# geneInfo

ensembl_gene_id: HMPREF1221_00006
symbol: EPF27203.1
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: HMPREF1221_00012
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: HMPREF1221_00017
symbol: EPF27213.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: HMPREF1221_00030
symbol: mtnK
gene_biotype: protein_coding
description:
  5-methylthioribose kinase; Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.


ensembl_gene_id: HMPREF1221_00038
symbol: EPF27233.1
gene_biotype: protein_coding
description:
  Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: HMPREF1221_00046
symbol: atpA
gene_biotype: protein_coding
description:
  Hypothetical protein; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: HMPREF1221_00047
symbol: atpB
gene_biotype: protein_coding
description:
  V-type ATP synthase beta chain 2; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.


ensembl_gene_id: HMPREF1221_00048
symbol: atpD
gene_biotype: protein_coding
description:
  V-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: HMPREF1221_00051
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: HMPREF1221_00074
symbol: ybeY
gene_biotype: protein_coding
description:
  YbeY/UPF0054 family metalloprotein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: HMPREF1221_00079
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: HMPREF1221_00084
symbol: lolD
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.


ensembl_gene_id: HMPREF1221_00096
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: HMPREF1221_00100
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: HMPREF1221_00105
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramyl-tripeptide synthetase; Catalyzes the addition of an amino acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan.


ensembl_gene_id: HMPREF1221_00108
symbol: EPF27303.1
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydrogenase (decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.


ensembl_gene_id: HMPREF1221_00115
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazoleglycerol phosphate synthase, cyclase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: HMPREF1221_00116
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: HMPREF1221_00121
symbol: recA
gene_biotype: protein_coding
description:
  Protein recA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: HMPREF1221_00140
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.


ensembl_gene_id: HMPREF1221_00141
symbol: metG
gene_biotype: protein_coding
description:
  methionine-tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: HMPREF1221_00143
symbol: rnz
gene_biotype: protein_coding
description:
  Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.


ensembl_gene_id: HMPREF1221_00161
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: HMPREF1221_00201
symbol: ruvC
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: HMPREF1221_00202
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: HMPREF1221_00203
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction ATP-dependent DNA helicase ruvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: HMPREF1221_00204
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: HMPREF1221_00205
symbol: ispE
gene_biotype: protein_coding
description:
  4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: HMPREF1221_00208
symbol: rplY
gene_biotype: protein_coding
description:
  Ribosomal protein L25, Ctc-form; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: HMPREF1221_00209
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: HMPREF1221_00212
symbol: lepA
gene_biotype: protein_coding
description:
  Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: HMPREF1221_00228
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: HMPREF1221_00231
symbol: EPF27423.1
gene_biotype: protein_coding
description:
  Sodium pump decarboxylase, gamma subunit; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the OadG family.


ensembl_gene_id: HMPREF1221_00237
symbol: EPF27429.1
gene_biotype: protein_coding
description:
  Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: HMPREF1221_00238
symbol: EPF27430.1
gene_biotype: protein_coding
description:
  Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain; Belongs to the ABC transporter superfamily.


ensembl_gene_id: HMPREF1221_00248
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase, SecA subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: HMPREF1221_00255
symbol: mutS2
gene_biotype: protein_coding
description:
  Hypothetical protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: HMPREF1221_00256
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: HMPREF1221_00260
symbol: EPF27452.1
gene_biotype: protein_coding
description:
  SufS family cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: HMPREF1221_00269
symbol: EPF27461.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: HMPREF1221_00289
symbol: EPF27481.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: HMPREF1221_00290
symbol: EPF27482.1
gene_biotype: protein_coding
description:
  Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: HMPREF1221_00297
symbol: nagB
gene_biotype: protein_coding
description:
  Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.


ensembl_gene_id: HMPREF1221_00307
symbol: EPF27499.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: HMPREF1221_00309
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: HMPREF1221_00313
symbol: smc
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: HMPREF1221_00316
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease, ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: HMPREF1221_00317
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit 1; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: HMPREF1221_00318
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: HMPREF1221_00332
symbol: fliW
gene_biotype: protein_coding
description:
  Hypothetical protein; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.


ensembl_gene_id: HMPREF1221_00333
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: HMPREF1221_00338
symbol: rimP
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: HMPREF1221_00339
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription termination factor NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: HMPREF1221_00340
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: HMPREF1221_00341
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: HMPREF1221_00342
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine(55) synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: HMPREF1221_00347
symbol: EPF27533.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: HMPREF1221_00362
symbol: rsmA
gene_biotype: protein_coding
description:
  Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: HMPREF1221_00363
symbol: EPF27549.1
gene_biotype: protein_coding
description:
  YggS family pyridoxal phosphate enzyme; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: HMPREF1221_00365
symbol: EPF27551.1
gene_biotype: protein_coding
description:
  RluA family pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: HMPREF1221_00377
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: HMPREF1221_00385
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: HMPREF1221_00387
symbol: EPF26810.1
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: HMPREF1221_00396
symbol: nadK
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: HMPREF1221_00407
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: HMPREF1221_00409
symbol: rodA
gene_biotype: protein_coding
description:
  Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: HMPREF1221_00416
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: HMPREF1221_00417
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: HMPREF1221_00418
symbol: mltG
gene_biotype: protein_coding
description:
  Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: HMPREF1221_00438
symbol: EPF26860.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: HMPREF1221_00445
symbol: ldh
gene_biotype: protein_coding
description:
  L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.


ensembl_gene_id: HMPREF1221_00446
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: HMPREF1221_00458
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: HMPREF1221_00461
symbol: coaD
gene_biotype: protein_coding
description:
  Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: HMPREF1221_00466
symbol: EPF26886.1
gene_biotype: protein_coding
description:
  Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: HMPREF1221_00468
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: HMPREF1221_00469
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: HMPREF1221_00470
symbol: EPF26890.1
gene_biotype: protein_coding
description:
  Di-trans,poly-cis-decaprenylcistransferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: HMPREF1221_00472
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: HMPREF1221_00482
symbol: EPF26902.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.


ensembl_gene_id: HMPREF1221_00510
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucine-tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.


ensembl_gene_id: HMPREF1221_00518
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: HMPREF1221_00519
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: HMPREF1221_00523
symbol: dinB
gene_biotype: protein_coding
description:
  Hypothetical protein; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: HMPREF1221_00535
symbol: surE
gene_biotype: protein_coding
description:
  5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: HMPREF1221_00537
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: HMPREF1221_00547
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: HMPREF1221_00552
symbol: EPF26971.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: HMPREF1221_00557
symbol: EPF26976.1
gene_biotype: protein_coding
description:
  RdgB/HAM1 family non-canonical purine NTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: HMPREF1221_00559
symbol: EPF26978.1
gene_biotype: protein_coding
description:
  Flagellar filament core protein; Component of the core of the flagella. Belongs to the bacterial flagellin family.


ensembl_gene_id: HMPREF1221_00562
symbol: EPF26981.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: HMPREF1221_00576
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: HMPREF1221_00586
symbol: EPF27005.1
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: HMPREF1221_00598
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: HMPREF1221_00601
symbol: tpiA
gene_biotype: protein_coding
description:
  Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: HMPREF1221_00607
symbol: EPF27026.1
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: HMPREF1221_00616
symbol: EPF27034.1
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: HMPREF1221_00619
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent protease HslVU, ATPase subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: HMPREF1221_00620
symbol: hslV
gene_biotype: protein_coding
description:
  ATP-dependent protease HslVU, peptidase subunit; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: HMPREF1221_00621
symbol: xerC
gene_biotype: protein_coding
description:
  Hypothetical protein; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: HMPREF1221_00622
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: HMPREF1221_00626
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: HMPREF1221_00627
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: HMPREF1221_00630
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: HMPREF1221_00632
symbol: rsmH
gene_biotype: protein_coding
description:
  S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: HMPREF1221_00643
symbol: nadE
gene_biotype: protein_coding
description:
  NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: HMPREF1221_00653
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: HMPREF1221_00657
symbol: atpB-2
gene_biotype: protein_coding
description:
  V-type ATP synthase beta chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.


ensembl_gene_id: HMPREF1221_00658
symbol: atpA-2
gene_biotype: protein_coding
description:
  V-type ATP synthase alpha chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: HMPREF1221_00671
symbol: EPF27088.1
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: HMPREF1221_00672
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: HMPREF1221_00673
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: HMPREF1221_00675
symbol: EPF27092.1
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.


