# geneInfo

ensembl_gene_id: HMPREF9195_00025
symbol: phnC
gene_biotype: protein_coding
description:
  Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.


ensembl_gene_id: HMPREF9195_00049
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: HMPREF9195_00050
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: HMPREF9195_00051
symbol: rpsO
gene_biotype: protein_coding
description:
  Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: HMPREF9195_00053
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine(55) synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: HMPREF9195_00054
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: HMPREF9195_00055
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: HMPREF9195_00056
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription termination factor NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: HMPREF9195_00057
symbol: rimP
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: HMPREF9195_00059
symbol: rsfS
gene_biotype: protein_coding
description:
  Iojap-like ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: HMPREF9195_00062
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: HMPREF9195_00063
symbol: obg
gene_biotype: protein_coding
description:
  Obg family GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: HMPREF9195_00066
symbol: rplU
gene_biotype: protein_coding
description:
  Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: HMPREF9195_00068
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: HMPREF9195_00073
symbol: EPF30061.1
gene_biotype: protein_coding
description:
  YggS family pyridoxal phosphate enzyme; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: HMPREF9195_00076
symbol: EPF30063.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: HMPREF9195_00079
symbol: selA
gene_biotype: protein_coding
description:
  L-seryl-tRNA selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.


ensembl_gene_id: HMPREF9195_00085
symbol: EPF30072.1
gene_biotype: protein_coding
description:
  RsmE family RNA methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: HMPREF9195_00100
symbol: EPF30087.1
gene_biotype: protein_coding
description:
  Flavodoxin; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family.


ensembl_gene_id: HMPREF9195_00104
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: HMPREF9195_00109
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit 2; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: HMPREF9195_00110
symbol: uvrB
gene_biotype: protein_coding
description:
  UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...]


ensembl_gene_id: HMPREF9195_00129
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: HMPREF9195_00131
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: HMPREF9195_00132
symbol: EPF30119.1
gene_biotype: protein_coding
description:
  Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: HMPREF9195_00134
symbol: fusA
gene_biotype: protein_coding
description:
  Elongation factor G 1; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: HMPREF9195_00135
symbol: pfkA
gene_biotype: protein_coding
description:
  Phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.


ensembl_gene_id: HMPREF9195_00148
symbol: fliW
gene_biotype: protein_coding
description:
  Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.


ensembl_gene_id: HMPREF9195_00149
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: HMPREF9195_00158
symbol: EPF30145.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: HMPREF9195_00159
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: HMPREF9195_00169
symbol: EPF30153.1
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: HMPREF9195_00184
symbol: EPF30168.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: HMPREF9195_00194
symbol: grpE
gene_biotype: protein_coding
description:
  Hypothetical protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dep [...]


ensembl_gene_id: HMPREF9195_00196
symbol: dnaJ
gene_biotype: protein_coding
description:
  Chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and  [...]


ensembl_gene_id: HMPREF9195_00198
symbol: EPF29498.1
gene_biotype: protein_coding
description:
  methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: HMPREF9195_00208
symbol: EPF29508.1
gene_biotype: protein_coding
description:
  Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.


ensembl_gene_id: HMPREF9195_00217
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: HMPREF9195_00221
symbol: atpE
gene_biotype: protein_coding
description:
  Hypothetical protein; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: HMPREF9195_00223
symbol: atpA
gene_biotype: protein_coding
description:
  V-type ATP synthase alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: HMPREF9195_00224
symbol: atpB
gene_biotype: protein_coding
description:
  V-type ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.


ensembl_gene_id: HMPREF9195_00238
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: HMPREF9195_00244
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: HMPREF9195_00253
symbol: lon
gene_biotype: protein_coding
description:
  Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: HMPREF9195_00264
symbol: EPF29563.1
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: HMPREF9195_00280
symbol: EPF29579.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: HMPREF9195_00301
symbol: EPF29598.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: HMPREF9195_00304
symbol: der
gene_biotype: protein_coding
description:
  Ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: HMPREF9195_00308
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: HMPREF9195_00309
symbol: hppA
gene_biotype: protein_coding
description:
  V-type H(+)-translocating pyrophosphatase; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily.


ensembl_gene_id: HMPREF9195_00319
symbol: EPF29616.1
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: HMPREF9195_00327
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: HMPREF9195_00328
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: HMPREF9195_00352
symbol: hprK
gene_biotype: protein_coding
description:
  HPr(Ser) kinase/phosphatase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr).


ensembl_gene_id: HMPREF9195_00355
symbol: EPF29652.1
gene_biotype: protein_coding
description:
  Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: HMPREF9195_00356
symbol: ndk
gene_biotype: protein_coding
description:
  Hypothetical protein; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: HMPREF9195_00357
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: HMPREF9195_00360
symbol: secF
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: HMPREF9195_00361
symbol: secD
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: HMPREF9195_00362
symbol: yajC
gene_biotype: protein_coding
description:
  Preprotein translocase, YajC subunit; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: HMPREF9195_00366
symbol: yidC
gene_biotype: protein_coding
description:
  YidC/Oxa1 family membrane protein insertase; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: HMPREF9195_00367
symbol: EPF29664.1
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: HMPREF9195_00374
symbol: thyX
gene_biotype: protein_coding
description:
  Thymidylate synthase thyX; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: HMPREF9195_00381
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: HMPREF9195_00384
symbol: EPF29680.1
gene_biotype: protein_coding
description:
  Flagellar filament core protein; Component of the core of the flagella. Belongs to the bacterial flagellin family.


ensembl_gene_id: HMPREF9195_00386
symbol: EPF29682.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: HMPREF9195_00389
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: HMPREF9195_00393
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosine-tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: HMPREF9195_00394
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanine-tRNA ligase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 2 subfamily.


ensembl_gene_id: HMPREF9195_00395
symbol: murJ
gene_biotype: protein_coding
description:
  Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: HMPREF9195_00399
symbol: sbcD
gene_biotype: protein_coding
description:
  Exonuclease SbcCD, D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: HMPREF9195_00403
symbol: groS
gene_biotype: protein_coding
description:
  Chaperonin; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: HMPREF9195_00404
symbol: EPF29700.1
gene_biotype: protein_coding
description:
  Sigma-70 family RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: HMPREF9195_00409
symbol: EPF29705.1
gene_biotype: protein_coding
description:
  Inosine/guanosine/xanthosine phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: HMPREF9195_00427
symbol: EPF29723.1
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.


ensembl_gene_id: HMPREF9195_00428
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: HMPREF9195_00445
symbol: EPF29741.1
gene_biotype: protein_coding
description:
  Beta-ketoacyl-acyl-carrier-protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: HMPREF9195_00453
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: HMPREF9195_00461
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: HMPREF9195_00462
symbol: rnfB
gene_biotype: protein_coding
description:
  Electron transport complex, rnfabcdge type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.


ensembl_gene_id: HMPREF9195_00463
symbol: rnfA
gene_biotype: protein_coding
description:
  Electron transport complex, rnfabcdge type, A subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: HMPREF9195_00464
symbol: rnfE
gene_biotype: protein_coding
description:
  Electron transport complex, rnfabcdge type, E subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: HMPREF9195_00466
symbol: rnfD
gene_biotype: protein_coding
description:
  Electron transport complex, rnfabcdge type, D subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: HMPREF9195_00467
symbol: rnfC
gene_biotype: protein_coding
description:
  Electron transport complex, rnfabcdge type, C subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.


ensembl_gene_id: HMPREF9195_00468
symbol: fabV
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon-carbon double bond in an enoyl moiety that is covalently linked to a coenzyme A (CoA); Belongs to the TER reductase family.


ensembl_gene_id: HMPREF9195_00469
symbol: EPF29764.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: HMPREF9195_00471
symbol: accD
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: HMPREF9195_00472
symbol: accA
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: HMPREF9195_00474
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: HMPREF9195_00478
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: HMPREF9195_00480
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: HMPREF9195_00481
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: HMPREF9195_00493
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: HMPREF9195_00504
symbol: ldh
gene_biotype: protein_coding
description:
  L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.


ensembl_gene_id: HMPREF9195_00534
symbol: metN
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: HMPREF9195_00574
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase 1; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: HMPREF9195_00598
symbol: mtnK
gene_biotype: protein_coding
description:
  5-methylthioribose kinase; Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.


ensembl_gene_id: HMPREF9195_00603
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: HMPREF9195_00604
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: HMPREF9195_00605
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: HMPREF9195_00607
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: HMPREF9195_00608
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: HMPREF9195_00610
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: HMPREF9195_00611
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: HMPREF9195_00612
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: HMPREF9195_00613
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: HMPREF9195_00614
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: HMPREF9195_00615
symbol: rplX
gene_biotype: protein_coding
description:
  Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: HMPREF9195_00616
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: HMPREF9195_00617
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: HMPREF9195_00619
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: HMPREF9195_00620
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: HMPREF9195_00621
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: HMPREF9195_00622
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: HMPREF9195_00623
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: HMPREF9195_00624
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: HMPREF9195_00626
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: HMPREF9195_00627
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: HMPREF9195_00628
symbol: tuf
gene_biotype: protein_coding
description:
  Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: HMPREF9195_00630
symbol: EPF29916.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor synthesis domain-containing protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: HMPREF9195_00631
symbol: EPF29917.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor synthesis domain-containing protein; Overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9195_00633
symbol: EPF29919.1
gene_biotype: protein_coding
description:
  Molybdate ABC transporter, permease; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: HMPREF9195_00646
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase UppP; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: HMPREF9195_00651
symbol: nusB
gene_biotype: protein_coding
description:
  Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: HMPREF9195_00653
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: HMPREF9195_00656
symbol: rlpA
gene_biotype: protein_coding
description:
  Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: HMPREF9195_00680
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction ATP-dependent DNA helicase ruvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: HMPREF9195_00682
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: HMPREF9195_00684
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: HMPREF9195_00688
symbol: EPF29402.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase (GGDEF) domain-containing protein; Overlaps another CDS with the same product name.


ensembl_gene_id: HMPREF9195_00705
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: HMPREF9195_00712
symbol: acpP-2
gene_biotype: protein_coding
description:
  Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.


ensembl_gene_id: HMPREF9195_00731
symbol: dinB
gene_biotype: protein_coding
description:
  Hypothetical protein; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: HMPREF9195_00759
symbol: fusA-2
gene_biotype: protein_coding
description:
  Elongation factor G 2; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: HMPREF9195_00774
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated endoribonuclease cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: HMPREF9195_00776
symbol: cas1
gene_biotype: protein_coding
description:
  CRISPR-associated endonuclease cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: HMPREF9195_00790
symbol: EPF29282.1
gene_biotype: protein_coding
description:
  DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]


ensembl_gene_id: HMPREF9195_00791
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: HMPREF9195_00795
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: HMPREF9195_00807
symbol: EPF29298.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: HMPREF9195_00839
symbol: pfkA-2
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP-dependent clade 'X' sub-subfamily.


ensembl_gene_id: HMPREF9195_00841
symbol: nnrE
gene_biotype: protein_coding
description:
  YjeF family domain-containing protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the r [...]


ensembl_gene_id: HMPREF9195_00842
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: HMPREF9195_00843
symbol: glyQS
gene_biotype: protein_coding
description:
  glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: HMPREF9195_00861
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: HMPREF9195_00866
symbol: EPF29356.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: HMPREF9195_00868
symbol: EPF29358.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: HMPREF9195_00876
symbol: EPF29366.1
gene_biotype: protein_coding
description:
  8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.


ensembl_gene_id: HMPREF9195_00878
symbol: EPF29368.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: HMPREF9195_00880
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: HMPREF9195_00886
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: HMPREF9195_00939
symbol: EPF29158.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: HMPREF9195_00946
symbol: rsmI
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: HMPREF9195_00959
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: HMPREF9195_00961
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: HMPREF9195_00986
symbol: clpB
gene_biotype: protein_coding
description:
  Chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: HMPREF9195_00989
symbol: EPF29204.1
gene_biotype: protein_coding
description:
  RluA family pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: HMPREF9195_00992
symbol: EPF29207.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.


ensembl_gene_id: HMPREF9195_00996
symbol: galK
gene_biotype: protein_coding
description:
  Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.


ensembl_gene_id: HMPREF9195_01009
symbol: potA
gene_biotype: protein_coding
description:
  Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.


ensembl_gene_id: HMPREF9195_01016
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: HMPREF9195_01019
symbol: EPF29234.1
gene_biotype: protein_coding
description:
  Betaine/carnitine/choline transporter (BCCT) family transporter; Belongs to the BCCT transporter (TC 2.A.15) family.


ensembl_gene_id: HMPREF9195_01054
symbol: EPF29057.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.


ensembl_gene_id: HMPREF9195_01070
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: HMPREF9195_01094
symbol: EPF29097.1
gene_biotype: protein_coding
description:
  Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: HMPREF9195_01101
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: HMPREF9195_01104
symbol: secA
gene_biotype: protein_coding
description:
  Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: HMPREF9195_01114
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: HMPREF9195_01122
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: HMPREF9195_01123
symbol: clpP-2
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit 1; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: HMPREF9195_01124
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: HMPREF9195_01126
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramyl-tripeptide synthetase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.


ensembl_gene_id: HMPREF9195_01146
symbol: lepA
gene_biotype: protein_coding
description:
  Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: HMPREF9195_01151
symbol: EPF28910.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase, catabolic; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: HMPREF9195_01156
symbol: EPF28915.1
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine-D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: HMPREF9195_01162
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: HMPREF9195_01173
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: HMPREF9195_01178
symbol: EPF28937.1
gene_biotype: protein_coding
description:
  SufS family cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.


ensembl_gene_id: HMPREF9195_01183
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: HMPREF9195_01186
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: HMPREF9195_01187
symbol: EPF28945.1
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: HMPREF9195_01194
symbol: rbsK
gene_biotype: protein_coding
description:
  Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: HMPREF9195_01196
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: HMPREF9195_01210
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: HMPREF9195_01219
symbol: rny
gene_biotype: protein_coding
description:
  2',3'-cyclic-nucleotide 2'-phosphodiesterase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.


ensembl_gene_id: HMPREF9195_01221
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: HMPREF9195_01234
symbol: mutS2
gene_biotype: protein_coding
description:
  MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: HMPREF9195_01259
symbol: ade
gene_biotype: protein_coding
description:
  Adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.


ensembl_gene_id: HMPREF9195_01269
symbol: EPF29025.1
gene_biotype: protein_coding
description:
  Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain; Belongs to the ABC transporter superfamily.


ensembl_gene_id: HMPREF9195_01288
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: HMPREF9195_01298
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: HMPREF9195_01299
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription termination/antitermination factor NusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: HMPREF9195_01300
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: HMPREF9195_01301
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: HMPREF9195_01302
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: HMPREF9195_01303
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: HMPREF9195_01304
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: HMPREF9195_01306
symbol: rpsL
gene_biotype: protein_coding
description:
  30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: HMPREF9195_01307
symbol: rpsG
gene_biotype: protein_coding
description:
  30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: HMPREF9195_01312
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: HMPREF9195_01325
symbol: EPF28627.1
gene_biotype: protein_coding
description:
  MTA/SAH nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.


ensembl_gene_id: HMPREF9195_01326
symbol: rpiA
gene_biotype: protein_coding
description:
  Ribose 5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.


ensembl_gene_id: HMPREF9195_01343
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: HMPREF9195_01347
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: HMPREF9195_01357
symbol: thiI
gene_biotype: protein_coding
description:
  tRNA sulfurtransferase ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.


ensembl_gene_id: HMPREF9195_01362
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: HMPREF9195_01382
symbol: queH
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: HMPREF9195_01386
symbol: nagB
gene_biotype: protein_coding
description:
  Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. NagB subfamily.


ensembl_gene_id: HMPREF9195_01388
symbol: EPF28492.1
gene_biotype: protein_coding
description:
  3-deoxy-7-phosphoheptulonate synthase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).


ensembl_gene_id: HMPREF9195_01415
symbol: ispE
gene_biotype: protein_coding
description:
  4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: HMPREF9195_01418
symbol: rplY
gene_biotype: protein_coding
description:
  Ribosomal protein L25, Ctc-form; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: HMPREF9195_01419
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: HMPREF9195_01422
symbol: msrA
gene_biotype: protein_coding
description:
  methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: HMPREF9195_01427
symbol: EPF28530.1
gene_biotype: protein_coding
description:
  Sodium/glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family.


ensembl_gene_id: HMPREF9195_01428
symbol: EPF28531.1
gene_biotype: protein_coding
description:
  Sodium pump decarboxylase, gamma subunit; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the OadG family.


ensembl_gene_id: HMPREF9195_01448
symbol: ybeY
gene_biotype: protein_coding
description:
  YbeY/UPF0054 family metalloprotein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: HMPREF9195_01480
symbol: cheB
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: HMPREF9195_01491
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: HMPREF9195_01501
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: HMPREF9195_01516
symbol: murQ
gene_biotype: protein_coding
description:
  N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.


ensembl_gene_id: HMPREF9195_01520
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: HMPREF9195_01527
symbol: EPF28318.1
gene_biotype: protein_coding
description:
  Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: HMPREF9195_01528
symbol: EPF28319.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: HMPREF9195_01534
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: HMPREF9195_01536
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: HMPREF9195_01551
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: HMPREF9195_01552
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: HMPREF9195_01567
symbol: EPF28358.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: HMPREF9195_01568
symbol: EPF28359.1
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.


ensembl_gene_id: HMPREF9195_01569
symbol: EPF28360.1
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.


ensembl_gene_id: HMPREF9195_01571
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein fliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: HMPREF9195_01572
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: HMPREF9195_01573
symbol: EPF28364.1
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: HMPREF9195_01574
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: HMPREF9195_01575
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: HMPREF9195_01586
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: HMPREF9195_01595
symbol: xerC
gene_biotype: protein_coding
description:
  Hypothetical protein; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: HMPREF9195_01596
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: HMPREF9195_01604
symbol: engB
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTP-binding protein YsxC; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: HMPREF9195_01614
symbol: EPF28405.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: HMPREF9195_01615
symbol: EPF28406.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: HMPREF9195_01623
symbol: metG
gene_biotype: protein_coding
description:
  methionine-tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: HMPREF9195_01625
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: HMPREF9195_01637
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: HMPREF9195_01638
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: HMPREF9195_01639
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: HMPREF9195_01674
symbol: ruvC
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease ruvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: HMPREF9195_01679
symbol: guaA
gene_biotype: protein_coding
description:
  GMP synthase (glutamine-hydrolyzing) domain-containing protein; Catalyzes the synthesis of GMP from XMP.


ensembl_gene_id: HMPREF9195_01680
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: HMPREF9195_01682
symbol: EPF28470.1
gene_biotype: protein_coding
description:
  YbaB/EbfC family DNA-binding protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: HMPREF9195_01683
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: HMPREF9195_01690
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: HMPREF9195_01714
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: HMPREF9195_01719
symbol: lolD
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.


ensembl_gene_id: HMPREF9195_01722
symbol: rlmE
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase E; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.


ensembl_gene_id: HMPREF9195_01780
symbol: smc
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: HMPREF9195_01781
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: HMPREF9195_01786
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: HMPREF9195_01789
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: HMPREF9195_01791
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: HMPREF9195_01809
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA (guanine(527)-N(7))-methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: HMPREF9195_01819
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: HMPREF9195_01821
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: HMPREF9195_01825
symbol: dacA
gene_biotype: protein_coding
description:
  TIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: HMPREF9195_01827
symbol: acpS
gene_biotype: protein_coding
description:
  Phosphopantetheine-protein transferase domain; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: HMPREF9195_01829
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine(38-40) synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: HMPREF9195_01838
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: HMPREF9195_01840
symbol: folD
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: HMPREF9195_01841
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: HMPREF9195_01851
symbol: EPF28160.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: HMPREF9195_01857
symbol: EPF28166.1
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: HMPREF9195_01858
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: HMPREF9195_01859
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: HMPREF9195_01863
symbol: rnz
gene_biotype: protein_coding
description:
  Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.


ensembl_gene_id: HMPREF9195_01882
symbol: nadK
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: HMPREF9195_01887
symbol: proS
gene_biotype: protein_coding
description:
  proline-tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacyl [...]


ensembl_gene_id: HMPREF9195_01889
symbol: EPF28197.1
gene_biotype: protein_coding
description:
  Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: HMPREF9195_01891
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: HMPREF9195_01892
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: HMPREF9195_01893
symbol: EPF28201.1
gene_biotype: protein_coding
description:
  Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: HMPREF9195_01895
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: HMPREF9195_01906
symbol: EPF28214.1
gene_biotype: protein_coding
description:
  Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.


ensembl_gene_id: HMPREF9195_01912
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: HMPREF9195_01917
symbol: gpmA
gene_biotype: protein_coding
description:
  2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: HMPREF9195_01918
symbol: uvrA
gene_biotype: protein_coding
description:
  UvrABC system protein A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: HMPREF9195_01931
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: HMPREF9195_01935
symbol: ftsH
gene_biotype: protein_coding
description:
  ATP-dependent zinc metalloprotease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: HMPREF9195_01942
symbol: EPF28250.1
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: HMPREF9195_01968
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: HMPREF9195_01978
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: HMPREF9195_01980
symbol: EPF27850.1
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: HMPREF9195_01997
symbol: EPF27867.1
gene_biotype: protein_coding
description:
  Lactate permease (LctP) family transporter; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: HMPREF9195_02001
symbol: anmK
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.


ensembl_gene_id: HMPREF9195_02012
symbol: cutC
gene_biotype: protein_coding
description:
  Copper homeostasis protein CutC; Participates in the control of copper homeostasis. Belongs to the CutC family.


ensembl_gene_id: HMPREF9195_02048
symbol: tsaD
gene_biotype: protein_coding
description:
  glycoprotease/Kae1 family metallohydrolase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: HMPREF9195_02053
symbol: recA
gene_biotype: protein_coding
description:
  Protein recA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: HMPREF9195_02054
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: HMPREF9195_02055
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: HMPREF9195_02094
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: HMPREF9195_02097
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: HMPREF9195_02164
symbol: EPF27666.1
gene_biotype: protein_coding
description:
  DNA (cytosine-5-)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.


ensembl_gene_id: HMPREF9195_02174
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: HMPREF9195_02175
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: HMPREF9195_02177
symbol: rodA
gene_biotype: protein_coding
description:
  Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: HMPREF9195_02184
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: HMPREF9195_02185
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: HMPREF9195_02186
symbol: mltG
gene_biotype: protein_coding
description:
  Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: HMPREF9195_02192
symbol: EPF27694.1
gene_biotype: protein_coding
description:
  RdgB/HAM1 family non-canonical purine NTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: HMPREF9195_02207
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: HMPREF9195_02211
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: HMPREF9195_02212
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: HMPREF9195_02242
symbol: EPF27742.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: HMPREF9195_02243
symbol: hslV
gene_biotype: protein_coding
description:
  ATP-dependent protease subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: HMPREF9195_02244
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent protease ATPase subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: HMPREF9195_02245
symbol: EPF27745.1
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: HMPREF9195_02249
symbol: EPF27749.1
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.


ensembl_gene_id: HMPREF9195_02265
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: HMPREF9195_02282
symbol: pfp
gene_biotype: protein_coding
description:
  Diphosphate-fructose-6-phosphate 1-phosphotransferase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.


ensembl_gene_id: HMPREF9195_02287
symbol: rsmA
gene_biotype: protein_coding
description:
  Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: HMPREF9195_02305
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.


ensembl_gene_id: HMPREF9195_02338
symbol: rsmH
gene_biotype: protein_coding
description:
  S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: HMPREF9195_02340
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: HMPREF9195_02343
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: HMPREF9195_02344
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: HMPREF9195_02355
symbol: EPF27603.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: HMPREF9195_02356
symbol: moaC
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: HMPREF9195_02359
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: HMPREF9195_02366
symbol: rex
gene_biotype: protein_coding
description:
  Hypothetical protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: HMPREF9195_02371
symbol: pckG
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase [GTP]; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family.


ensembl_gene_id: HMPREF9195_02375
symbol: EPF27623.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.


