixed, incl. Type II/IV secretion system protein, and Protein of unknown function DUF4320
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4475_Mixed,_incl._Type_II/IV_secretion_system_protein,_and_Protein_of_unknown_function_DUF4320


id: CL:4478
description: Mixed, incl. Protein of unknown function DUF4320, and Flp pilus assembly protein RcpC/CpaB
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4478_Mixed,_incl._Protein_of_unknown_function_DUF4320,_and_Flp_pilus_assembly_protein_RcpC/CpaB


id: CL:448
description: UVR domain, and Large family of predicted nucleotide-binding domains
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:448_UVR_domain,_and_Large_family_of_predicted_nucleotide-binding_domains


id: CL:4495
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4495_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF6045,_and_Protein_of_unknown_function_DUF6103

description:
  Mostly uncharacterized, incl. Protein of unknown function DUF6045, and Protein of unknown function DUF6103


id: CL:4496
description: Mixed, incl. Protein of unknown function DUF6045, and Protein of unknown function DUF3852
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4496_Mixed,_incl._Protein_of_unknown_function_DUF6045,_and_Protein_of_unknown_function_DUF3852


id: CL:4498
description: Mixed, incl. YodL-like, and DNA primase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4498_Mixed,_incl._YodL-like,_and_DNA_primase_activity


id: CL:4499
description: Mixed, incl. DNA primase activity, and Type IV secretion system protein TraG/VirD4
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4499_Mixed,_incl._DNA_primase_activity,_and_Type_IV_secretion_system_protein_TraG/VirD4


id: CL:4508
description: Mixed, incl. YodL-like, and Helicase HerA, central domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4508_Mixed,_incl._YodL-like,_and_Helicase_HerA,_central_domain


id: CL:4520
description: Mixed, incl. Protein of unknown function DUF6045, and Protein of unknown function DUF3852
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4520_Mixed,_incl._Protein_of_unknown_function_DUF6045,_and_Protein_of_unknown_function_DUF3852


id: CL:4530
description: Protein of unknown function DUF6103, and NlpC/P60 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4530_Protein_of_unknown_function_DUF6103,_and_NlpC/P60_family


id: CL:4543
description: Mixed, incl. Amidine-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4543_Mixed,_incl._Amidine-lyase_activity


id: CL:4558
description: Recombinase zinc beta ribbon domain, and C-5 methylation of cytosine
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4558_Recombinase_zinc_beta_ribbon_domain,_and_C-5_methylation_of_cytosine


id: CL:4560
description: Recombinase zinc beta ribbon domain, and Protein of unknown function DUF4406
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4560_Recombinase_zinc_beta_ribbon_domain,_and_Protein_of_unknown_function_DUF4406


id: CL:457
description: Mixed, incl. Mismatch repair, and DNA repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:457_Mixed,_incl._Mismatch_repair,_and_DNA_repair


id: CL:458
description: Mixed, incl. DNA replication, and Nucleotide excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:458_Mixed,_incl._DNA_replication,_and_Nucleotide_excision_repair


id: CL:4584
description: Mixed, incl. Amidine-lyase activity, and (Uracil-5)-methyltransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4584_Mixed,_incl._Amidine-lyase_activity,_and_(Uracil-5)-methyltransferase_family


id: CL:4587
description: Mixed, incl. Amidine-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4587_Mixed,_incl._Amidine-lyase_activity


id: CL:459
description: Mixed, incl. DNA replication, and Nucleotide-excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:459_Mixed,_incl._DNA_replication,_and_Nucleotide-excision_repair


id: CL:4609
description: Mixed, incl. DNA methylase, C-5 cytosine-specific, active site, and IrrE N-terminal-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4609_Mixed,_incl._DNA_methylase,_C-5_cytosine-specific,_active_site,_and_IrrE_N-terminal-like_domain


id: CL:461
description: Nucleotide excision repair, and Damaged DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:461_Nucleotide_excision_repair,_and_Damaged_DNA_binding


id: CL:4622
description: Mixed, incl. TadE-like, and Flp/Fap pilin component
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4622_Mixed,_incl._TadE-like,_and_Flp/Fap_pilin_component


id: CL:4625
description: Mixed, incl. Regulation of cell death, and Type II secretion system (T2SS), protein F
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4625_Mixed,_incl._Regulation_of_cell_death,_and_Type_II_secretion_system_(T2SS),_protein_F


id: CL:4629
description: Type II secretion system (T2SS), protein F, and Flp pilus assembly protein RcpC/CpaB
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4629_Type_II_secretion_system_(T2SS),_protein_F,_and_Flp_pilus_assembly_protein_RcpC/CpaB


id: CL:463
description: Mixed, incl. DExx box DNA helicase domain superfamily, and DNA topoisomerase III
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:463_Mixed,_incl._DExx_box_DNA_helicase_domain_superfamily,_and_DNA_topoisomerase_III


id: CL:4655
description: Mixed, incl. Extracellular region, and Peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4655_Mixed,_incl._Extracellular_region,_and_Peptidase_activity


id: CL:4656
description: Mixed, incl. Extracellular region, and Serine-type endopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4656_Mixed,_incl._Extracellular_region,_and_Serine-type_endopeptidase_activity


id: CL:4657
description: Mixed, incl. Serine-type endopeptidase activity, and Extracellular region
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4657_Mixed,_incl._Serine-type_endopeptidase_activity,_and_Extracellular_region


id: CL:4660
description: Mostly uncharacterized, incl. Host cell, and Serine dehydrogenase proteinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4660_Mostly_uncharacterized,_incl._Host_cell,_and_Serine_dehydrogenase_proteinase


id: CL:4663
description: Mixed, incl. Host cell, and Serine dehydrogenase proteinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4663_Mixed,_incl._Host_cell,_and_Serine_dehydrogenase_proteinase


id: CL:4690
description: Mixed, incl. Fibronectin type III, and Xylene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4690_Mixed,_incl._Fibronectin_type_III,_and_Xylene_degradation


id: CL:4706
description: Mixed, incl. Glycoside hydrolase superfamily, and Subtilase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4706_Mixed,_incl._Glycoside_hydrolase_superfamily,_and_Subtilase_family


id: CL:4708
description: Mixed, incl. Glycoside hydrolase superfamily, and Subtilase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4708_Mixed,_incl._Glycoside_hydrolase_superfamily,_and_Subtilase_family


id: CL:4709
description: Mixed, incl. Subtilase family, and FtsK domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4709_Mixed,_incl._Subtilase_family,_and_FtsK_domain


id: CL:4712
description: Mixed, incl. Subtilase family, and DnaD-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4712_Mixed,_incl._Subtilase_family,_and_DnaD-like_domain_superfamily


id: CL:4729
description: Glycoside hydrolase superfamily, and Polysaccharide deacetylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4729_Glycoside_hydrolase_superfamily,_and_Polysaccharide_deacetylase


id: CL:4747
description: Mostly uncharacterized, incl. Viral process, and Armadillo-type fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4747_Mostly_uncharacterized,_incl._Viral_process,_and_Armadillo-type_fold


id: CL:4748
description: Mostly uncharacterized, incl. Viral process, and Armadillo-type fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4748_Mostly_uncharacterized,_incl._Viral_process,_and_Armadillo-type_fold


id: CL:4749
description: Mostly uncharacterized, incl. Viral process, and Phage protein (N4 Gp49/phage Sf6 gene 66) family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4749_Mostly_uncharacterized,_incl._Viral_process,_and_Phage_protein_(N4_Gp49/phage_Sf6_gene_66)_family


id: CL:4771
description: Mixed, incl. Viral process, and Armadillo-type fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4771_Mixed,_incl._Viral_process,_and_Armadillo-type_fold


id: CL:4787
description: Mixed, incl. Transposase activity, and Extracellular region
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4787_Mixed,_incl._Transposase_activity,_and_Extracellular_region


id: CL:4798
description: Mixed, incl. RNA polymerase sigma-70 like, and Lipoprotein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4798_Mixed,_incl._RNA_polymerase_sigma-70_like,_and_Lipoprotein_transport


id: CL:4799
description: Mixed, incl. RNA polymerase sigma-70 like, and Lipoprotein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4799_Mixed,_incl._RNA_polymerase_sigma-70_like,_and_Lipoprotein_transport


id: CL:4800
description: Mixed, incl. RNA polymerase sigma-70 like, and Lipoprotein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4800_Mixed,_incl._RNA_polymerase_sigma-70_like,_and_Lipoprotein_transport


id: CL:4801
description: Mixed, incl. RNA polymerase sigma-70 like, and Lipoprotein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4801_Mixed,_incl._RNA_polymerase_sigma-70_like,_and_Lipoprotein_transport


id: CL:4802
description: Mixed, incl. RNA polymerase sigma-70 like, and Lipoprotein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4802_Mixed,_incl._RNA_polymerase_sigma-70_like,_and_Lipoprotein_transport


id: CL:4804
description: RNA polymerase sigma-70 like, and Lipoprotein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4804_RNA_polymerase_sigma-70_like,_and_Lipoprotein_transport


id: CL:4806
description: Sigma-70, region 4, and Lipoprotein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4806_Sigma-70,_region_4,_and_Lipoprotein_transport


id: CL:4831
description: Mixed, incl. Cell cycle protein, and Transcription regulator PadR, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4831_Mixed,_incl._Cell_cycle_protein,_and_Transcription_regulator_PadR,_N-terminal


id: CL:4843
description: Mixed, incl. PdaC/RsiV-like superfamily, and RNA polymerase sigma-70 like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4843_Mixed,_incl._PdaC/RsiV-like_superfamily,_and_RNA_polymerase_sigma-70_like