ensembl_gene_id: HMPREF1221_00676
symbol: EPF27093.1
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.


ensembl_gene_id: HMPREF1221_00677
symbol: EPF27094.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: HMPREF1221_00683
symbol: EPF27100.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: HMPREF1221_00685
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: HMPREF1221_00697
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: HMPREF1221_00700
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: HMPREF1221_00715
symbol: EPF27132.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: HMPREF1221_00717
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: HMPREF1221_00718
symbol: fabV
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon-carbon double bond in an enoyl moiety that is covalently linked to a coenzyme A (CoA); Belongs to the TER reductase family.


ensembl_gene_id: HMPREF1221_00719
symbol: EPF27136.1
gene_biotype: protein_coding
description:
  Beta-ketoacyl-acyl-carrier-protein synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: HMPREF1221_00722
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: HMPREF1221_00724
symbol: rplT
gene_biotype: protein_coding
description:
  Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: HMPREF1221_00729
symbol: EPF27146.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.


ensembl_gene_id: HMPREF1221_00735
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosine-tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: HMPREF1221_00740
symbol: uvrB
gene_biotype: protein_coding
description:
  UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...]


ensembl_gene_id: HMPREF1221_00745
symbol: EPF27162.1
gene_biotype: protein_coding
description:
  Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.


ensembl_gene_id: HMPREF1221_00761
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: HMPREF1221_00775
symbol: thiI
gene_biotype: protein_coding
description:
  tRNA sulfurtransferase ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.


ensembl_gene_id: HMPREF1221_00779
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: HMPREF1221_00780
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine(38-40) synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: HMPREF1221_00782
symbol: acpS
gene_biotype: protein_coding
description:
  Phosphopantetheine-protein transferase domain; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: HMPREF1221_00784
symbol: dacA
gene_biotype: protein_coding
description:
  TIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: HMPREF1221_00786
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: HMPREF1221_00788
symbol: EPF26604.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: HMPREF1221_00793
symbol: metAA
gene_biotype: protein_coding
description:
  Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.


ensembl_gene_id: HMPREF1221_00797
symbol: gpmA
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase 1 family protein; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: HMPREF1221_00808
symbol: kduI
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.


ensembl_gene_id: HMPREF1221_00822
symbol: purE
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase, catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: HMPREF1221_00824
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: HMPREF1221_00826
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: HMPREF1221_00837
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: HMPREF1221_00840
symbol: dut
gene_biotype: protein_coding
description:
  dUTP diphosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: HMPREF1221_00841
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: HMPREF1221_00842
symbol: rpsO
gene_biotype: protein_coding
description:
  Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: HMPREF1221_00858
symbol: coaX
gene_biotype: protein_coding
description:
  Pantothenate kinase, type III; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: HMPREF1221_00863
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: HMPREF1221_00889
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: HMPREF1221_00900
symbol: EPF26716.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: HMPREF1221_00909
symbol: valS
gene_biotype: protein_coding
description:
  valine-tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: HMPREF1221_00916
symbol: folD
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: HMPREF1221_00921
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: HMPREF1221_00922
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: HMPREF1221_00923
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: HMPREF1221_00933
symbol: gpmA-2
gene_biotype: protein_coding
description:
  2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: HMPREF1221_00936
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: HMPREF1221_00937
symbol: fusA
gene_biotype: protein_coding
description:
  Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]


ensembl_gene_id: HMPREF1221_00956
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: HMPREF1221_00961
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.


ensembl_gene_id: HMPREF1221_00964
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: HMPREF1221_00966
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: HMPREF1221_00990
symbol: cobB
gene_biotype: protein_coding
description:
  Hypothetical protein; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.


ensembl_gene_id: HMPREF1221_01002
symbol: EPF26515.1
gene_biotype: protein_coding
description:
  Glycogen/starch/alpha-glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: HMPREF1221_01005
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: HMPREF1221_01006
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: HMPREF1221_01021
symbol: EPF26533.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.


ensembl_gene_id: HMPREF1221_01022
symbol: aspS
gene_biotype: protein_coding
description:
  aspartate-tRNA ligase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: HMPREF1221_01025
symbol: EPF26537.1
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.


ensembl_gene_id: HMPREF1221_01030
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: HMPREF1221_01031
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: HMPREF1221_01032
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: HMPREF1221_01034
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase, SecY subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: HMPREF1221_01035
symbol: rplO
gene_biotype: protein_coding
description:
  Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: HMPREF1221_01037
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: HMPREF1221_01038
symbol: rplR
gene_biotype: protein_coding
description:
  Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: HMPREF1221_01039
symbol: rplF
gene_biotype: protein_coding
description:
  Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: HMPREF1221_01040
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: HMPREF1221_01041
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: HMPREF1221_01042
symbol: rplX
gene_biotype: protein_coding
description:
  Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: HMPREF1221_01043
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: HMPREF1221_01044
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: HMPREF1221_01046
symbol: rplP
gene_biotype: protein_coding
description:
  Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: HMPREF1221_01047
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: HMPREF1221_01048
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: HMPREF1221_01049
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: HMPREF1221_01050
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: HMPREF1221_01051
symbol: rplW
gene_biotype: protein_coding
description:
  Hypothetical protein; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: HMPREF1221_01053
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: HMPREF1221_01054
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: HMPREF1221_01055
symbol: tuf
gene_biotype: protein_coding
description:
  Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: HMPREF1221_01065
symbol: EPF26351.1
gene_biotype: protein_coding
description:
  Sigma-70 family RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: HMPREF1221_01102
symbol: EPF26388.1
gene_biotype: protein_coding
description:
  Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.


ensembl_gene_id: HMPREF1221_01103
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: HMPREF1221_01135
symbol: aat
gene_biotype: protein_coding
description:
  leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: HMPREF1221_01137
symbol: clpS
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: HMPREF1221_01140
symbol: serC
gene_biotype: protein_coding
description:
  Phosphoserine transaminase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.


ensembl_gene_id: HMPREF1221_01145
symbol: rex
gene_biotype: protein_coding
description:
  Hypothetical protein; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: HMPREF1221_01152
symbol: proS
gene_biotype: protein_coding
description:
  proline-tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacyl [...]


ensembl_gene_id: HMPREF1221_01189
symbol: EPF26475.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: HMPREF1221_01196
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanine-tRNA ligase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 2 subfamily.


ensembl_gene_id: HMPREF1221_01200
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: HMPREF1221_01214
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: HMPREF1221_01215
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: HMPREF1221_01239
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase UppP; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: HMPREF1221_01240
symbol: nnrD
gene_biotype: protein_coding
description:
  YjeF family domain-containing protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. In the C-terminal section; belongs to the NnrD/CARKD family.


ensembl_gene_id: HMPREF1221_01244
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA (guanine(527)-N(7))-methyltransferase GidB; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: HMPREF1221_01245
symbol: thyX
gene_biotype: protein_coding
description:
  Thymidylate synthase, flavin-dependent; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: HMPREF1221_01257
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: HMPREF1221_01260
symbol: glyQS
gene_biotype: protein_coding
description:
  glycine-tRNA ligase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: HMPREF1221_01262
symbol: EPF26191.1
gene_biotype: protein_coding
description:
  RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: HMPREF1221_01324
symbol: aroK
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: HMPREF1221_01330
symbol: EPF26258.1
gene_biotype: protein_coding
description:
  Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.


ensembl_gene_id: HMPREF1221_01336
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: HMPREF1221_01342
symbol: mscL
gene_biotype: protein_coding
description:
  Large conductance mechanosensitive channel protein; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: HMPREF1221_01350
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: HMPREF1221_01402
symbol: pfkA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Atypical ATP-dependent clade 'X' sub-subfamily.


ensembl_gene_id: HMPREF1221_01425
symbol: EPF26082.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: HMPREF1221_01428
symbol: gltX
gene_biotype: protein_coding
description:
  glutamate-tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: HMPREF1221_01429
symbol: EPF26086.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: HMPREF1221_01445
symbol: dapL
gene_biotype: protein_coding
description:
  LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate.


ensembl_gene_id: HMPREF1221_01446
symbol: EPF26103.1
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase, NADP-dependent; Belongs to the isocitrate and isopropylmalate dehydrogenases family.