# pathwayInfo

id: CL:101
description: Ribosomal protein, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:101_Ribosomal_protein,_and_Translation_regulator_activity


id: CL:102
description: Ribosomal protein, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:102_Ribosomal_protein,_and_Translation_regulator_activity


id: CL:1047
description: N-acetylglucosamine metabolic process, and Efflux transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1047_N-acetylglucosamine_metabolic_process,_and_Efflux_transmembrane_transporter_activity


id: CL:1056
description: Mixed, incl. Threonine metabolic process, and Beta-eliminating lyase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1056_Mixed,_incl._Threonine_metabolic_process,_and_Beta-eliminating_lyase


id: CL:1057
description: Mixed, incl. Aspartate family amino acid catabolic process, and One-carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1057_Mixed,_incl._Aspartate_family_amino_acid_catabolic_process,_and_One-carbon_metabolism


id: CL:1068
description: Threonine synthase activity, and Beta-eliminating lyase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1068_Threonine_synthase_activity,_and_Beta-eliminating_lyase


id: CL:1077
description: Mixed, incl. Isoprenoid metabolic process, and Dicarboxylic acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1077_Mixed,_incl._Isoprenoid_metabolic_process,_and_Dicarboxylic_acid_biosynthetic_process


id: CL:1078
description: Mixed, incl. Isoprenoid metabolic process, and Dicarboxylic acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1078_Mixed,_incl._Isoprenoid_metabolic_process,_and_Dicarboxylic_acid_biosynthetic_process


id: CL:1079
description: Isoprenoid metabolic process, and Dicarboxylic acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1079_Isoprenoid_metabolic_process,_and_Dicarboxylic_acid_biosynthetic_process


id: CL:1083
description: Isopentenyl diphosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1083_Isopentenyl_diphosphate_metabolic_process


id: CL:1107
description: Dicarboxylic acid biosynthetic process, and Tetrahydrofolate interconversion
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1107_Dicarboxylic_acid_biosynthetic_process,_and_Tetrahydrofolate_interconversion


id: CL:1109
description: Chorismate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1109_Chorismate_biosynthetic_process


id: CL:1119
description: Pteridine-containing compound metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1119_Pteridine-containing_compound_metabolic_process


id: CL:1129
description: Chromosome partition, and Phospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1129_Chromosome_partition,_and_Phospholipid_metabolism


id: CL:1147
description: Mixed, incl. UTP metabolic process, and Positive regulation of molecular function
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1147_Mixed,_incl._UTP_metabolic_process,_and_Positive_regulation_of_molecular_function


id: CL:1160
description: Mixed, incl. Serine-type endopeptidase activity, and Flavodoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1160_Mixed,_incl._Serine-type_endopeptidase_activity,_and_Flavodoxin


id: CL:1161
description: Mixed, incl. Flavodoxin, and Trypsin-like serine protease
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1161_Mixed,_incl._Flavodoxin,_and_Trypsin-like_serine_protease


id: CL:1164
description: Flavodoxin, and NADPH-dependent FMN reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1164_Flavodoxin,_and_NADPH-dependent_FMN_reductase


id: CL:1177
description: Mixed, incl. Trypsin-like serine protease, and Polyol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1177_Mixed,_incl._Trypsin-like_serine_protease,_and_Polyol_metabolic_process


id: CL:1188
description: Mixed, incl. PP-loop family, and Trypsin-like peptidase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1188_Mixed,_incl._PP-loop_family,_and_Trypsin-like_peptidase_domain


id: CL:1197
description: Mixed, incl. Sigma-70 factor, region 1.2, and CarD-like/TRCF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1197_Mixed,_incl._Sigma-70_factor,_region_1.2,_and_CarD-like/TRCF_domain


id: CL:1199
description: Mixed, incl. Putative zinc- or iron-chelating domain, and Lytic endotransglycosylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1199_Mixed,_incl._Putative_zinc-_or_iron-chelating_domain,_and_Lytic_endotransglycosylase_activity


id: CL:1216
description: Mixed, incl. Signal peptide processing, and Elongator protein 3, MiaB family, Radical SAM
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1216_Mixed,_incl._Signal_peptide_processing,_and_Elongator_protein_3,_MiaB_family,_Radical_SAM


id: CL:1218
description: Mixed, incl. Elongator protein 3, MiaB family, Radical SAM, and Phosphate acyltransferases
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1218_Mixed,_incl._Elongator_protein_3,_MiaB_family,_Radical_SAM,_and_Phosphate_acyltransferases


id: CL:1234
description: Signal peptide processing, and Aspartic-type peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1234_Signal_peptide_processing,_and_Aspartic-type_peptidase_activity


id: CL:1250
description: Mixed, incl. Selenocompound metabolism, and Sulfur compound metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1250_Mixed,_incl._Selenocompound_metabolism,_and_Sulfur_compound_metabolic_process


id: CL:1251
description: Mixed, incl. Selenocompound metabolism, and Sulfur compound metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1251_Mixed,_incl._Selenocompound_metabolism,_and_Sulfur_compound_metabolic_process


id: CL:1252
description: Mixed, incl. Selenocompound metabolism, and Iron-sulfur cluster assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1252_Mixed,_incl._Selenocompound_metabolism,_and_Iron-sulfur_cluster_assembly


id: CL:1254
description: Mixed, incl. Selenocompound metabolism, and Ketone catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1254_Mixed,_incl._Selenocompound_metabolism,_and_Ketone_catabolic_process


id: CL:1255
description: Selenocompound metabolism, and Iron-sulfur cluster assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1255_Selenocompound_metabolism,_and_Iron-sulfur_cluster_assembly


id: CL:1256
description: Mixed, incl. Iron-sulfur cluster assembly, and Sulfurtransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1256_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Sulfurtransferase_activity


id: CL:1257
description: Sulfur relay system, and Cysteine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1257_Sulfur_relay_system,_and_Cysteine_metabolic_process


id: CL:1270
description: Iron-sulfur cluster assembly, and YmdB-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1270_Iron-sulfur_cluster_assembly,_and_YmdB-like_protein


id: CL:1293
description: Ketone catabolic process, and Glyoxalase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1293_Ketone_catabolic_process,_and_Glyoxalase-like_domain


id: CL:1319
description: Mixed, incl. Antioxidant activity, and Ferric uptake regulator family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1319_Mixed,_incl._Antioxidant_activity,_and_Ferric_uptake_regulator_family


id: CL:1321
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1321_Cytochrome_complex_assembly,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor

description:
  Cytochrome complex assembly, and Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor


id: CL:1337
description: Peroxidase activity, and Ferric uptake regulator family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1337_Peroxidase_activity,_and_Ferric_uptake_regulator_family


id: CL:1351
description: Mixed, incl. BFD-like [2Fe-2S] binding domain, and Protein of unknown function (DUF1667)
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1351_Mixed,_incl._BFD-like_[2Fe-2S]_binding_domain,_and_Protein_of_unknown_function_(DUF1667)


id: CL:1369
description: Mixed, incl. Peptidoglycan metabolic process, and Peptidase family M23
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1369_Mixed,_incl._Peptidoglycan_metabolic_process,_and_Peptidase_family_M23


id: CL:1370
description: Mixed, incl. Peptidoglycan metabolic process, and Peptidase family M23
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1370_Mixed,_incl._Peptidoglycan_metabolic_process,_and_Peptidase_family_M23


id: CL:1372
description: Mixed, incl. Peptidoglycan metabolic process, and Peptidase family M23
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1372_Mixed,_incl._Peptidoglycan_metabolic_process,_and_Peptidase_family_M23


id: CL:1373
description: Mixed, incl. Peptidoglycan metabolic process, and Peptidase family M23
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1373_Mixed,_incl._Peptidoglycan_metabolic_process,_and_Peptidase_family_M23


id: CL:1374
description: Mixed, incl. Aminoglycan biosynthetic process, and Peptidase family M23
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1374_Mixed,_incl._Aminoglycan_biosynthetic_process,_and_Peptidase_family_M23


id: CL:1375
description: Mixed, incl. Aminoglycan biosynthetic process, and Peptidase family M23
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1375_Mixed,_incl._Aminoglycan_biosynthetic_process,_and_Peptidase_family_M23


id: CL:1376
description: Mixed, incl. Aminoglycan biosynthetic process, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1376_Mixed,_incl._Aminoglycan_biosynthetic_process,_and_Cell_division_site


id: CL:1378
description: Regulation of cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1378_Regulation_of_cell_shape,_and_Cell_division_site


id: CL:1379
description: Aminoglycan biosynthetic process, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1379_Aminoglycan_biosynthetic_process,_and_Cell_division_site


id: CL:1384
description: Mur ligase family, glutamate ligase domain, and Lipid glycosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1384_Mur_ligase_family,_glutamate_ligase_domain,_and_Lipid_glycosylation


id: CL:1406
description: Cell division site, and Cell cycle protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1406_Cell_division_site,_and_Cell_cycle_protein


id: CL:1421
description: Mixed, incl. Hsp70 protein, and Cell cycle protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1421_Mixed,_incl._Hsp70_protein,_and_Cell_cycle_protein


id: CL:1432
description: Transglycosylase, and Peptidase family M23
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1432_Transglycosylase,_and_Peptidase_family_M23


id: CL:1442
description: Mixed, incl. Carboxypeptidase activity, and TRAM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1442_Mixed,_incl._Carboxypeptidase_activity,_and_TRAM_domain


id: CL:1457
description: Mixed, incl. Translational initiation, and Protein serine/threonine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1457_Mixed,_incl._Translational_initiation,_and_Protein_serine/threonine_kinase_activity


id: CL:1469
description: Mixed, incl. Transglycosylase SLT domain, and Undecaprenyl-diphosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1469_Mixed,_incl._Transglycosylase_SLT_domain,_and_Undecaprenyl-diphosphatase_activity


id: CL:1478
description: Mixed, incl. Peptidase family M23, and LysR substrate binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1478_Mixed,_incl._Peptidase_family_M23,_and_LysR_substrate_binding_domain


id: CL:1505
description: Mixed, incl. Alanine racemase, N-terminal domain, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1505_Mixed,_incl._Alanine_racemase,_N-terminal_domain,_and_Glycosyl_transferase_family_2


id: CL:1516
description: Mixed, incl. tRNA processing, and rRNA methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1516_Mixed,_incl._tRNA_processing,_and_rRNA_methyltransferase_activity


id: CL:1518
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Septum formation initiator
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1518_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Septum_formation_initiator


id: CL:1520
description: tRNA threonylcarbamoyladenosine modification, and Carbohydrate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1520_tRNA_threonylcarbamoyladenosine_modification,_and_Carbohydrate_metabolic_process


id: CL:154
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:154_Structural_constituent_of_ribosome


id: CL:1544
description: Mixed, incl. tRNA dihydrouridine synthesis, and RNA methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1544_Mixed,_incl._tRNA_dihydrouridine_synthesis,_and_RNA_methyltransferase_activity


id: CL:1545
description: Mixed, incl. rRNA (guanine-N7)-methylation, and tRNA dihydrouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1545_Mixed,_incl._rRNA_(guanine-N7)-methylation,_and_tRNA_dihydrouridine_synthesis


id: CL:1554
description: Mixed, incl. tRNA dihydrouridine synthesis, and TatD related DNase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1554_Mixed,_incl._tRNA_dihydrouridine_synthesis,_and_TatD_related_DNase


id: CL:1564
description: Mixed, incl. Arginine biosynthesis, and Lysine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1564_Mixed,_incl._Arginine_biosynthesis,_and_Lysine_metabolic_process


id: CL:1565
description: Mixed, incl. Arginine biosynthesis, and N-acetyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1565_Mixed,_incl._Arginine_biosynthesis,_and_N-acetyltransferase_activity


id: CL:1566
description: Mixed, incl. Arginine biosynthesis, and Vitamin B6 binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1566_Mixed,_incl._Arginine_biosynthesis,_and_Vitamin_B6_binding


id: CL:1568
description: Mixed, incl. Diaminopimelate biosynthetic process, and Ornithine carbamoyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1568_Mixed,_incl._Diaminopimelate_biosynthetic_process,_and_Ornithine_carbamoyltransferase_activity


id: CL:1586
description: Mixed, incl. Sucrose-6F-phosphate phosphohydrolase, and Tyrosine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1586_Mixed,_incl._Sucrose-6F-phosphate_phosphohydrolase,_and_Tyrosine_metabolism


id: CL:1596
description: Acetyltransferase (GNAT) domain, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1596_Acetyltransferase_(GNAT)_domain,_and_Acetyltransferase_(GNAT)_domain


id: CL:1608
description: Lysine metabolic process, and FtsJ-like methyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1608_Lysine_metabolic_process,_and_FtsJ-like_methyltransferase


id: CL:1624
description: Mixed, incl. Transporter associated domain, and Endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1624_Mixed,_incl._Transporter_associated_domain,_and_Endonuclease


id: CL:1626
description: Mixed, incl. CBS domain, and CMP kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1626_Mixed,_incl._CBS_domain,_and_CMP_kinase_activity


id: CL:1642
description: Mixed, incl. Histidine biosynthesis, and ATPase domain of DNA mismatch repair MUTS family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1642_Mixed,_incl._Histidine_biosynthesis,_and_ATPase_domain_of_DNA_mismatch_repair_MUTS_family


id: CL:1654
description: Mixed, incl. Carbohydrate metabolic process, and TPR repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1654_Mixed,_incl._Carbohydrate_metabolic_process,_and_TPR_repeat


id: CL:1655
description: Mixed, incl. Carbohydrate metabolic process, and TPR repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1655_Mixed,_incl._Carbohydrate_metabolic_process,_and_TPR_repeat


id: CL:1656
description: Mixed, incl. Carbohydrate metabolic process, and TPR repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1656_Mixed,_incl._Carbohydrate_metabolic_process,_and_TPR_repeat


id: CL:1657
description: Mixed, incl. TPR repeat, and Starch and sucrose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1657_Mixed,_incl._TPR_repeat,_and_Starch_and_sucrose_metabolism


id: CL:1659
description: Mixed, incl. TPR repeat, and Starch and sucrose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1659_Mixed,_incl._TPR_repeat,_and_Starch_and_sucrose_metabolism


id: CL:1660
description: Mixed, incl. TPR repeat, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1660_Mixed,_incl._TPR_repeat,_and_Signal


id: CL:1662
description: Mixed, incl. TPR repeat, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1662_Mixed,_incl._TPR_repeat,_and_Signal


id: CL:1663
description: Mixed, incl. TPR repeat, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1663_Mixed,_incl._TPR_repeat,_and_Signal


id: CL:1665
description: Mixed, incl. TPR repeat, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1665_Mixed,_incl._TPR_repeat,_and_Signal


id: CL:1668
description: Mixed, incl. TPR repeat, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1668_Mixed,_incl._TPR_repeat,_and_Signal


id: CL:1670
description: Mixed, incl. TPR repeat, and Oligosaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1670_Mixed,_incl._TPR_repeat,_and_Oligosaccharide_metabolic_process


id: CL:1672
description: Mixed, incl. TPR repeat, and Cyclic nucleotide-monophosphate binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1672_Mixed,_incl._TPR_repeat,_and_Cyclic_nucleotide-monophosphate_binding_domain


id: CL:1673
description: Mixed, incl. TPR repeat, and Cyclic nucleotide-monophosphate binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1673_Mixed,_incl._TPR_repeat,_and_Cyclic_nucleotide-monophosphate_binding_domain


id: CL:1674
description: Mixed, incl. Cyclic nucleotide-monophosphate binding domain, and TPR repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1674_Mixed,_incl._Cyclic_nucleotide-monophosphate_binding_domain,_and_TPR_repeat


id: CL:1676
description: Mixed, incl. Periplasmic space, and FecR protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1676_Mixed,_incl._Periplasmic_space,_and_FecR_protein


id: CL:1678
description: Mixed, incl. FecR protein, and Protein import
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1678_Mixed,_incl._FecR_protein,_and_Protein_import


id: CL:1696
description: Mixed, incl. Outer membrane lipoprotein carrier protein LolA, and Fibronectin type 3 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1696_Mixed,_incl._Outer_membrane_lipoprotein_carrier_protein_LolA,_and_Fibronectin_type_3_domain


id: CL:172
description: Mixed, incl. Small ribosomal subunit, and Translational readthrough
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:172_Mixed,_incl._Small_ribosomal_subunit,_and_Translational_readthrough


id: CL:1736
description: Mixed, incl. D-ala D-ala ligase C-terminus, and Peptidoglycan catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1736_Mixed,_incl._D-ala_D-ala_ligase_C-terminus,_and_Peptidoglycan_catabolic_process


id: CL:1754
description: Mixed, incl. Lipid binding, and Dephosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1754_Mixed,_incl._Lipid_binding,_and_Dephosphorylation


id: CL:1771
description: Mostly uncharacterized, incl. PD-(D/E)XK nuclease superfamily, and Ether lipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1771_Mostly_uncharacterized,_incl._PD-(D/E)XK_nuclease_superfamily,_and_Ether_lipid_metabolism


id: CL:1775
description: Mostly uncharacterized, incl. Ether lipid metabolism, and Heme metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1775_Mostly_uncharacterized,_incl._Ether_lipid_metabolism,_and_Heme_metabolic_process


id: CL:1777
description: Mixed, incl. Heme metabolic process, and Thylakoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1777_Mixed,_incl._Heme_metabolic_process,_and_Thylakoid


id: CL:1825
description: Membrane organization, and Carboxysome
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1825_Membrane_organization,_and_Carboxysome


id: CL:1838
description: Mixed, incl. Protein transport, and Cell outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1838_Mixed,_incl._Protein_transport,_and_Cell_outer_membrane


id: CL:1839
description: Mixed, incl. Receptor, and MotA/TolQ/ExbB proton channel family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1839_Mixed,_incl._Receptor,_and_MotA/TolQ/ExbB_proton_channel_family


id: CL:1850
description: Mixed, incl. Anion-transporting ATPase, and Flagellar Assembly Protein A beta solenoid domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1850_Mixed,_incl._Anion-transporting_ATPase,_and_Flagellar_Assembly_Protein_A_beta_solenoid_domain


id: CL:1877
description: 4-alpha-glucanotransferase, and Alpha amylase, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1877_4-alpha-glucanotransferase,_and_Alpha_amylase,_catalytic_domain


id: CL:1911
description: Mixed, incl. Chromosome condensation, and Carbon-nitrogen hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1911_Mixed,_incl._Chromosome_condensation,_and_Carbon-nitrogen_hydrolase


id: CL:1920
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1920_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthetic_process


id: CL:1922
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1922_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthetic_process


id: CL:1924
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1924_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferases_group_1


id: CL:1926
description: O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1926_O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferases_group_1


id: CL:1928
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1928_Mixed,_incl._Polyketide_sugar_unit_biosynthesis,_and_NAD_binding_domain_of_6-phosphogluconate_dehydrogenase

description:
  Mixed, incl. Polyketide sugar unit biosynthesis, and NAD binding domain of 6-phosphogluconate dehydrogenase


id: CL:1946
description: Mixed, incl. Asparagine metabolic process, and Glycosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1946_Mixed,_incl._Asparagine_metabolic_process,_and_Glycosylation


id: CL:195
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:195_Structural_constituent_of_ribosome


id: CL:1963
description: Mixed, incl. KR domain, and Lipopolysaccharide core region metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1963_Mixed,_incl._KR_domain,_and_Lipopolysaccharide_core_region_metabolic_process


id: CL:1989
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:1989_Mixed,_incl._Transcription_cis-regulatory_region_binding,_and_Aminopeptidase_I_zinc_metalloprotease_(M18)

description:
  Mixed, incl. Transcription cis-regulatory region binding, and Aminopeptidase I zinc metalloprotease (M18)


id: CL:2001
description: Mixed, incl. Poly A polymerase head domain, and Aspartic-type peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2001_Mixed,_incl._Poly_A_polymerase_head_domain,_and_Aspartic-type_peptidase_activity


id: CL:2015
description: Mixed, incl. Ferric iron binding, and NADPH-dependent FMN reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2015_Mixed,_incl._Ferric_iron_binding,_and_NADPH-dependent_FMN_reductase


id: CL:2027
description: Mixed, incl. Flagellar assembly, and Signaling
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2027_Mixed,_incl._Flagellar_assembly,_and_Signaling


id: CL:2029
description: Flagellar assembly, and Signaling
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2029_Flagellar_assembly,_and_Signaling


id: CL:2031
description: Flagellar assembly, and Signaling
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2031_Flagellar_assembly,_and_Signaling


id: CL:2033
description: Flagellar assembly, and Signaling
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2033_Flagellar_assembly,_and_Signaling


id: CL:2034
description: Flagellar assembly, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2034_Flagellar_assembly,_and_Bacterial_chemotaxis


id: CL:2035
description: Flagellar assembly, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2035_Flagellar_assembly,_and_Bacterial_chemotaxis


id: CL:2036
description: Flagellar assembly, and Phosphoprotein phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2036_Flagellar_assembly,_and_Phosphoprotein_phosphatase_activity


id: CL:2037
description: Flagellar assembly, and mRNA 5-UTR binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2037_Flagellar_assembly,_and_mRNA_5-UTR_binding


id: CL:2051
description: Bacterial-type flagellum basal body, and Cell projection organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2051_Bacterial-type_flagellum_basal_body,_and_Cell_projection_organization


id: CL:2054
description: Bacterial-type flagellum basal body, and Bacterial flagellum protein export
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2054_Bacterial-type_flagellum_basal_body,_and_Bacterial_flagellum_protein_export


id: CL:2055
description: Bacterial-type flagellum basal body
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2055_Bacterial-type_flagellum_basal_body


id: CL:2057
description: Mixed, incl. Flagella basal body rod protein, and Amidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2057_Mixed,_incl._Flagella_basal_body_rod_protein,_and_Amidase_activity


id: CL:2071
description: Flagellar rotation, and FliG N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2071_Flagellar_rotation,_and_FliG_N-terminal_domain


id: CL:2081
description: Bacterial flagellum protein export, and Cell projection assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2081_Bacterial_flagellum_protein_export,_and_Cell_projection_assembly


id: CL:2135
description: Anti-sigma factor antagonist activity, and Phosphoprotein phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2135_Anti-sigma_factor_antagonist_activity,_and_Phosphoprotein_phosphatase_activity


id: CL:2163
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2163_Taxis,_and_HAMP_(Histidine_kinases,_Adenylyl_cyclases,_Methyl_binding_proteins,_Phosphatases)_domain

description:
  Taxis, and HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain


id: CL:2167
description: Two component signalling adaptor domain, and Molecular transducer activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2167_Two_component_signalling_adaptor_domain,_and_Molecular_transducer_activity


id: CL:217
description: Mixed, incl. UTP metabolic process, and Ribosomal small subunit biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:217_Mixed,_incl._UTP_metabolic_process,_and_Ribosomal_small_subunit_biogenesis


id: CL:2171
description: Two component signalling adaptor domain, and cheY-homologous receiver domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2171_Two_component_signalling_adaptor_domain,_and_cheY-homologous_receiver_domain


id: CL:2204
description: Mixed, incl. Gas transport, and Periplasm
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2204_Mixed,_incl._Gas_transport,_and_Periplasm


id: CL:2213
description: Mixed, incl. Intracellular signal transduction, and Cyclic nucleotide-monophosphate binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2213_Mixed,_incl._Intracellular_signal_transduction,_and_Cyclic_nucleotide-monophosphate_binding_domain


id: CL:2214
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2214_Mixed,_incl._Adenylyl-_/_guanylyl_cyclase,_catalytic_domain,_and_Cyclic_nucleotide-monophosphate_binding_domain

description:
  Mixed, incl. Adenylyl- / guanylyl cyclase, catalytic domain, and Cyclic nucleotide-monophosphate binding domain


id: CL:2216
description: Mixed, incl. Adenylyl- / guanylyl cyclase, catalytic domain, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2216_Mixed,_incl._Adenylyl-_/_guanylyl_cyclase,_catalytic_domain,_and_Diguanylate_cyclase


id: CL:2218
description: Diguanylate cyclase, and Adenylyl- / guanylyl cyclase, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2218_Diguanylate_cyclase,_and_Adenylyl-_/_guanylyl_cyclase,_catalytic_domain


id: CL:2220
description: Diguanylate cyclase, and Phosphoric diester hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2220_Diguanylate_cyclase,_and_Phosphoric_diester_hydrolase_activity