id: CL:4845
description: Mixed, incl. Sigma-70, region 4, and Papain-like cysteine peptidase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4845_Mixed,_incl._Sigma-70,_region_4,_and_Papain-like_cysteine_peptidase_superfamily


id: CL:4862
description: Mixed, incl. Thiolester hydrolase activity, and Sodium:neurotransmitter symporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4862_Mixed,_incl._Thiolester_hydrolase_activity,_and_Sodium:neurotransmitter_symporter


id: CL:4873
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4873_Mixed,_incl._Metal-dependent_hydrolase_HDOD,_and_Peptidase_S9,_prolyl_oligopeptidase,_catalytic_domain

description:
  Mixed, incl. Metal-dependent hydrolase HDOD, and Peptidase S9, prolyl oligopeptidase, catalytic domain


id: CL:4882
description: Mostly uncharacterized, incl. Zinc-finger, and Ribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4882_Mostly_uncharacterized,_incl._Zinc-finger,_and_Ribonuclease_activity


id: CL:4883
description: Mostly uncharacterized, incl. Zinc-finger, and Cell aggregation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4883_Mostly_uncharacterized,_incl._Zinc-finger,_and_Cell_aggregation


id: CL:4885
description: Mixed, incl. Zinc-finger, and Large family of predicted nucleotide-binding domains
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4885_Mixed,_incl._Zinc-finger,_and_Large_family_of_predicted_nucleotide-binding_domains


id: CL:4887
description: Mixed, incl. Large family of predicted nucleotide-binding domains, and Chromatin remodeling
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4887_Mixed,_incl._Large_family_of_predicted_nucleotide-binding_domains,_and_Chromatin_remodeling


id: CL:491
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:491_DNA-directed_DNA_polymerase_activity,_and_DNA_helicase_DnaB,_N-terminal/DNA_primase_DnaG,_C-terminal

description:
  DNA-directed DNA polymerase activity, and DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal


id: CL:4914
description: Mixed, incl. Nucleotidyltransferase superfamily, and Alpha/beta knot methyltransferases
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4914_Mixed,_incl._Nucleotidyltransferase_superfamily,_and_Alpha/beta_knot_methyltransferases


id: CL:4923
description: Mixed, incl. DNA metabolic process, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4923_Mixed,_incl._DNA_metabolic_process,_and_Response_to_virus


id: CL:4924
description: Mixed, incl. Catalytic activity, acting on DNA, and Primosome complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4924_Mixed,_incl._Catalytic_activity,_acting_on_DNA,_and_Primosome_complex


id: CL:4925
description: Mixed, incl. DNA metabolic process, and ABC transporter transmembrane region
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4925_Mixed,_incl._DNA_metabolic_process,_and_ABC_transporter_transmembrane_region


id: CL:4926
description: Mixed, incl. DNA metabolic process, and ABC transporter transmembrane region
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4926_Mixed,_incl._DNA_metabolic_process,_and_ABC_transporter_transmembrane_region


id: CL:4927
description: Mixed, incl. DNA alkylation, and DNA strand exchange activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4927_Mixed,_incl._DNA_alkylation,_and_DNA_strand_exchange_activity


id: CL:4930
description: Mixed, incl. DNA strand exchange activity, and Primosome complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4930_Mixed,_incl._DNA_strand_exchange_activity,_and_Primosome_complex


id: CL:4931
description: Mixed, incl. DNA strand exchange activity, and Primosome complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4931_Mixed,_incl._DNA_strand_exchange_activity,_and_Primosome_complex


id: CL:4933
description: Mixed, incl. DNA strand exchange activity, and Primosome complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4933_Mixed,_incl._DNA_strand_exchange_activity,_and_Primosome_complex


id: CL:4935
description: Mixed, incl. Primosome complex, and DNA alkylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4935_Mixed,_incl._Primosome_complex,_and_DNA_alkylation


id: CL:4937
description: Mixed, incl. DNA restriction-modification system, and Primosome complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4937_Mixed,_incl._DNA_restriction-modification_system,_and_Primosome_complex


id: CL:4938
description: Mixed, incl. Primosome complex, and Type IV secretion system protein TraG/VirD4
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4938_Mixed,_incl._Primosome_complex,_and_Type_IV_secretion_system_protein_TraG/VirD4


id: CL:494
description: DNA polymerase complex, and Helix-hairpin-helix motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:494_DNA_polymerase_complex,_and_Helix-hairpin-helix_motif


id: CL:4940
description: Mixed, incl. Type IV secretion system protein TraG/VirD4, and Single-strand binding protein family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4940_Mixed,_incl._Type_IV_secretion_system_protein_TraG/VirD4,_and_Single-strand_binding_protein_family


id: CL:4957
description: Mixed, incl. DNA methylase, and Helicase HerA, central domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4957_Mixed,_incl._DNA_methylase,_and_Helicase_HerA,_central_domain


id: CL:4983
description: MobA/MobL protein, and Domain of unknown function DUF4368
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:4983_MobA/MobL_protein,_and_Domain_of_unknown_function_DUF4368


id: CL:5002
description: Mixed, incl. Putative heavy-metal chelation, and ABC transporter transmembrane region
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5002_Mixed,_incl._Putative_heavy-metal_chelation,_and_ABC_transporter_transmembrane_region


id: CL:5020
description: DNA methylase, adenine-specific, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5020_DNA_methylase,_adenine-specific,_and_AAA_domain


id: CL:5032
description: Mixed, incl. YhcG, N-terminal, and YhcG PDDEXK nuclease domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5032_Mixed,_incl._YhcG,_N-terminal,_and_YhcG_PDDEXK_nuclease_domain


id: CL:5047
description: Mixed, incl. NTF2-like domain superfamily, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5047_Mixed,_incl._NTF2-like_domain_superfamily,_and_4Fe-4S_binding_domain


id: CL:5049
description: Mixed, incl. 4Fe-4S binding domain, and AhpC/TSA family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5049_Mixed,_incl._4Fe-4S_binding_domain,_and_AhpC/TSA_family


id: CL:5071
description: Double-strand break repair, and UvrD-like helicase C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5071_Double-strand_break_repair,_and_UvrD-like_helicase_C-terminal_domain


id: CL:5085
description: Mixed, incl. Response to virus, and ParB/Sulfiredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5085_Mixed,_incl._Response_to_virus,_and_ParB/Sulfiredoxin


id: CL:5088
description: Response to virus, and Toxin-antitoxin system, RelE/ParE toxin family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5088_Response_to_virus,_and_Toxin-antitoxin_system,_RelE/ParE_toxin_family


id: CL:512
description: Mixed, incl. DNA topoisomerase, type IIA-like domain superfamily, and tRNA processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:512_Mixed,_incl._DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_tRNA_processing


id: CL:5120
description: ParB/Sulfiredoxin, and Response to oxygen levels
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5120_ParB/Sulfiredoxin,_and_Response_to_oxygen_levels


id: CL:5122
description: ParB-like nuclease domain, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5122_ParB-like_nuclease_domain,_and_AAA_domain


id: CL:514
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:514_Mixed,_incl._DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_Sequence-specific_double-stranded_DNA_binding

description:
  Mixed, incl. DNA topoisomerase, type IIA-like domain superfamily, and Sequence-specific double-stranded DNA binding


id: CL:5150
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5150_Mixed,_incl._Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond,_and_Glycine_reductase_complex_selenoprotein_A

description:
  Mixed, incl. Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, and Glycine reductase complex selenoprotein A


id: CL:5151
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5151_Mixed,_incl._Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond,_and_Glycine_reductase_complex_selenoprotein_A

description:
  Mixed, incl. Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, and Glycine reductase complex selenoprotein A


id: CL:5152
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5152_Mixed,_incl._Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond,_and_Glycine_reductase_complex_selenoprotein_A

description:
  Mixed, incl. Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, and Glycine reductase complex selenoprotein A


id: CL:5153
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5153_Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond,_and_Glycine_reductase_complex_selenoprotein_A

description:
  Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, and Glycine reductase complex selenoprotein A


id: CL:5155
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5155_Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond,_and_Glycine_reductase_complex_selenoprotein_A

description:
  Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, and Glycine reductase complex selenoprotein A


id: CL:5157
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5157_Glycine_reductase_complex_selenoprotein_A,_and_Selenoprotein_B,_glycine/betaine/sarcosine/D-proline_reductase_family

description:
  Glycine reductase complex selenoprotein A, and Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family


id: CL:5173
description: Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5173_Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond


id: CL:5192
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5192_Mixed,_incl._Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond,_and_Response_to_host

description:
  Mixed, incl. Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, and Response to host


id: CL:5195
description: Mixed, incl. Phenazine biosynthesis-like protein, and SAF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5195_Mixed,_incl._Phenazine_biosynthesis-like_protein,_and_SAF_domain


id: CL:5212
description: Mixed, incl. ComA-like, MBL domain, and Molybdenum ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5212_Mixed,_incl._ComA-like,_MBL_domain,_and_Molybdenum_ion_binding


id: CL:5222
description: Mixed, incl. Putative adhesin, and LSM domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5222_Mixed,_incl._Putative_adhesin,_and_LSM_domain_superfamily


id: CL:5223
description: Mixed, incl. LSM domain superfamily, and Putative Se/S carrier protein-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5223_Mixed,_incl._LSM_domain_superfamily,_and_Putative_Se/S_carrier_protein-like


id: CL:5232
description: Mixed, incl. Putative adhesin, and Transcription regulator HTH, GntR
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5232_Mixed,_incl._Putative_adhesin,_and_Transcription_regulator_HTH,_GntR