ensembl_gene_id: HMPREF1221_01479
symbol: EPF26132.1
gene_biotype: protein_coding
description:
  Hydrophobe/amphiphile efflux-1 (HAE1) family RND transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: HMPREF1221_01480
symbol: EPF26133.1
gene_biotype: protein_coding
description:
  Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: HMPREF1221_01483
symbol: EPF25980.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: HMPREF1221_01506
symbol: efp
gene_biotype: protein_coding
description:
  Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: HMPREF1221_01511
symbol: phnC
gene_biotype: protein_coding
description:
  Phosphonate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.


ensembl_gene_id: HMPREF1221_01513
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: HMPREF1221_01522
symbol: rbsK
gene_biotype: protein_coding
description:
  Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: HMPREF1221_01530
symbol: EPF26027.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: HMPREF1221_01531
symbol: EPF26028.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: HMPREF1221_01532
symbol: EPF26029.1
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: HMPREF1221_01537
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: HMPREF1221_01541
symbol: lexA
gene_biotype: protein_coding
description:
  Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: HMPREF1221_01543
symbol: hprK
gene_biotype: protein_coding
description:
  HPr(Ser) kinase/phosphatase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr).


ensembl_gene_id: HMPREF1221_01551
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: HMPREF1221_01577
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated endoribonuclease cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: HMPREF1221_01578
symbol: cas1
gene_biotype: protein_coding
description:
  CRISPR-associated endonuclease cas1, subtype I-c/dvulg; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: HMPREF1221_01579
symbol: EPF25858.1
gene_biotype: protein_coding
description:
  CRISPR-associated protein cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.


ensembl_gene_id: HMPREF1221_01591
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase, A subunit; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: HMPREF1221_01592
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: HMPREF1221_01593
symbol: msrA
gene_biotype: protein_coding
description:
  methionine-R-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: HMPREF1221_01594
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: HMPREF1221_01595
symbol: EPF25874.1
gene_biotype: protein_coding
description:
  DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]


ensembl_gene_id: HMPREF1221_01596
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.


ensembl_gene_id: HMPREF1221_01601
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: HMPREF1221_01602
symbol: EPF25881.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: HMPREF1221_01603
symbol: yidC
gene_biotype: protein_coding
description:
  YidC/Oxa1 family membrane protein insertase; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: HMPREF1221_01630
symbol: EPF25909.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: HMPREF1221_01666
symbol: queH
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: HMPREF1221_01668
symbol: EPF25947.1
gene_biotype: protein_coding
description:
  methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: HMPREF1221_01692
symbol: EPF25701.1
gene_biotype: protein_coding
description:
  2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.


ensembl_gene_id: HMPREF1221_01742
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: HMPREF1221_01754
symbol: EPF25763.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: HMPREF1221_01768
symbol: EPF25777.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.


ensembl_gene_id: HMPREF1221_01770
symbol: argJ
gene_biotype: protein_coding
description:
  Glutamate N-acetyltransferase/amino-acid acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: HMPREF1221_01771
symbol: argB
gene_biotype: protein_coding
description:
  Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: HMPREF1221_01774
symbol: EPF25783.1
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: HMPREF1221_01775
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: HMPREF1221_01776
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: HMPREF1221_01791
symbol: rny
gene_biotype: protein_coding
description:
  2',3'-cyclic-nucleotide 2'-phosphodiesterase; Endoribonuclease that initiates mRNA decay. Belongs to the RNase Y family.


ensembl_gene_id: HMPREF1221_01802
symbol: proA
gene_biotype: protein_coding
description:
  Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: HMPREF1221_01803
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: HMPREF1221_01804
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: HMPREF1221_01828
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III, subunit gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: HMPREF1221_01829
symbol: EPF25838.1
gene_biotype: protein_coding
description:
  YbaB/EbfC family DNA-binding protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: HMPREF1221_01830
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: HMPREF1221_01853
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: HMPREF1221_01854
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII, small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: HMPREF1221_01855
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: HMPREF1221_01878
symbol: birA
gene_biotype: protein_coding
description:
  biotin-[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: HMPREF1221_01881
symbol: EPF25338.1
gene_biotype: protein_coding
description:
  MTA/SAH nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.


ensembl_gene_id: HMPREF1221_01883
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: HMPREF1221_01884
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: HMPREF1221_01896
symbol: EPF25353.1
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: HMPREF1221_01898
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: HMPREF1221_01901
symbol: murJ
gene_biotype: protein_coding
description:
  Integral membrane protein MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: HMPREF1221_01908
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: HMPREF1221_01909
symbol: EPF25366.1
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase/homocitrate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.


ensembl_gene_id: HMPREF1221_01923
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: HMPREF1221_01927
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: HMPREF1221_01937
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: HMPREF1221_01938
symbol: secF
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: HMPREF1221_01939
symbol: secD
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: HMPREF1221_01940
symbol: yajC
gene_biotype: protein_coding
description:
  Preprotein translocase, YajC subunit; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: HMPREF1221_01951
symbol: metN
gene_biotype: protein_coding
description:
  Hypothetical protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: HMPREF1221_01960
symbol: ispDF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF); Belongs to the IspF family.  In the N-terminal section; belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.


ensembl_gene_id: HMPREF1221_01978
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: HMPREF1221_01987
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: HMPREF1221_01988
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine(37)-N(1))-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: HMPREF1221_01989
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: HMPREF1221_02003
symbol: clpB
gene_biotype: protein_coding
description:
  Chaperone ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: HMPREF1221_02016
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: HMPREF1221_02017
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: HMPREF1221_02030
symbol: fusA-2
gene_biotype: protein_coding
description:
  Elongation factor G 2; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: HMPREF1221_02067
symbol: tsaD
gene_biotype: protein_coding
description:
  glycoprotease/Kae1 family metallohydrolase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: HMPREF1221_02075
symbol: EPF25525.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: HMPREF1221_02076
symbol: der
gene_biotype: protein_coding
description:
  Ribosome-associated GTPase EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: HMPREF1221_02086
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: HMPREF1221_02099
symbol: EPF25549.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: HMPREF1221_02114
symbol: galK
gene_biotype: protein_coding
description:
  Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.


ensembl_gene_id: HMPREF1221_02119
symbol: rsfS
gene_biotype: protein_coding
description:
  Iojap-like ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: HMPREF1221_02122
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: HMPREF1221_02123
symbol: obg
gene_biotype: protein_coding
description:
  Obg family GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: HMPREF1221_02126
symbol: rplU
gene_biotype: protein_coding
description:
  Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: HMPREF1221_02127
symbol: rpsG
gene_biotype: protein_coding
description:
  Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: HMPREF1221_02128
symbol: rpsL
gene_biotype: protein_coding
description:
  30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: HMPREF1221_02129
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: HMPREF1221_02131
symbol: rplL
gene_biotype: protein_coding
description:
  Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: HMPREF1221_02132
symbol: rplJ
gene_biotype: protein_coding
description:
  Hypothetical protein; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: HMPREF1221_02133
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: HMPREF1221_02134
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: HMPREF1221_02135
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription termination/antitermination factor NusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: HMPREF1221_02136
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: HMPREF1221_02149
symbol: rsmI
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: HMPREF1221_02154
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: HMPREF1221_02167
symbol: EPF25613.1
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: HMPREF1221_02168
symbol: dnaJ
gene_biotype: protein_coding
description:
  Chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and  [...]


ensembl_gene_id: HMPREF1221_02170
symbol: grpE
gene_biotype: protein_coding
description:
  Hypothetical protein; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dep [...]


ensembl_gene_id: HMPREF1221_02181
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: HMPREF1221_02183
symbol: EPF25629.1
gene_biotype: protein_coding
description:
  Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.


ensembl_gene_id: HMPREF1221_02191
symbol: ftsH
gene_biotype: protein_coding
description:
  ATP-dependent metallopeptidase HflB; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: HMPREF1221_02194
symbol: EPF25640.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: HMPREF1221_02206
symbol: nusB
gene_biotype: protein_coding
description:
  Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: HMPREF1221_02208
symbol: alaS
gene_biotype: protein_coding
description:
  alanine-tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: HMPREF1221_02219
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: HMPREF1221_02247
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate transaminase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: HMPREF1221_02265
symbol: glyA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: HMPREF1221_02290
symbol: groS
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: HMPREF1221_02292
symbol: EPF25208.1
gene_biotype: protein_coding
description:
  RsmE family RNA methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: HMPREF1221_02295
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: HMPREF1221_02312
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: HMPREF1221_02319
symbol: rlmE
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase J; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.