id: CL:2240
description: Cyclic nucleotide metabolic process, and Cyclic nucleotide-monophosphate binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2240_Cyclic_nucleotide_metabolic_process,_and_Cyclic_nucleotide-monophosphate_binding_domain


id: CL:2253
description: Protein serine/threonine kinase activity, and Tetratricopeptide repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2253_Protein_serine/threonine_kinase_activity,_and_Tetratricopeptide_repeats


id: CL:2263
description: Mixed, incl. Phosphorelay signal transduction system, and PAS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2263_Mixed,_incl._Phosphorelay_signal_transduction_system,_and_PAS_domain


id: CL:2265
description: PAS domain, and Bacterial regulatory protein, Fis family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2265_PAS_domain,_and_Bacterial_regulatory_protein,_Fis_family


id: CL:230
description: Mixed, incl. AAA domain, and Maturation of SSU-rRNA
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:230_Mixed,_incl._AAA_domain,_and_Maturation_of_SSU-rRNA


id: CL:2313
description: Mixed, incl. Transglutaminase/protease-like homologues, and Sigma factor
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2313_Mixed,_incl._Transglutaminase/protease-like_homologues,_and_Sigma_factor


id: CL:2331
description: Mixed, incl. Porin activity, and BspA type Leucine rich repeat region (6 copies)
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2331_Mixed,_incl._Porin_activity,_and_BspA_type_Leucine_rich_repeat_region_(6_copies)


id: CL:2332
description: Mixed, incl. Porin activity, and BspA type Leucine rich repeat region (6 copies)
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2332_Mixed,_incl._Porin_activity,_and_BspA_type_Leucine_rich_repeat_region_(6_copies)


id: CL:2334
description: Mixed, incl. Porin activity, and BspA type Leucine rich repeat region (6 copies)
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2334_Mixed,_incl._Porin_activity,_and_BspA_type_Leucine_rich_repeat_region_(6_copies)


id: CL:2335
description: Mixed, incl. Porin activity, and BspA type Leucine rich repeat region (6 copies)
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2335_Mixed,_incl._Porin_activity,_and_BspA_type_Leucine_rich_repeat_region_(6_copies)


id: CL:2337
description: Mixed, incl. BspA type Leucine rich repeat region (6 copies), and Porin activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2337_Mixed,_incl._BspA_type_Leucine_rich_repeat_region_(6_copies),_and_Porin_activity


id: CL:2338
description: Mixed, incl. Porin activity, and Parallel beta-helix repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2338_Mixed,_incl._Porin_activity,_and_Parallel_beta-helix_repeats


id: CL:2340
description: Mixed, incl. Porin activity, and Listeria-Bacteroides repeat domain (List_Bact_rpt)
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2340_Mixed,_incl._Porin_activity,_and_Listeria-Bacteroides_repeat_domain_(List_Bact_rpt)


id: CL:2342
description: Mixed, incl. Listeria-Bacteroides repeat domain (List_Bact_rpt), and Porin activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2342_Mixed,_incl._Listeria-Bacteroides_repeat_domain_(List_Bact_rpt),_and_Porin_activity


id: CL:2344
description: Listeria-Bacteroides repeat domain (List_Bact_rpt), and Porin activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2344_Listeria-Bacteroides_repeat_domain_(List_Bact_rpt),_and_Porin_activity


id: CL:2345
description: Listeria-Bacteroides repeat domain (List_Bact_rpt), and Fibronectin type 3 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2345_Listeria-Bacteroides_repeat_domain_(List_Bact_rpt),_and_Fibronectin_type_3_domain


id: CL:2354
description: Parallel beta-helix repeats, and Porin activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2354_Parallel_beta-helix_repeats,_and_Porin_activity


id: CL:2375
description: OmpA family, and Transglycosylase SLT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2375_OmpA_family,_and_Transglycosylase_SLT_domain


id: CL:2395
description: BspA type Leucine rich repeat region (6 copies), and Leucine-rich repeats, outliers
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2395_BspA_type_Leucine_rich_repeat_region_(6_copies),_and_Leucine-rich_repeats,_outliers


id: CL:2399
description: BspA type Leucine rich repeat region (6 copies)
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2399_BspA_type_Leucine_rich_repeat_region_(6_copies)


id: CL:2424
description: Mixed, incl. GMP metabolic process, and Lytic endotransglycosylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2424_Mixed,_incl._GMP_metabolic_process,_and_Lytic_endotransglycosylase_activity


id: CL:2449
description: Mixed, incl. Galactose metabolism, and Protein of unknown function (DUF3791)
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2449_Mixed,_incl._Galactose_metabolism,_and_Protein_of_unknown_function_(DUF3791)


id: CL:2451
description: Galactose metabolic process, and Glycosyl hydrolases family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2451_Galactose_metabolic_process,_and_Glycosyl_hydrolases_family_2


id: CL:2467
description: Mixed, incl. Protein of unknown function (DUF3791), and Glycosyl hydrolases family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2467_Mixed,_incl._Protein_of_unknown_function_(DUF3791),_and_Glycosyl_hydrolases_family_2


id: CL:2478
description: Mixed, incl. S-adenosylmethionine cycle, and RNA methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2478_Mixed,_incl._S-adenosylmethionine_cycle,_and_RNA_methyltransferase_domain


id: CL:2480
description: S-adenosylmethionine cycle, and RNA methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2480_S-adenosylmethionine_cycle,_and_RNA_methyltransferase_domain


id: CL:2498
description: Mixed, incl. EamA-like transporter family, and Methylthiotransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2498_Mixed,_incl._EamA-like_transporter_family,_and_Methylthiotransferase_activity


id: CL:2509
description: Mixed, incl. Glycerophospholipid metabolism, and Glycine, serine and threonine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2509_Mixed,_incl._Glycerophospholipid_metabolism,_and_Glycine,_serine_and_threonine_metabolism


id: CL:2510
description: Mixed, incl. Glycerophospholipid metabolism, and Glycine, serine and threonine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2510_Mixed,_incl._Glycerophospholipid_metabolism,_and_Glycine,_serine_and_threonine_metabolism


id: CL:2511
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2511_Mixed,_incl._Glycine,_serine_and_threonine_metabolism,_and_CDP-alcohol_phosphatidyltransferase_activity

description:
  Mixed, incl. Glycine, serine and threonine metabolism, and CDP-alcohol phosphatidyltransferase activity


id: CL:2513
description: CDP-alcohol phosphatidyltransferase activity, and Polyol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2513_CDP-alcohol_phosphatidyltransferase_activity,_and_Polyol_metabolic_process


id: CL:2534
description: Potassium ion transport, and Glycerolipid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2534_Potassium_ion_transport,_and_Glycerolipid_biosynthetic_process


id: CL:2550
description: Mixed, incl. Choline/ethanolamine kinase, and Phosphomethylpyrimidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2550_Mixed,_incl._Choline/ethanolamine_kinase,_and_Phosphomethylpyrimidine_kinase


id: CL:2565
description: Mixed, incl. Riboflavin metabolism, and Cellular response to aldehyde
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2565_Mixed,_incl._Riboflavin_metabolism,_and_Cellular_response_to_aldehyde


id: CL:2580
description: Mixed, incl. Tetratricopeptide repeat, and TrkA-N domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2580_Mixed,_incl._Tetratricopeptide_repeat,_and_TrkA-N_domain


id: CL:2583
description: Mixed, incl. Tetratricopeptide repeat, and Cytochrome complex assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2583_Mixed,_incl._Tetratricopeptide_repeat,_and_Cytochrome_complex_assembly


id: CL:2606
description: Mixed, incl. Electron transport chain, and Butanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2606_Mixed,_incl._Electron_transport_chain,_and_Butanoate_metabolism


id: CL:2607
description: Mixed, incl. Translocase, and Electron transfer activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2607_Mixed,_incl._Translocase,_and_Electron_transfer_activity


id: CL:2608
description: Mixed, incl. Translocase, and Electron transfer activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2608_Mixed,_incl._Translocase,_and_Electron_transfer_activity


id: CL:2609
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2609_Mostly_uncharacterized,_incl._RNA_2-O-methyltransferase_activity,_and_Iron-containing_alcohol_dehydrogenase

description:
  Mostly uncharacterized, incl. RNA 2-O-methyltransferase activity, and Iron-containing alcohol dehydrogenase


id: CL:2612
description: Peroxidase activity, and Transmembrane helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2612_Peroxidase_activity,_and_Transmembrane_helix


id: CL:2648
description: Mixed, incl. Ether lipid metabolism, and DegT/DnrJ/EryC1/StrS aminotransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2648_Mixed,_incl._Ether_lipid_metabolism,_and_DegT/DnrJ/EryC1/StrS_aminotransferase_family


id: CL:2664
description: Mixed, incl. Butanoate metabolism, and Purine nucleobase transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2664_Mixed,_incl._Butanoate_metabolism,_and_Purine_nucleobase_transport


id: CL:2667
description: Mixed, incl. Monooxygenase activity, and Iron-containing alcohol dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2667_Mixed,_incl._Monooxygenase_activity,_and_Iron-containing_alcohol_dehydrogenase


id: CL:2682
description: Mixed, incl. CoA hydrolase activity, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2682_Mixed,_incl._CoA_hydrolase_activity,_and_4Fe-4S_binding_domain


id: CL:2691
description: Mixed, incl. Chromosome segregation, and Response to pH
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2691_Mixed,_incl._Chromosome_segregation,_and_Response_to_pH


id: CL:2693
description: Mixed, incl. Response to pH, and Anion-transporting ATPase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2693_Mixed,_incl._Response_to_pH,_and_Anion-transporting_ATPase


id: CL:2705
description: Mixed, incl. Chromosome condensation, and Prohibitin homologues
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2705_Mixed,_incl._Chromosome_condensation,_and_Prohibitin_homologues


id: CL:2718
description: Mixed, incl. Copper ion binding, and Protein complex oligomerization
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2718_Mixed,_incl._Copper_ion_binding,_and_Protein_complex_oligomerization


id: CL:2733
description: Mixed, incl. Aromatic compound catabolic process, and Benzoate degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2733_Mixed,_incl._Aromatic_compound_catabolic_process,_and_Benzoate_degradation


id: CL:2734
description: Mixed, incl. Methylation, and Ubiquinone and other terpenoid-quinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2734_Mixed,_incl._Methylation,_and_Ubiquinone_and_other_terpenoid-quinone_biosynthesis


id: CL:2736
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2736_Mixed,_incl._Ubiquinone_and_other_terpenoid-quinone_biosynthesis,_and_ABC-2_family_transporter_protein

description:
  Mixed, incl. Ubiquinone and other terpenoid-quinone biosynthesis, and ABC-2 family transporter protein


id: CL:2738
description: Mixed, incl. Nodulation protein S (NodS), and ubiE/COQ5 methyltransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2738_Mixed,_incl._Nodulation_protein_S_(NodS),_and_ubiE/COQ5_methyltransferase_family


id: CL:274
description: Ribosomal small subunit biogenesis, and Zinc-ribbon domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:274_Ribosomal_small_subunit_biogenesis,_and_Zinc-ribbon_domain


id: CL:2740
description: ubiE/COQ5 methyltransferase family, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2740_ubiE/COQ5_methyltransferase_family,_and_Methyltransferase_domain


id: CL:2767
description: Mixed, incl. ABC-2 family transporter protein, and Flavodoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2767_Mixed,_incl._ABC-2_family_transporter_protein,_and_Flavodoxin_domain


id: CL:2783
description: Mixed, incl. Protein of unknown function (DUF2281), and Sodium/hydrogen exchanger family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2783_Mixed,_incl._Protein_of_unknown_function_(DUF2281),_and_Sodium/hydrogen_exchanger_family


id: CL:2796
description: Aromatic compound catabolic process, and 2-hydroxyglutaryl-CoA dehydratase, D-component
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2796_Aromatic_compound_catabolic_process,_and_2-hydroxyglutaryl-CoA_dehydratase,_D-component


id: CL:2798
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2798_Aldehyde_oxidase_and_xanthine_dehydrogenase,_a/b_hammerhead_domain,_and_FAD_binding_domain_in_molybdopterin_dehydrogenase

description:
  Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain, and FAD binding domain in molybdopterin dehydrogenase


id: CL:2820
description: Coenzyme A transferase, and 2-hydroxyglutaryl-CoA dehydratase, D-component
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2820_Coenzyme_A_transferase,_and_2-hydroxyglutaryl-CoA_dehydratase,_D-component


id: CL:2840
description: Mixed, incl. Xenobiotic transport, and Glyoxylate and dicarboxylate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2840_Mixed,_incl._Xenobiotic_transport,_and_Glyoxylate_and_dicarboxylate_metabolism


id: CL:2841
description: Mixed, incl. Xenobiotic transport, and Glyoxylate and dicarboxylate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2841_Mixed,_incl._Xenobiotic_transport,_and_Glyoxylate_and_dicarboxylate_metabolism


id: CL:2842
description: Xenobiotic transport, and Phosphonate and phosphinate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2842_Xenobiotic_transport,_and_Phosphonate_and_phosphinate_metabolism


id: CL:2845
description: Xenobiotic transport, and Phosphonate and phosphinate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2845_Xenobiotic_transport,_and_Phosphonate_and_phosphinate_metabolism


id: CL:285
description: Protein export, and This domain is found at the N-terminus of jag proteins.
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:285_Protein_export,_and_This_domain_is_found_at_the_N-terminus_of_jag_proteins.


id: CL:2866
description: Mixed, incl. PLD-like domain, and Modified amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2866_Mixed,_incl._PLD-like_domain,_and_Modified_amino_acid_transport


id: CL:287
description: SRP54-type protein, GTPase domain, and Protein transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:287_SRP54-type_protein,_GTPase_domain,_and_Protein_transporter_activity


id: CL:2878
description: Mixed, incl. Antiporter activity, and DNA transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2878_Mixed,_incl._Antiporter_activity,_and_DNA_transport


id: CL:2880
description: Mixed, incl. DNA transport, and Glyoxalase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2880_Mixed,_incl._DNA_transport,_and_Glyoxalase-like_domain


id: CL:2894
description: Mixed, incl. Protein homodimerization activity, and Potassium ion transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2894_Mixed,_incl._Protein_homodimerization_activity,_and_Potassium_ion_transmembrane_transport


id: CL:2905
description: Mixed, incl. Sodium ion transport, and PQQ-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2905_Mixed,_incl._Sodium_ion_transport,_and_PQQ-like_domain


id: CL:2921
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2921_Mixed,_incl._L-glutamate_import,_and_D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD_binding_domain

description:
  Mixed, incl. L-glutamate import, and D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain


id: CL:2930
description: Mixed, incl. Threonine/Serine exporter, ThrE, and NlpC/P60 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2930_Mixed,_incl._Threonine/Serine_exporter,_ThrE,_and_NlpC/P60_family


id: CL:2942
description: ABC transporters, and Hypothetical bacterial integral membrane protein (Trep_Strep)
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2942_ABC_transporters,_and_Hypothetical_bacterial_integral_membrane_protein_(Trep_Strep)


id: CL:2943
description: ABC transporters, and Hypothetical bacterial integral membrane protein (Trep_Strep)
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2943_ABC_transporters,_and_Hypothetical_bacterial_integral_membrane_protein_(Trep_Strep)


id: CL:2944
description: ABC transporters, and Hypothetical bacterial integral membrane protein (Trep_Strep)
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2944_ABC_transporters,_and_Hypothetical_bacterial_integral_membrane_protein_(Trep_Strep)


id: CL:2945
description: ABC transporters, and Hypothetical bacterial integral membrane protein (Trep_Strep)
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2945_ABC_transporters,_and_Hypothetical_bacterial_integral_membrane_protein_(Trep_Strep)


id: CL:2946
description: ABC transporters, and Hypothetical bacterial integral membrane protein (Trep_Strep)
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2946_ABC_transporters,_and_Hypothetical_bacterial_integral_membrane_protein_(Trep_Strep)


id: CL:2947
description: ABC transporters, and Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2947_ABC_transporters,_and_Prosthetic_group_metabolic_process


id: CL:2951
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2951_Mixed,_incl._Binding-protein-dependent_transport_system_inner_membrane_component,_and_Bacterial_extracellular_solute-binding_protein

description:
  Mixed, incl. Binding-protein-dependent transport system inner membrane component, and Bacterial extracellular solute-binding protein


id: CL:2952
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2952_Mixed,_incl._Binding-protein-dependent_transport_system_inner_membrane_component,_and_Peptide_transport

description:
  Mixed, incl. Binding-protein-dependent transport system inner membrane component, and Peptide transport


id: CL:2954
description: Peptide transport, and Bacterial extracellular solute-binding proteins, family 5 Middle
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2954_Peptide_transport,_and_Bacterial_extracellular_solute-binding_proteins,_family_5_Middle


id: CL:2955
description: Peptide transport, and Bacterial extracellular solute-binding proteins, family 5 Middle
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2955_Peptide_transport,_and_Bacterial_extracellular_solute-binding_proteins,_family_5_Middle


id: CL:2957
description: Peptide transport, and N-terminal TM domain of oligopeptide transport permease C
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2957_Peptide_transport,_and_N-terminal_TM_domain_of_oligopeptide_transport_permease_C


id: CL:2967
description: Peptide transport, and Bacterial extracellular solute-binding proteins, family 5 Middle
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2967_Peptide_transport,_and_Bacterial_extracellular_solute-binding_proteins,_family_5_Middle


id: CL:2976
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2976_Oligopeptide/dipeptide_transporter,_C-terminal_region,_and_N-terminal_TM_domain_of_oligopeptide_transport_permease_C

description:
  Oligopeptide/dipeptide transporter, C-terminal region, and N-terminal TM domain of oligopeptide transport permease C


id: CL:2991
description: Mixed, incl. Polyamine transport, and Organic cation transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:2991_Mixed,_incl._Polyamine_transport,_and_Organic_cation_transport


id: CL:3008
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3008_Binding-protein-dependent_transport_system_inner_membrane_component,_and_Bacterial_extracellular_solute-binding_protein

description:
  Binding-protein-dependent transport system inner membrane component, and Bacterial extracellular solute-binding protein


id: CL:3009
description: ABC-type maltose transporter activity, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3009_ABC-type_maltose_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein


id: CL:301
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:301_Mixed,_incl._This_domain_is_found_at_the_N-terminus_of_jag_proteins.,_and_Endoribonuclease_activity,_producing_5-phosphomonoesters

description:
  Mixed, incl. This domain is found at the N-terminus of jag proteins., and Endoribonuclease activity, producing 5-phosphomonoesters


id: CL:3011
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3011_Mixed,_incl._ABC-type_maltose_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein

description:
  Mixed, incl. ABC-type maltose transporter activity, and Bacterial extracellular solute-binding protein


id: CL:3013
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3013_Mixed,_incl._ABC-type_maltose_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein

description:
  Mixed, incl. ABC-type maltose transporter activity, and Bacterial extracellular solute-binding protein


id: CL:3045
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3045_Bacterial_extracellular_solute-binding_protein,_and_Binding-protein-dependent_transport_system_inner_membrane_component

description:
  Bacterial extracellular solute-binding protein, and Binding-protein-dependent transport system inner membrane component


id: CL:3058
description: Carbohydrate transport, and Branched-chain amino acid transport system / permease component
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3058_Carbohydrate_transport,_and_Branched-chain_amino_acid_transport_system_/_permease_component


id: CL:3060
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3060_Periplasmic_binding_protein_domain,_and_Branched-chain_amino_acid_transport_system_/_permease_component

description:
  Periplasmic binding protein domain, and Branched-chain amino acid transport system / permease component


id: CL:3075
description: Branched-chain amino acid transport system / permease component, and ABC transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3075_Branched-chain_amino_acid_transport_system_/_permease_component,_and_ABC_transporter


id: CL:3085
description: Mixed, incl. Zinc ion transport, and ATP-binding cassette (ABC) transporter complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3085_Mixed,_incl._Zinc_ion_transport,_and_ATP-binding_cassette_(ABC)_transporter_complex


id: CL:3087
description: Mixed, incl. Zinc ion transport, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3087_Mixed,_incl._Zinc_ion_transport,_and_ABC-2_family_transporter_protein


id: CL:3090
description: Zinc ion transport, and Zinc-uptake complex component A periplasmic
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3090_Zinc_ion_transport,_and_Zinc-uptake_complex_component_A_periplasmic


id: CL:310
description: Mixed, incl. RF-1 domain, and Protein methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:310_Mixed,_incl._RF-1_domain,_and_Protein_methyltransferase_activity


id: CL:3111
description: Mixed, incl. TRAM domain, and Flavodoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3111_Mixed,_incl._TRAM_domain,_and_Flavodoxin_domain


id: CL:3127
description: Prosthetic group metabolic process, and Molybdate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3127_Prosthetic_group_metabolic_process,_and_Molybdate_ion_transport


id: CL:3142
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3142_Mixed,_incl._ABC_transporter_transmembrane_region,_and_Hypothetical_bacterial_integral_membrane_protein_(Trep_Strep)

description:
  Mixed, incl. ABC transporter transmembrane region, and Hypothetical bacterial integral membrane protein (Trep_Strep)


id: CL:3144
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3144_Mixed,_incl._Hypothetical_bacterial_integral_membrane_protein_(Trep_Strep),_and_Cobalt_transport_protein

description:
  Mixed, incl. Hypothetical bacterial integral membrane protein (Trep_Strep), and Cobalt transport protein


id: CL:3145
description: Hypothetical bacterial integral membrane protein (Trep_Strep), and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3145_Hypothetical_bacterial_integral_membrane_protein_(Trep_Strep),_and_Cobalt_transport_protein


id: CL:3147
description: Hypothetical bacterial integral membrane protein (Trep_Strep), and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3147_Hypothetical_bacterial_integral_membrane_protein_(Trep_Strep),_and_Cobalt_transport_protein


id: CL:3149
description: Hypothetical bacterial integral membrane protein (Trep_Strep), and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3149_Hypothetical_bacterial_integral_membrane_protein_(Trep_Strep),_and_Cobalt_transport_protein


id: CL:3151
description: Hypothetical bacterial integral membrane protein (Trep_Strep), and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3151_Hypothetical_bacterial_integral_membrane_protein_(Trep_Strep),_and_Cobalt_transport_protein


id: CL:3195
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3195_Mixed,_incl._Cobalt_transport_protein,_and_Hypothetical_bacterial_integral_membrane_protein_(Trep_Strep)

description:
  Mixed, incl. Cobalt transport protein, and Hypothetical bacterial integral membrane protein (Trep_Strep)


id: CL:320
description: Aminoacyl-tRNA synthetase, and glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:320_Aminoacyl-tRNA_synthetase,_and_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: CL:3208
description: ABC transporter transmembrane region, and Bacterial regulatory proteins, tetR family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3208_ABC_transporter_transmembrane_region,_and_Bacterial_regulatory_proteins,_tetR_family


id: CL:3210
description: ABC transporter transmembrane region, and Amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3210_ABC_transporter_transmembrane_region,_and_Amino_acid_transport


id: CL:3211
description: ABC transporter transmembrane region, and Amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3211_ABC_transporter_transmembrane_region,_and_Amino_acid_transport


id: CL:3213
description: Mtb iron assimilation by chelation, and ATP-binding cassette (ABC) transporter complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3213_Mtb_iron_assimilation_by_chelation,_and_ATP-binding_cassette_(ABC)_transporter_complex


id: CL:3215
description: Mtb iron assimilation by chelation, and ATP-binding cassette (ABC) transporter complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3215_Mtb_iron_assimilation_by_chelation,_and_ATP-binding_cassette_(ABC)_transporter_complex


id: CL:3237
description: Mixed, incl. Amino-acid transport, and Lipoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3237_Mixed,_incl._Amino-acid_transport,_and_Lipoprotein


id: CL:3246
description: Mtb iron assimilation by chelation
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3246_Mtb_iron_assimilation_by_chelation


id: CL:325
description: Anticodon-binding domain of tRNA ligase, and Anticodon binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:325_Anticodon-binding_domain_of_tRNA_ligase,_and_Anticodon_binding_domain


id: CL:3267
description: Mixed, incl. Nitroreductase family, and ABC-type transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3267_Mixed,_incl._Nitroreductase_family,_and_ABC-type_transporter_activity