id: CL:5242
description: Mixed, incl. RmlC-like cupin domain superfamily, and Metalloprotease
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5242_Mixed,_incl._RmlC-like_cupin_domain_superfamily,_and_Metalloprotease


id: CL:5259
description: Mixed, incl. Quorum sensing, and ABC transporter-like, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5259_Mixed,_incl._Quorum_sensing,_and_ABC_transporter-like,_ATP-binding_domain


id: CL:5260
description: Mixed, incl. Quorum sensing, and Potassium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5260_Mixed,_incl._Quorum_sensing,_and_Potassium_ion_transport


id: CL:5262
description: Quorum sensing, and Potassium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5262_Quorum_sensing,_and_Potassium_ion_transport


id: CL:5263
description: Quorum sensing, and Transcription regulator HTH, GntR
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5263_Quorum_sensing,_and_Transcription_regulator_HTH,_GntR


id: CL:5268
description: Nickel cation transmembrane transporter activity, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5268_Nickel_cation_transmembrane_transporter_activity,_and_Peptide_transport


id: CL:5269
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5269_Nickel_cation_transmembrane_transporter_activity,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
  Nickel cation transmembrane transporter activity, and Oligopeptide/dipeptide ABC transporter, C-terminal


id: CL:527
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:527_Mixed,_incl._Glucose_inhibited_division_protein_A,_and_GTP-binding_protein_TrmE/Aminomethyltransferase_GcvT,_domain_1

description:
  Mixed, incl. Glucose inhibited division protein A, and GTP-binding protein TrmE/Aminomethyltransferase GcvT, domain 1


id: CL:5270
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5270_Nickel_cation_transmembrane_transporter_activity,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
  Nickel cation transmembrane transporter activity, and Oligopeptide/dipeptide ABC transporter, C-terminal


id: CL:5271
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5271_Nickel_cation_transmembrane_transporter_activity,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
  Nickel cation transmembrane transporter activity, and Oligopeptide/dipeptide ABC transporter, C-terminal


id: CL:5272
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5272_Oligopeptide/dipeptide_ABC_transporter,_C-terminal,_and_Nickel_cation_transmembrane_transporter_activity

description:
  Oligopeptide/dipeptide ABC transporter, C-terminal, and Nickel cation transmembrane transporter activity


id: CL:5273
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5273_Oligopeptide/dipeptide_ABC_transporter,_C-terminal,_and_Oligopeptide_transport_permease_C-like,_N-terminal_domain

description:
  Oligopeptide/dipeptide ABC transporter, C-terminal, and Oligopeptide transport permease C-like, N-terminal domain


id: CL:5274
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5274_Oligopeptide/dipeptide_transporter,_C-terminal_region,_and_Oligopeptide_transport_permease_C-like,_N-terminal_domain

description:
  Oligopeptide/dipeptide transporter, C-terminal region, and Oligopeptide transport permease C-like, N-terminal domain


id: CL:5283
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5283_Solute-binding_protein_family_5,_conserved_site,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
  Solute-binding protein family 5, conserved site, and Oligopeptide/dipeptide ABC transporter, C-terminal


id: CL:5292
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5292_Solute-binding_protein_family_5,_conserved_site,_and_Oligopeptide/dipeptide_ABC_transporter,_C-terminal

description:
  Solute-binding protein family 5, conserved site, and Oligopeptide/dipeptide ABC transporter, C-terminal


id: CL:5302
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5302_Solute-binding_protein_family_5,_conserved_site,_and_Oligopeptide/dipeptide_transporter,_C-terminal_region

description:
  Solute-binding protein family 5, conserved site, and Oligopeptide/dipeptide transporter, C-terminal region


id: CL:5316
description: Nickel cation transmembrane transporter activity, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5316_Nickel_cation_transmembrane_transporter_activity,_and_Peptide_transport


id: CL:5317
description: Nickel cation transmembrane transporter activity, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5317_Nickel_cation_transmembrane_transporter_activity,_and_Peptide_transport


id: CL:5319
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5319_Oligopeptide/dipeptide_transporter,_C-terminal_region,_and_Oligopeptide_transport_permease_C-like,_N-terminal_domain

description:
  Oligopeptide/dipeptide transporter, C-terminal region, and Oligopeptide transport permease C-like, N-terminal domain


id: CL:5335
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5335_Oligopeptide/dipeptide_ABC_transporter,_C-terminal,_and_Oligopeptide_transport_permease_C-like,_N-terminal_domain

description:
  Oligopeptide/dipeptide ABC transporter, C-terminal, and Oligopeptide transport permease C-like, N-terminal domain


id: CL:5345
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5345_Oligopeptide/dipeptide_ABC_transporter,_C-terminal,_and_Oligopeptide_transport_permease_C-like,_N-terminal_domain

description:
  Oligopeptide/dipeptide ABC transporter, C-terminal, and Oligopeptide transport permease C-like, N-terminal domain


id: CL:5355
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5355_Oligopeptide/dipeptide_transporter,_C-terminal_region,_and_ABC_transporter_type_1,_GsiC-like,_N-terminal_domain

description:
  Oligopeptide/dipeptide transporter, C-terminal region, and ABC transporter type 1, GsiC-like, N-terminal domain


id: CL:5364
description: Nickel cation transmembrane transporter activity, and Peptide/nickel binding protein, MppA-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5364_Nickel_cation_transmembrane_transporter_activity,_and_Peptide/nickel_binding_protein,_MppA-type


id: CL:5365
description: Nickel cation transmembrane transporter activity, and Peptide/nickel binding protein, MppA-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5365_Nickel_cation_transmembrane_transporter_activity,_and_Peptide/nickel_binding_protein,_MppA-type


id: CL:537
description: Mismatched DNA binding, and LSM domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:537_Mismatched_DNA_binding,_and_LSM_domain_superfamily


id: CL:5374
description: Nickel cation transmembrane transporter activity, and Peptide/nickel binding protein, MppA-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5374_Nickel_cation_transmembrane_transporter_activity,_and_Peptide/nickel_binding_protein,_MppA-type


id: CL:5384
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5384_Oligopeptide/dipeptide_transporter,_C-terminal_region,_and_Peptide_transmembrane_transporter_activity

description:
  Oligopeptide/dipeptide transporter, C-terminal region, and Peptide transmembrane transporter activity


id: CL:5397
description: Mixed, incl. MGS-like domain, and dephospho-CoA kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5397_Mixed,_incl._MGS-like_domain,_and_dephospho-CoA_kinase_activity


id: CL:5406
description: Mixed, incl. Aminoacyltransferase activity, and ABC transporter-like, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5406_Mixed,_incl._Aminoacyltransferase_activity,_and_ABC_transporter-like,_ATP-binding_domain


id: CL:5415
description: Mixed, incl. Amino acid transport, and ABC transporters
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5415_Mixed,_incl._Amino_acid_transport,_and_ABC_transporters


id: CL:5416
description: ABC transporters, and Iron-sulfur cluster-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5416_ABC_transporters,_and_Iron-sulfur_cluster-binding_domain


id: CL:5417
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5417_Mostly_uncharacterized,_incl._ABC-2_family_transporter_protein,_and_Iron-sulfur_cluster-binding_domain

description:
  Mostly uncharacterized, incl. ABC-2 family transporter protein, and Iron-sulfur cluster-binding domain


id: CL:5418
description: Mixed, incl. Iron-sulfur cluster-binding domain, and Transcription regulator HTH, GntR
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5418_Mixed,_incl._Iron-sulfur_cluster-binding_domain,_and_Transcription_regulator_HTH,_GntR


id: CL:5419
description: Mixed, incl. Transcription regulator HTH, GntR, and RNA-directed DNA polymerase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5419_Mixed,_incl._Transcription_regulator_HTH,_GntR,_and_RNA-directed_DNA_polymerase_activity


id: CL:5421
description: Transcription regulator HTH, GntR, and ABC transporters
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5421_Transcription_regulator_HTH,_GntR,_and_ABC_transporters


id: CL:5439
description: Mixed, incl. Iron-sulfur cluster-binding domain, and Tricarboxylic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5439_Mixed,_incl._Iron-sulfur_cluster-binding_domain,_and_Tricarboxylic_acid_metabolic_process


id: CL:5454
description: ABC-2 family transporter protein, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5454_ABC-2_family_transporter_protein,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:5464
description: Mixed, incl. Branched-chain amino acid transport, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5464_Mixed,_incl._Branched-chain_amino_acid_transport,_and_Leucine-binding_protein_domain


id: CL:5466
description: Mixed, incl. Branched-chain amino acid transport, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5466_Mixed,_incl._Branched-chain_amino_acid_transport,_and_Leucine-binding_protein_domain


id: CL:5467
description: Mixed, incl. Leu/Ile/Val-binding protein, and Branched-chain amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5467_Mixed,_incl._Leu/Ile/Val-binding_protein,_and_Branched-chain_amino_acid_transport


id: CL:5468
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5468_Mixed,_incl._Leu/Ile/Val-binding_protein,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter

description:
  Mixed, incl. Leu/Ile/Val-binding protein, and Branched-chain amino acid ATP-binding cassette transporter


id: CL:5477
description: Branched-chain amino acid transport, and Leu/Ile/Val-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5477_Branched-chain_amino_acid_transport,_and_Leu/Ile/Val-binding_protein


id: CL:5486
description: Branched-chain amino acid transport, and Branched-chain amino acid ATP-binding cassette transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5486_Branched-chain_amino_acid_transport,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter


id: CL:5503
description: Mixed, incl. ABC-2 membrane transporter-like, and Protein of unknown function DUF3100
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5503_Mixed,_incl._ABC-2_membrane_transporter-like,_and_Protein_of_unknown_function_DUF3100