ensembl_gene_id: HMPREF1221_02323
symbol: cheB
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: HMPREF1221_02352
symbol: rplM
gene_biotype: protein_coding
description:
  Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: HMPREF1221_02359
symbol: pckG
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase [GTP]; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family.


ensembl_gene_id: HMPREF1221_02397
symbol: clpP-2
gene_biotype: protein_coding
description:
  ATP-dependent Clp endopeptidase, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: HMPREF1221_02412
symbol: rnfA
gene_biotype: protein_coding
description:
  Electron transport complex, rnfabcdge type, A subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: HMPREF1221_02413
symbol: rnfE
gene_biotype: protein_coding
description:
  Electron transport complex, rnfabcdge type, E subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: HMPREF1221_02415
symbol: rnfD
gene_biotype: protein_coding
description:
  Electron transport complex, rnfabcdge type, D subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: HMPREF1221_02416
symbol: rnfC
gene_biotype: protein_coding
description:
  Electron transport complex, rnfabcdge type, C subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.


ensembl_gene_id: HMPREF1221_02425
symbol: EPF25070.1
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.


ensembl_gene_id: HMPREF1221_02445
symbol: dapF
gene_biotype: protein_coding
description:
  Carbamoyl-phosphate synthase, large subunit; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. Belongs to the CarB family.


ensembl_gene_id: HMPREF1221_02452
symbol: EPF25097.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family, group 3; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: HMPREF1221_02468
symbol: EPF25113.1
gene_biotype: protein_coding
description:
  Ferrous iron transporter B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: HMPREF1221_02471
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: HMPREF1221_02474
symbol: EPF25119.1
gene_biotype: protein_coding
description:
  CzcA family heavy metal efflux pump; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


# pathwayInfo

id: CL:1001
description: Histidine biosynthesis, and Aromatic amino acid family metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1001_Histidine_biosynthesis,_and_Aromatic_amino_acid_family_metabolic_process


id: CL:101
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:101_Ribosome,_and_Translation_regulator_activity


id: CL:102
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:102_Ribosome,_and_Translation_regulator_activity


id: CL:1020
description: Chorismate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1020_Chorismate_biosynthetic_process


id: CL:1035
description: Nucleoside monophosphate biosynthetic process, and Pyrimidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1035_Nucleoside_monophosphate_biosynthetic_process,_and_Pyrimidine_metabolism


id: CL:1036
description: Ribonucleoside monophosphate metabolic process, and Pyrimidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1036_Ribonucleoside_monophosphate_metabolic_process,_and_Pyrimidine_metabolism


id: CL:1037
description: Ribonucleoside monophosphate biosynthetic process, and Tetrahydrofolate interconversion
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1037_Ribonucleoside_monophosphate_biosynthetic_process,_and_Tetrahydrofolate_interconversion


id: CL:1043
description: Purine nucleobase metabolic process, and Formyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1043_Purine_nucleobase_metabolic_process,_and_Formyl_transferase


id: CL:1067
description: De novo UMP biosynthetic process, and 2Fe-2S
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1067_De_novo_UMP_biosynthetic_process,_and_2Fe-2S


id: CL:1070
description: Pyrimidine nucleobase biosynthetic process, and MGS-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1070_Pyrimidine_nucleobase_biosynthetic_process,_and_MGS-like_domain


id: CL:1089
description: Nucleoside phosphate catabolic process, and Nucleoside metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1089_Nucleoside_phosphate_catabolic_process,_and_Nucleoside_metabolic_process


id: CL:1092
description: AMP salvage, and GMP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1092_AMP_salvage,_and_GMP_metabolic_process


id: CL:1103
description: 5-nucleotidase, C-terminal domain, and Pyrimidine nucleoside metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1103_5-nucleotidase,_C-terminal_domain,_and_Pyrimidine_nucleoside_metabolic_process


id: CL:1119
description: Deoxyribonucleotide biosynthetic process, and Deoxyribonucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1119_Deoxyribonucleotide_biosynthetic_process,_and_Deoxyribonucleoside_monophosphate_metabolic_process


id: CL:1137
description: Glycine, serine and threonine metabolism, and Phosphoglycerate mutase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1137_Glycine,_serine_and_threonine_metabolism,_and_Phosphoglycerate_mutase_family


id: CL:1139
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1139_D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD_binding_domain,_and_Phosphoglycerate_mutase_family

description:
  D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain, and Phosphoglycerate mutase family


id: CL:1160
description: Mixed, incl. Pyridine nucleotide metabolic process, and Ribosome assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1160_Mixed,_incl._Pyridine_nucleotide_metabolic_process,_and_Ribosome_assembly


id: CL:1162
description: Pyridine nucleotide metabolic process, and Ribosome assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1162_Pyridine_nucleotide_metabolic_process,_and_Ribosome_assembly


id: CL:1164
description: Ribosome assembly, and NAD biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1164_Ribosome_assembly,_and_NAD_biosynthetic_process


id: CL:1175
description: Pyridine nucleotide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1175_Pyridine_nucleotide_metabolic_process


id: CL:1193
description: Haloacid dehalogenase-like hydrolase, and NAD binding domain of 6-phosphogluconate dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1193_Haloacid_dehalogenase-like_hydrolase,_and_NAD_binding_domain_of_6-phosphogluconate_dehydrogenase


id: CL:1206
description: Mixed, incl. Pentose phosphate pathway, and Pentose and glucuronate interconversions
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1206_Mixed,_incl._Pentose_phosphate_pathway,_and_Pentose_and_glucuronate_interconversions


id: CL:1207
description: Mixed, incl. Pentose phosphate pathway, and Pentose and glucuronate interconversions
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1207_Mixed,_incl._Pentose_phosphate_pathway,_and_Pentose_and_glucuronate_interconversions


id: CL:1208
description: Mixed, incl. Pentose phosphate pathway, and Pentose and glucuronate interconversions
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1208_Mixed,_incl._Pentose_phosphate_pathway,_and_Pentose_and_glucuronate_interconversions


id: CL:1209
description: Mixed, incl. Pentose phosphate pathway, and Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1209_Mixed,_incl._Pentose_phosphate_pathway,_and_Phosphotransferase_system_(PTS)


id: CL:1210
description: Mixed, incl. Pentose phosphate pathway, and Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1210_Mixed,_incl._Pentose_phosphate_pathway,_and_Phosphotransferase_system_(PTS)


id: CL:1211
description: Mixed, incl. Pentose phosphate pathway, and Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1211_Mixed,_incl._Pentose_phosphate_pathway,_and_Phosphotransferase_system_(PTS)


id: CL:1212
description: Pentose phosphate pathway, and Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1212_Pentose_phosphate_pathway,_and_Phosphotransferase_system_(PTS)


id: CL:1213
description: Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1213_Pentose_phosphate_pathway,_and_Glycolysis


id: CL:1214
description: Glycolytic process, and NADPH regeneration
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1214_Glycolytic_process,_and_NADPH_regeneration


id: CL:122
description: Large ribosomal subunit, and K homology RNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:122_Large_ribosomal_subunit,_and_K_homology_RNA-binding_domain


id: CL:1263
description: Phosphotransferase system (PTS), and DeoR C terminal sensor domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1263_Phosphotransferase_system_(PTS),_and_DeoR_C_terminal_sensor_domain


id: CL:1283
description: Mixed, incl. Alcohol dehydrogenase GroES-like domain, and Lipid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1283_Mixed,_incl._Alcohol_dehydrogenase_GroES-like_domain,_and_Lipid_catabolic_process


id: CL:1299
description: KDPG and KHG aldolase, and pfkB family carbohydrate kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1299_KDPG_and_KHG_aldolase,_and_pfkB_family_carbohydrate_kinase


id: CL:1311
description: Mixed, incl. Cytosine transport, and Phosphomethylpyrimidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1311_Mixed,_incl._Cytosine_transport,_and_Phosphomethylpyrimidine_kinase


id: CL:1324
description: Mixed, incl. Uronic acid metabolic process, and Hexitol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1324_Mixed,_incl._Uronic_acid_metabolic_process,_and_Hexitol_metabolic_process


id: CL:1326
description: Uronic acid metabolic process, and Hexitol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1326_Uronic_acid_metabolic_process,_and_Hexitol_metabolic_process


id: CL:1345
description: S-adenosylmethionine cycle, and Na+/H+ antiporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1345_S-adenosylmethionine_cycle,_and_Na+/H+_antiporter_family