id: CL:3280
description: Mixed, incl. Putative esterase, and Tetrapyrrole binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3280_Mixed,_incl._Putative_esterase,_and_Tetrapyrrole_binding


id: CL:3298
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3298_ABC-type_phosphonate_transporter_activity,_and_ABC_transporter,_phosphonate,_periplasmic_substrate-binding_protein

description:
  ABC-type phosphonate transporter activity, and ABC transporter, phosphonate, periplasmic substrate-binding protein


id: CL:3315
description: Mixed, incl. Nucleotidyltransferase domain, and Mtb iron assimilation by chelation
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3315_Mixed,_incl._Nucleotidyltransferase_domain,_and_Mtb_iron_assimilation_by_chelation


id: CL:3333
description: Mixed, incl. FtsX-like permease family, and Lipoprotein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3333_Mixed,_incl._FtsX-like_permease_family,_and_Lipoprotein_transport


id: CL:3335
description: Mixed, incl. FtsX-like permease family, and Lipoprotein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3335_Mixed,_incl._FtsX-like_permease_family,_and_Lipoprotein_transport


id: CL:3336
description: Mixed, incl. FtsX-like permease family, and Biotin-lipoyl like
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3336_Mixed,_incl._FtsX-like_permease_family,_and_Biotin-lipoyl_like


id: CL:3337
description: Mixed, incl. FtsX-like permease family, and Lipoprotein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3337_Mixed,_incl._FtsX-like_permease_family,_and_Lipoprotein_transport


id: CL:3338
description: Mixed, incl. FtsX-like permease family, and Biotin-lipoyl like
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3338_Mixed,_incl._FtsX-like_permease_family,_and_Biotin-lipoyl_like


id: CL:3340
description: Mixed, incl. Response to antibiotic, and Iron ion transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3340_Mixed,_incl._Response_to_antibiotic,_and_Iron_ion_transmembrane_transport


id: CL:3357
description: Response to antibiotic, and Biotin-lipoyl like
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3357_Response_to_antibiotic,_and_Biotin-lipoyl_like


id: CL:3373
description: MacB-like periplasmic core domain, and Cell inner membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3373_MacB-like_periplasmic_core_domain,_and_Cell_inner_membrane


id: CL:3383
description: AcrB/AcrD/AcrF family, and Biotin-lipoyl like
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3383_AcrB/AcrD/AcrF_family,_and_Biotin-lipoyl_like


id: CL:3394
description: MMPL family, and Outer membrane lipoprotein-sorting protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3394_MMPL_family,_and_Outer_membrane_lipoprotein-sorting_protein


id: CL:3411
description: Mixed, incl. Amino-acid racemase activity, and CobW/HypB/UreG, nucleotide-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3411_Mixed,_incl._Amino-acid_racemase_activity,_and_CobW/HypB/UreG,_nucleotide-binding_domain


id: CL:3427
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3427_Mixed,_incl._Tripartite_ATP-independent_periplasmic_transporter,_DctM_component,_and_Carbohydrate_binding

description:
  Mixed, incl. Tripartite ATP-independent periplasmic transporter, DctM component, and Carbohydrate binding


id: CL:3428
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3428_Mixed,_incl._Tripartite_ATP-independent_periplasmic_transporter,_DctM_component,_and_Carbohydrate_binding

description:
  Mixed, incl. Tripartite ATP-independent periplasmic transporter, DctM component, and Carbohydrate binding


id: CL:3430
description: Tripartite ATP-independent periplasmic transporter, DctM component, and Carbohydrate binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3430_Tripartite_ATP-independent_periplasmic_transporter,_DctM_component,_and_Carbohydrate_binding


id: CL:344
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:344_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: CL:3447
description: Mixed, incl. Peptidase family U32, and RNA methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3447_Mixed,_incl._Peptidase_family_U32,_and_RNA_methyltransferase_domain


id: CL:3463
description: Mixed, incl. Electron transfer activity, and Gas transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3463_Mixed,_incl._Electron_transfer_activity,_and_Gas_transport


id: CL:3465
description: Mixed, incl. Peptidyl-lysine modification, and Putative tRNA binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3465_Mixed,_incl._Peptidyl-lysine_modification,_and_Putative_tRNA_binding_domain


id: CL:3488
description: Mostly uncharacterized, incl. CAAX-box protein processing, and Nitroreductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3488_Mostly_uncharacterized,_incl._CAAX-box_protein_processing,_and_Nitroreductase_family


id: CL:3489
description: Mixed, incl. CAAX-box protein processing, and Nitroreductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3489_Mixed,_incl._CAAX-box_protein_processing,_and_Nitroreductase_family


id: CL:3491
description: Mixed, incl. Nitroreductase family, and Lipid A metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3491_Mixed,_incl._Nitroreductase_family,_and_Lipid_A_metabolic_process


id: CL:3513
description: Mixed, incl. Nickel cation transport, and Haloacid dehalogenase-like hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3513_Mixed,_incl._Nickel_cation_transport,_and_Haloacid_dehalogenase-like_hydrolase


id: CL:3526
description: Mixed, incl. Deacetylase activity, and Domain of unknown function (DUF2715)
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3526_Mixed,_incl._Deacetylase_activity,_and_Domain_of_unknown_function_(DUF2715)


id: CL:3544
description: Mixed, incl. DNA-binding transcription factor activity, and Sulfatase-modifying factor enzyme 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3544_Mixed,_incl._DNA-binding_transcription_factor_activity,_and_Sulfatase-modifying_factor_enzyme_1


id: CL:3545
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3545_Mixed,_incl._Sulfatase-modifying_factor_enzyme_1,_and_Helix_turn_helix,_arabinose_operon_control_protein

description:
  Mixed, incl. Sulfatase-modifying factor enzyme 1, and Helix_turn_helix, arabinose operon control protein


id: CL:3546
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3546_Mixed,_incl._Sulfatase-modifying_factor_enzyme_1,_and_Helix_turn_helix,_arabinose_operon_control_protein

description:
  Mixed, incl. Sulfatase-modifying factor enzyme 1, and Helix_turn_helix, arabinose operon control protein


id: CL:3547
description: Mixed, incl. Sulfatase-modifying factor enzyme 1, and YmdB-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3547_Mixed,_incl._Sulfatase-modifying_factor_enzyme_1,_and_YmdB-like_protein


id: CL:3550
description: Sulfatase-modifying factor enzyme 1, and Other glycan degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3550_Sulfatase-modifying_factor_enzyme_1,_and_Other_glycan_degradation


id: CL:3572
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3572_Mixed,_incl._Helix_turn_helix,_arabinose_operon_control_protein,_and_Sulfatase-modifying_factor_enzyme_1

description:
  Mixed, incl. Helix_turn_helix, arabinose operon control protein, and Sulfatase-modifying factor enzyme 1


id: CL:3574
description: Helix_turn_helix, arabinose operon control protein, and Flavodoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3574_Helix_turn_helix,_arabinose_operon_control_protein,_and_Flavodoxin


id: CL:358
description: Mixed, incl. FlhB HrpN YscU SpaS Family, and tRNA (guanine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:358_Mixed,_incl._FlhB_HrpN_YscU_SpaS_Family,_and_tRNA_(guanine)_methyltransferase_activity


id: CL:359
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:359_Mixed,_incl._FlhB_HrpN_YscU_SpaS_Family,_and_Metal_dependent_phosphohydrolases_with_conserved_HD_motif.

description:
  Mixed, incl. FlhB HrpN YscU SpaS Family, and Metal dependent phosphohydrolases with conserved HD motif.


id: CL:3595
description: Mixed, incl. Uracil DNA N-glycosylase activity, and WYL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3595_Mixed,_incl._Uracil_DNA_N-glycosylase_activity,_and_WYL_domain


id: CL:3606
description: Mostly uncharacterized, incl. WYL domain, and Amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3606_Mostly_uncharacterized,_incl._WYL_domain,_and_Amino_acid_transport


id: CL:3607
description: Mixed, incl. WYL domain, and Amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3607_Mixed,_incl._WYL_domain,_and_Amino_acid_transport


id: CL:3608
description: Mixed, incl. WYL domain, and Amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3608_Mixed,_incl._WYL_domain,_and_Amino_acid_transport


id: CL:3609
description: Mixed, incl. HNH nucleases, and DinB superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3609_Mixed,_incl._HNH_nucleases,_and_DinB_superfamily


id: CL:3629
description: Mixed, incl. Alpha/beta hydrolase fold, and E1-E2 ATPase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3629_Mixed,_incl._Alpha/beta_hydrolase_fold,_and_E1-E2_ATPase


id: CL:3641
description: Mixed, incl. HTH domain, and WYL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3641_Mixed,_incl._HTH_domain,_and_WYL_domain


id: CL:3657
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3657_Mixed,_incl._Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond,_and_Glycine_reductase_complex_selenoprotein_A

description:
  Mixed, incl. Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, and Glycine reductase complex selenoprotein A


id: CL:3659
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3659_Mixed,_incl._Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond,_and_Glycine_reductase_complex_selenoprotein_A

description:
  Mixed, incl. Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, and Glycine reductase complex selenoprotein A


id: CL:3662
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3662_Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond,_and_Glycine_reductase_complex_selenoprotein_A

description:
  Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, and Glycine reductase complex selenoprotein A


id: CL:368
description: Mixed, incl. tRNA (guanine) methyltransferase activity, and Ribosome binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:368_Mixed,_incl._tRNA_(guanine)_methyltransferase_activity,_and_Ribosome_binding


id: CL:3691
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3691_Mostly_uncharacterized,_incl._PD-(D/E)XK_nuclease_transposase_sub-family,_and_Listeria_monocytogenes_entry_into_host_cells

description:
  Mostly uncharacterized, incl. PD-(D/E)XK nuclease transposase sub-family, and Listeria monocytogenes entry into host cells


id: CL:3692
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3692_Mixed,_incl._PD-(D/E)XK_nuclease_transposase_sub-family,_and_Listeria_monocytogenes_entry_into_host_cells

description:
  Mixed, incl. PD-(D/E)XK nuclease transposase sub-family, and Listeria monocytogenes entry into host cells


id: CL:3693
description: Mixed, incl. PD-(D/E)XK nuclease transposase sub-family, and Dipeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3693_Mixed,_incl._PD-(D/E)XK_nuclease_transposase_sub-family,_and_Dipeptidase


id: CL:3694
description: Mixed, incl. PD-(D/E)XK nuclease transposase sub-family, and Dipeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3694_Mixed,_incl._PD-(D/E)XK_nuclease_transposase_sub-family,_and_Dipeptidase


id: CL:3697
description: Mixed, incl. PD-(D/E)XK nuclease transposase sub-family, and Protein of unknown function (DUF3990)
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3697_Mixed,_incl._PD-(D/E)XK_nuclease_transposase_sub-family,_and_Protein_of_unknown_function_(DUF3990)


id: CL:3699
description: PD-(D/E)XK nuclease transposase sub-family, and Protein of unknown function (DUF3990)
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3699_PD-(D/E)XK_nuclease_transposase_sub-family,_and_Protein_of_unknown_function_(DUF3990)


id: CL:3711
description: Mixed, incl. Positive regulation of RNA metabolic process, and Kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3711_Mixed,_incl._Positive_regulation_of_RNA_metabolic_process,_and_Kinase_activity


id: CL:3731
description: Mixed, incl. Domain of unknown function (DUF2715), and PD-(D/E)XK nuclease transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3731_Mixed,_incl._Domain_of_unknown_function_(DUF2715),_and_PD-(D/E)XK_nuclease_transposase_sub-family


id: CL:3741
description: Mixed, incl. Cobaltochelatase activity, and 23S rRNA-intervening sequence protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3741_Mixed,_incl._Cobaltochelatase_activity,_and_23S_rRNA-intervening_sequence_protein


id: CL:3742
description: Mixed, incl. Cobaltochelatase activity, and Leucine Rich repeats (2 copies)
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3742_Mixed,_incl._Cobaltochelatase_activity,_and_Leucine_Rich_repeats_(2_copies)


id: CL:3753
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3753_Mixed,_incl._23S_rRNA-intervening_sequence_protein,_and_Listeria_monocytogenes_entry_into_host_cells

description:
  Mixed, incl. 23S rRNA-intervening sequence protein, and Listeria monocytogenes entry into host cells


id: CL:3763
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3763_Mostly_uncharacterized,_incl._Calcineurin-like_phosphoesterase_superfamily_domain,_and_Import_across_plasma_membrane

description:
  Mostly uncharacterized, incl. Calcineurin-like phosphoesterase superfamily domain, and Import across plasma membrane


id: CL:3764
description: Mixed, incl. Cell envelope organization, and Disulfide oxidoreductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3764_Mixed,_incl._Cell_envelope_organization,_and_Disulfide_oxidoreductase_activity


id: CL:377
description: Mixed, incl. Protein folding, and ATP hydrolysis activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:377_Mixed,_incl._Protein_folding,_and_ATP_hydrolysis_activity


id: CL:3775
description: Mixed, incl. Calcineurin-like phosphoesterase superfamily domain, and Import across plasma membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3775_Mixed,_incl._Calcineurin-like_phosphoesterase_superfamily_domain,_and_Import_across_plasma_membrane


id: CL:378
description: Mixed, incl. Protein folding, and ATP hydrolysis activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:378_Mixed,_incl._Protein_folding,_and_ATP_hydrolysis_activity


id: CL:3786
description: TPM domain, and Family of unknown function (DUF5312)
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3786_TPM_domain,_and_Family_of_unknown_function_(DUF5312)


id: CL:379
description: Mixed, incl. Long-chain fatty acid metabolic process, and DEAD-like helicases superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:379_Mixed,_incl._Long-chain_fatty_acid_metabolic_process,_and_DEAD-like_helicases_superfamily


id: CL:380
description: Mixed, incl. Long-chain fatty acid metabolic process, and alanyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:380_Mixed,_incl._Long-chain_fatty_acid_metabolic_process,_and_alanyl-tRNA_aminoacylation


id: CL:3802
description: Mixed, incl. Helix-turn-helix XRE-family like proteins, and Plasmid maintenance
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3802_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Plasmid_maintenance


id: CL:3804
description: Mixed, incl. Potassium ion transport, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3804_Mixed,_incl._Potassium_ion_transport,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:3818
description: Mixed, incl. PmbA/TldA metallopeptidase domain 1, and Plasmid maintenance
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3818_Mixed,_incl._PmbA/TldA_metallopeptidase_domain_1,_and_Plasmid_maintenance


id: CL:3829
description: Mixed, incl. Symporter activity, and Na+/H+ antiporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3829_Mixed,_incl._Symporter_activity,_and_Na+/H+_antiporter_family


id: CL:383
description: Mixed, incl. alanyl-tRNA aminoacylation, and ANK repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:383_Mixed,_incl._alanyl-tRNA_aminoacylation,_and_ANK_repeat


id: CL:3830
description: Symporter activity, and Na+/H+ antiporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3830_Symporter_activity,_and_Na+/H+_antiporter_family


id: CL:3832
description: Mixed, incl. Na+/H+ antiporter family, and Symport
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3832_Mixed,_incl._Na+/H+_antiporter_family,_and_Symport


id: CL:3852
description: Mixed, incl. Tetratricopeptide repeat, and Sodium:neurotransmitter symporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3852_Mixed,_incl._Tetratricopeptide_repeat,_and_Sodium:neurotransmitter_symporter_family


id: CL:3867
description: Mostly uncharacterized, incl. Flagellar filament outer layer protein Flaa, and Permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3867_Mostly_uncharacterized,_incl._Flagellar_filament_outer_layer_protein_Flaa,_and_Permease_family


id: CL:3868
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3868_Mixed,_incl._Flagellar_filament_outer_layer_protein_Flaa,_and_DNA-templated_transcription,_termination

description:
  Mixed, incl. Flagellar filament outer layer protein Flaa, and DNA-templated transcription, termination


id: CL:3870
description: Mixed, incl. DNA-templated transcription, termination, and Guanyl nucleotide binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3870_Mixed,_incl._DNA-templated_transcription,_termination,_and_Guanyl_nucleotide_binding


id: CL:3880
description: Mixed, incl. Flagellar filament outer layer protein Flaa
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3880_Mixed,_incl._Flagellar_filament_outer_layer_protein_Flaa


id: CL:3889
description: Mixed, incl. Permease family, and RNA degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3889_Mixed,_incl._Permease_family,_and_RNA_degradation


id: CL:3905
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3905_Mixed,_incl._BrnA_antitoxin_of_type_II_toxin-antitoxin_system,_and_Ribonuclease_toxin,_BrnT,_of_type_II_toxin-antitoxin_system

description:
  Mixed, incl. BrnA antitoxin of type II toxin-antitoxin system, and Ribonuclease toxin, BrnT, of type II toxin-antitoxin system


id: CL:3907
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3907_Mixed,_incl._BrnA_antitoxin_of_type_II_toxin-antitoxin_system,_and_Ribonuclease_toxin,_BrnT,_of_type_II_toxin-antitoxin_system

description:
  Mixed, incl. BrnA antitoxin of type II toxin-antitoxin system, and Ribonuclease toxin, BrnT, of type II toxin-antitoxin system


id: CL:3908
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3908_Mixed,_incl._BrnA_antitoxin_of_type_II_toxin-antitoxin_system,_and_Ribonuclease_toxin,_BrnT,_of_type_II_toxin-antitoxin_system

description:
  Mixed, incl. BrnA antitoxin of type II toxin-antitoxin system, and Ribonuclease toxin, BrnT, of type II toxin-antitoxin system


id: CL:3909
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3909_BrnA_antitoxin_of_type_II_toxin-antitoxin_system,_and_Ribonuclease_toxin,_BrnT,_of_type_II_toxin-antitoxin_system

description:
  BrnA antitoxin of type II toxin-antitoxin system, and Ribonuclease toxin, BrnT, of type II toxin-antitoxin system


id: CL:3910
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3910_BrnA_antitoxin_of_type_II_toxin-antitoxin_system,_and_Ribonuclease_toxin,_BrnT,_of_type_II_toxin-antitoxin_system

description:
  BrnA antitoxin of type II toxin-antitoxin system, and Ribonuclease toxin, BrnT, of type II toxin-antitoxin system


id: CL:3912
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3912_BrnA_antitoxin_of_type_II_toxin-antitoxin_system,_and_Ribonuclease_toxin,_BrnT,_of_type_II_toxin-antitoxin_system

description:
  BrnA antitoxin of type II toxin-antitoxin system, and Ribonuclease toxin, BrnT, of type II toxin-antitoxin system


id: CL:3932
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3932_Mixed,_incl._Transglutaminase/protease-like_homologues,_and_BrnA_antitoxin_of_type_II_toxin-antitoxin_system

description:
  Mixed, incl. Transglutaminase/protease-like homologues, and BrnA antitoxin of type II toxin-antitoxin system


id: CL:3945
description: Mixed, incl. DNA methylation on cytosine, and BrnA antitoxin of type II toxin-antitoxin system
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3945_Mixed,_incl._DNA_methylation_on_cytosine,_and_BrnA_antitoxin_of_type_II_toxin-antitoxin_system


id: CL:3960
description: Amino sugar and nucleotide sugar metabolism, and Chromate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3960_Amino_sugar_and_nucleotide_sugar_metabolism,_and_Chromate_transport


id: CL:3961
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3961_Mixed,_incl._Glycosyl_hydrolase_family_3_N_terminal_domain,_and_Protein_of_unknown_function_(DUF1343)

description:
  Mixed, incl. Glycosyl hydrolase family 3 N terminal domain, and Protein of unknown function (DUF1343)


id: CL:3963
description: Glycosyl hydrolase family 3 N terminal domain, and Protein of unknown function (DUF1343)
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3963_Glycosyl_hydrolase_family_3_N_terminal_domain,_and_Protein_of_unknown_function_(DUF1343)


id: CL:3982
description: Mixed, incl. Chromate transport, and Acetyltransferase (GNAT) family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:3982_Mixed,_incl._Chromate_transport,_and_Acetyltransferase_(GNAT)_family


id: CL:4008
description: Mixed, incl. Defense response, and Ribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4008_Mixed,_incl._Defense_response,_and_Ribonuclease_activity


id: CL:4009
description: Mixed, incl. Defense response, and DNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4009_Mixed,_incl._Defense_response,_and_DNA_modification


id: CL:4010
description: Mixed, incl. Defense response, and DNA methylation on adenine
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4010_Mixed,_incl._Defense_response,_and_DNA_methylation_on_adenine


id: CL:4011
description: Mixed, incl. Defense response, and DNA methylation on adenine
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4011_Mixed,_incl._Defense_response,_and_DNA_methylation_on_adenine


id: CL:4013
description: Mixed, incl. DNA modification, and Von Willebrand factor (vWF) type A domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4013_Mixed,_incl._DNA_modification,_and_Von_Willebrand_factor_(vWF)_type_A_domain


id: CL:4014
description: Mixed, incl. DNA modification, and Putative DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4014_Mixed,_incl._DNA_modification,_and_Putative_DNA-binding_domain


id: CL:4016
description: DNA modification, and Putative DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4016_DNA_modification,_and_Putative_DNA-binding_domain


id: CL:4018
description: Type I restriction modification DNA specificity domain, and DNA methylation on adenine
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4018_Type_I_restriction_modification_DNA_specificity_domain,_and_DNA_methylation_on_adenine


id: CL:402
description: Mixed, incl. Long-chain fatty acid metabolic process, and UMP salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:402_Mixed,_incl._Long-chain_fatty_acid_metabolic_process,_and_UMP_salvage


id: CL:4020
description: Type I restriction modification DNA specificity domain, and DNA methylation on adenine
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4020_Type_I_restriction_modification_DNA_specificity_domain,_and_DNA_methylation_on_adenine


id: CL:4049
description: Mixed, incl. Site-specific DNA-methyltransferase (adenine-specific) activity, and Subtilase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4049_Mixed,_incl._Site-specific_DNA-methyltransferase_(adenine-specific)_activity,_and_Subtilase_family


id: CL:4077
description: Mixed, incl. Von Willebrand factor (vWF) type A domain, and PLD-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4077_Mixed,_incl._Von_Willebrand_factor_(vWF)_type_A_domain,_and_PLD-like_domain


id: CL:4078
description: Mixed, incl. PLD-like domain, and Eco57I restriction-modification methylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4078_Mixed,_incl._PLD-like_domain,_and_Eco57I_restriction-modification_methylase


id: CL:4091
description: Von Willebrand factor (vWF) type A domain, and Porphyrin and chlorophyll metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4091_Von_Willebrand_factor_(vWF)_type_A_domain,_and_Porphyrin_and_chlorophyll_metabolism


id: CL:4107
description: Response to virus, and DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4107_Response_to_virus,_and_DDE_transposase_sub-family


id: CL:4129
description: Mixed, incl. CRISPR-associated (Cas) DxTHG family, and DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4129_Mixed,_incl._CRISPR-associated_(Cas)_DxTHG_family,_and_DDE_transposase_sub-family


id: CL:4140
description: Mixed, incl. Domain of unknown function (DUF4143), and Transcription cis-regulatory region binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4140_Mixed,_incl._Domain_of_unknown_function_(DUF4143),_and_Transcription_cis-regulatory_region_binding


id: CL:4142
description: Domain of unknown function (DUF4143), and Two-component system
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4142_Domain_of_unknown_function_(DUF4143),_and_Two-component_system


id: CL:4161
description: Mixed, incl. Fic/DOC family, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4161_Mixed,_incl._Fic/DOC_family,_and_AAA_domain


id: CL:4164
description: Mixed, incl. AAA domain, and Winged helix-turn-helix DNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4164_Mixed,_incl._AAA_domain,_and_Winged_helix-turn-helix_DNA-binding


id: CL:417
description: RNA helicase activity, and FtsJ-like methyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:417_RNA_helicase_activity,_and_FtsJ-like_methyltransferase


id: CL:4190
description: Mixed, incl. PIN domain, and Ribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4190_Mixed,_incl._PIN_domain,_and_Ribonuclease_activity


id: CL:4192
description: Sulfur metabolism, and DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4192_Sulfur_metabolism,_and_DNA_binding