id: CL:5517
description: Potassium ion transport, and Transcription regulator HTH, GntR
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5517_Potassium_ion_transport,_and_Transcription_regulator_HTH,_GntR


id: CL:552
description: Chromate transport, and Peptidyl-glutamine methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:552_Chromate_transport,_and_Peptidyl-glutamine_methylation


id: CL:5542
description: Mixed, incl. Nucleoside recognition, and Beta-lactamase, class-A
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5542_Mixed,_incl._Nucleoside_recognition,_and_Beta-lactamase,_class-A


id: CL:5544
description: Mixed, incl. Beta-lactamase, class-A, and Carbon fixation pathways in prokaryotes
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5544_Mixed,_incl._Beta-lactamase,_class-A,_and_Carbon_fixation_pathways_in_prokaryotes


id: CL:5571
description: Mostly uncharacterized, incl. ABC transporter transmembrane region
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5571_Mostly_uncharacterized,_incl._ABC_transporter_transmembrane_region


id: CL:5589
description: Mixed, incl. PAS domain superfamily, and MgtC family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5589_Mixed,_incl._PAS_domain_superfamily,_and_MgtC_family


id: CL:5592
description: PAS fold, and Sequence-specific double-stranded DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5592_PAS_fold,_and_Sequence-specific_double-stranded_DNA_binding


id: CL:5612
description: Mixed, incl. Tricarboxylic acid metabolic process, and Other glycan degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5612_Mixed,_incl._Tricarboxylic_acid_metabolic_process,_and_Other_glycan_degradation


id: CL:5626
description: Mostly uncharacterized, incl. Peptidase M29, and Domain of unknown function DUF4183
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5626_Mostly_uncharacterized,_incl._Peptidase_M29,_and_Domain_of_unknown_function_DUF4183


id: CL:5627
description: Mixed, incl. Peptidase M29, and Domain of unknown function DUF4183
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5627_Mixed,_incl._Peptidase_M29,_and_Domain_of_unknown_function_DUF4183


id: CL:5638
description: Mixed, incl. Hemerythrin-like, and GIY-YIG endonuclease superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5638_Mixed,_incl._Hemerythrin-like,_and_GIY-YIG_endonuclease_superfamily


id: CL:564
description: Mixed, incl. TatD related DNase, and tRNA synthetases class I (W and Y)
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:564_Mixed,_incl._TatD_related_DNase,_and_tRNA_synthetases_class_I_(W_and_Y)


id: CL:5650
description: Mixed, incl. ABC transporter, permease, and ABC transporter substrate-binding protein PnrA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5650_Mixed,_incl._ABC_transporter,_permease,_and_ABC_transporter_substrate-binding_protein_PnrA-like


id: CL:5651
description: Mixed, incl. ABC transporter, permease, and ABC transporter substrate-binding protein PnrA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5651_Mixed,_incl._ABC_transporter,_permease,_and_ABC_transporter_substrate-binding_protein_PnrA-like


id: CL:5653
description: ABC transporter, permease, and ABC transporter substrate-binding protein PnrA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5653_ABC_transporter,_permease,_and_ABC_transporter_substrate-binding_protein_PnrA-like


id: CL:5655
description: Sugar transport, and ABC transporter substrate-binding protein PnrA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5655_Sugar_transport,_and_ABC_transporter_substrate-binding_protein_PnrA-like


id: CL:5657
description: Sugar transport, and ABC transporter substrate-binding protein PnrA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5657_Sugar_transport,_and_ABC_transporter_substrate-binding_protein_PnrA-like


id: CL:5705
description: Mixed, incl. Radical SAM superfamily, and DUF218 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5705_Mixed,_incl._Radical_SAM_superfamily,_and_DUF218_domain


id: CL:5719
description: Mostly uncharacterized, incl. ADP binding, and PEP-utilising enzyme, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5719_Mostly_uncharacterized,_incl._ADP_binding,_and_PEP-utilising_enzyme,_C-terminal


id: CL:5721
description: Mixed, incl. Endodeoxyribonuclease activity, producing 5-phosphomonoesters, and DNA methylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5721_Mixed,_incl._Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters,_and_DNA_methylase


id: CL:5749
description: Mostly uncharacterized, incl. YibE/F-like, and Zinc/iron permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5749_Mostly_uncharacterized,_incl._YibE/F-like,_and_Zinc/iron_permease


id: CL:5750
description: Mixed, incl. YibE/F-like, and Zinc/iron permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5750_Mixed,_incl._YibE/F-like,_and_Zinc/iron_permease


id: CL:5752
description: Mixed, incl. YibE/F-like, and Alkaline-phosphatase-like, core domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5752_Mixed,_incl._YibE/F-like,_and_Alkaline-phosphatase-like,_core_domain_superfamily


id: CL:576
description: Mixed, incl. Ribonuclease III family, and RNA methyltransferase TrmH family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:576_Mixed,_incl._Ribonuclease_III_family,_and_RNA_methyltransferase_TrmH_family


id: CL:5766
description: Mixed, incl. Zinc/iron permease, and YibE/F-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5766_Mixed,_incl._Zinc/iron_permease,_and_YibE/F-like


id: CL:5790
description: Mixed, incl. Helix-turn-helix XRE-family like proteins, and Phage holin, LL-H family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5790_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Phage_holin,_LL-H_family


id: CL:5791
description: Mixed, incl. Helix-turn-helix XRE-family like proteins, and IrrE N-terminal-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5791_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_IrrE_N-terminal-like_domain


id: CL:5793
description: Mixed, incl. Helix-turn-helix XRE-family like proteins, and IrrE N-terminal-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5793_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_IrrE_N-terminal-like_domain


id: CL:5795
description: Helix-turn-helix XRE-family like proteins, and Phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5795_Helix-turn-helix_XRE-family_like_proteins,_and_Phosphorylation


id: CL:5830
description: Mixed, incl. Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5830_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins


id: CL:5840
description: Mixed, incl. Phage holin, LL-H family, and Haemolysin XhlA
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5840_Mixed,_incl._Phage_holin,_LL-H_family,_and_Haemolysin_XhlA


id: CL:5842
description: Mixed, incl. Phage holin, LL-H family, and Haemolysin XhlA
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5842_Mixed,_incl._Phage_holin,_LL-H_family,_and_Haemolysin_XhlA


id: CL:5854
description: Mixed, incl. Phage holin, LL-H family, and Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5854_Mixed,_incl._Phage_holin,_LL-H_family,_and_Mannosyl-glycoprotein_endo-beta-N-acetylglucosaminidase


id: CL:5865
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5865_Mostly_uncharacterized,_incl._Transcriptional_regulator_TetR,_C-terminal,_Firmicutes_type,_and_FAD_binding

description:
  Mostly uncharacterized, incl. Transcriptional regulator TetR, C-terminal, Firmicutes type, and FAD binding


id: CL:5866
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5866_Mostly_uncharacterized,_incl._D-Glutamine_and_D-glutamate_metabolism,_and_DNA_replication,_synthesis_of_RNA_primer

description:
  Mostly uncharacterized, incl. D-Glutamine and D-glutamate metabolism, and DNA replication, synthesis of RNA primer


id: CL:5867
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5867_Mostly_uncharacterized,_incl._DNA_replication,_synthesis_of_RNA_primer,_and_Double-stranded_DNA_binding

description:
  Mostly uncharacterized, incl. DNA replication, synthesis of RNA primer, and Double-stranded DNA binding


id: CL:5870
description: Mixed, incl. Double-stranded DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5870_Mixed,_incl._Double-stranded_DNA_binding


id: CL:589
description: Mixed, incl. Riboflavin metabolic process, and Pteridine-containing compound biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:589_Mixed,_incl._Riboflavin_metabolic_process,_and_Pteridine-containing_compound_biosynthetic_process


id: CL:5892
description: Mixed, incl. D-Glutamine and D-glutamate metabolism, and tRNA endonuclease-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5892_Mixed,_incl._D-Glutamine_and_D-glutamate_metabolism,_and_tRNA_endonuclease-like_domain_superfamily


id: CL:5909
description: Mixed, incl. Transcriptional regulator TetR, C-terminal, Firmicutes type, and FAD binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5909_Mixed,_incl._Transcriptional_regulator_TetR,_C-terminal,_Firmicutes_type,_and_FAD_binding


id: CL:591
description: Mixed, incl. Riboflavin metabolic process, and Pteridine-containing compound biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:591_Mixed,_incl._Riboflavin_metabolic_process,_and_Pteridine-containing_compound_biosynthetic_process


id: CL:5924
description: Mixed, incl. Transposition, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5924_Mixed,_incl._Transposition,_and_DNA_integration


id: CL:5926
description: Transposition, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5926_Transposition,_and_DNA_integration


id: CL:5927
description: Mixed, incl. Integrase, catalytic core, and Transposition
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5927_Mixed,_incl._Integrase,_catalytic_core,_and_Transposition


id: CL:5928
description: Mixed, incl. Integrase, catalytic core, and Transposase IS3/IS911family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5928_Mixed,_incl._Integrase,_catalytic_core,_and_Transposase_IS3/IS911family


id: CL:5929
description: Integrase, catalytic core, and Transposase IS3/IS911family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5929_Integrase,_catalytic_core,_and_Transposase_IS3/IS911family


id: CL:593
description: Riboflavin metabolic process, and Tetrahydrofolate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:593_Riboflavin_metabolic_process,_and_Tetrahydrofolate_biosynthetic_process