id: CL:1363
description: N-acetylglucosamine metabolic process, and SIS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1363_N-acetylglucosamine_metabolic_process,_and_SIS_domain


id: CL:1384
description: Mixed, incl. Tyrosine phosphatase family, and Phosphonate and phosphinate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1384_Mixed,_incl._Tyrosine_phosphatase_family,_and_Phosphonate_and_phosphinate_metabolism


id: CL:1387
description: Mixed, incl. Tyrosine phosphatase family, and Modulation by Mtb of host immune system
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1387_Mixed,_incl._Tyrosine_phosphatase_family,_and_Modulation_by_Mtb_of_host_immune_system


id: CL:139
description: Small ribosomal subunit, and rRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:139_Small_ribosomal_subunit,_and_rRNA-binding


id: CL:1404
description: Mixed, incl. Periplasmic binding protein-like domain, and Dephosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1404_Mixed,_incl._Periplasmic_binding_protein-like_domain,_and_Dephosphorylation


id: CL:1421
description: Mixed, incl. TPR repeat, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1421_Mixed,_incl._TPR_repeat,_and_Signal


id: CL:1422
description: Mixed, incl. TPR repeat, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1422_Mixed,_incl._TPR_repeat,_and_Signal


id: CL:1423
description: Mixed, incl. Tetratricopeptide repeats, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1423_Mixed,_incl._Tetratricopeptide_repeats,_and_Signal


id: CL:1424
description: Mixed, incl. Tetratricopeptide repeats, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1424_Mixed,_incl._Tetratricopeptide_repeats,_and_Signal


id: CL:1425
description: Mixed, incl. Tetratricopeptide repeats, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1425_Mixed,_incl._Tetratricopeptide_repeats,_and_Signal


id: CL:1426
description: Mixed, incl. Tetratricopeptide repeats, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1426_Mixed,_incl._Tetratricopeptide_repeats,_and_Signal


id: CL:1427
description: Mixed, incl. Tetratricopeptide repeats, and Two-component system
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1427_Mixed,_incl._Tetratricopeptide_repeats,_and_Two-component_system


id: CL:1429
description: Mostly uncharacterized, incl. Nucleotide salvage, and Oligosaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1429_Mostly_uncharacterized,_incl._Nucleotide_salvage,_and_Oligosaccharide_metabolic_process


id: CL:1432
description: Mostly uncharacterized, incl. Nucleotide salvage, and FecR protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1432_Mostly_uncharacterized,_incl._Nucleotide_salvage,_and_FecR_protein


id: CL:1434
description: Mostly uncharacterized, incl. Nucleotide salvage, and HEAT repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1434_Mostly_uncharacterized,_incl._Nucleotide_salvage,_and_HEAT_repeats


id: CL:1437
description: Mostly uncharacterized, incl. HEAT repeats, and Borrelia P83/100 protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1437_Mostly_uncharacterized,_incl._HEAT_repeats,_and_Borrelia_P83/100_protein


id: CL:1441
description: Mixed, incl. Borrelia P83/100 protein, and Transglycosylase SLT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1441_Mixed,_incl._Borrelia_P83/100_protein,_and_Transglycosylase_SLT_domain


id: CL:1466
description: Mixed, incl. Lipid transport, and DbpA RNA binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1466_Mixed,_incl._Lipid_transport,_and_DbpA_RNA_binding_domain


id: CL:1505
description: Mixed, incl. Tetratricopeptide repeats, and Trypsin-like peptidase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1505_Mixed,_incl._Tetratricopeptide_repeats,_and_Trypsin-like_peptidase_domain


id: CL:1507
description: Mixed, incl. Tetratricopeptide repeats, and ANK repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1507_Mixed,_incl._Tetratricopeptide_repeats,_and_ANK_repeat


id: CL:1510
description: Tetratricopeptide repeats, and ANK repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1510_Tetratricopeptide_repeats,_and_ANK_repeat


id: CL:1511
description: Tetratricopeptide repeats, and ANK repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1511_Tetratricopeptide_repeats,_and_ANK_repeat


id: CL:1515
description: Adaptive Immune System, and Tetratricopeptide repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1515_Adaptive_Immune_System,_and_Tetratricopeptide_repeats


id: CL:1555
description: Mixed, incl. Methyltransferase small domain, and ANK repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1555_Mixed,_incl._Methyltransferase_small_domain,_and_ANK_repeat


id: CL:156
description: Large ribosomal subunit, and rRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:156_Large_ribosomal_subunit,_and_rRNA-binding


id: CL:157
description: Mixed, incl. Large ribosomal subunit rRNA binding, and KOW (Kyprides, Ouzounis, Woese) motif.
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:157_Mixed,_incl._Large_ribosomal_subunit_rRNA_binding,_and_KOW_(Kyprides,_Ouzounis,_Woese)_motif.


id: CL:1572
description: Mixed, incl. Porin activity, and Polysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1572_Mixed,_incl._Porin_activity,_and_Polysaccharide_transport


id: CL:1574
description: Mixed, incl. Porin activity, and Listeria-Bacteroides repeat domain (List_Bact_rpt)
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1574_Mixed,_incl._Porin_activity,_and_Listeria-Bacteroides_repeat_domain_(List_Bact_rpt)


id: CL:1610
description: Mixed, incl. Peptidoglycan catabolic process, and Iron-sulfur cluster-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1610_Mixed,_incl._Peptidoglycan_catabolic_process,_and_Iron-sulfur_cluster-binding_domain


id: CL:1623
description: Membrane organization, and Carboxysome
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1623_Membrane_organization,_and_Carboxysome


id: CL:1635
description: Mixed, incl. Thiolester hydrolase activity, and Tetratricopeptide repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1635_Mixed,_incl._Thiolester_hydrolase_activity,_and_Tetratricopeptide_repeats


id: CL:1644
description: Mixed, incl. Lactate oxidation, and Polymer-forming cytoskeletal
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1644_Mixed,_incl._Lactate_oxidation,_and_Polymer-forming_cytoskeletal


id: CL:1653
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1653_Mostly_uncharacterized,_incl._Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_and_Glycosylation

description:
  Mostly uncharacterized, incl. Oxidoreductase activity, acting on a sulfur group of donors, and Glycosylation


id: CL:1656
description: Mixed, incl. Oxidoreductase activity, acting on a sulfur group of donors, and Glycosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1656_Mixed,_incl._Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_and_Glycosylation


id: CL:1675
description: Mixed, incl. Bacterial capsule synthesis protein PGA_cap, and Heme metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1675_Mixed,_incl._Bacterial_capsule_synthesis_protein_PGA_cap,_and_Heme_metabolic_process


id: CL:168
description: Large ribosomal subunit, and Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:168_Large_ribosomal_subunit,_and_Structural_constituent_of_ribosome


id: CL:1689
description: Flagellar assembly, and Signaling
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1689_Flagellar_assembly,_and_Signaling


id: CL:1690
description: Flagellar assembly, and Signaling
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1690_Flagellar_assembly,_and_Signaling


id: CL:1691
description: Flagellar assembly, and Sigma factor PP2C-like phosphatases
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1691_Flagellar_assembly,_and_Sigma_factor_PP2C-like_phosphatases


id: CL:1706
description: Bacterial-type flagellum basal body
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1706_Bacterial-type_flagellum_basal_body


id: CL:1707
description: Flagella basal body rod protein, and Cytoskeletal motor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1707_Flagella_basal_body_rod_protein,_and_Cytoskeletal_motor_activity


id: CL:1718
description: FliG C-terminal domain, and Type III flagellar switch regulator (C-ring) FliN C-term
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1718_FliG_C-terminal_domain,_and_Type_III_flagellar_switch_regulator_(C-ring)_FliN_C-term


id: CL:1770
description: Bacterial-type flagellum hook, and Bacterial flagellum biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1770_Bacterial-type_flagellum_hook,_and_Bacterial_flagellum_biogenesis


id: CL:1789
description: Sigma factor PP2C-like phosphatases, and Anti-sigma factor antagonist activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1789_Sigma_factor_PP2C-like_phosphatases,_and_Anti-sigma_factor_antagonist_activity


id: CL:180
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:180_Structural_constituent_of_ribosome


id: CL:1804
description: Signaling, and Adenylyl- / guanylyl cyclase, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1804_Signaling,_and_Adenylyl-_/_guanylyl_cyclase,_catalytic_domain