id: CL:4194
description: Sulfur metabolism, and DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4194_Sulfur_metabolism,_and_DNA_binding


id: CL:4226
description: Mixed, incl. Folate biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4226_Mixed,_incl._Folate_biosynthesis


id: CL:4241
description: Mixed, incl. Protein of unknown function (DUF2281), and Sucrose-6F-phosphate phosphohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4241_Mixed,_incl._Protein_of_unknown_function_(DUF2281),_and_Sucrose-6F-phosphate_phosphohydrolase


id: CL:4255
description: Mixed, incl. Toxin-antitoxin complex, and Antitoxin Phd_YefM, type II toxin-antitoxin system
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4255_Mixed,_incl._Toxin-antitoxin_complex,_and_Antitoxin_Phd_YefM,_type_II_toxin-antitoxin_system


id: CL:4256
description: Mixed, incl. Toxin-antitoxin complex, and Antitoxin Phd_YefM, type II toxin-antitoxin system
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4256_Mixed,_incl._Toxin-antitoxin_complex,_and_Antitoxin_Phd_YefM,_type_II_toxin-antitoxin_system


id: CL:4257
description: Mixed, incl. Toxin-antitoxin complex, and Antitoxin Phd_YefM, type II toxin-antitoxin system
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4257_Mixed,_incl._Toxin-antitoxin_complex,_and_Antitoxin_Phd_YefM,_type_II_toxin-antitoxin_system


id: CL:4259
description: Toxin-antitoxin complex, and Antitoxin Phd_YefM, type II toxin-antitoxin system
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4259_Toxin-antitoxin_complex,_and_Antitoxin_Phd_YefM,_type_II_toxin-antitoxin_system


id: CL:4260
description: Toxin-antitoxin complex, and Antitoxin Phd_YefM, type II toxin-antitoxin system
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4260_Toxin-antitoxin_complex,_and_Antitoxin_Phd_YefM,_type_II_toxin-antitoxin_system


id: CL:4267
description: RelB antitoxin, and RelE toxin of RelE / RelB toxin-antitoxin system
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4267_RelB_antitoxin,_and_RelE_toxin_of_RelE_/_RelB_toxin-antitoxin_system


id: CL:4288
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4288_HicA_toxin_of_bacterial_toxin-antitoxin,_,_and_HicB_like_antitoxin_of_bacterial_toxin-antitoxin_system

description:
  HicA toxin of bacterial toxin-antitoxin, , and HicB_like antitoxin of bacterial toxin-antitoxin system


id: CL:430
description: Protein folding, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:430_Protein_folding,_and_ATP-dependent_peptidase_activity


id: CL:4313
description: Mixed, incl. Antitoxin Phd_YefM, type II toxin-antitoxin system, and Regulation of growth
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4313_Mixed,_incl._Antitoxin_Phd_YefM,_type_II_toxin-antitoxin_system,_and_Regulation_of_growth


id: CL:432
description: Protein folding, and Hsp70 protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:432_Protein_folding,_and_Hsp70_protein


id: CL:4332
description: Mixed, incl. DNA-methyltransferase activity, and Flavodoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4332_Mixed,_incl._DNA-methyltransferase_activity,_and_Flavodoxin


id: CL:4333
description: Mixed, incl. D12 class N6 adenine-specific DNA methyltransferase, and Flavodoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4333_Mixed,_incl._D12_class_N6_adenine-specific_DNA_methyltransferase,_and_Flavodoxin


id: CL:4335
description: D12 class N6 adenine-specific DNA methyltransferase, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4335_D12_class_N6_adenine-specific_DNA_methyltransferase,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:4347
description: Mixed, incl. Flavodoxin, and Regulation of signaling
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4347_Mixed,_incl._Flavodoxin,_and_Regulation_of_signaling


id: CL:435
description: Stress response, and Protein folding chaperone
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:435_Stress_response,_and_Protein_folding_chaperone


id: CL:4356
description: C-5 cytosine-specific DNA methylase, and Mismatch repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4356_C-5_cytosine-specific_DNA_methylase,_and_Mismatch_repair


id: CL:4365
description: Mixed, incl. NlpC/P60 family, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4365_Mixed,_incl._NlpC/P60_family,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:4376
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4376_Mostly_uncharacterized,_incl._Domain_of_unknown_function_(DUF4261),_and_Metal_dependent_phosphohydrolases_with_conserved_HD_motif.

description:
  Mostly uncharacterized, incl. Domain of unknown function (DUF4261), and Metal dependent phosphohydrolases with conserved HD motif.


id: CL:4377
description: Mostly uncharacterized, incl. Cellular polysaccharide metabolic process, and DNA transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4377_Mostly_uncharacterized,_incl._Cellular_polysaccharide_metabolic_process,_and_DNA_transport


id: CL:4378
description: Mostly uncharacterized, incl. Cell aggregation, and Gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4378_Mostly_uncharacterized,_incl._Cell_aggregation,_and_Gated_channel_activity


id: CL:4379
description: Mostly uncharacterized, incl. Cell aggregation, and Gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4379_Mostly_uncharacterized,_incl._Cell_aggregation,_and_Gated_channel_activity


id: CL:4381
description: Mostly uncharacterized, incl. Cell aggregation, and Folate biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4381_Mostly_uncharacterized,_incl._Cell_aggregation,_and_Folate_biosynthesis


id: CL:4393
description: Mixed, incl. Cell aggregation, and Folate biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4393_Mixed,_incl._Cell_aggregation,_and_Folate_biosynthesis


id: CL:4410
description: Mixed, incl. Gated channel activity, and Pyruvate phosphate dikinase, AMP/ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4410_Mixed,_incl._Gated_channel_activity,_and_Pyruvate_phosphate_dikinase,_AMP/ATP-binding_domain


id: CL:4443
description: Mixed, incl. DNA transport, and dGTP catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4443_Mixed,_incl._DNA_transport,_and_dGTP_catabolic_process


id: CL:4458
description: Mixed, incl. Domain of unknown function (DUF4261), and mRNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4458_Mixed,_incl._Domain_of_unknown_function_(DUF4261),_and_mRNA_catabolic_process


id: CL:446
description: Mixed, incl. Hsp70 protein, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:446_Mixed,_incl._Hsp70_protein,_and_Tetratricopeptide_repeat


id: CL:4480
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4480_Mixed,_incl._Branched-chain_amino_acid_transport_system_/_permease_component,_and_Periplasmic_binding_protein_domain

description:
  Mixed, incl. Branched-chain amino acid transport system / permease component, and Periplasmic binding protein domain


id: CL:4482
description: Branched-chain amino acid transport system / permease component, and ABC transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4482_Branched-chain_amino_acid_transport_system_/_permease_component,_and_ABC_transporter


id: CL:4505
description: Mixed, incl. Nucleotidyltransferase domain, and Magnesium chelatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4505_Mixed,_incl._Nucleotidyltransferase_domain,_and_Magnesium_chelatase_activity


id: CL:4536
description: Transposase activity, and Histidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4536_Transposase_activity,_and_Histidine_metabolism


id: CL:4628
description: Mixed, incl. Domain of unknown function (DUF2715), and Zinc-ribbon domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:4628_Mixed,_incl._Domain_of_unknown_function_(DUF2715),_and_Zinc-ribbon_domain


id: CL:465
description: Peptidase complex, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:465_Peptidase_complex,_and_ATP-dependent_peptidase_activity


id: CL:477
description: Mixed, incl. Prohibitin homologues, and Peptidase family U32
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:477_Mixed,_incl._Prohibitin_homologues,_and_Peptidase_family_U32


id: CL:479
description: Mixed, incl. Enzyme inhibitor activity, and Phosphopantetheine
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:479_Mixed,_incl._Enzyme_inhibitor_activity,_and_Phosphopantetheine


id: CL:497
description: Mixed, incl. Riboflavin metabolism, and TatD related DNase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:497_Mixed,_incl._Riboflavin_metabolism,_and_TatD_related_DNase


id: CL:500
description: Riboflavin metabolism, and Septation
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:500_Riboflavin_metabolism,_and_Septation


id: CL:513
description: Region found in RelA / SpoT proteins, and rRNA (guanine-N7)-methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:513_Region_found_in_RelA_/_SpoT_proteins,_and_rRNA_(guanine-N7)-methylation


id: CL:527
description: Pyridine nucleotide metabolic process, and Sir2 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:527_Pyridine_nucleotide_metabolic_process,_and_Sir2_family


id: CL:529
description: Pyridine nucleotide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:529_Pyridine_nucleotide_metabolic_process


id: CL:544
description: NAD biosynthetic process, and Ribosome assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:544_NAD_biosynthetic_process,_and_Ribosome_assembly


id: CL:555
description: Proton-transporting two-sector ATPase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:555_Proton-transporting_two-sector_ATPase_complex


id: CL:572
description: Catalytic activity, acting on DNA, and Replisome
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:572_Catalytic_activity,_acting_on_DNA,_and_Replisome


id: CL:574
description: Catalytic activity, acting on DNA, and Replisome
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:574_Catalytic_activity,_acting_on_DNA,_and_Replisome


id: CL:576
description: Catalytic activity, acting on DNA, and Regulation of DNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:576_Catalytic_activity,_acting_on_DNA,_and_Regulation_of_DNA_metabolic_process


id: CL:577
description: Catalytic activity, acting on DNA, and Regulation of DNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:577_Catalytic_activity,_acting_on_DNA,_and_Regulation_of_DNA_metabolic_process


id: CL:578
description: Mixed, incl. DNA repair, and DNA-directed DNA polymerase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:578_Mixed,_incl._DNA_repair,_and_DNA-directed_DNA_polymerase_activity


id: CL:580
description: Mixed, incl. Mismatch repair, and Bacterial nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:580_Mixed,_incl._Mismatch_repair,_and_Bacterial_nucleoid


id: CL:581
description: Mismatch repair, and Helicase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:581_Mismatch_repair,_and_Helicase_activity


id: CL:582
description: ATP-dependent activity, acting on DNA, and 3-5 exonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:582_ATP-dependent_activity,_acting_on_DNA,_and_3-5_exonuclease_activity


id: CL:585
description: UvrD/REP helicase N-terminal domain, and Bacterial nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:585_UvrD/REP_helicase_N-terminal_domain,_and_Bacterial_nucleoid


id: CL:610
description: DNA-directed DNA polymerase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:610_DNA-directed_DNA_polymerase_activity


id: CL:620
description: Regulation of DNA repair, and Damaged DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:620_Regulation_of_DNA_repair,_and_Damaged_DNA_binding


id: CL:636
description: Nucleotide-excision repair, and DNA recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:636_Nucleotide-excision_repair,_and_DNA_recombination


id: CL:659
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:659_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity,_and_AAA_domain


id: CL:672
description: Mixed, incl. Horizontal gene transfer, and Nucleotide diphosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:672_Mixed,_incl._Horizontal_gene_transfer,_and_Nucleotide_diphosphatase_activity


id: CL:688
description: Primosome complex, and Single-strand binding protein family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:688_Primosome_complex,_and_Single-strand_binding_protein_family


id: CL:692
description: Primosome, and Single-strand binding protein family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:692_Primosome,_and_Single-strand_binding_protein_family


id: CL:723
description: Base-excision repair, and Endonuclease/Exonuclease/phosphatase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:723_Base-excision_repair,_and_Endonuclease/Exonuclease/phosphatase_family


id: CL:734
description: Pyrimidine metabolism, and Purine nucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:734_Pyrimidine_metabolism,_and_Purine_nucleoside_monophosphate_metabolic_process


id: CL:735
description: Pyrimidine metabolism, and Purine nucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:735_Pyrimidine_metabolism,_and_Purine_nucleoside_monophosphate_metabolic_process


id: CL:737
description: Mixed, incl. Nucleoside monophosphate metabolic process, and Nucleoside metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:737_Mixed,_incl._Nucleoside_monophosphate_metabolic_process,_and_Nucleoside_metabolic_process


id: CL:738
description: Mixed, incl. Nucleoside metabolic process, and Potassium
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:738_Mixed,_incl._Nucleoside_metabolic_process,_and_Potassium


id: CL:740
description: Mixed, incl. Nucleoside metabolic process, and 5-nucleotidase, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:740_Mixed,_incl._Nucleoside_metabolic_process,_and_5-nucleotidase,_C-terminal_domain


id: CL:742
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:742_Mixed,_incl._Purine_nucleoside_monophosphate_metabolic_process,_and_5-nucleotidase,_C-terminal_domain

description:
  Mixed, incl. Purine nucleoside monophosphate metabolic process, and 5-nucleotidase, C-terminal domain


id: CL:744
description: Purine nucleoside monophosphate metabolic process, and 5-nucleotidase, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:744_Purine_nucleoside_monophosphate_metabolic_process,_and_5-nucleotidase,_C-terminal_domain


id: CL:780
description: Deoxyribose phosphate biosynthetic process, and Nucleoside kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:780_Deoxyribose_phosphate_biosynthetic_process,_and_Nucleoside_kinase_activity


id: CL:810
description: Pyrimidine nucleotide biosynthetic process, and Permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:810_Pyrimidine_nucleotide_biosynthetic_process,_and_Permease_family


id: CL:813
description: De novo UMP biosynthetic process, and 2Fe-2S
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:813_De_novo_UMP_biosynthetic_process,_and_2Fe-2S


id: CL:842
description: Mixed, incl. Microbial metabolism in diverse environments, and Fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:842_Mixed,_incl._Microbial_metabolism_in_diverse_environments,_and_Fatty_acid_metabolic_process


id: CL:843
description: Mixed, incl. Carbon metabolism, and Fatty acid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:843_Mixed,_incl._Carbon_metabolism,_and_Fatty_acid_biosynthesis


id: CL:844
description: Mixed, incl. Fatty acid metabolism, and Pyruvate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:844_Mixed,_incl._Fatty_acid_metabolism,_and_Pyruvate_metabolism


id: CL:846
description: Fatty acid metabolism, and Pyruvate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:846_Fatty_acid_metabolism,_and_Pyruvate_metabolism


id: CL:847
description: Mixed, incl. Fatty acid metabolism, and acetyl-CoA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:847_Mixed,_incl._Fatty_acid_metabolism,_and_acetyl-CoA_metabolic_process


id: CL:849
description: Fatty acid biosynthesis, and Oxaloacetate decarboxylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:849_Fatty_acid_biosynthesis,_and_Oxaloacetate_decarboxylase_activity


id: CL:850
description: Biotin metabolism, and 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:850_Biotin_metabolism,_and_3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III


id: CL:872
description: acetyl-CoA carboxylase complex, and Oxaloacetate decarboxylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:872_acetyl-CoA_carboxylase_complex,_and_Oxaloacetate_decarboxylase_activity


id: CL:888
description: Mixed, incl. Lipid oxidation, and acetyl-CoA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:888_Mixed,_incl._Lipid_oxidation,_and_acetyl-CoA_metabolic_process


id: CL:890
description: Acyl-CoA dehydrogenase, middle domain, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:890_Acyl-CoA_dehydrogenase,_middle_domain,_and_Electron_transfer_flavoprotein_domain


id: CL:904
description: acetyl-CoA metabolic process, and Iron-containing alcohol dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:904_acetyl-CoA_metabolic_process,_and_Iron-containing_alcohol_dehydrogenase


id: CL:91
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:91_Ribosome,_and_Regulation_of_translation


id: CL:92
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:92_Ribosome,_and_Translation_regulator_activity


id: CL:921
description: Mixed, incl. Citrate cycle (TCA cycle), and Lactate dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:921_Mixed,_incl._Citrate_cycle_(TCA_cycle),_and_Lactate_dehydrogenase_activity


id: CL:923
description: Citrate cycle (TCA cycle), and Lactate dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:923_Citrate_cycle_(TCA_cycle),_and_Lactate_dehydrogenase_activity


id: CL:925
description: Pyruvate, phosphate dikinase activity, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:925_Pyruvate,_phosphate_dikinase_activity,_and_4Fe-4S_binding_domain


id: CL:93
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:93_Ribosome,_and_Translation_regulator_activity


id: CL:95
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:95_Ribosome,_and_Translation_regulator_activity


id: CL:960
description: Mixed, incl. Phosphopantetheine, and Glycolipid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:960_Mixed,_incl._Phosphopantetheine,_and_Glycolipid_metabolic_process


id: CL:962
description: Mixed, incl. Phosphopantetheine, and Glycolipid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:962_Mixed,_incl._Phosphopantetheine,_and_Glycolipid_metabolic_process


id: CL:985
description: Mixed, incl. Carbohydrate catabolic process, and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:985_Mixed,_incl._Carbohydrate_catabolic_process,_and_Pentose_phosphate_pathway


id: CL:987
description: Glycolytic process, and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:987_Glycolytic_process,_and_Pentose_phosphate_pathway


id: CL:989
description: Glycolytic process, and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:989_Glycolytic_process,_and_Pentose_phosphate_pathway


id: CL:99
description: Ribosomal protein, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:99_Ribosomal_protein,_and_Translation_regulator_activity


id: CL:996
description: Glycolysis, and Thiamine pyrophosphate
name:
  Local Network Cluster (STRING).STRING_v12.0_1125700_STRINGid_CL:996_Glycolysis,_and_Thiamine_pyrophosphate


id: GO:0000462
description: Maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
memo: https://amigo.geneontology.org/amigo/term/GO:0000462
golevel: 11
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0000462_Maturation_of_SSU-rRNA_from_tricistronic_rRNA_transcript_(SSU-rRNA,_5.8S_rRNA,_LSU-rRNA)


id: GO:0000701
description: Purine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0000701
golevel: 7
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0000701_Purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 10
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000724
description: Double-strand break repair via homologous recombination
memo: https://amigo.geneontology.org/amigo/term/GO:0000724
golevel: 9
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0000724_Double-strand_break_repair_via_homologous_recombination


id: GO:0000977
description: RNA polymerase II transcription regulatory region sequence-specific DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0000977
golevel: 8
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0000977_RNA_polymerase_II_transcription_regulatory_region_sequence-specific_DNA_binding


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 6
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 5
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
golevel: 6
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004365
description: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004365
golevel: 6
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0004365_glyceraldehyde-3-phosphate_dehydrogenase_(NAD+)_(phosphorylating)_activity


id: GO:0004471
description: Malate dehydrogenase (decarboxylating) (NAD+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004471
golevel: 6
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0004471_Malate_dehydrogenase_(decarboxylating)_(NAD+)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
golevel: 5
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 6
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0005477
description: Pyruvate secondary active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005477
golevel: 7
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0005477_Pyruvate_secondary_active_transmembrane_transporter_activity


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 11
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0008028
description: Monocarboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008028
golevel: 5
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0008028_Monocarboxylic_acid_transmembrane_transporter_activity


id: GO:0008263
description: Pyrimidine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008263
golevel: 7
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0008263_Pyrimidine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
golevel: 5
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
golevel: 6
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008893
description: guanosine-3,5-bis(diphosphate) 3-diphosphatase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008893
golevel: 6
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0008893_guanosine-3,5-bis(diphosphate)_3-diphosphatase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0008965
description: Phosphoenolpyruvate-protein phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008965
golevel: 5
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0008965_Phosphoenolpyruvate-protein_phosphotransferase_activity


id: GO:0008982
description: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008982
golevel: 5
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0008982_protein-N(PI)-phosphohistidine-sugar_phosphotransferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 6
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 9
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009139
description: Pyrimidine nucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009139
golevel: 9
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0009139_Pyrimidine_nucleoside_diphosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 9
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009157
description: Deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009157
golevel: 9
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0009157_Deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 10
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 9
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 10
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 9
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 10
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 9
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 10
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 10
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 9
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 10
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009210
description: Pyrimidine ribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009210
golevel: 10
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0009210_Pyrimidine_ribonucleoside_triphosphate_catabolic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 9
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 10
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 10
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 9
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 10
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009401
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system
memo: https://amigo.geneontology.org/amigo/term/GO:0009401
golevel: 8
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0009401_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 6
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 6
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 6
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0010604
description: Positive regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010604
golevel: 5
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0010604_Positive_regulation_of_macromolecule_metabolic_process


id: GO:0010605
description: Negative regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010605
golevel: 5
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0010605_Negative_regulation_of_macromolecule_metabolic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
golevel: 3
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015355
description: Secondary active monocarboxylate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015355
golevel: 6
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0015355_Secondary_active_monocarboxylate_transmembrane_transporter_activity


id: GO:0015451
description: Decarboxylation-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015451
golevel: 5
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0015451_Decarboxylation-driven_active_transmembrane_transporter_activity


id: GO:0015658
description: Branched-chain amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015658
golevel: 6
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0015658_Branched-chain_amino_acid_transmembrane_transporter_activity


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016705
memo: https://amigo.geneontology.org/amigo/term/GO:0016705
golevel: 3
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016705_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: GO:0016712
memo: https://amigo.geneontology.org/amigo/term/GO:0016712
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016712_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_reduced_flavin_or_flavoprotein_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen


id: GO:0016716
memo: https://amigo.geneontology.org/amigo/term/GO:0016716
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016716_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_another_compound_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016773
description: Phosphotransferase activity, alcohol group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016773
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016773_Phosphotransferase_activity,_alcohol_group_as_acceptor


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
golevel: 6
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016837
description: Carbon-oxygen lyase activity, acting on polysaccharides
memo: https://amigo.geneontology.org/amigo/term/GO:0016837
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016837_Carbon-oxygen_lyase_activity,_acting_on_polysaccharides