id: CL:5931
description: DDE transposase sub-family, and Transposase IS3/IS911family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5931_DDE_transposase_sub-family,_and_Transposase_IS3/IS911family


id: CL:5949
description: Mixed, incl. IstB-like ATP-binding protein, and RNA-directed DNA polymerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5949_Mixed,_incl._IstB-like_ATP-binding_protein,_and_RNA-directed_DNA_polymerase


id: CL:5974
description: Transposition, DNA-mediated, and DDE transposase retroviral integrase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5974_Transposition,_DNA-mediated,_and_DDE_transposase_retroviral_integrase_sub-family


id: CL:5978
description: DDE transposase retroviral integrase sub-family, and Trp repressor/replication initiator
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:5978_DDE_transposase_retroviral_integrase_sub-family,_and_Trp_repressor/replication_initiator


id: CL:6031
description: Mixed, incl. Alanine transport, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:6031_Mixed,_incl._Alanine_transport,_and_Nitrogen_metabolism


id: CL:6043
description: Mostly uncharacterized, incl. DNA methylation on adenine, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:6043_Mostly_uncharacterized,_incl._DNA_methylation_on_adenine,_and_Transposase_activity


id: CL:6044
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:6044_Mostly_uncharacterized,_incl._Crossover_junction_endodeoxyribonuclease_activity,_and_Adenine_modification_methylase,_M.EcoRV-type

description:
  Mostly uncharacterized, incl. Crossover junction endodeoxyribonuclease activity, and Adenine modification methylase, M.EcoRV-type


id: CL:6045
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:6045_Mostly_uncharacterized,_incl._Crossover_junction_endodeoxyribonuclease_activity,_and_Adenine_modification_methylase,_M.EcoRV-type

description:
  Mostly uncharacterized, incl. Crossover junction endodeoxyribonuclease activity, and Adenine modification methylase, M.EcoRV-type


id: CL:6046
description: Mixed, incl. Crossover junction endodeoxyribonuclease activity, and Transposase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:6046_Mixed,_incl._Crossover_junction_endodeoxyribonuclease_activity,_and_Transposase_activity


id: CL:605
description: Tetrahydrofolate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:605_Tetrahydrofolate_biosynthetic_process


id: CL:6057
description: Mixed, incl. Adenine modification methylase, M.EcoRV-type, and Sigma factor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:6057_Mixed,_incl._Adenine_modification_methylase,_M.EcoRV-type,_and_Sigma_factor_activity


id: CL:6081
description: Mixed, incl. DNA methylation on adenine, and Response to host
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:6081_Mixed,_incl._DNA_methylation_on_adenine,_and_Response_to_host


id: CL:6083
description: Mixed, incl. DNA methylation on adenine
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:6083_Mixed,_incl._DNA_methylation_on_adenine


id: CL:6098
description: Mixed, incl. Response to host, and Domain of unknown function DUF4367
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:6098_Mixed,_incl._Response_to_host,_and_Domain_of_unknown_function_DUF4367


id: CL:6108
description: Mixed, incl. Peptidase C39-like, and Carbohydrate binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:6108_Mixed,_incl._Peptidase_C39-like,_and_Carbohydrate_binding


id: CL:631
description: Mixed, incl. Protein serine/threonine phosphatase activity, and rRNA methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:631_Mixed,_incl._Protein_serine/threonine_phosphatase_activity,_and_rRNA_methyltransferase_activity


id: CL:633
description: Mixed, incl. PASTA domain, and RsgA GTPase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:633_Mixed,_incl._PASTA_domain,_and_RsgA_GTPase_domain


id: CL:647
description: Mixed, incl. GDP metabolic process, and Exoribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:647_Mixed,_incl._GDP_metabolic_process,_and_Exoribonuclease_activity


id: CL:658
description: Mostly uncharacterized, incl. glycyl-tRNA aminoacylation, and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:658_Mostly_uncharacterized,_incl._glycyl-tRNA_aminoacylation,_and_Ribosome_biogenesis


id: CL:659
description: Mixed, incl. glycyl-tRNA aminoacylation, and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:659_Mixed,_incl._glycyl-tRNA_aminoacylation,_and_Ribosome_biogenesis


id: CL:661
description: Mixed, incl. AAA domain, and UTP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:661_Mixed,_incl._AAA_domain,_and_UTP_metabolic_process


id: CL:686
description: Mixed, incl. PUA-like superfamily, and Serine dehydrogenase proteinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:686_Mixed,_incl._PUA-like_superfamily,_and_Serine_dehydrogenase_proteinase


id: CL:702
description: Phospholipid metabolism, and PDZ domain 6
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:702_Phospholipid_metabolism,_and_PDZ_domain_6


id: CL:712
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:712_Mixed,_incl._Nucleobase-containing_small_molecule_metabolic_process,_and_NUDIX_hydrolase,_conserved_site

description:
  Mixed, incl. Nucleobase-containing small molecule metabolic process, and NUDIX hydrolase, conserved site


id: CL:713
description: Mixed, incl. Pyrimidine metabolism, and Purine nucleotide salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:713_Mixed,_incl._Pyrimidine_metabolism,_and_Purine_nucleotide_salvage


id: CL:715
description: Mixed, incl. Nucleoside metabolic process, and Pyrimidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:715_Mixed,_incl._Nucleoside_metabolic_process,_and_Pyrimidine_metabolism


id: CL:717
description: Mixed, incl. Nucleoside metabolic process, and CBS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:717_Mixed,_incl._Nucleoside_metabolic_process,_and_CBS_domain


id: CL:718
description: Nucleoside metabolic process, and Nucleotide catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:718_Nucleoside_metabolic_process,_and_Nucleotide_catabolic_process


id: CL:719
description: Purine nucleotide salvage, and Purine nucleoside phosphorylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:719_Purine_nucleotide_salvage,_and_Purine_nucleoside_phosphorylase


id: CL:72
description: Mixed, incl. Translation, and ATP-dependent activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:72_Mixed,_incl._Translation,_and_ATP-dependent_activity


id: CL:721
description: Purine nucleoside phosphorylase, and Purine salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:721_Purine_nucleoside_phosphorylase,_and_Purine_salvage


id: CL:73
description: Mixed, incl. Translation, and Protein export
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:73_Mixed,_incl._Translation,_and_Protein_export


id: CL:741
description: Pyrimidine nucleoside metabolic process, and UMP salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:741_Pyrimidine_nucleoside_metabolic_process,_and_UMP_salvage


id: CL:75
description: Mixed, incl. Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:75_Mixed,_incl._Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:761
description: CBS domain, and Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:761_CBS_domain,_and_Motif_C-terminal_to_PAS_motifs_(likely_to_contribute_to_PAS_structural_domain)


id: CL:77
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:77_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:780
description: Deoxyribonucleotide biosynthetic process, and DNA synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:780_Deoxyribonucleotide_biosynthetic_process,_and_DNA_synthesis


id: CL:79
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:79_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:80
description: Mixed, incl. Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:80_Mixed,_incl._Ribosome,_and_Regulation_of_translation


id: CL:800
description: Mixed, incl. TPR repeat, and Alanyl-tRNA synthetase, class IIc, core domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:800_Mixed,_incl._TPR_repeat,_and_Alanyl-tRNA_synthetase,_class_IIc,_core_domain


id: CL:801
description: Mixed, incl. Spore wall, and Serine aminopeptidase, S33
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:801_Mixed,_incl._Spore_wall,_and_Serine_aminopeptidase,_S33


id: CL:81
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:81_Ribosome,_and_Regulation_of_translation


id: CL:812
description: TPR repeat, and Alanyl-tRNA synthetase, class IIc, core domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:812_TPR_repeat,_and_Alanyl-tRNA_synthetase,_class_IIc,_core_domain


id: CL:828
description: Mixed, incl. NUDIX hydrolase, conserved site, and Nitrogen utilization
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:828_Mixed,_incl._NUDIX_hydrolase,_conserved_site,_and_Nitrogen_utilization


id: CL:830
description: NUDIX hydrolase, conserved site, and Nicotinamide nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:830_NUDIX_hydrolase,_conserved_site,_and_Nicotinamide_nucleotide_biosynthetic_process


id: CL:833
description: Nicotinamide nucleotide metabolic process, and Deacetylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:833_Nicotinamide_nucleotide_metabolic_process,_and_Deacetylase_activity


id: CL:854
description: Nitrogen utilization, and Peptidase M29
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:854_Nitrogen_utilization,_and_Peptidase_M29


id: CL:863
description: Mixed, incl. Nitrogen fixation, and DNA recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:863_Mixed,_incl._Nitrogen_fixation,_and_DNA_recombination


id: CL:864
description: Mixed, incl. DNA recombination, and Queuosine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:864_Mixed,_incl._DNA_recombination,_and_Queuosine_biosynthesis


id: CL:865
description: Mixed, incl. Queuosine biosynthesis, and Holliday junction helicase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:865_Mixed,_incl._Queuosine_biosynthesis,_and_Holliday_junction_helicase_complex


id: CL:867
description: Queuosine biosynthesis, and Holliday junction helicase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:867_Queuosine_biosynthesis,_and_Holliday_junction_helicase_complex


id: CL:87
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:87_Ribosome,_and_Regulation_of_translation


id: CL:886
description: Mixed, incl. RelA/SpoT, and Gas transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:886_Mixed,_incl._RelA/SpoT,_and_Gas_transport


id: CL:89
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:89_Ribosome,_and_Regulation_of_translation


id: CL:902
description: Nitrogen fixation, and Sulfatase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:902_Nitrogen_fixation,_and_Sulfatase,_N-terminal