id: CL:1806
description: Signaling, and Adenylyl- / guanylyl cyclase, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1806_Signaling,_and_Adenylyl-_/_guanylyl_cyclase,_catalytic_domain


id: CL:1808
description: Signaling, and Adenylyl- / guanylyl cyclase, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1808_Signaling,_and_Adenylyl-_/_guanylyl_cyclase,_catalytic_domain


id: CL:1809
description: Intracellular signal transduction, and Adenylyl- / guanylyl cyclase, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1809_Intracellular_signal_transduction,_and_Adenylyl-_/_guanylyl_cyclase,_catalytic_domain


id: CL:1812
description: Mixed, incl. Adenylyl- / guanylyl cyclase, catalytic domain, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1812_Mixed,_incl._Adenylyl-_/_guanylyl_cyclase,_catalytic_domain,_and_Diguanylate_cyclase


id: CL:1814
description: Mixed, incl. Histidine Phosphotransfer domain, and Cyclic nucleotide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1814_Mixed,_incl._Histidine_Phosphotransfer_domain,_and_Cyclic_nucleotide_metabolic_process


id: CL:182
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:182_Structural_constituent_of_ribosome


id: CL:1824
description: Adenylyl- / guanylyl cyclase, catalytic domain, and Region found in RelA / SpoT proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1824_Adenylyl-_/_guanylyl_cyclase,_catalytic_domain,_and_Region_found_in_RelA_/_SpoT_proteins


id: CL:183
description: Large ribosomal subunit rRNA binding, and Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:183_Large_ribosomal_subunit_rRNA_binding,_and_Structural_constituent_of_ribosome


id: CL:1835
description: Two-component regulatory system, and Protein histidine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1835_Two-component_regulatory_system,_and_Protein_histidine_kinase_activity


id: CL:1846
description: Molecular transducer activity, and Methyltransferase, chemotaxis proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1846_Molecular_transducer_activity,_and_Methyltransferase,_chemotaxis_proteins


id: CL:1850
description: Two component signalling adaptor domain, and Methyltransferase, chemotaxis proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1850_Two_component_signalling_adaptor_domain,_and_Methyltransferase,_chemotaxis_proteins


id: CL:1876
description: PAS domain, and Bacterial regulatory protein, Fis family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1876_PAS_domain,_and_Bacterial_regulatory_protein,_Fis_family


id: CL:1885
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Regulation of locomotion
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1885_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Regulation_of_locomotion


id: CL:1906
description: Lipopolysaccharide core region metabolic process, and Diguanylate cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1906_Lipopolysaccharide_core_region_metabolic_process,_and_Diguanylate_cyclase_activity


id: CL:1918
description: Mostly uncharacterized, incl. tRNA dihydrouridine synthesis, and TatD related DNase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1918_Mostly_uncharacterized,_incl._tRNA_dihydrouridine_synthesis,_and_TatD_related_DNase


id: CL:1919
description: Mixed, incl. tRNA dihydrouridine synthesis, and TatD related DNase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1919_Mixed,_incl._tRNA_dihydrouridine_synthesis,_and_TatD_related_DNase


id: CL:1930
description: Mixed, incl. Sigma factor, and Cyclic nucleotide-monophosphate binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1930_Mixed,_incl._Sigma_factor,_and_Cyclic_nucleotide-monophosphate_binding_domain


id: CL:1939
description: Mostly uncharacterized, incl. Memo-like protein, and Phosphorylase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1939_Mostly_uncharacterized,_incl._Memo-like_protein,_and_Phosphorylase_superfamily


id: CL:194
description: Mixed, incl. Ribosomal large subunit assembly, and Large ribosomal subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:194_Mixed,_incl._Ribosomal_large_subunit_assembly,_and_Large_ribosomal_subunit


id: CL:1942
description: Mixed, incl. Phosphorylase superfamily, and Aspartic-type peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1942_Mixed,_incl._Phosphorylase_superfamily,_and_Aspartic-type_peptidase_activity


id: CL:1960
description: Mixed, incl. Regulation of cell shape, and Peptidoglycan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1960_Mixed,_incl._Regulation_of_cell_shape,_and_Peptidoglycan_biosynthesis


id: CL:1962
description: Mixed, incl. Regulation of cell shape, and Peptidoglycan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1962_Mixed,_incl._Regulation_of_cell_shape,_and_Peptidoglycan_biosynthesis


id: CL:1963
description: Mixed, incl. Regulation of cell shape, and Peptidoglycan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1963_Mixed,_incl._Regulation_of_cell_shape,_and_Peptidoglycan_biosynthesis


id: CL:1965
description: Mixed, incl. Regulation of cell shape, and Peptidoglycan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1965_Mixed,_incl._Regulation_of_cell_shape,_and_Peptidoglycan_biosynthesis


id: CL:1967
description: Mixed, incl. Regulation of cell shape, and Penicillin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1967_Mixed,_incl._Regulation_of_cell_shape,_and_Penicillin_binding


id: CL:1969
description: Regulation of cell shape, and Penicillin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1969_Regulation_of_cell_shape,_and_Penicillin_binding


id: CL:1971
description: Regulation of cell shape, and Penicillin-binding Protein dimerisation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1971_Regulation_of_cell_shape,_and_Penicillin-binding_Protein_dimerisation_domain


id: CL:1972
description: Cell cycle, and D-Alanine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1972_Cell_cycle,_and_D-Alanine_metabolism


id: CL:1975
description: Mur ligase middle domain, and Glycosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1975_Mur_ligase_middle_domain,_and_Glycosylation


id: CL:1994
description: Reproduction, and Cell cycle protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:1994_Reproduction,_and_Cell_cycle_protein


id: CL:2006
description: Mixed, incl. Hsp70 protein, and Cell cycle protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2006_Mixed,_incl._Hsp70_protein,_and_Cell_cycle_protein


id: CL:2029
description: Mixed, incl. Septum formation initiator, and rRNA (cytosine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2029_Mixed,_incl._Septum_formation_initiator,_and_rRNA_(cytosine)_methyltransferase_activity


id: CL:204
description: Elongation factor, and Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:204_Elongation_factor,_and_Structural_constituent_of_ribosome


id: CL:2049
description: Signal peptide processing, and Lysin motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2049_Signal_peptide_processing,_and_Lysin_motif


id: CL:2058
description: Mixed, incl. Polymer-forming cytoskeletal, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2058_Mixed,_incl._Polymer-forming_cytoskeletal,_and_Sporulation


id: CL:2077
description: Mixed, incl. Proton-transporting two-sector ATPase complex, and Cell morphogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2077_Mixed,_incl._Proton-transporting_two-sector_ATPase_complex,_and_Cell_morphogenesis


id: CL:2079
description: Proton-transporting two-sector ATPase complex, and Cell morphogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2079_Proton-transporting_two-sector_ATPase_complex,_and_Cell_morphogenesis


id: CL:2082
description: Proton-transporting two-sector ATPase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2082_Proton-transporting_two-sector_ATPase_complex


id: CL:2084
description: Proton-transporting two-sector ATPase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2084_Proton-transporting_two-sector_ATPase_complex


id: CL:2096
description: Proton-transporting two-sector ATPase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2096_Proton-transporting_two-sector_ATPase_complex


id: CL:2112
description: Mixed, incl. Cell morphogenesis, and Bacterial-type flagellum-dependent swarming motility
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2112_Mixed,_incl._Cell_morphogenesis,_and_Bacterial-type_flagellum-dependent_swarming_motility


id: CL:2132
description: Mixed, incl. FAD dependent oxidoreductase, and PilZ domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2132_Mixed,_incl._FAD_dependent_oxidoreductase,_and_PilZ_domain


id: CL:2141
description: Potassium ion transport, and DNA methylation on adenine
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2141_Potassium_ion_transport,_and_DNA_methylation_on_adenine


id: CL:2150
description: Mixed, incl. DNA-binding transcription factor activity, and Bacterial nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2150_Mixed,_incl._DNA-binding_transcription_factor_activity,_and_Bacterial_nucleoid


id: CL:2151
description: Mixed, incl. DNA-binding transcription factor activity, and N-acetyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2151_Mixed,_incl._DNA-binding_transcription_factor_activity,_and_N-acetyltransferase_activity


id: CL:2152
description: Mixed, incl. Helix_turn_helix, arabinose operon control protein, and Sigma-70 factor, region 1.2
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2152_Mixed,_incl._Helix_turn_helix,_arabinose_operon_control_protein,_and_Sigma-70_factor,_region_1.2