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016889
description: Endodeoxyribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016889
golevel: 7
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016889_Endodeoxyribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 7
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
golevel: 6
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016894
memo: https://amigo.geneontology.org/amigo/term/GO:0016894
golevel: 6
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016894_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_3-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 7
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016896
description: Exoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016896
golevel: 7
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016896_Exoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016901
memo: https://amigo.geneontology.org/amigo/term/GO:0016901
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016901_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0018339
description: peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid
memo: https://amigo.geneontology.org/amigo/term/GO:0018339
golevel: 8
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0018339_peptidyl-L-beta-methylthioaspartic_acid_biosynthetic_process_from_peptidyl-aspartic_acid


id: GO:0019171
description: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019171
golevel: 5
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0019171_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 5
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019243
description: Methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
memo: https://amigo.geneontology.org/amigo/term/GO:0019243
golevel: 9
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0019243_Methylglyoxal_catabolic_process_to_D-lactate_via_S-lactoyl-glutathione


id: GO:0019288
description: Isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019288
golevel: 8
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0019288_Isopentenyl_diphosphate_biosynthetic_process,_methylerythritol_4-phosphate_pathway


id: GO:0019556
description: Histidine catabolic process to glutamate and formamide
memo: https://amigo.geneontology.org/amigo/term/GO:0019556
golevel: 10
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0019556_Histidine_catabolic_process_to_glutamate_and_formamide


id: GO:0019829
description: ATPase-coupled cation transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019829
golevel: 6
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0019829_ATPase-coupled_cation_transmembrane_transporter_activity


id: GO:0030435
description: Sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0030435
golevel: 3
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0030435_Sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0030604
description: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030604
golevel: 5
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0030604_1-deoxy-D-xylulose-5-phosphate_reductoisomerase_activity


id: GO:0031250
description: Anaerobic ribonucleoside-triphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031250
golevel: 4
name:
  GOCC.STRING_v12.0_1125700_STRINGid_GO:0031250_Anaerobic_ribonucleoside-triphosphate_reductase_complex


id: GO:0031554
description: Regulation of DNA-templated transcription, termination
memo: https://amigo.geneontology.org/amigo/term/GO:0031554
golevel: 11
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0031554_Regulation_of_DNA-templated_transcription,_termination


id: GO:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
golevel: 3
name:
  GOCC.STRING_v12.0_1125700_STRINGid_GO:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GO:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
golevel: 3
name:
  GOCC.STRING_v12.0_1125700_STRINGid_GO:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GO:0033818
description: Beta-ketoacyl-acyl-carrier-protein synthase III activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033818
golevel: 5
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0033818_Beta-ketoacyl-acyl-carrier-protein_synthase_III_activity


id: GO:0034249
description: Negative regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034249
golevel: 6
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0034249_Negative_regulation_of_cellular_amide_metabolic_process


id: GO:0034250
description: Positive regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034250
golevel: 6
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0034250_Positive_regulation_of_cellular_amide_metabolic_process


id: GO:0034404
description: Nucleobase-containing small molecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034404
golevel: 6
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0034404_Nucleobase-containing_small_molecule_biosynthetic_process


id: GO:0034656
description: Nucleobase-containing small molecule catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034656
golevel: 6
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0034656_Nucleobase-containing_small_molecule_catabolic_process


id: GO:0035592
description: Establishment of protein localization to extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0035592
golevel: 6
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0035592_Establishment_of_protein_localization_to_extracellular_region


id: GO:0036361
description: Racemase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0036361
golevel: 5
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0036361_Racemase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0042083
description: 5,10-methylenetetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042083
golevel: 5
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0042083_5,10-methylenetetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042777
description: Proton motive force-driven plasma membrane ATP synthesis
memo: https://amigo.geneontology.org/amigo/term/GO:0042777
golevel: 13
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0042777_Proton_motive_force-driven_plasma_membrane_ATP_synthesis


id: GO:0043225
description: ATPase-coupled inorganic anion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043225
golevel: 6
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0043225_ATPase-coupled_inorganic_anion_transmembrane_transporter_activity


id: GO:0043811
description: Phosphate:acyl-[acyl carrier protein] acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043811
golevel: 5
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0043811_Phosphate:acyl-[acyl_carrier_protein]_acyltransferase_activity


id: GO:0043891
description: glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043891
golevel: 5
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0043891_glyceraldehyde-3-phosphate_dehydrogenase_(NAD(P)+)_(phosphorylating)_activity


id: GO:0044419
description: Biological process involved in interspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0044419
golevel: 1
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0044419_Biological_process_involved_in_interspecies_interaction_between_organisms


id: GO:0044769
description: ATPase activity, coupled to transmembrane movement of ions, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0044769
golevel: 7
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0044769_ATPase_activity,_coupled_to_transmembrane_movement_of_ions,_rotational_mechanism


id: GO:0045934
description: Negative regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045934
golevel: 6
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0045934_Negative_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0045935
description: Positive regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045935
golevel: 6
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0045935_Positive_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0046429
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046429
golevel: 5
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0046429_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_synthase_activity


id: GO:0046538
description: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046538
golevel: 6
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0046538_2,3-bisphosphoglycerate-dependent_phosphoglycerate_mutase_activity


id: GO:0046915
description: Transition metal ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046915
golevel: 6
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0046915_Transition_metal_ion_transmembrane_transporter_activity


id: GO:0046933
description: Proton-transporting ATP synthase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046933
golevel: 8
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0046933_Proton-transporting_ATP_synthase_activity,_rotational_mechanism


id: GO:0046961
description: Proton-transporting ATPase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046961
golevel: 8
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0046961_Proton-transporting_ATPase_activity,_rotational_mechanism


id: GO:0046992
description: Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond
memo: https://amigo.geneontology.org/amigo/term/GO:0046992
golevel: 3
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0046992_Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond


id: GO:0047334
description: diphosphate-fructose-6-phosphate 1-phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047334
golevel: 7
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0047334_diphosphate-fructose-6-phosphate_1-phosphotransferase_activity


id: GO:0047451
description: 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047451
golevel: 6
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0047451_3-hydroxyoctanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0047480
description: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047480
golevel: 5
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0047480_UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine_ligase_activity


id: GO:0048646
description: Anatomical structure formation involved in morphogenesis
memo: https://amigo.geneontology.org/amigo/term/GO:0048646
golevel: 2
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0048646_Anatomical_structure_formation_involved_in_morphogenesis


id: GO:0050485
description: Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0050485
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0050485_Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond,_with_a_disulfide_as_acceptor


id: GO:0050511
description: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050511
golevel: 6
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0050511_Undecaprenyldiphospho-muramoylpentapeptide_beta-N-acetylglucosaminyltransferase_activity


id: GO:0050515
description: 4-(cytidine 5-diphospho)-2-C-methyl-D-erythritol kinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050515
golevel: 5
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0050515_4-(cytidine_5-diphospho)-2-C-methyl-D-erythritol_kinase_activity


id: GO:0050518
description: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050518
golevel: 6
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0050518_2-C-methyl-D-erythritol_4-phosphate_cytidylyltransferase_activity


id: GO:0050566
description: asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050566
golevel: 5
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0050566_asparaginyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0050567
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050567
golevel: 5
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0050567_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0051003
description: Ligase activity, forming nitrogen-metal bonds, forming coordination complexes
memo: https://amigo.geneontology.org/amigo/term/GO:0051003
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0051003_Ligase_activity,_forming_nitrogen-metal_bonds,_forming_coordination_complexes


id: GO:0051075
description: S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051075
golevel: 3
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0051075_S-adenosylmethionine:tRNA_ribosyltransferase-isomerase_activity


id: GO:0051172
description: Negative regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051172
golevel: 5
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0051172_Negative_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051173
description: Positive regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051173
golevel: 5
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0051173_Positive_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051703
description: Biological process involved in intraspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0051703
golevel: 1
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0051703_Biological_process_involved_in_intraspecies_interaction_between_organisms


id: GO:0051745
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051745
golevel: 5
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0051745_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_reductase_activity


id: GO:0051991
memo: https://amigo.geneontology.org/amigo/term/GO:0051991
golevel: 6
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0051991_UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol_4-beta-N-acetylglucosaminlytransferase_activity

description:
  UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity


id: GO:0051992
memo: https://amigo.geneontology.org/amigo/term/GO:0051992
golevel: 5
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0051992_UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate_transferase_activity

description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity


id: GO:0052592
description: Oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0052592
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0052592_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_with_an_iron-sulfur_protein_as_acceptor


id: GO:0052890
description: Oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0052890
golevel: 4
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0052890_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_with_a_flavin_as_acceptor


id: GO:0052908
description: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052908
golevel: 9
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0052908_16S_rRNA_(adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase_activity


id: GO:0055086
description: Nucleobase-containing small molecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0055086
golevel: 3
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0055086_Nucleobase-containing_small_molecule_metabolic_process


id: GO:0061504
description: Cyclic threonylcarbamoyladenosine biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0061504
golevel: 11
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0061504_Cyclic_threonylcarbamoyladenosine_biosynthetic_process


id: GO:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
golevel: 4
name:
  GOCC.STRING_v12.0_1125700_STRINGid_GO:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GO:0061712
description: tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase
memo: https://amigo.geneontology.org/amigo/term/GO:0061712
golevel: 6
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0061712_tRNA_(N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase


id: GO:0070647
description: Protein modification by small protein conjugation or removal
memo: https://amigo.geneontology.org/amigo/term/GO:0070647
golevel: 6
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0070647_Protein_modification_by_small_protein_conjugation_or_removal


id: GO:0071951
description: Conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
memo: https://amigo.geneontology.org/amigo/term/GO:0071951
golevel: 12
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0071951_Conversion_of_methionyl-tRNA_to_N-formyl-methionyl-tRNA


id: GO:0072349
description: Modified amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0072349
golevel: 3
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0072349_Modified_amino_acid_transmembrane_transporter_activity


id: GO:0072599
description: Establishment of protein localization to endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0072599
golevel: 7
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0072599_Establishment_of_protein_localization_to_endoplasmic_reticulum


id: GO:0097174
description: 1,6-anhydro-N-acetyl-beta-muramic acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0097174
golevel: 7
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0097174_1,6-anhydro-N-acetyl-beta-muramic_acid_metabolic_process


id: GO:0097175
description: 1,6-anhydro-N-acetyl-beta-muramic acid catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0097175
golevel: 8
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0097175_1,6-anhydro-N-acetyl-beta-muramic_acid_catabolic_process


id: GO:0097588
description: Archaeal or bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:0097588
golevel: 4
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0097588_Archaeal_or_bacterial-type_flagellum-dependent_cell_motility


id: GO:0106074
description: aminoacyl-tRNA metabolism involved in translational fidelity
memo: https://amigo.geneontology.org/amigo/term/GO:0106074
golevel: 9
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:0106074_aminoacyl-tRNA_metabolism_involved_in_translational_fidelity


id: GO:0140078
description: Class I DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0140078
golevel: 5
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:0140078_Class_I_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:1901505
description: Carbohydrate derivative transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901505
golevel: 3
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:1901505_Carbohydrate_derivative_transmembrane_transporter_activity


id: GO:1901618
description: Organic hydroxy compound transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901618
golevel: 3
name:
  GOMF.STRING_v12.0_1125700_STRINGid_GO:1901618_Organic_hydroxy_compound_transmembrane_transporter_activity


id: GO:1901800
description: Positive regulation of proteasomal protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1901800
golevel: 9
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:1901800_Positive_regulation_of_proteasomal_protein_catabolic_process


id: GO:1903050
description: Regulation of proteolysis involved in protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1903050
golevel: 7
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:1903050_Regulation_of_proteolysis_involved_in_protein_catabolic_process


id: GO:1903052
description: Positive regulation of proteolysis involved in protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1903052
golevel: 8
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:1903052_Positive_regulation_of_proteolysis_involved_in_protein_catabolic_process


id: GO:1903507
description: Negative regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903507
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:1903507_Negative_regulation_of_nucleic_acid-templated_transcription


id: GO:1903508
description: Positive regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903508
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:1903508_Positive_regulation_of_nucleic_acid-templated_transcription


id: GO:2000112
description: Regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000112
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:2000112_Regulation_of_cellular_macromolecule_biosynthetic_process


id: GO:2000113
description: Negative regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000113
name:
  GOBP.STRING_v12.0_1125700_STRINGid_GO:2000113_Negative_regulation_of_cellular_macromolecule_biosynthetic_process


id: GOCC:0000015
description: Phosphopyruvate hydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000015
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0000015_Phosphopyruvate_hydratase_complex


id: GOCC:0000131
description: Incipient cellular bud site
memo: https://amigo.geneontology.org/amigo/term/GO:0000131
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0000131_Incipient_cellular_bud_site


id: GOCC:0000221
description: Vacuolar proton-transporting V-type ATPase, V1 domain
memo: https://amigo.geneontology.org/amigo/term/GO:0000221
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0000221_Vacuolar_proton-transporting_V-type_ATPase,_V1_domain


id: GOCC:0000408
description: EKC/KEOPS complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000408
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0000408_EKC/KEOPS_complex


id: GOCC:0000428
description: DNA-directed RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000428
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0000428_DNA-directed_RNA_polymerase_complex


id: GOCC:0000502
description: Proteasome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000502
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0000502_Proteasome_complex


id: GOCC:0000793
description: Condensed chromosome
memo: https://amigo.geneontology.org/amigo/term/GO:0000793
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0000793_Condensed_chromosome


id: GOCC:0000930
description: Gamma-tubulin complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000930
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0000930_Gamma-tubulin_complex


id: GOCC:0000931
description: Gamma-tubulin large complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000931
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0000931_Gamma-tubulin_large_complex


id: GOCC:0005576
description: Extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0005576
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0005576_Extracellular_region


id: GOCC:0005615
description: Extracellular space
memo: https://amigo.geneontology.org/amigo/term/GO:0005615
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0005615_Extracellular_space


id: GOCC:0005740
description: Mitochondrial envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0005740
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0005740_Mitochondrial_envelope


id: GOCC:0005741
description: Mitochondrial outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005741
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0005741_Mitochondrial_outer_membrane


id: GOCC:0005743
description: Mitochondrial inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005743
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0005743_Mitochondrial_inner_membrane


id: GOCC:0005746
description: Mitochondrial respirasome
memo: https://amigo.geneontology.org/amigo/term/GO:0005746
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0005746_Mitochondrial_respirasome


id: GOCC:0005747
description: Mitochondrial respiratory chain complex I
memo: https://amigo.geneontology.org/amigo/term/GO:0005747
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0005747_Mitochondrial_respiratory_chain_complex_I


id: GOCC:0005759
description: Mitochondrial matrix
memo: https://amigo.geneontology.org/amigo/term/GO:0005759
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0005759_Mitochondrial_matrix


id: GOCC:0005774
description: Vacuolar membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005774
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0005774_Vacuolar_membrane


id: GOCC:0005783
description: Endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0005783
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0005783_Endoplasmic_reticulum


id: GOCC:0005788
description: Endoplasmic reticulum lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0005788
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0005788_Endoplasmic_reticulum_lumen


id: GOCC:0005789
description: Endoplasmic reticulum membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005789
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0005789_Endoplasmic_reticulum_membrane


id: GOCC:0005815
description: Microtubule organizing center
memo: https://amigo.geneontology.org/amigo/term/GO:0005815
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0005815_Microtubule_organizing_center


id: GOCC:0005835
description: Fatty acid synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005835
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0005835_Fatty_acid_synthase_complex


id: GOCC:0005839
description: Proteasome core complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005839
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0005839_Proteasome_core_complex


id: GOCC:0005885
description: Arp2/3 protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005885
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0005885_Arp2/3_protein_complex


id: GOCC:0005887
description: Integral component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005887
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0005887_Integral_component_of_plasma_membrane


id: GOCC:0005911
description: Cell-cell junction
memo: https://amigo.geneontology.org/amigo/term/GO:0005911
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0005911_Cell-cell_junction


id: GOCC:0005935
description: Cellular bud neck
memo: https://amigo.geneontology.org/amigo/term/GO:0005935
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0005935_Cellular_bud_neck


id: GOCC:0005945
description: 6-phosphofructokinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005945
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0005945_6-phosphofructokinase_complex


id: GOCC:0005971
description: Ribonucleoside-diphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005971
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0005971_Ribonucleoside-diphosphate_reductase_complex


id: GOCC:0008076
description: Voltage-gated potassium channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0008076
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0008076_Voltage-gated_potassium_channel_complex


id: GOCC:0009279
description: Cell outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009279
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0009279_Cell_outer_membrane


id: GOCC:0009288
description: Bacterial-type flagellum
memo: https://amigo.geneontology.org/amigo/term/GO:0009288
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0009288_Bacterial-type_flagellum


id: GOCC:0009317
description: acetyl-CoA carboxylase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009317
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0009317_acetyl-CoA_carboxylase_complex


id: GOCC:0009318
description: Exodeoxyribonuclease VII complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009318
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0009318_Exodeoxyribonuclease_VII_complex


id: GOCC:0009326
description: Formate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009326
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0009326_Formate_dehydrogenase_complex


id: GOCC:0009328
description: phenylalanine-tRNA ligase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009328
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0009328_phenylalanine-tRNA_ligase_complex


id: GOCC:0009330
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009330
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0009330_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_complex


id: GOCC:0009331
description: glycerol-3-phosphate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009331
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0009331_glycerol-3-phosphate_dehydrogenase_complex


id: GOCC:0009338
description: Exodeoxyribonuclease V complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009338
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0009338_Exodeoxyribonuclease_V_complex


id: GOCC:0009341
description: Beta-galactosidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009341
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0009341_Beta-galactosidase_complex


id: GOCC:0009347
description: Aspartate carbamoyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009347
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0009347_Aspartate_carbamoyltransferase_complex


id: GOCC:0009358
description: Polyphosphate kinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009358
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0009358_Polyphosphate_kinase_complex


id: GOCC:0009360
description: DNA polymerase III complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009360
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0009360_DNA_polymerase_III_complex


id: GOCC:0009366
description: Enterobactin synthetase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009366
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0009366_Enterobactin_synthetase_complex


id: GOCC:0009368
description: Endopeptidase Clp complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009368
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0009368_Endopeptidase_Clp_complex


id: GOCC:0009376
description: HslUV protease complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009376
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0009376_HslUV_protease_complex


id: GOCC:0009379
description: Holliday junction helicase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009379
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0009379_Holliday_junction_helicase_complex


id: GOCC:0009380
description: Excinuclease repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009380
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0009380_Excinuclease_repair_complex


id: GOCC:0009420
description: Bacterial-type flagellum filament
memo: https://amigo.geneontology.org/amigo/term/GO:0009420
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0009420_Bacterial-type_flagellum_filament


id: GOCC:0009421
description: Bacterial-type flagellum filament cap
memo: https://amigo.geneontology.org/amigo/term/GO:0009421
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0009421_Bacterial-type_flagellum_filament_cap


id: GOCC:0009424
description: Bacterial-type flagellum hook
memo: https://amigo.geneontology.org/amigo/term/GO:0009424
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0009424_Bacterial-type_flagellum_hook


id: GOCC:0009425
description: Bacterial-type flagellum basal body
memo: https://amigo.geneontology.org/amigo/term/GO:0009425
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0009425_Bacterial-type_flagellum_basal_body


id: GOCC:0009426
description: Bacterial-type flagellum basal body, distal rod
memo: https://amigo.geneontology.org/amigo/term/GO:0009426
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0009426_Bacterial-type_flagellum_basal_body,_distal_rod


id: GOCC:0009431
description: Bacterial-type flagellum basal body, MS ring
memo: https://amigo.geneontology.org/amigo/term/GO:0009431
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0009431_Bacterial-type_flagellum_basal_body,_MS_ring


id: GOCC:0009570
description: Chloroplast stroma
memo: https://amigo.geneontology.org/amigo/term/GO:0009570
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0009570_Chloroplast_stroma


id: GOCC:0009654
description: Photosystem II oxygen evolving complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009654
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0009654_Photosystem_II_oxygen_evolving_complex


id: GOCC:0009897
description: External side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009897
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0009897_External_side_of_plasma_membrane


id: GOCC:0009898
description: Cytoplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009898
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0009898_Cytoplasmic_side_of_plasma_membrane


id: GOCC:0010170
description: glucose-1-phosphate adenylyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0010170
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0010170_glucose-1-phosphate_adenylyltransferase_complex


id: GOCC:0012505
description: Endomembrane system
memo: https://amigo.geneontology.org/amigo/term/GO:0012505
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0012505_Endomembrane_system


id: GOCC:0015629
description: Actin cytoskeleton
memo: https://amigo.geneontology.org/amigo/term/GO:0015629
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0015629_Actin_cytoskeleton


id: GOCC:0015630
description: Microtubule cytoskeleton
memo: https://amigo.geneontology.org/amigo/term/GO:0015630
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0015630_Microtubule_cytoskeleton


id: GOCC:0015934
description: Large ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0015934
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0015934_Large_ribosomal_subunit


id: GOCC:0015935
description: Small ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0015935
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0015935_Small_ribosomal_subunit


id: GOCC:0016021
description: Integral component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0016021
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0016021_Integral_component_of_membrane


id: GOCC:0016469
description: Proton-transporting two-sector ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016469
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0016469_Proton-transporting_two-sector_ATPase_complex


id: GOCC:0016471
description: Vacuolar proton-transporting V-type ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016471
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0016471_Vacuolar_proton-transporting_V-type_ATPase_complex


id: GOCC:0018995
description: Host cellular component
memo: https://amigo.geneontology.org/amigo/term/GO:0018995
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0018995_Host_cellular_component


id: GOCC:0019008
description: Molybdopterin synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0019008
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0019008_Molybdopterin_synthase_complex


id: GOCC:0019812
description: Type I site-specific deoxyribonuclease complex
memo: https://amigo.geneontology.org/amigo/term/GO:0019812
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0019812_Type_I_site-specific_deoxyribonuclease_complex


id: GOCC:0019866
description: Organelle inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019866
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0019866_Organelle_inner_membrane


id: GOCC:0019897
description: Extrinsic component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019897
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0019897_Extrinsic_component_of_plasma_membrane


id: GOCC:0019898
description: Extrinsic component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019898
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0019898_Extrinsic_component_of_membrane


id: GOCC:0022625
description: Cytosolic large ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0022625
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0022625_Cytosolic_large_ribosomal_subunit


id: GOCC:0022626
description: Cytosolic ribosome
memo: https://amigo.geneontology.org/amigo/term/GO:0022626
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0022626_Cytosolic_ribosome


id: GOCC:0022627
description: Cytosolic small ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0022627
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0022627_Cytosolic_small_ribosomal_subunit


id: GOCC:0030076
description: Light-harvesting complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030076
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0030076_Light-harvesting_complex


id: GOCC:0030077
description: Plasma membrane light-harvesting complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030077
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0030077_Plasma_membrane_light-harvesting_complex


id: GOCC:0030176
description: Integral component of endoplasmic reticulum membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030176
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0030176_Integral_component_of_endoplasmic_reticulum_membrane


id: GOCC:0030257
description: Type III protein secretion system complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030257
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0030257_Type_III_protein_secretion_system_complex


id: GOCC:0030288
description: Outer membrane-bounded periplasmic space
memo: https://amigo.geneontology.org/amigo/term/GO:0030288
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0030288_Outer_membrane-bounded_periplasmic_space


id: GOCC:0030312
description: External encapsulating structure
memo: https://amigo.geneontology.org/amigo/term/GO:0030312
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0030312_External_encapsulating_structure


id: GOCC:0030427
description: Site of polarized growth
memo: https://amigo.geneontology.org/amigo/term/GO:0030427
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0030427_Site_of_polarized_growth


id: GOCC:0030677
description: Ribonuclease P complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030677
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0030677_Ribonuclease_P_complex


id: GOCC:0030694
description: Bacterial-type flagellum basal body, rod
memo: https://amigo.geneontology.org/amigo/term/GO:0030694
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0030694_Bacterial-type_flagellum_basal_body,_rod


id: GOCC:0030700
description: Glycine reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030700
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0030700_Glycine_reductase_complex


id: GOCC:0030880
description: RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030880
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0030880_RNA_polymerase_complex


id: GOCC:0030915
description: Smc5-Smc6 complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030915
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0030915_Smc5-Smc6_complex


id: GOCC:0030956
description: glutamyl-tRNA(Gln) amidotransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030956
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0030956_glutamyl-tRNA(Gln)_amidotransferase_complex


id: GOCC:0030964
description: NADH dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030964
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0030964_NADH_dehydrogenase_complex


id: GOCC:0031012
description: Extracellular matrix
memo: https://amigo.geneontology.org/amigo/term/GO:0031012
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0031012_Extracellular_matrix


id: GOCC:0031090
description: Organelle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031090
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0031090_Organelle_membrane


id: GOCC:0031224
description: Intrinsic component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031224
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0031224_Intrinsic_component_of_membrane


id: GOCC:0031225
description: Anchored component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031225
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0031225_Anchored_component_of_membrane


id: GOCC:0031226
description: Intrinsic component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031226
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0031226_Intrinsic_component_of_plasma_membrane


id: GOCC:0031227
description: Intrinsic component of endoplasmic reticulum membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031227
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0031227_Intrinsic_component_of_endoplasmic_reticulum_membrane


id: GOCC:0031234
description: Extrinsic component of cytoplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031234
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0031234_Extrinsic_component_of_cytoplasmic_side_of_plasma_membrane


id: GOCC:0031250
description: Anaerobic ribonucleoside-triphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031250
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0031250_Anaerobic_ribonucleoside-triphosphate_reductase_complex


id: GOCC:0031300
description: Intrinsic component of organelle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031300
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0031300_Intrinsic_component_of_organelle_membrane


id: GOCC:0031301
description: Integral component of organelle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031301
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0031301_Integral_component_of_organelle_membrane


id: GOCC:0031410
description: Cytoplasmic vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0031410
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0031410_Cytoplasmic_vesicle


id: GOCC:0031469
description: Polyhedral organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0031469
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0031469_Polyhedral_organelle


id: GOCC:0031471
description: Ethanolamine degradation polyhedral organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0031471
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0031471_Ethanolamine_degradation_polyhedral_organelle


id: GOCC:0031515
description: tRNA (m1A) methyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031515
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0031515_tRNA_(m1A)_methyltransferase_complex


id: GOCC:0031522
description: Cell envelope Sec protein transport complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031522
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0031522_Cell_envelope_Sec_protein_transport_complex


id: GOCC:0031597
description: Cytosolic proteasome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031597
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0031597_Cytosolic_proteasome_complex


id: GOCC:0031966
description: Mitochondrial membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031966
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0031966_Mitochondrial_membrane


id: GOCC:0031967
description: Organelle envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0031967
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0031967_Organelle_envelope


id: GOCC:0031968
description: Organelle outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031968
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0031968_Organelle_outer_membrane


id: GOCC:0031974
description: Membrane-enclosed lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0031974
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0031974_Membrane-enclosed_lumen