id: CL:914
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Bacterial nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:914_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Bacterial_nucleoid


id: CL:916
description: tRNA threonylcarbamoyladenosine modification, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:916_tRNA_threonylcarbamoyladenosine_modification,_and_Acetyltransferase_(GNAT)_domain


id: CL:928
description: Bacterial nucleoid, and TatD related DNase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:928_Bacterial_nucleoid,_and_TatD_related_DNase


id: CL:941
description: Mixed, incl. Microbial metabolism in diverse environments, and Oxidoreductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:941_Mixed,_incl._Microbial_metabolism_in_diverse_environments,_and_Oxidoreductase_activity


id: CL:942
description: Mixed, incl. Microbial metabolism in diverse environments, and Fatty acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:942_Mixed,_incl._Microbial_metabolism_in_diverse_environments,_and_Fatty_acid_metabolism


id: CL:943
description: Mixed, incl. Oxidoreductase activity, and Butanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:943_Mixed,_incl._Oxidoreductase_activity,_and_Butanoate_metabolism


id: CL:944
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:944_Mixed,_incl._4Fe-4S_ferredoxin,_iron-sulphur_binding,_conserved_site,_and_FAD/NAD(P)-binding_domain_superfamily

description:
  Mixed, incl. 4Fe-4S ferredoxin, iron-sulphur binding, conserved site, and FAD/NAD(P)-binding domain superfamily


id: CL:945
description: Mixed, incl. 4Fe-4S ferredoxin, iron-sulphur binding, conserved site, and FMN-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:945_Mixed,_incl._4Fe-4S_ferredoxin,_iron-sulphur_binding,_conserved_site,_and_FMN-binding


id: CL:946
description: Mixed, incl. FMN-binding, and 4Fe-4S ferredoxin, iron-sulphur binding, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:946_Mixed,_incl._FMN-binding,_and_4Fe-4S_ferredoxin,_iron-sulphur_binding,_conserved_site


id: CL:948
description: 4Fe-4S binding domain, and Pyruvate ferredoxin/flavodoxin oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:948_4Fe-4S_binding_domain,_and_Pyruvate_ferredoxin/flavodoxin_oxidoreductase


id: CL:950
description: NADH dehydrogenase activity, and Formate dehydrogenase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:950_NADH_dehydrogenase_activity,_and_Formate_dehydrogenase_complex


id: CL:96
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:96_Structural_constituent_of_ribosome


id: CL:976
description: Mixed, incl. FAD-dependent oxidoreductase 2, FAD binding domain, and Tricarboxylic acid cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:976_Mixed,_incl._FAD-dependent_oxidoreductase_2,_FAD_binding_domain,_and_Tricarboxylic_acid_cycle


id: CL:979
description: Tricarboxylic acid cycle, and FMN-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:979_Tricarboxylic_acid_cycle,_and_FMN-binding


id: CL:999
description: Mixed, incl. 4Fe-4S binding domain, and Nitrate assimilation
name:
  Local Network Cluster (STRING).STRING_v12.0_1123404_STRINGid_CL:999_Mixed,_incl._4Fe-4S_binding_domain,_and_Nitrate_assimilation


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 10
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000724
description: Double-strand break repair via homologous recombination
memo: https://amigo.geneontology.org/amigo/term/GO:0000724
golevel: 9
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0000724_Double-strand_break_repair_via_homologous_recombination


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0002926
description: tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation
memo: https://amigo.geneontology.org/amigo/term/GO:0002926
golevel: 13
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0002926_tRNA_wobble_base_5-methoxycarbonylmethyl-2-thiouridinylation


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003864
description: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003864
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0003864_3-methyl-2-oxobutanoate_hydroxymethyltransferase_activity


id: GO:0003882
description: CDP-diacylglycerol-serine O-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003882
golevel: 6
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0003882_CDP-diacylglycerol-serine_O-phosphatidyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 6
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0004015
description: adenosylmethionine-8-amino-7-oxononanoate transaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004015
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0004015_adenosylmethionine-8-amino-7-oxononanoate_transaminase_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
golevel: 6
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 6
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004616
description: Phosphogluconate dehydrogenase (decarboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004616
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0004616_Phosphogluconate_dehydrogenase_(decarboxylating)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0005315
description: Inorganic phosphate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005315
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0005315_Inorganic_phosphate_transmembrane_transporter_activity


id: GO:0005477
description: Pyruvate secondary active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005477
golevel: 7
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0005477_Pyruvate_secondary_active_transmembrane_transporter_activity


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 11
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0007157
description: Heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
memo: https://amigo.geneontology.org/amigo/term/GO:0007157
golevel: 5
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0007157_Heterophilic_cell-cell_adhesion_via_plasma_membrane_cell_adhesion_molecules


id: GO:0008028
description: Monocarboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008028
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0008028_Monocarboxylic_acid_transmembrane_transporter_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008686
description: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008686
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0008686_3,4-dihydroxy-2-butanone-4-phosphate_synthase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
golevel: 6
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008817
description: cob(I)yrinic acid a,c-diamide adenosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008817
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0008817_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008939
description: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008939
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0008939_Nicotinate-nucleotide-dimethylbenzimidazole_phosphoribosyltransferase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0008982
description: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008982
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0008982_protein-N(PI)-phosphohistidine-sugar_phosphotransferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 6
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 9
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009139
description: Pyrimidine nucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009139
golevel: 9
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0009139_Pyrimidine_nucleoside_diphosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 9
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009157
description: Deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009157
golevel: 9
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0009157_Deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 10
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 9
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 10
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009175
description: Pyrimidine ribonucleoside monophosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009175
golevel: 10
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0009175_Pyrimidine_ribonucleoside_monophosphate_catabolic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 9
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 10
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 9
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 10
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 10
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 9
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 10
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009210
description: Pyrimidine ribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009210
golevel: 10
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0009210_Pyrimidine_ribonucleoside_triphosphate_catabolic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 9
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 10
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 10
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 9
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 10
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009401
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system
memo: https://amigo.geneontology.org/amigo/term/GO:0009401
golevel: 8
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0009401_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 6
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 6
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 6
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0010604
description: Positive regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010604
golevel: 5
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0010604_Positive_regulation_of_macromolecule_metabolic_process


id: GO:0010605
description: Negative regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010605
golevel: 5
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0010605_Negative_regulation_of_macromolecule_metabolic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
golevel: 3
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015355
description: Secondary active monocarboxylate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015355
golevel: 6
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0015355_Secondary_active_monocarboxylate_transmembrane_transporter_activity


id: GO:0015415
description: ATPase-coupled phosphate ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015415
golevel: 7
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0015415_ATPase-coupled_phosphate_ion_transmembrane_transporter_activity


id: GO:0015451
description: Decarboxylation-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015451
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0015451_Decarboxylation-driven_active_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015658
description: Branched-chain amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015658
golevel: 6
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0015658_Branched-chain_amino_acid_transmembrane_transporter_activity


id: GO:0015975
description: Energy derivation by oxidation of reduced inorganic compounds
memo: https://amigo.geneontology.org/amigo/term/GO:0015975
golevel: 4
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0015975_Energy_derivation_by_oxidation_of_reduced_inorganic_compounds


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016625
memo: https://amigo.geneontology.org/amigo/term/GO:0016625
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016625_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_iron-sulfur_protein_as_acceptor

description:
  Oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016642
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016642
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016642_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_disulfide_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016657
description: Oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016657
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016657_Oxidoreductase_activity,_acting_on_NAD(P)H,_nitrogenous_group_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016702
memo: https://amigo.geneontology.org/amigo/term/GO:0016702
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016702_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen


id: GO:0016703
memo: https://amigo.geneontology.org/amigo/term/GO:0016703
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016703_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_one_atom_of_oxygen_(internal_monooxygenases_or_internal_mixed_function_oxidases)

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)


id: GO:0016705
memo: https://amigo.geneontology.org/amigo/term/GO:0016705
golevel: 3
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016705_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: GO:0016721
description: Oxidoreductase activity, acting on superoxide radicals as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016721
golevel: 3
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016721_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016730
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016730
golevel: 3
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016730_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: GO:0016732
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors, dinitrogen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016732
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016732_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_dinitrogen_as_acceptor


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016773
description: Phosphotransferase activity, alcohol group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016773
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016773_Phosphotransferase_activity,_alcohol_group_as_acceptor


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
golevel: 6
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016825
description: Hydrolase activity, acting on acid phosphorus-nitrogen bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016825
golevel: 3
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016825_Hydrolase_activity,_acting_on_acid_phosphorus-nitrogen_bonds


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016863
description: Intramolecular oxidoreductase activity, transposing C=C bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016863
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016863_Intramolecular_oxidoreductase_activity,_transposing_C=C_bonds


id: GO:0016867
description: Intramolecular transferase activity, transferring acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016867
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016867_Intramolecular_transferase_activity,_transferring_acyl_groups


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016869
description: Intramolecular transferase activity, transferring amino groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016869
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016869_Intramolecular_transferase_activity,_transferring_amino_groups