id: CL:2154
description: Sigma-70 factor, region 1.2, and Helix_turn_helix, arabinose operon control protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2154_Sigma-70_factor,_region_1.2,_and_Helix_turn_helix,_arabinose_operon_control_protein


id: CL:2170
description: N-acetyltransferase activity, and Cupin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2170_N-acetyltransferase_activity,_and_Cupin_domain


id: CL:2179
description: Helix_turn_helix gluconate operon transcriptional repressor, and Carbon-sulfur lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2179_Helix_turn_helix_gluconate_operon_transcriptional_repressor,_and_Carbon-sulfur_lyase_activity


id: CL:2188
description: Mixed, incl. Bacterial nucleoid, and AhpC/TSA family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2188_Mixed,_incl._Bacterial_nucleoid,_and_AhpC/TSA_family


id: CL:2189
description: Bacterial nucleoid, and DNA-(apurinic or apyrimidinic site) endonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2189_Bacterial_nucleoid,_and_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: CL:2198
description: Mixed, incl. AhpC/TSA family, and Positive regulation of RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2198_Mixed,_incl._AhpC/TSA_family,_and_Positive_regulation_of_RNA_metabolic_process


id: CL:2207
description: Mixed, incl. Cellular detoxification, and E1-E2 ATPase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2207_Mixed,_incl._Cellular_detoxification,_and_E1-E2_ATPase


id: CL:2208
description: Mixed, incl. Cellular detoxification, and E1-E2 ATPase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2208_Mixed,_incl._Cellular_detoxification,_and_E1-E2_ATPase


id: CL:2209
description: Mixed, incl. Cellular detoxification, and Carbohydrate derivative transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2209_Mixed,_incl._Cellular_detoxification,_and_Carbohydrate_derivative_transport


id: CL:2210
description: Mixed, incl. Cellular detoxification, and Lipid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2210_Mixed,_incl._Cellular_detoxification,_and_Lipid_transport


id: CL:2212
description: Response to superoxide, and Disulfide bond
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2212_Response_to_superoxide,_and_Disulfide_bond


id: CL:2231
description: Mixed, incl. Peroxidase, and Lipid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2231_Mixed,_incl._Peroxidase,_and_Lipid_transport


id: CL:2241
description: Mixed, incl. Glycerolipid biosynthetic process, and Carbohydrate derivative transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2241_Mixed,_incl._Glycerolipid_biosynthetic_process,_and_Carbohydrate_derivative_transport


id: CL:2252
description: Mixed, incl. E1-E2 ATPase, and dGTP catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2252_Mixed,_incl._E1-E2_ATPase,_and_dGTP_catabolic_process


id: CL:2254
description: E1-E2 ATPase, and Heavy-metal-associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2254_E1-E2_ATPase,_and_Heavy-metal-associated_domain


id: CL:2274
description: Mixed, incl. Ferric iron binding, and NADPH-dependent FMN reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2274_Mixed,_incl._Ferric_iron_binding,_and_NADPH-dependent_FMN_reductase


id: CL:228
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:228_Structural_constituent_of_ribosome


id: CL:2292
description: Mixed, incl. Horizontal gene transfer, and Bacterial secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2292_Mixed,_incl._Horizontal_gene_transfer,_and_Bacterial_secretion_system


id: CL:2293
description: Mixed, incl. Horizontal gene transfer, and Bacterial secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2293_Mixed,_incl._Horizontal_gene_transfer,_and_Bacterial_secretion_system


id: CL:2295
description: Mixed, incl. Bacterial secretion system, and Salmonella virulence plasmid 65kDa B protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2295_Mixed,_incl._Bacterial_secretion_system,_and_Salmonella_virulence_plasmid_65kDa_B_protein


id: CL:2297
description: Secretion, and Aspartic-type peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2297_Secretion,_and_Aspartic-type_peptidase_activity


id: CL:2323
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2323_Mixed,_incl._Phage_derived_protein_Gp49-like_(DUF891),_and_Establishment_of_competence_for_transformation

description:
  Mixed, incl. Phage derived protein Gp49-like (DUF891), and Establishment of competence for transformation


id: CL:2335
description: Mixed, incl. Phosphate acyltransferases, and PEGA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2335_Mixed,_incl._Phosphate_acyltransferases,_and_PEGA_domain


id: CL:2351
description: Mixed, incl. Carbohydrate metabolic process, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2351_Mixed,_incl._Carbohydrate_metabolic_process,_and_Glycosyl_transferases_group_1


id: CL:2352
description: Mixed, incl. Carbohydrate metabolic process, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2352_Mixed,_incl._Carbohydrate_metabolic_process,_and_Glycosyl_transferases_group_1


id: CL:2353
description: Mixed, incl. Carbohydrate metabolic process, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2353_Mixed,_incl._Carbohydrate_metabolic_process,_and_Glycosyl_transferases_group_1


id: CL:2355
description: Mixed, incl. Carbohydrate metabolic process, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2355_Mixed,_incl._Carbohydrate_metabolic_process,_and_Glycosyl_transferases_group_1


id: CL:2356
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2356_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferases_group_1


id: CL:2358
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2358_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferases_group_1


id: CL:2359
description: Mixed, incl. Glycosyl transferases group 1, and Polyketide sugar unit biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2359_Mixed,_incl._Glycosyl_transferases_group_1,_and_Polyketide_sugar_unit_biosynthesis


id: CL:2360
description: Polyketide sugar unit biosynthesis, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2360_Polyketide_sugar_unit_biosynthesis,_and_Glycosyl_transferases_group_1


id: CL:2362
description: Nucleotide-sugar metabolic process, and MobA-like NTP transferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2362_Nucleotide-sugar_metabolic_process,_and_MobA-like_NTP_transferase_domain


id: CL:2364
description: Mixed, incl. MobA-like NTP transferase domain, and Ascorbate and aldarate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2364_Mixed,_incl._MobA-like_NTP_transferase_domain,_and_Ascorbate_and_aldarate_metabolism


id: CL:2391
description: Mixed, incl. Aminotransferase class-V, and Lipopolysaccharide core region metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2391_Mixed,_incl._Aminotransferase_class-V,_and_Lipopolysaccharide_core_region_metabolic_process


id: CL:2405
description: Mixed, incl. WxcM-like, C-terminal , and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2405_Mixed,_incl._WxcM-like,_C-terminal_,_and_Acetyltransferase_(GNAT)_domain


id: CL:2424
description: Mixed, incl. Galactose metabolic process, and Oxidoreductase family, NAD-binding Rossmann fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2424_Mixed,_incl._Galactose_metabolic_process,_and_Oxidoreductase_family,_NAD-binding_Rossmann_fold


id: CL:2426
description: Oxidoreductase family, C-terminal alpha/beta domain, and Xylose isomerase-like TIM barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2426_Oxidoreductase_family,_C-terminal_alpha/beta_domain,_and_Xylose_isomerase-like_TIM_barrel


id: CL:2438
description: Galactose metabolic process, and Aldose 1-epimerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2438_Galactose_metabolic_process,_and_Aldose_1-epimerase


id: CL:2447
description: Mixed, incl. Starch and sucrose metabolism, and Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2447_Mixed,_incl._Starch_and_sucrose_metabolism,_and_Chromosome_segregation


id: CL:2448
description: Mixed, incl. Chromosome segregation, and Hexokinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2448_Mixed,_incl._Chromosome_segregation,_and_Hexokinase


id: CL:2449
description: Mixed, incl. Hexokinase, and Chromate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2449_Mixed,_incl._Hexokinase,_and_Chromate_transport


id: CL:2451
description: Mixed, incl. N-acetylglucosamine metabolic process, and Hexokinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2451_Mixed,_incl._N-acetylglucosamine_metabolic_process,_and_Hexokinase


id: CL:2470
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2470_Mixed,_incl._Chromosome_segregation,_and_Domain_present_in_phytochromes_and_cGMP-specific_phosphodiesterases.

description:
  Mixed, incl. Chromosome segregation, and Domain present in phytochromes and cGMP-specific phosphodiesterases.