id: GOCC:0031976
description: Plastid thylakoid
memo: https://amigo.geneontology.org/amigo/term/GO:0031976
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0031976_Plastid_thylakoid


id: GOCC:0031984
description: Organelle subcompartment
memo: https://amigo.geneontology.org/amigo/term/GO:0031984
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0031984_Organelle_subcompartment


id: GOCC:0032153
description: Cell division site
memo: https://amigo.geneontology.org/amigo/term/GO:0032153
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0032153_Cell_division_site


id: GOCC:0032299
description: Ribonuclease H2 complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032299
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0032299_Ribonuclease_H2_complex


id: GOCC:0032300
description: Mismatch repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032300
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0032300_Mismatch_repair_complex


id: GOCC:0032592
description: Integral component of mitochondrial membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0032592
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0032592_Integral_component_of_mitochondrial_membrane


id: GOCC:0032991
description: Protein-containing complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032991
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0032991_Protein-containing_complex


id: GOCC:0032993
description: protein-DNA complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032993
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0032993_protein-DNA_complex


id: GOCC:0033176
description: Proton-transporting V-type ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0033176
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0033176_Proton-transporting_V-type_ATPase_complex


id: GOCC:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GOCC:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GOCC:0033179
description: Proton-transporting V-type ATPase, V0 domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033179
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0033179_Proton-transporting_V-type_ATPase,_V0_domain


id: GOCC:0033180
description: Proton-transporting V-type ATPase, V1 domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033180
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0033180_Proton-transporting_V-type_ATPase,_V1_domain


id: GOCC:0033202
description: DNA helicase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0033202
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0033202_DNA_helicase_complex


id: GOCC:0033573
description: High-affinity iron permease complex
memo: https://amigo.geneontology.org/amigo/term/GO:0033573
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0033573_High-affinity_iron_permease_complex


id: GOCC:0034357
description: Photosynthetic membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0034357
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0034357_Photosynthetic_membrane


id: GOCC:0034702
description: Ion channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034702
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0034702_Ion_channel_complex


id: GOCC:0034703
description: Cation channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034703
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0034703_Cation_channel_complex


id: GOCC:0034705
description: Potassium channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034705
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0034705_Potassium_channel_complex


id: GOCC:0034707
description: Chloride channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034707
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0034707_Chloride_channel_complex


id: GOCC:0034708
description: Methyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034708
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0034708_Methyltransferase_complex


id: GOCC:0035861
description: Site of double-strand break
memo: https://amigo.geneontology.org/amigo/term/GO:0035861
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0035861_Site_of_double-strand_break


id: GOCC:0036125
description: Fatty acid beta-oxidation multienzyme complex
memo: https://amigo.geneontology.org/amigo/term/GO:0036125
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0036125_Fatty_acid_beta-oxidation_multienzyme_complex


id: GOCC:0042175
description: Nuclear outer membrane-endoplasmic reticulum membrane network
memo: https://amigo.geneontology.org/amigo/term/GO:0042175
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0042175_Nuclear_outer_membrane-endoplasmic_reticulum_membrane_network


id: GOCC:0042575
description: DNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0042575
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0042575_DNA_polymerase_complex


id: GOCC:0042597
description: Periplasmic space
memo: https://amigo.geneontology.org/amigo/term/GO:0042597
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0042597_Periplasmic_space


id: GOCC:0042601
description: Endospore-forming forespore
memo: https://amigo.geneontology.org/amigo/term/GO:0042601
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0042601_Endospore-forming_forespore


id: GOCC:0042651
description: Thylakoid membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0042651
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0042651_Thylakoid_membrane


id: GOCC:0042716
description: Plasma membrane-derived chromatophore
memo: https://amigo.geneontology.org/amigo/term/GO:0042716
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0042716_Plasma_membrane-derived_chromatophore


id: GOCC:0042717
description: Plasma membrane-derived chromatophore membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0042717
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0042717_Plasma_membrane-derived_chromatophore_membrane


id: GOCC:0042763
description: Intracellular immature spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042763
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0042763_Intracellular_immature_spore


id: GOCC:0043190
description: ATP-binding cassette (ABC) transporter complex
memo: https://amigo.geneontology.org/amigo/term/GO:0043190
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0043190_ATP-binding_cassette_(ABC)_transporter_complex


id: GOCC:0043227
description: Membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043227
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0043227_Membrane-bounded_organelle


id: GOCC:0043228
description: Non-membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043228
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0043228_Non-membrane-bounded_organelle


id: GOCC:0043229
description: Intracellular organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043229
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0043229_Intracellular_organelle


id: GOCC:0043230
description: Extracellular organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043230
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0043230_Extracellular_organelle


id: GOCC:0043231
description: Intracellular membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043231
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0043231_Intracellular_membrane-bounded_organelle


id: GOCC:0043232
description: Intracellular non-membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043232
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0043232_Intracellular_non-membrane-bounded_organelle


id: GOCC:0043292
description: Contractile fiber
memo: https://amigo.geneontology.org/amigo/term/GO:0043292
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0043292_Contractile_fiber


id: GOCC:0043527
description: tRNA methyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0043527
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0043527_tRNA_methyltransferase_complex


id: GOCC:0043590
description: Bacterial nucleoid
memo: https://amigo.geneontology.org/amigo/term/GO:0043590
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0043590_Bacterial_nucleoid


id: GOCC:0044391
description: Ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0044391
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0044391_Ribosomal_subunit


id: GOCC:0044815
description: DNA packaging complex
memo: https://amigo.geneontology.org/amigo/term/GO:0044815
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0044815_DNA_packaging_complex


id: GOCC:0045259
description: Proton-transporting ATP synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0045259
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0045259_Proton-transporting_ATP_synthase_complex


id: GOCC:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GOCC:0045271
description: Respiratory chain complex I
memo: https://amigo.geneontology.org/amigo/term/GO:0045271
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0045271_Respiratory_chain_complex_I


id: GOCC:0046658
description: Anchored component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0046658
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0046658_Anchored_component_of_plasma_membrane


id: GOCC:0048476
description: Holliday junction resolvase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0048476
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0048476_Holliday_junction_resolvase_complex


id: GOCC:0048500
description: Signal recognition particle
memo: https://amigo.geneontology.org/amigo/term/GO:0048500
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0048500_Signal_recognition_particle


id: GOCC:0055035
description: Plastid thylakoid membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0055035
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0055035_Plastid_thylakoid_membrane


id: GOCC:0055040
description: Periplasmic flagellum
memo: https://amigo.geneontology.org/amigo/term/GO:0055040
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0055040_Periplasmic_flagellum


id: GOCC:0055052
description: ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing
memo: https://amigo.geneontology.org/amigo/term/GO:0055052
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0055052_ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing


id: GOCC:0055120
description: Striated muscle dense body
memo: https://amigo.geneontology.org/amigo/term/GO:0055120
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0055120_Striated_muscle_dense_body


id: GOCC:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GOCC:0065010
description: Extracellular membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0065010
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0065010_Extracellular_membrane-bounded_organelle


id: GOCC:0070013
description: Intracellular organelle lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0070013
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0070013_Intracellular_organelle_lumen


id: GOCC:0070062
description: Extracellular exosome
memo: https://amigo.geneontology.org/amigo/term/GO:0070062
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0070062_Extracellular_exosome


id: GOCC:0070161
description: Anchoring junction
memo: https://amigo.geneontology.org/amigo/term/GO:0070161
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0070161_Anchoring_junction


id: GOCC:0090734
description: Site of DNA damage
memo: https://amigo.geneontology.org/amigo/term/GO:0090734
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0090734_Site_of_DNA_damage


id: GOCC:0097708
description: Intracellular vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0097708
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0097708_Intracellular_vesicle


id: GOCC:0098533
description: ATPase dependent transmembrane transport complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098533
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0098533_ATPase_dependent_transmembrane_transport_complex


id: GOCC:0098561
description: Methyl accepting chemotaxis protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098561
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0098561_Methyl_accepting_chemotaxis_protein_complex


id: GOCC:0098562
description: Cytoplasmic side of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0098562
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0098562_Cytoplasmic_side_of_membrane


id: GOCC:0098573
description: Intrinsic component of mitochondrial membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0098573
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0098573_Intrinsic_component_of_mitochondrial_membrane


id: GOCC:0098588
description: Bounding membrane of organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0098588
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0098588_Bounding_membrane_of_organelle


id: GOCC:0098636
description: Protein complex involved in cell adhesion
memo: https://amigo.geneontology.org/amigo/term/GO:0098636
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0098636_Protein_complex_involved_in_cell_adhesion


id: GOCC:0098796
description: Membrane protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098796
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0098796_Membrane_protein_complex


id: GOCC:0098797
description: Plasma membrane protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098797
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0098797_Plasma_membrane_protein_complex


id: GOCC:0098798
description: Mitochondrial protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098798
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0098798_Mitochondrial_protein_complex


id: GOCC:0098800
description: Inner mitochondrial membrane protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098800
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0098800_Inner_mitochondrial_membrane_protein_complex


id: GOCC:0098802
description: Plasma membrane signaling receptor complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098802
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0098802_Plasma_membrane_signaling_receptor_complex


id: GOCC:0098803
description: Respiratory chain complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098803
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0098803_Respiratory_chain_complex


id: GOCC:0098827
description: Endoplasmic reticulum subcompartment
memo: https://amigo.geneontology.org/amigo/term/GO:0098827
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0098827_Endoplasmic_reticulum_subcompartment


id: GOCC:0099023
description: Vesicle tethering complex
memo: https://amigo.geneontology.org/amigo/term/GO:0099023
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0099023_Vesicle_tethering_complex


id: GOCC:0099080
description: Supramolecular complex
memo: https://amigo.geneontology.org/amigo/term/GO:0099080
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0099080_Supramolecular_complex


id: GOCC:0099081
description: Supramolecular polymer
memo: https://amigo.geneontology.org/amigo/term/GO:0099081
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0099081_Supramolecular_polymer


id: GOCC:0099512
description: Supramolecular fiber
memo: https://amigo.geneontology.org/amigo/term/GO:0099512
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0099512_Supramolecular_fiber


id: GOCC:0099513
description: Polymeric cytoskeletal fiber
memo: https://amigo.geneontology.org/amigo/term/GO:0099513
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0099513_Polymeric_cytoskeletal_fiber


id: GOCC:0106068
description: SUMO ligase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0106068
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0106068_SUMO_ligase_complex


id: GOCC:0110146
description: Magnetosome membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0110146
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0110146_Magnetosome_membrane


id: GOCC:0110165
description: Cellular anatomical entity
memo: https://amigo.geneontology.org/amigo/term/GO:0110165
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:0110165_Cellular_anatomical_entity


id: GOCC:1902494
description: Catalytic complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902494
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:1902494_Catalytic_complex


id: GOCC:1902495
description: Transmembrane transporter complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902495
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:1902495_Transmembrane_transporter_complex


id: GOCC:1902503
description: Adenylyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902503
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:1902503_Adenylyltransferase_complex


id: GOCC:1902555
description: Endoribonuclease complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902555
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:1902555_Endoribonuclease_complex


id: GOCC:1903561
description: Extracellular vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:1903561
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:1903561_Extracellular_vesicle


id: GOCC:1905347
description: Endodeoxyribonuclease complex
memo: https://amigo.geneontology.org/amigo/term/GO:1905347
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:1905347_Endodeoxyribonuclease_complex


id: GOCC:1905348
description: Endonuclease complex
memo: https://amigo.geneontology.org/amigo/term/GO:1905348
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:1905348_Endonuclease_complex


id: GOCC:1905368
description: Peptidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1905368
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:1905368_Peptidase_complex


id: GOCC:1905369
description: Endopeptidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1905369
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:1905369_Endopeptidase_complex


id: GOCC:1905862
description: Ferroxidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1905862
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:1905862_Ferroxidase_complex


id: GOCC:1990065
description: Dxr protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990065
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:1990065_Dxr_protein_complex


id: GOCC:1990077
description: Primosome complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990077
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:1990077_Primosome_complex


id: GOCC:1990204
description: Oxidoreductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990204
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:1990204_Oxidoreductase_complex


id: GOCC:1990221
description: L-cysteine desulfurase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990221
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:1990221_L-cysteine_desulfurase_complex


id: GOCC:1990228
description: Sulfurtransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990228
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:1990228_Sulfurtransferase_complex


id: GOCC:1990229
description: Iron-sulfur cluster assembly complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990229
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:1990229_Iron-sulfur_cluster_assembly_complex


id: GOCC:1990234
description: Transferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990234
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:1990234_Transferase_complex


id: GOCC:1990329
description: IscS-TusA complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990329
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:1990329_IscS-TusA_complex


id: GOCC:1990330
description: IscS-IscU complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990330
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:1990330_IscS-IscU_complex


id: GOCC:1990351
description: Transporter complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990351
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:1990351_Transporter_complex


id: GOCC:1990391
description: DNA repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990391
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:1990391_DNA_repair_complex


id: GOCC:1990904
description: Ribonucleoprotein complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990904
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125700_STRINGid_GOCC:1990904_Ribonucleoprotein_complex


id: KW-1006
description: Bacterial flagellum protein export
name:
  Annotated Keywords (UniProt).STRING_v12.0_1125700_STRINGid_KW-1006_Bacterial_flagellum_protein_export


id: MAP-1222499
description: Latent infection - Other responses of Mtb to phagocytosis
memo: https://reactome.org/content/detail/MAP-1222499
name:
  Reactome Pathways.STRING_v12.0_1125700_STRINGid_MAP-1222499_Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis


id: MAP-166058
description: MyD88:MAL(TIRAP) cascade initiated on plasma membrane
memo: https://reactome.org/content/detail/MAP-166058
name:
  Reactome Pathways.STRING_v12.0_1125700_STRINGid_MAP-166058_MyD88:MAL(TIRAP)_cascade_initiated_on_plasma_membrane


id: MAP-5602358
description: Diseases associated with the TLR signaling cascade
memo: https://reactome.org/content/detail/MAP-5602358
name:
  Reactome Pathways.STRING_v12.0_1125700_STRINGid_MAP-5602358_Diseases_associated_with_the_TLR_signaling_cascade


id: MAP-8876384
description: Listeria monocytogenes entry into host cells
memo: https://reactome.org/content/detail/MAP-8876384
name:
  Reactome Pathways.STRING_v12.0_1125700_STRINGid_MAP-8876384_Listeria_monocytogenes_entry_into_host_cells


id: MAP-9635486
description: Infection with Mycobacterium tuberculosis
memo: https://reactome.org/content/detail/MAP-9635486
name:
  Reactome Pathways.STRING_v12.0_1125700_STRINGid_MAP-9635486_Infection_with_Mycobacterium_tuberculosis


id: MAP-9636383
description: Prevention of phagosomal-lysosomal fusion
memo: https://reactome.org/content/detail/MAP-9636383
name:
  Reactome Pathways.STRING_v12.0_1125700_STRINGid_MAP-9636383_Prevention_of_phagosomal-lysosomal_fusion


id: MAP-983169
description: Class I MHC mediated antigen processing & presentation
memo: https://reactome.org/content/detail/MAP-983169
name:
  Reactome Pathways.STRING_v12.0_1125700_STRINGid_MAP-983169_Class_I_MHC_mediated_antigen_processing_&_presentation


id: PF00006
description: ATP synthase alpha/beta family, nucleotide-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00006
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00006_ATP_synthase_alpha/beta_family,_nucleotide-binding_domain


id: PF00009
description: Elongation factor Tu GTP binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00009
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00009_Elongation_factor_Tu_GTP_binding_domain


id: PF00056
description: Lactate/malate dehydrogenase, NAD binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00056
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00056_Lactate/malate_dehydrogenase,_NAD_binding_domain


id: PF00070
description: Pyridine nucleotide-disulphide oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00070
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00070_Pyridine_nucleotide-disulphide_oxidoreductase


id: PF00078
description: Reverse transcriptase (RNA-dependent DNA polymerase)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00078
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00078_Reverse_transcriptase_(RNA-dependent_DNA_polymerase)


id: PF00109
description: Beta-ketoacyl synthase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00109
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00109_Beta-ketoacyl_synthase,_N-terminal_domain


id: PF00111
description: 2Fe-2S iron-sulfur cluster binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00111
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00111_2Fe-2S_iron-sulfur_cluster_binding_domain


id: PF00126
description: Bacterial regulatory helix-turn-helix protein, lysR family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00126
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00126_Bacterial_regulatory_helix-turn-helix_protein,_lysR_family


id: PF00132
description: Bacterial transferase hexapeptide (six repeats)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00132
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00132_Bacterial_transferase_hexapeptide_(six_repeats)


id: PF00152
description: tRNA synthetases class II (D, K and N)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00152
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00152_tRNA_synthetases_class_II_(D,_K_and_N)_


id: PF00160
description: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00160
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00160_Cyclophilin_type_peptidyl-prolyl_cis-trans_isomerase/CLD


id: PF00185
description: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00185
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00185_Aspartate/ornithine_carbamoyltransferase,_Asp/Orn_binding_domain


id: PF00201
description: UDP-glucoronosyl and UDP-glucosyl transferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00201
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00201_UDP-glucoronosyl_and_UDP-glucosyl_transferase


id: PF00209
description: Sodium:neurotransmitter symporter family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00209
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00209_Sodium:neurotransmitter_symporter_family


id: PF00217
description: ATP:guanido phosphotransferase, C-terminal catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00217
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00217_ATP:guanido_phosphotransferase,_C-terminal_catalytic_domain


id: PF00254
description: FKBP-type peptidyl-prolyl cis-trans isomerase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00254
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00254_FKBP-type_peptidyl-prolyl_cis-trans_isomerase


id: PF00275
description: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00275
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00275_EPSP_synthase_(3-phosphoshikimate_1-carboxyvinyltransferase)


id: PF00300
description: Histidine phosphatase superfamily (branch 1)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00300
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00300_Histidine_phosphatase_superfamily_(branch_1)


id: PF00309
description: Sigma-54 factor, Activator interacting domain (AID)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00309
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00309_Sigma-54_factor,_Activator_interacting_domain_(AID)_


id: PF00317
description: Ribonucleotide reductase, all-alpha domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00317
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00317_Ribonucleotide_reductase,_all-alpha_domain


id: PF00333
description: Ribosomal protein S5, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00333
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00333_Ribosomal_protein_S5,_N-terminal_domain


id: PF00359
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00359
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00359_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system,_EIIA_2


id: PF00370
description: FGGY family of carbohydrate kinases, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00370
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00370_FGGY_family_of_carbohydrate_kinases,_N-terminal_domain


id: PF00383
description: Cytidine and deoxycytidylate deaminase zinc-binding region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00383
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00383_Cytidine_and_deoxycytidylate_deaminase_zinc-binding_region


id: PF00408
description: Phosphoglucomutase/phosphomannomutase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00408
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00408_Phosphoglucomutase/phosphomannomutase,_C-terminal_domain


id: PF00438
description: S-adenosylmethionine synthetase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00438
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00438_S-adenosylmethionine_synthetase,_N-terminal_domain


id: PF00440
description: Bacterial regulatory proteins, tetR family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00440
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00440_Bacterial_regulatory_proteins,_tetR_family


id: PF00456
description: Transketolase, thiamine diphosphate binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00456
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00456_Transketolase,_thiamine_diphosphate_binding_domain


id: PF00486
description: Transcriptional regulatory protein, C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00486
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00486_Transcriptional_regulatory_protein,_C_terminal


id: PF00496
description: Bacterial extracellular solute-binding proteins, family 5 Middle
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00496
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00496_Bacterial_extracellular_solute-binding_proteins,_family_5_Middle


id: PF00528
description: Binding-protein-dependent transport system inner membrane component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00528
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00528_Binding-protein-dependent_transport_system_inner_membrane_component


id: PF00542
description: Ribosomal protein L7/L12 C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00542
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00542_Ribosomal_protein_L7/L12_C-terminal_domain


id: PF00584
description: SecE/Sec61-gamma subunits of protein translocation complex
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00584
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00584_SecE/Sec61-gamma_subunits_of_protein_translocation_complex


id: PF00586
description: AIR synthase related protein, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00586
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00586_AIR_synthase_related_protein,_N-terminal_domain


id: PF00587
description: tRNA synthetase class II core domain (G, H, P, S and T)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00587
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00587_tRNA_synthetase_class_II_core_domain_(G,_H,_P,_S_and_T)


id: PF00590
description: Tetrapyrrole (Corrin/Porphyrin) Methylases
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00590
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00590_Tetrapyrrole_(Corrin/Porphyrin)_Methylases


id: PF00591
description: Glycosyl transferase family, a/b domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00591
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00591_Glycosyl_transferase_family,_a/b_domain


id: PF00669
description: Bacterial flagellin N-terminal helical region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00669
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00669_Bacterial_flagellin_N-terminal_helical_region


id: PF00700
description: Bacterial flagellin C-terminal helical region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00700
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00700_Bacterial_flagellin_C-terminal_helical_region


id: PF00707
description: Translation initiation factor IF-3, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00707
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00707_Translation_initiation_factor_IF-3,_C-terminal_domain


id: PF00725
description: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00725
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00725_3-hydroxyacyl-CoA_dehydrogenase,_C-terminal_domain


id: PF00728
description: Glycosyl hydrolase family 20, catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00728
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00728_Glycosyl_hydrolase_family_20,_catalytic_domain


id: PF00749
description: tRNA synthetases class I (E and Q), catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00749
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00749_tRNA_synthetases_class_I_(E_and_Q),_catalytic_domain


id: PF00763
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00763
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00763_Tetrahydrofolate_dehydrogenase/cyclohydrolase,_catalytic_domain


id: PF00766
description: Electron transfer flavoprotein FAD-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00766
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00766_Electron_transfer_flavoprotein_FAD-binding_domain


id: PF00828
description: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00828
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00828_Ribosomal_proteins_50S-L15,_50S-L18e,_60S-L27A


id: PF00861
description: Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00861
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00861_Ribosomal_L18_of_archaea,_bacteria,_mitoch._and_chloroplast


id: PF00905
description: Penicillin binding protein transpeptidase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00905
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00905_Penicillin_binding_protein_transpeptidase_domain


id: PF00933
description: Glycosyl hydrolase family 3 N terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00933
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00933_Glycosyl_hydrolase_family_3_N_terminal_domain


id: PF00941
description: FAD binding domain in molybdopterin dehydrogenase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00941
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00941_FAD_binding_domain_in_molybdopterin_dehydrogenase


id: PF00984
description: UDP-glucose/GDP-mannose dehydrogenase family, central domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00984
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF00984_UDP-glucose/GDP-mannose_dehydrogenase_family,_central_domain


id: PF01035
description: 6-O-methylguanine DNA methyltransferase, DNA binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01035
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF01035_6-O-methylguanine_DNA_methyltransferase,_DNA_binding_domain


id: PF01041
description: DegT/DnrJ/EryC1/StrS aminotransferase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01041
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF01041_DegT/DnrJ/EryC1/StrS_aminotransferase_family


id: PF01052
description: Type III flagellar switch regulator (C-ring) FliN C-term
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01052
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF01052_Type_III_flagellar_switch_regulator_(C-ring)_FliN_C-term


id: PF01053
description: Cys/Met metabolism PLP-dependent enzyme
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01053
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF01053_Cys/Met_metabolism_PLP-dependent_enzyme


id: PF01128
description: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01128
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF01128_2-C-methyl-D-erythritol_4-phosphate_cytidylyltransferase


id: PF01156
description: Inosine-uridine preferring nucleoside hydrolase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01156
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF01156_Inosine-uridine_preferring_nucleoside_hydrolase


id: PF01161
description: Phosphatidylethanolamine-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01161
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF01161_Phosphatidylethanolamine-binding_protein


id: PF01182
description: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01182
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF01182_Glucosamine-6-phosphate_isomerases/6-phosphogluconolactonase


id: PF01210
description: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01210
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF01210_NAD-dependent_glycerol-3-phosphate_dehydrogenase_N-terminus


id: PF01255
description: Putative undecaprenyl diphosphate synthase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01255
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF01255_Putative_undecaprenyl_diphosphate_synthase