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016888
description: Endodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016888
golevel: 7
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016888_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016889
description: Endodeoxyribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016889
golevel: 7
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016889_Endodeoxyribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 7
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
golevel: 6
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016894
memo: https://amigo.geneontology.org/amigo/term/GO:0016894
golevel: 6
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016894_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_3-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 7
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016896
description: Exoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016896
golevel: 7
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016896_Exoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0018339
description: peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid
memo: https://amigo.geneontology.org/amigo/term/GO:0018339
golevel: 8
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0018339_peptidyl-L-beta-methylthioaspartic_acid_biosynthetic_process_from_peptidyl-aspartic_acid


id: GO:0019171
description: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019171
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0019171_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 5
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019279
description: L-methionine biosynthetic process from L-homoserine via cystathionine
memo: https://amigo.geneontology.org/amigo/term/GO:0019279
golevel: 13
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0019279_L-methionine_biosynthetic_process_from_L-homoserine_via_cystathionine


id: GO:0019281
description: L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
memo: https://amigo.geneontology.org/amigo/term/GO:0019281
golevel: 14
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0019281_L-methionine_biosynthetic_process_from_homoserine_via_O-succinyl-L-homoserine_and_cystathionine


id: GO:0019288
description: Isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019288
golevel: 8
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0019288_Isopentenyl_diphosphate_biosynthetic_process,_methylerythritol_4-phosphate_pathway


id: GO:0019556
description: Histidine catabolic process to glutamate and formamide
memo: https://amigo.geneontology.org/amigo/term/GO:0019556
golevel: 10
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0019556_Histidine_catabolic_process_to_glutamate_and_formamide


id: GO:0019829
description: ATPase-coupled cation transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019829
golevel: 6
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0019829_ATPase-coupled_cation_transmembrane_transporter_activity


id: GO:0030435
description: Sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0030435
golevel: 3
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0030435_Sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0031234
description: Extrinsic component of cytoplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031234
golevel: 6
name:
  GOCC.STRING_v12.0_1123404_STRINGid_GO:0031234_Extrinsic_component_of_cytoplasmic_side_of_plasma_membrane


id: GO:0031250
description: Anaerobic ribonucleoside-triphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031250
golevel: 4
name:
  GOCC.STRING_v12.0_1123404_STRINGid_GO:0031250_Anaerobic_ribonucleoside-triphosphate_reductase_complex


id: GO:0031554
description: Regulation of DNA-templated transcription, termination
memo: https://amigo.geneontology.org/amigo/term/GO:0031554
golevel: 11
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0031554_Regulation_of_DNA-templated_transcription,_termination


id: GO:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
golevel: 3
name:
  GOCC.STRING_v12.0_1123404_STRINGid_GO:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GO:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
golevel: 3
name:
  GOCC.STRING_v12.0_1123404_STRINGid_GO:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GO:0033283
description: ATPase-coupled organic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033283
golevel: 6
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0033283_ATPase-coupled_organic_acid_transmembrane_transporter_activity


id: GO:0033284
description: ATPase-coupled carboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033284
golevel: 7
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0033284_ATPase-coupled_carboxylic_acid_transmembrane_transporter_activity


id: GO:0033668
description: Negative regulation by symbiont of host apoptotic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033668
golevel: 8
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0033668_Negative_regulation_by_symbiont_of_host_apoptotic_process


id: GO:0033744
description: L-methionine:thioredoxin-disulfide S-oxidoreductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033744
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0033744_L-methionine:thioredoxin-disulfide_S-oxidoreductase_activity


id: GO:0033818
description: Beta-ketoacyl-acyl-carrier-protein synthase III activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033818
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0033818_Beta-ketoacyl-acyl-carrier-protein_synthase_III_activity


id: GO:0034023
description: 5-(carboxyamino)imidazole ribonucleotide mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034023
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0034023_5-(carboxyamino)imidazole_ribonucleotide_mutase_activity


id: GO:0034036
description: Purine ribonucleoside bisphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034036
golevel: 10
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0034036_Purine_ribonucleoside_bisphosphate_biosynthetic_process


id: GO:0034249
description: Negative regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034249
golevel: 6
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0034249_Negative_regulation_of_cellular_amide_metabolic_process


id: GO:0034250
description: Positive regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034250
golevel: 6
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0034250_Positive_regulation_of_cellular_amide_metabolic_process


id: GO:0034404
description: Nucleobase-containing small molecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034404
golevel: 6
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0034404_Nucleobase-containing_small_molecule_biosynthetic_process


id: GO:0034639
description: L-amino acid efflux transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034639
golevel: 7
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0034639_L-amino_acid_efflux_transmembrane_transporter_activity


id: GO:0034656
description: Nucleobase-containing small molecule catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034656
golevel: 6
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0034656_Nucleobase-containing_small_molecule_catabolic_process


id: GO:0035592
description: Establishment of protein localization to extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0035592
golevel: 6
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0035592_Establishment_of_protein_localization_to_extracellular_region


id: GO:0035598
description: N6-threonylcarbomyladenosine methylthiotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0035598
golevel: 6
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0035598_N6-threonylcarbomyladenosine_methylthiotransferase_activity


id: GO:0035998
description: 7,8-dihydroneopterin 3-triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0035998
golevel: 6
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0035998_7,8-dihydroneopterin_3-triphosphate_biosynthetic_process


id: GO:0036361
description: Racemase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0036361
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0036361_Racemase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0042083
description: 5,10-methylenetetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042083
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0042083_5,10-methylenetetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042084
description: 5-methyltetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042084
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0042084_5-methyltetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042173
description: Regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042173
golevel: 6
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0042173_Regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0042174
description: Negative regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042174
golevel: 7
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0042174_Negative_regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0042777
description: Proton motive force-driven plasma membrane ATP synthesis
memo: https://amigo.geneontology.org/amigo/term/GO:0042777
golevel: 13
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0042777_Proton_motive_force-driven_plasma_membrane_ATP_synthesis


id: GO:0043225
description: ATPase-coupled inorganic anion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043225
golevel: 6
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0043225_ATPase-coupled_inorganic_anion_transmembrane_transporter_activity


id: GO:0043242
description: Negative regulation of protein-containing complex disassembly
memo: https://amigo.geneontology.org/amigo/term/GO:0043242
golevel: 7
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0043242_Negative_regulation_of_protein-containing_complex_disassembly


id: GO:0043772
description: Acyl-phosphate glycerol-3-phosphate acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043772
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0043772_Acyl-phosphate_glycerol-3-phosphate_acyltransferase_activity


id: GO:0043811
description: Phosphate:acyl-[acyl carrier protein] acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043811
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0043811_Phosphate:acyl-[acyl_carrier_protein]_acyltransferase_activity


id: GO:0044011
description: Single-species biofilm formation on inanimate substrate
memo: https://amigo.geneontology.org/amigo/term/GO:0044011
golevel: 7
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0044011_Single-species_biofilm_formation_on_inanimate_substrate


id: GO:0044419
description: Biological process involved in interspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0044419
golevel: 1
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0044419_Biological_process_involved_in_interspecies_interaction_between_organisms


id: GO:0044769
description: ATPase activity, coupled to transmembrane movement of ions, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0044769
golevel: 7
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0044769_ATPase_activity,_coupled_to_transmembrane_movement_of_ions,_rotational_mechanism


id: GO:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
golevel: 6
name:
  GOCC.STRING_v12.0_1123404_STRINGid_GO:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GO:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
golevel: 6
name:
  GOCC.STRING_v12.0_1123404_STRINGid_GO:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GO:0045881
description: Positive regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0045881
golevel: 7
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0045881_Positive_regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0045934
description: Negative regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045934
golevel: 6
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0045934_Negative_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0045935
description: Positive regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045935
golevel: 6
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0045935_Positive_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0046429
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046429
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0046429_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_synthase_activity


id: GO:0046915
description: Transition metal ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046915
golevel: 6
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0046915_Transition_metal_ion_transmembrane_transporter_activity


id: GO:0046933
description: Proton-transporting ATP synthase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046933
golevel: 8
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0046933_Proton-transporting_ATP_synthase_activity,_rotational_mechanism


id: GO:0046961
description: Proton-transporting ATPase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046961
golevel: 8
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0046961_Proton-transporting_ATPase_activity,_rotational_mechanism


id: GO:0046992
description: Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond
memo: https://amigo.geneontology.org/amigo/term/GO:0046992
golevel: 3
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0046992_Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond


id: GO:0047451
description: 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047451
golevel: 6
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0047451_3-hydroxyoctanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0047480
description: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047480
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0047480_UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine_ligase_activity


id: GO:0048646
description: Anatomical structure formation involved in morphogenesis
memo: https://amigo.geneontology.org/amigo/term/GO:0048646
golevel: 2
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0048646_Anatomical_structure_formation_involved_in_morphogenesis


id: GO:0050485
description: Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0050485
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0050485_Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond,_with_a_disulfide_as_acceptor


id: GO:0050511
description: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050511
golevel: 6
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0050511_Undecaprenyldiphospho-muramoylpentapeptide_beta-N-acetylglucosaminyltransferase_activity


id: GO:0050515
description: 4-(cytidine 5-diphospho)-2-C-methyl-D-erythritol kinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050515
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0050515_4-(cytidine_5-diphospho)-2-C-methyl-D-erythritol_kinase_activity


id: GO:0050518
description: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050518
golevel: 6
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0050518_2-C-methyl-D-erythritol_4-phosphate_cytidylyltransferase_activity


id: GO:0050566
description: asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050566
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0050566_asparaginyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0050567
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050567
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0050567_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0051003
description: Ligase activity, forming nitrogen-metal bonds, forming coordination complexes
memo: https://amigo.geneontology.org/amigo/term/GO:0051003
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0051003_Ligase_activity,_forming_nitrogen-metal_bonds,_forming_coordination_complexes


id: GO:0051075
description: S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051075
golevel: 3
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0051075_S-adenosylmethionine:tRNA_ribosyltransferase-isomerase_activity


id: GO:0051129
description: Negative regulation of cellular component organization
memo: https://amigo.geneontology.org/amigo/term/GO:0051129
golevel: 5
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0051129_Negative_regulation_of_cellular_component_organization