id: PF01258
description: Prokaryotic dksA/traR C4-type zinc finger
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01258
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF01258_Prokaryotic_dksA/traR_C4-type_zinc_finger


id: PF01272
description: Transcription elongation factor, GreA/GreB, C-term
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01272
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF01272_Transcription_elongation_factor,_GreA/GreB,_C-term


id: PF01281
description: Ribosomal protein L9, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01281
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF01281_Ribosomal_protein_L9,_N-terminal_domain


id: PF01288
description: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01288
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF01288_7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase_(HPPK)


id: PF01297
description: Zinc-uptake complex component A periplasmic
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01297
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF01297_Zinc-uptake_complex_component_A_periplasmic


id: PF01325
description: Iron dependent repressor, N-terminal DNA binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01325
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF01325_Iron_dependent_repressor,_N-terminal_DNA_binding_domain


id: PF01326
description: Pyruvate phosphate dikinase, AMP/ATP-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01326
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF01326_Pyruvate_phosphate_dikinase,_AMP/ATP-binding_domain


id: PF01346
description: Domain amino terminal to FKBP-type peptidyl-prolyl isomerase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01346
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF01346_Domain_amino_terminal_to_FKBP-type_peptidyl-prolyl_isomerase


id: PF01370
description: NAD dependent epimerase/dehydratase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01370
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF01370_NAD_dependent_epimerase/dehydratase_family


id: PF01396
description: Topoisomerase DNA binding C4 zinc finger
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01396
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF01396_Topoisomerase_DNA_binding_C4_zinc_finger


id: PF01409
description: tRNA synthetases class II core domain (F)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01409
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF01409_tRNA_synthetases_class_II_core_domain_(F)


id: PF01420
description: Type I restriction modification DNA specificity domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01420
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF01420_Type_I_restriction_modification_DNA_specificity_domain


id: PF01509
description: TruB family pseudouridylate synthase (N terminal domain)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01509
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF01509_TruB_family_pseudouridylate_synthase_(N_terminal_domain)


id: PF01512
description: Respiratory-chain NADH dehydrogenase 51 Kd subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01512
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF01512_Respiratory-chain_NADH_dehydrogenase_51_Kd_subunit


id: PF01547
description: Bacterial extracellular solute-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01547
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF01547_Bacterial_extracellular_solute-binding_protein


id: PF01558
description: Pyruvate ferredoxin/flavodoxin oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01558
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF01558_Pyruvate_ferredoxin/flavodoxin_oxidoreductase


id: PF01637
description: ATPase domain predominantly from Archaea
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01637
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF01637_ATPase_domain_predominantly_from_Archaea


id: PF01648
description: 4-phosphopantetheinyl transferase superfamily
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01648
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF01648_4-phosphopantetheinyl_transferase_superfamily


id: PF01790
description: Prolipoprotein diacylglyceryl transferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01790
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF01790_Prolipoprotein_diacylglyceryl_transferase


id: PF01832
description: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01832
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF01832_Mannosyl-glycoprotein_endo-beta-N-acetylglucosaminidase


id: PF01855
description: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01855
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF01855_Pyruvate_flavodoxin/ferredoxin_oxidoreductase,_thiamine_diP-bdg


id: PF01948
description: Aspartate carbamoyltransferase regulatory chain, allosteric domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01948
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF01948_Aspartate_carbamoyltransferase_regulatory_chain,_allosteric_domain


id: PF02028
description: BCCT, betaine/carnitine/choline family transporter
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02028
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02028_BCCT,_betaine/carnitine/choline_family_transporter


id: PF02049
description: Flagellar hook-basal body complex protein FliE
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02049
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02049_Flagellar_hook-basal_body_complex_protein_FliE


id: PF02075
description: Crossover junction endodeoxyribonuclease RuvC
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02075
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02075_Crossover_junction_endodeoxyribonuclease_RuvC


id: PF02086
description: D12 class N6 adenine-specific DNA methyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02086
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02086_D12_class_N6_adenine-specific_DNA_methyltransferase


id: PF02120
description: Flagellar hook-length control protein FliK
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02120
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02120_Flagellar_hook-length_control_protein_FliK


id: PF02127
description: Aminopeptidase I zinc metalloprotease (M18)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02127
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02127_Aminopeptidase_I_zinc_metalloprotease_(M18)


id: PF02129
description: X-Pro dipeptidyl-peptidase (S15 family)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02129
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02129_X-Pro_dipeptidyl-peptidase_(S15_family)


id: PF02237
description: Biotin protein ligase C terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02237
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02237_Biotin_protein_ligase_C_terminal_domain


id: PF02367
description: Threonylcarbamoyl adenosine biosynthesis protein TsaE
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02367
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02367_Threonylcarbamoyl_adenosine_biosynthesis_protein_TsaE


id: PF02403
description: Seryl-tRNA synthetase N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02403
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02403_Seryl-tRNA_synthetase_N-terminal_domain


id: PF02410
description: Ribosomal silencing factor during starvation
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02410
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02410_Ribosomal_silencing_factor_during_starvation_


id: PF02452
description: PemK-like, MazF-like toxin of type II toxin-antitoxin system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02452
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02452_PemK-like,_MazF-like_toxin_of_type_II_toxin-antitoxin_system


id: PF02465
description: Flagellar hook-associated protein 2 N-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02465
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02465_Flagellar_hook-associated_protein_2_N-terminus


id: PF02482
description: Sigma 54 modulation protein / S30EA ribosomal protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02482
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02482_Sigma_54_modulation_protein_/_S30EA_ribosomal_protein


id: PF02492
description: CobW/HypB/UreG, nucleotide-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02492
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02492_CobW/HypB/UreG,_nucleotide-binding_domain


id: PF02511
description: Thymidylate synthase complementing protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02511
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02511_Thymidylate_synthase_complementing_protein


id: PF02550
description: Acetyl-CoA hydrolase/transferase N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02550
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02550_Acetyl-CoA_hydrolase/transferase_N-terminal_domain


id: PF02604
description: Antitoxin Phd_YefM, type II toxin-antitoxin system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02604
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02604_Antitoxin_Phd_YefM,_type_II_toxin-antitoxin_system


id: PF02616
description: Segregation and condensation protein ScpA
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02616
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02616_Segregation_and_condensation_protein_ScpA


id: PF02639
description: Uncharacterized BCR, YaiI/YqxD family COG1671
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02639
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02639_Uncharacterized_BCR,_YaiI/YqxD_family_COG1671


id: PF02653
description: Branched-chain amino acid transport system / permease component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02653
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02653_Branched-chain_amino_acid_transport_system_/_permease_component


id: PF02670
description: 1-deoxy-D-xylulose 5-phosphate reductoisomerase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02670
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02670_1-deoxy-D-xylulose_5-phosphate_reductoisomerase


id: PF02683
description: Cytochrome C biogenesis protein transmembrane region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02683
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02683_Cytochrome_C_biogenesis_protein_transmembrane_region


id: PF02707
description: Major Outer Sheath Protein N-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02707
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02707_Major_Outer_Sheath_Protein_N-terminal_region


id: PF02722
description: Major Outer Sheath Protein C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02722
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02722_Major_Outer_Sheath_Protein_C-terminal_domain


id: PF02729
description: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02729
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02729_Aspartate/ornithine_carbamoyltransferase,_carbamoyl-P_binding_domain


id: PF02742
description: Iron dependent repressor, metal binding and dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02742
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02742_Iron_dependent_repressor,_metal_binding_and_dimerisation_domain


id: PF02748
description: Aspartate carbamoyltransferase regulatory chain, metal binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02748
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02748_Aspartate_carbamoyltransferase_regulatory_chain,_metal_binding_domain


id: PF02769
description: AIR synthase related protein, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02769
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02769_AIR_synthase_related_protein,_C-terminal_domain


id: PF02771
description: Acyl-CoA dehydrogenase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02771
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02771_Acyl-CoA_dehydrogenase,_N-terminal_domain


id: PF02772
description: S-adenosylmethionine synthetase, central domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02772
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02772_S-adenosylmethionine_synthetase,_central_domain


id: PF02773
description: S-adenosylmethionine synthetase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02773
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02773_S-adenosylmethionine_synthetase,_C-terminal_domain


id: PF02775
description: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02775
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02775_Thiamine_pyrophosphate_enzyme,_C-terminal_TPP_binding_domain


id: PF02782
description: FGGY family of carbohydrate kinases, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02782
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02782_FGGY_family_of_carbohydrate_kinases,_C-terminal_domain


id: PF02786
description: Carbamoyl-phosphate synthase L chain, ATP binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02786
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02786_Carbamoyl-phosphate_synthase_L_chain,_ATP_binding_domain


id: PF02800
description: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02800
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02800_Glyceraldehyde_3-phosphate_dehydrogenase,_C-terminal_domain


id: PF02801
description: Beta-ketoacyl synthase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02801
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02801_Beta-ketoacyl_synthase,_C-terminal_domain


id: PF02812
description: Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02812
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02812_Glu/Leu/Phe/Val_dehydrogenase,_dimerisation_domain


id: PF02826
description: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02826
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02826_D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD_binding_domain


id: PF02836
description: Glycosyl hydrolases family 2, TIM barrel domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02836
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02836_Glycosyl_hydrolases_family_2,_TIM_barrel_domain


id: PF02837
description: Glycosyl hydrolases family 2, sugar binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02837
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02837_Glycosyl_hydrolases_family_2,_sugar_binding_domain


id: PF02852
description: Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02852
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02852_Pyridine_nucleotide-disulphide_oxidoreductase,_dimerisation_domain


id: PF02861
description: Clp amino terminal domain, pathogenicity island component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02861
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02861_Clp_amino_terminal_domain,_pathogenicity_island_component


id: PF02866
description: Lactate/malate dehydrogenase, alpha/beta C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02866
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02866_Lactate/malate_dehydrogenase,_alpha/beta_C-terminal_domain


id: PF02867
description: Ribonucleotide reductase, barrel domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02867
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02867_Ribonucleotide_reductase,_barrel_domain


id: PF02870
description: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02870
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02870_6-O-methylguanine_DNA_methyltransferase,_ribonuclease-like_domain


id: PF02873
description: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02873
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02873_UDP-N-acetylenolpyruvoylglucosamine_reductase,_C-terminal_domain


id: PF02874
description: ATP synthase alpha/beta family, beta-barrel domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02874
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02874_ATP_synthase_alpha/beta_family,_beta-barrel_domain


id: PF02875
description: Mur ligase family, glutamate ligase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02875
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02875_Mur_ligase_family,_glutamate_ligase_domain


id: PF02878
description: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02878
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02878_Phosphoglucomutase/phosphomannomutase,_alpha/beta/alpha_domain_I


id: PF02879
description: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02879
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02879_Phosphoglucomutase/phosphomannomutase,_alpha/beta/alpha_domain_II


id: PF02880
description: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02880
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02880_Phosphoglucomutase/phosphomannomutase,_alpha/beta/alpha_domain_III


id: PF02881
description: SRP54-type protein, helical bundle domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02881
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02881_SRP54-type_protein,_helical_bundle_domain


id: PF02882
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02882
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02882_Tetrahydrofolate_dehydrogenase/cyclohydrolase,_NAD(P)-binding_domain


id: PF02885
description: Glycosyl transferase family, helical bundle domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02885
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02885_Glycosyl_transferase_family,_helical_bundle_domain


id: PF02894
description: Oxidoreductase family, C-terminal alpha/beta domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02894
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02894_Oxidoreductase_family,_C-terminal_alpha/beta_domain


id: PF02896
description: PEP-utilising enzyme, PEP-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02896
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02896_PEP-utilising_enzyme,_PEP-binding_domain


id: PF02903
description: Alpha amylase, N-terminal ig-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02903
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02903_Alpha_amylase,_N-terminal_ig-like_domain


id: PF02922
description: Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02922
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02922_Carbohydrate-binding_module_48_(Isoamylase_N-terminal_domain)


id: PF02954
description: Bacterial regulatory protein, Fis family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02954
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF02954_Bacterial_regulatory_protein,_Fis_family


id: PF03008
description: Archaea bacterial proteins of unknown function
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03008
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF03008_Archaea_bacterial_proteins_of_unknown_function


id: PF03009
description: Glycerophosphoryl diester phosphodiesterase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03009
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF03009_Glycerophosphoryl_diester_phosphodiesterase_family


id: PF03033
description: Glycosyltransferase family 28 N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03033
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF03033_Glycosyltransferase_family_28_N-terminal_domain


id: PF03062
description: MBOAT, membrane-bound O-acyltransferase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03062
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF03062_MBOAT,_membrane-bound_O-acyltransferase_family


id: PF03083
description: Sugar efflux transporter for intercellular exchange
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03083
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF03083_Sugar_efflux_transporter_for_intercellular_exchange


id: PF03099
description: Biotin/lipoate A/B protein ligase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03099
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF03099_Biotin/lipoate_A/B_protein_ligase_family


id: PF03118
description: Bacterial RNA polymerase, alpha chain C terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03118
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF03118_Bacterial_RNA_polymerase,_alpha_chain_C_terminal_domain


id: PF03241
description: 4-hydroxyphenylacetate 3-hydroxylase C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03241
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF03241_4-hydroxyphenylacetate_3-hydroxylase_C_terminal


id: PF03279
description: Bacterial lipid A biosynthesis acyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03279
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF03279_Bacterial_lipid_A_biosynthesis_acyltransferase


id: PF03372
description: Endonuclease/Exonuclease/phosphatase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03372
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF03372_Endonuclease/Exonuclease/phosphatase_family


id: PF03382
description: Mycoplasma protein of unknown function, DUF285
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03382
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF03382_Mycoplasma_protein_of_unknown_function,_DUF285


id: PF03446
description: NAD binding domain of 6-phosphogluconate dehydrogenase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03446
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF03446_NAD_binding_domain_of_6-phosphogluconate_dehydrogenase


id: PF03447
description: Homoserine dehydrogenase, NAD binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03447
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF03447_Homoserine_dehydrogenase,_NAD_binding_domain


id: PF03449
description: Transcription elongation factor, N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03449
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF03449_Transcription_elongation_factor,_N-terminal


id: PF03480
description: Bacterial extracellular solute-binding protein, family 7
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03480
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF03480_Bacterial_extracellular_solute-binding_protein,_family_7


id: PF03544
description: Gram-negative bacterial TonB protein C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03544
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF03544_Gram-negative_bacterial_TonB_protein_C-terminal


id: PF03548
description: Outer membrane lipoprotein carrier protein LolA
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03548
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF03548_Outer_membrane_lipoprotein_carrier_protein_LolA


id: PF03682
description: Uncharacterised protein family (UPF0158)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03682
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF03682_Uncharacterised_protein_family_(UPF0158)


id: PF03692
description: Putative zinc- or iron-chelating domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03692
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF03692_Putative_zinc-_or_iron-chelating_domain


id: PF03717
description: Penicillin-binding Protein dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03717
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF03717_Penicillin-binding_Protein_dimerisation_domain


id: PF03719
description: Ribosomal protein S5, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03719
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF03719_Ribosomal_protein_S5,_C-terminal_domain


id: PF03726
description: Polyribonucleotide nucleotidyltransferase, RNA binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03726
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF03726_Polyribonucleotide_nucleotidyltransferase,_RNA_binding_domain


id: PF03729
description: Short repeat of unknown function (DUF308)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03729
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF03729_Short_repeat_of_unknown_function_(DUF308)


id: PF03748
description: Flagellar basal body-associated protein FliL
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03748
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF03748_Flagellar_basal_body-associated_protein_FliL


id: PF03819
description: MazG nucleotide pyrophosphohydrolase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03819
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF03819_MazG_nucleotide_pyrophosphohydrolase_domain


id: PF03948
description: Ribosomal protein L9, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03948
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF03948_Ribosomal_protein_L9,_C-terminal_domain


id: PF03961
description: Flagellar Assembly Protein A beta solenoid domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03961
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF03961_Flagellar_Assembly_Protein_A_beta_solenoid_domain


id: PF03963
description: Flagellar hook capping protein - N-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03963
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF03963_Flagellar_hook_capping_protein_-_N-terminal_region


id: PF03977
description: Na+-transporting oxaloacetate decarboxylase beta subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03977
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF03977_Na+-transporting_oxaloacetate_decarboxylase_beta_subunit


id: PF03989
description: DNA gyrase C-terminal domain, beta-propeller
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03989
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF03989_DNA_gyrase_C-terminal_domain,_beta-propeller


id: PF04014
description: Antidote-toxin recognition MazE, bacterial antitoxin
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04014
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF04014_Antidote-toxin_recognition_MazE,_bacterial_antitoxin


id: PF04079
description: Segregation and condensation complex subunit ScpB
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04079
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF04079_Segregation_and_condensation_complex_subunit_ScpB


id: PF04095
description: Nicotinate phosphoribosyltransferase (NAPRTase) family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04095
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF04095_Nicotinate_phosphoribosyltransferase_(NAPRTase)_family


id: PF04101
description: Glycosyltransferase family 28 C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04101
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF04101_Glycosyltransferase_family_28_C-terminal_domain


id: PF04140
description: Isoprenylcysteine carboxyl methyltransferase (ICMT) family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04140
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF04140_Isoprenylcysteine_carboxyl_methyltransferase_(ICMT)_family_


id: PF04246
description: Positive regulator of sigma(E), RseC/MucC
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04246
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF04246_Positive_regulator_of_sigma(E),_RseC/MucC


id: PF04277
description: Oxaloacetate decarboxylase, gamma chain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04277
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF04277_Oxaloacetate_decarboxylase,_gamma_chain_


id: PF04313
description: Type I restriction enzyme R protein N terminus (HSDR_N)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04313
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF04313_Type_I_restriction_enzyme_R_protein_N_terminus_(HSDR_N)


id: PF04357
description: TamB, inner membrane protein subunit of TAM complex
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04357
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF04357_TamB,_inner_membrane_protein_subunit_of_TAM_complex


id: PF04365
description: Ribonuclease toxin, BrnT, of type II toxin-antitoxin system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04365
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF04365_Ribonuclease_toxin,_BrnT,_of_type_II_toxin-antitoxin_system


id: PF04620
description: Flagellar filament outer layer protein Flaa
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04620
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF04620_Flagellar_filament_outer_layer_protein_Flaa


id: PF04723
description: Glycine reductase complex selenoprotein A
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04723
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF04723_Glycine_reductase_complex_selenoprotein_A


id: PF04760
description: Translation initiation factor IF-2, N-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04760
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF04760_Translation_initiation_factor_IF-2,_N-terminal_region


id: PF05015
description: RelE-like toxin of type II toxin-antitoxin system HigB
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05015
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF05015_RelE-like_toxin_of_type_II_toxin-antitoxin_system_HigB


id: PF05016
description: ParE toxin of type II toxin-antitoxin system, parDE
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05016
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF05016_ParE_toxin_of_type_II_toxin-antitoxin_system,_parDE


id: PF05198
description: Translation initiation factor IF-3, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05198
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF05198_Translation_initiation_factor_IF-3,_N-terminal_domain


id: PF05362
description: Lon protease (S16) C-terminal proteolytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05362
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF05362_Lon_protease_(S16)_C-terminal_proteolytic_domain


id: PF05525
description: Branched-chain amino acid transport protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05525
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF05525_Branched-chain_amino_acid_transport_protein


id: PF05698
description: Bacterial trigger factor protein (TF) C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05698
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF05698_Bacterial_trigger_factor_protein_(TF)_C-terminus


id: PF05732
description: Firmicute plasmid replication protein (RepL)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05732
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF05732_Firmicute_plasmid_replication_protein_(RepL)


id: PF05973
description: Phage derived protein Gp49-like (DUF891)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05973
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF05973_Phage_derived_protein_Gp49-like_(DUF891)


id: PF06026
description: Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06026
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF06026_Ribose_5-phosphate_isomerase_A_(phosphoriboisomerase_A)


id: PF06050
description: 2-hydroxyglutaryl-CoA dehydratase, D-component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06050
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF06050_2-hydroxyglutaryl-CoA_dehydratase,_D-component_


id: PF06289
description: Flagellar and Swarming motility proteins
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06289
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF06289_Flagellar_and_Swarming_motility_proteins


id: PF06296
description: RelE toxin of RelE / RelB toxin-antitoxin system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06296
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF06296_RelE_toxin_of_RelE_/_RelB_toxin-antitoxin_system


id: PF06429
description: Flagellar basal body rod FlgEFG protein C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06429
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF06429_Flagellar_basal_body_rod_FlgEFG_protein_C-terminal


id: PF06445
description: GyrI-like small molecule binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06445
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF06445_GyrI-like_small_molecule_binding_domain


id: PF06769
description: YoeB-like toxin of bacterial type II toxin-antitoxin system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06769
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF06769_YoeB-like_toxin_of_bacterial_type_II_toxin-antitoxin_system


id: PF06808
description: Tripartite ATP-independent periplasmic transporter, DctM component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06808
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF06808_Tripartite_ATP-independent_periplasmic_transporter,_DctM_component


id: PF06835
description: Lipopolysaccharide-assembly, LptC-related
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06835
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF06835_Lipopolysaccharide-assembly,_LptC-related


id: PF06925
description: Monogalactosyldiacylglycerol (MGDG) synthase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06925
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF06925_Monogalactosyldiacylglycerol_(MGDG)_synthase


id: PF06971
description: Putative DNA-binding protein N-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06971
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF06971_Putative_DNA-binding_protein_N-terminus


id: PF07195
description: Flagellar hook-associated protein 2 C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07195
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF07195_Flagellar_hook-associated_protein_2_C-terminus


id: PF07355
description: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07355
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF07355_Glycine/sarcosine/betaine_reductase_selenoprotein_B_(GRDB)


id: PF07429
description: 4-alpha-L-fucosyltransferase glycosyl transferase group 56
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07429
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF07429_4-alpha-L-fucosyltransferase_glycosyl_transferase_group_56


id: PF07456
description: Heptaprenyl diphosphate synthase component I
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07456
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF07456_Heptaprenyl_diphosphate_synthase_component_I


id: PF07479
description: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07479
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF07479_NAD-dependent_glycerol-3-phosphate_dehydrogenase_C-terminus


id: PF07521
description: Zn-dependent metallo-hydrolase RNA specificity domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07521
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF07521_Zn-dependent_metallo-hydrolase_RNA_specificity_domain


id: PF07669
description: Eco57I restriction-modification methylase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07669
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF07669_Eco57I_restriction-modification_methylase


id: PF07698
description: 7TM receptor with intracellular HD hydrolase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07698
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF07698_7TM_receptor_with_intracellular_HD_hydrolase


id: PF07717
description: Oligonucleotide/oligosaccharide-binding (OB)-fold
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07717
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF07717_Oligonucleotide/oligosaccharide-binding_(OB)-fold


id: PF07733
description: Bacterial DNA polymerase III alpha NTPase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07733
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF07733_Bacterial_DNA_polymerase_III_alpha_NTPase_domain


id: PF07927
description: HicA toxin of bacterial toxin-antitoxin,
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07927
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF07927_HicA_toxin_of_bacterial_toxin-antitoxin,_


id: PF07992
description: Pyridine nucleotide-disulphide oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07992
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF07992_Pyridine_nucleotide-disulphide_oxidoreductase


id: PF08028
description: Acyl-CoA dehydrogenase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08028
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF08028_Acyl-CoA_dehydrogenase,_C-terminal_domain


id: PF08207
description: Elongation factor P (EF-P) KOW-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08207
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF08207_Elongation_factor_P_(EF-P)_KOW-like_domain


id: PF08240
description: Alcohol dehydrogenase GroES-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08240
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF08240_Alcohol_dehydrogenase_GroES-like_domain


id: PF08264
description: Anticodon-binding domain of tRNA ligase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08264
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF08264_Anticodon-binding_domain_of_tRNA_ligase


id: PF08275
description: DNA primase catalytic core, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08275
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF08275_DNA_primase_catalytic_core,_N-terminal_domain


id: PF08352
description: Oligopeptide/dipeptide transporter, C-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08352
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF08352_Oligopeptide/dipeptide_transporter,_C-terminal_region


id: PF08436
description: 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08436
name:
  Protein Domains (Pfam).STRING_v12.0_1125700_STRINGid_PF08436_1-deoxy-D-xylulose_5-phosphate_reductoisomerase_C-terminal_domain