id: GO:0051130
description: Positive regulation of cellular component organization
memo: https://amigo.geneontology.org/amigo/term/GO:0051130
golevel: 5
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0051130_Positive_regulation_of_cellular_component_organization


id: GO:0051172
description: Negative regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051172
golevel: 5
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0051172_Negative_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051173
description: Positive regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051173
golevel: 5
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0051173_Positive_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051240
description: Positive regulation of multicellular organismal process
memo: https://amigo.geneontology.org/amigo/term/GO:0051240
golevel: 4
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0051240_Positive_regulation_of_multicellular_organismal_process


id: GO:0051703
description: Biological process involved in intraspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0051703
golevel: 1
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0051703_Biological_process_involved_in_intraspecies_interaction_between_organisms


id: GO:0051745
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051745
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0051745_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_reductase_activity


id: GO:0051991
memo: https://amigo.geneontology.org/amigo/term/GO:0051991
golevel: 6
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0051991_UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol_4-beta-N-acetylglucosaminlytransferase_activity

description:
  UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity


id: GO:0051992
memo: https://amigo.geneontology.org/amigo/term/GO:0051992
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0051992_UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate_transferase_activity

description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity


id: GO:0052041
description: Negative regulation by symbiont of host programmed cell death
memo: https://amigo.geneontology.org/amigo/term/GO:0052041
golevel: 7
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0052041_Negative_regulation_by_symbiont_of_host_programmed_cell_death


id: GO:0052592
description: Oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0052592
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0052592_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_with_an_iron-sulfur_protein_as_acceptor


id: GO:0052890
description: Oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0052890
golevel: 4
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0052890_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_with_a_flavin_as_acceptor


id: GO:0052908
description: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052908
golevel: 9
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0052908_16S_rRNA_(adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase_activity


id: GO:0052929
description: ATP:3-cytidine-cytidine-tRNA adenylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052929
golevel: 6
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0052929_ATP:3-cytidine-cytidine-tRNA_adenylyltransferase_activity


id: GO:0055052
description: ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing
memo: https://amigo.geneontology.org/amigo/term/GO:0055052
golevel: 7
name:
  GOCC.STRING_v12.0_1123404_STRINGid_GO:0055052_ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing


id: GO:0055086
description: Nucleobase-containing small molecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0055086
golevel: 3
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0055086_Nucleobase-containing_small_molecule_metabolic_process


id: GO:0060567
description: Negative regulation of DNA-templated transcription, termination
memo: https://amigo.geneontology.org/amigo/term/GO:0060567
golevel: 12
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0060567_Negative_regulation_of_DNA-templated_transcription,_termination


id: GO:0061504
description: Cyclic threonylcarbamoyladenosine biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0061504
golevel: 11
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0061504_Cyclic_threonylcarbamoyladenosine_biosynthetic_process


id: GO:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
golevel: 4
name:
  GOCC.STRING_v12.0_1123404_STRINGid_GO:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GO:0071951
description: Conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
memo: https://amigo.geneontology.org/amigo/term/GO:0071951
golevel: 12
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0071951_Conversion_of_methionyl-tRNA_to_N-formyl-methionyl-tRNA


id: GO:0072349
description: Modified amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0072349
golevel: 3
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0072349_Modified_amino_acid_transmembrane_transporter_activity


id: GO:0072531
description: Pyrimidine-containing compound transmembrane transport
memo: https://amigo.geneontology.org/amigo/term/GO:0072531
golevel: 5
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0072531_Pyrimidine-containing_compound_transmembrane_transport


id: GO:0072599
description: Establishment of protein localization to endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0072599
golevel: 7
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0072599_Establishment_of_protein_localization_to_endoplasmic_reticulum


id: GO:0097588
description: Archaeal or bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:0097588
golevel: 4
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0097588_Archaeal_or_bacterial-type_flagellum-dependent_cell_motility


id: GO:0098742
description: Cell-cell adhesion via plasma-membrane adhesion molecules
memo: https://amigo.geneontology.org/amigo/term/GO:0098742
golevel: 4
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0098742_Cell-cell_adhesion_via_plasma-membrane_adhesion_molecules


id: GO:0102552
description: Lipoyl synthase activity (acting on glycine-cleavage complex H protein
memo: https://amigo.geneontology.org/amigo/term/GO:0102552
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0102552_Lipoyl_synthase_activity_(acting_on_glycine-cleavage_complex_H_protein


id: GO:0102553
description: Lipoyl synthase activity (acting on pyruvate dehydrogenase E2 protein)
memo: https://amigo.geneontology.org/amigo/term/GO:0102553
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0102553_Lipoyl_synthase_activity_(acting_on_pyruvate_dehydrogenase_E2_protein)


id: GO:0106074
description: aminoacyl-tRNA metabolism involved in translational fidelity
memo: https://amigo.geneontology.org/amigo/term/GO:0106074
golevel: 9
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:0106074_aminoacyl-tRNA_metabolism_involved_in_translational_fidelity


id: GO:0140078
description: Class I DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0140078
golevel: 5
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:0140078_Class_I_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:1900192
description: Positive regulation of single-species biofilm formation
memo: https://amigo.geneontology.org/amigo/term/GO:1900192
golevel: 7
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:1900192_Positive_regulation_of_single-species_biofilm_formation


id: GO:1900231
description: Regulation of single-species biofilm formation on inanimate substrate
memo: https://amigo.geneontology.org/amigo/term/GO:1900231
golevel: 8
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:1900231_Regulation_of_single-species_biofilm_formation_on_inanimate_substrate


id: GO:1901505
description: Carbohydrate derivative transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901505
golevel: 3
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:1901505_Carbohydrate_derivative_transmembrane_transporter_activity


id: GO:1901618
description: Organic hydroxy compound transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901618
golevel: 3
name:
  GOMF.STRING_v12.0_1123404_STRINGid_GO:1901618_Organic_hydroxy_compound_transmembrane_transporter_activity


id: GO:1902021
description: Regulation of bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:1902021
golevel: 6
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:1902021_Regulation_of_bacterial-type_flagellum-dependent_cell_motility


id: GO:1903507
description: Negative regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903507
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:1903507_Negative_regulation_of_nucleic_acid-templated_transcription


id: GO:1903508
description: Positive regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903508
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:1903508_Positive_regulation_of_nucleic_acid-templated_transcription


id: GO:2000112
description: Regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000112
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:2000112_Regulation_of_cellular_macromolecule_biosynthetic_process


id: GO:2000113
description: Negative regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000113
name:
  GOBP.STRING_v12.0_1123404_STRINGid_GO:2000113_Negative_regulation_of_cellular_macromolecule_biosynthetic_process


id: GOCC:0000159
description: Protein phosphatase type 2A complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000159
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1123404_STRINGid_GOCC:0000159_Protein_phosphatase_type_2A_complex


id: GOCC:0000221
description: Vacuolar proton-transporting V-type ATPase, V1 domain
memo: https://amigo.geneontology.org/amigo/term/GO:0000221
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1123404_STRINGid_GOCC:0000221_Vacuolar_proton-transporting_V-type_ATPase,_V1_domain


id: GOCC:0000324
description: Fungal-type vacuole
memo: https://amigo.geneontology.org/amigo/term/GO:0000324
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1123404_STRINGid_GOCC:0000324_Fungal-type_vacuole


id: GOCC:0000325
description: Plant-type vacuole
memo: https://amigo.geneontology.org/amigo/term/GO:0000325
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1123404_STRINGid_GOCC:0000325_Plant-type_vacuole


id: GOCC:0000329
description: Fungal-type vacuole membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0000329
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1123404_STRINGid_GOCC:0000329_Fungal-type_vacuole_membrane


id: GOCC:0000408
description: EKC/KEOPS complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000408
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1123404_STRINGid_GOCC:0000408_EKC/KEOPS_complex


id: GOCC:0000428
description: DNA-directed RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000428
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1123404_STRINGid_GOCC:0000428_DNA-directed_RNA_polymerase_complex


id: GOCC:0000502
description: Proteasome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000502
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1123404_STRINGid_GOCC:0000502_Proteasome_complex


id: GOCC:0000775
description: Chromosome, centromeric region
memo: https://amigo.geneontology.org/amigo/term/GO:0000775
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1123404_STRINGid_GOCC:0000775_Chromosome,_centromeric_region


id: GOCC:0000779
description: Condensed chromosome, centromeric region
memo: https://amigo.geneontology.org/amigo/term/GO:0000779
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1123404_STRINGid_GOCC:0000779_Condensed_chromosome,_centromeric_region


id: GOCC:0000781
description: Chromosome, telomeric region
memo: https://amigo.geneontology.org/amigo/term/GO:0000781
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1123404_STRINGid_GOCC:0000781_Chromosome,_telomeric_region


id: GOCC:0000793
description: Condensed chromosome
memo: https://amigo.geneontology.org/amigo/term/GO:0000793
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1123404_STRINGid_GOCC:0000793_Condensed_chromosome


id: GOCC:0000930
description: Gamma-tubulin complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000930
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1123404_STRINGid_GOCC:0000930_Gamma-tubulin_complex


id: GOCC:0000931
description: Gamma-tubulin large complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000931
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1123404_STRINGid_GOCC:0000931_Gamma-tubulin_large_complex


id: GOCC:0002189
description: Ribose phosphate diphosphokinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0002189
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1123404_STRINGid_GOCC:0002189_Ribose_phosphate_diphosphokinase_complex


id: GOCC:0005576
description: Extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0005576
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1123404_STRINGid_GOCC:0005576_Extracellular_region