id: CL:2485
description: Glucan metabolic process, and Starch and sucrose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2485_Glucan_metabolic_process,_and_Starch_and_sucrose_metabolism


id: CL:2488
description: Glycogen metabolic process, and 1,4-alpha-oligoglucan phosphorylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2488_Glycogen_metabolic_process,_and_1,4-alpha-oligoglucan_phosphorylase_activity


id: CL:2504
description: Alpha-amylase domain, and Alpha amylase, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2504_Alpha-amylase_domain,_and_Alpha_amylase,_catalytic_domain


id: CL:251
description: RNA polymerase, and RadC-like JAB domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:251_RNA_polymerase,_and_RadC-like_JAB_domain


id: CL:2532
description: Mixed, incl. FAD binding, and CoA binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2532_Mixed,_incl._FAD_binding,_and_CoA_binding_domain


id: CL:2549
description: Mixed, incl. PP-loop family, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2549_Mixed,_incl._PP-loop_family,_and_DNA_replication


id: CL:2562
description: Mixed, incl. Folate biosynthesis, and CobW/HypB/UreG, nucleotide-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2562_Mixed,_incl._Folate_biosynthesis,_and_CobW/HypB/UreG,_nucleotide-binding_domain


id: CL:2564
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2564_Mixed,_incl._Pteridine-containing_compound_biosynthetic_process,_and_CobW/HypB/UreG,_nucleotide-binding_domain

description:
  Mixed, incl. Pteridine-containing compound biosynthetic process, and CobW/HypB/UreG, nucleotide-binding domain


id: CL:2566
description: Pteridine-containing compound biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2566_Pteridine-containing_compound_biosynthetic_process


id: CL:2581
description: Mixed, incl. dephospho-CoA kinase activity, and Cyclic nucleotide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2581_Mixed,_incl._dephospho-CoA_kinase_activity,_and_Cyclic_nucleotide_metabolic_process


id: CL:2601
description: Mixed, incl. Structural constituent of chromatin, and Thylakoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2601_Mixed,_incl._Structural_constituent_of_chromatin,_and_Thylakoid


id: CL:2610
description: Mixed, incl. Flavodoxin, and Iron-containing alcohol dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2610_Mixed,_incl._Flavodoxin,_and_Iron-containing_alcohol_dehydrogenase


id: CL:2611
description: Mixed, incl. Iron-containing alcohol dehydrogenase, and Degradation of aromatic compounds
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2611_Mixed,_incl._Iron-containing_alcohol_dehydrogenase,_and_Degradation_of_aromatic_compounds


id: CL:2613
description: 1-butanol metabolic process, and Degradation of aromatic compounds
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2613_1-butanol_metabolic_process,_and_Degradation_of_aromatic_compounds


id: CL:2625
description: Mixed, incl. Pyridoxine metabolic process, and Solute:proton symporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2625_Mixed,_incl._Pyridoxine_metabolic_process,_and_Solute:proton_symporter_activity


id: CL:2635
description: Flavodoxin, and Lactone biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2635_Flavodoxin,_and_Lactone_biosynthetic_process


id: CL:2653
description: Mixed, incl. BspA type Leucine rich repeat region (6 copies), and beta-Lactam resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2653_Mixed,_incl._BspA_type_Leucine_rich_repeat_region_(6_copies),_and_beta-Lactam_resistance


id: CL:2654
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2654_Mixed,_incl._BspA_type_Leucine_rich_repeat_region_(6_copies),_and_PD-(D/E)XK_nuclease_transposase_sub-family

description:
  Mixed, incl. BspA type Leucine rich repeat region (6 copies), and PD-(D/E)XK nuclease transposase sub-family


id: CL:2656
description: Mixed, incl. PD-(D/E)XK nuclease transposase sub-family, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2656_Mixed,_incl._PD-(D/E)XK_nuclease_transposase_sub-family,_and_Protein_transport


id: CL:2658
description: Mixed, incl. Protein transport, and ABC transporter transmembrane region
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2658_Mixed,_incl._Protein_transport,_and_ABC_transporter_transmembrane_region


id: CL:2659
description: Mixed, incl. Cell outer membrane, and MotA/TolQ/ExbB proton channel family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2659_Mixed,_incl._Cell_outer_membrane,_and_MotA/TolQ/ExbB_proton_channel_family


id: CL:2668
description: dephospho-CoA kinase activity, and ABC transporter transmembrane region
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2668_dephospho-CoA_kinase_activity,_and_ABC_transporter_transmembrane_region


id: CL:267
description: Ribosome biogenesis, and tRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:267_Ribosome_biogenesis,_and_tRNA_pseudouridine_synthesis


id: CL:2691
description: BspA type Leucine rich repeat region (6 copies), and EamA-like transporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2691_BspA_type_Leucine_rich_repeat_region_(6_copies),_and_EamA-like_transporter_family


id: CL:2695
description: BspA type Leucine rich repeat region (6 copies)
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2695_BspA_type_Leucine_rich_repeat_region_(6_copies)


id: CL:2715
description: Mixed, incl. AcrB/AcrD/AcrF family, and Outer membrane efflux protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2715_Mixed,_incl._AcrB/AcrD/AcrF_family,_and_Outer_membrane_efflux_protein


id: CL:2717
description: Mixed, incl. AcrB/AcrD/AcrF family, and Outer membrane efflux protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2717_Mixed,_incl._AcrB/AcrD/AcrF_family,_and_Outer_membrane_efflux_protein


id: CL:2719
description: Mixed, incl. AcrB/AcrD/AcrF family, and Biotin-lipoyl like
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2719_Mixed,_incl._AcrB/AcrD/AcrF_family,_and_Biotin-lipoyl_like


id: CL:2738
description: Outer membrane efflux protein, and Biotin-lipoyl like
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2738_Outer_membrane_efflux_protein,_and_Biotin-lipoyl_like


id: CL:2751
description: Mixed, incl. RNA methyltransferase domain, and Domain present in PSD-95, Dlg, and ZO-1/2.
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2751_Mixed,_incl._RNA_methyltransferase_domain,_and_Domain_present_in_PSD-95,_Dlg,_and_ZO-1/2.


id: CL:2762
description: Mixed, incl. Xenobiotic transport, and Other glycan degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2762_Mixed,_incl._Xenobiotic_transport,_and_Other_glycan_degradation


id: CL:2763
description: Mixed, incl. Xenobiotic transport, and DNA polymerase alpha chain like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2763_Mixed,_incl._Xenobiotic_transport,_and_DNA_polymerase_alpha_chain_like_domain


id: CL:2765
description: Xenobiotic transport, and DNA polymerase alpha chain like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2765_Xenobiotic_transport,_and_DNA_polymerase_alpha_chain_like_domain


id: CL:2767
description: MatE, and DNA polymerase alpha chain like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2767_MatE,_and_DNA_polymerase_alpha_chain_like_domain


id: CL:277
description: Translocation, and SRP54-type protein, GTPase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:277_Translocation,_and_SRP54-type_protein,_GTPase_domain


id: CL:2799
description: Mixed, incl. Bacterial antitoxin of type II TA system, VapB, and MatE
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2799_Mixed,_incl._Bacterial_antitoxin_of_type_II_TA_system,_VapB,_and_MatE


id: CL:2815
description: Mostly uncharacterized, incl. Chorismate mutase activity, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2815_Mostly_uncharacterized,_incl._Chorismate_mutase_activity,_and_Coenzyme_A_biosynthesis


id: CL:2816
description: Mixed, incl. Chorismate mutase activity, and Lytic endotransglycosylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2816_Mixed,_incl._Chorismate_mutase_activity,_and_Lytic_endotransglycosylase_activity


id: CL:2818
description: Chorismate mutase activity, and PIN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2818_Chorismate_mutase_activity,_and_PIN_domain


id: CL:2837
description: Mixed, incl. Coenzyme A biosynthesis, and HEAT repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2837_Mixed,_incl._Coenzyme_A_biosynthesis,_and_HEAT_repeats


id: CL:2839
description: Coenzyme A biosynthesis, and HEAT repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2839_Coenzyme_A_biosynthesis,_and_HEAT_repeats


id: CL:2856
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2856_Mostly_uncharacterized,_incl._Sulfatase-modifying_factor_enzyme_1,_and_Von_Willebrand_factor_(vWF)_type_A_domain

description:
  Mostly uncharacterized, incl. Sulfatase-modifying factor enzyme 1, and Von Willebrand factor (vWF) type A domain


id: CL:2857
description: Mixed, incl. Sulfatase-modifying factor enzyme 1, and Von Willebrand factor (vWF) type A domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2857_Mixed,_incl._Sulfatase-modifying_factor_enzyme_1,_and_Von_Willebrand_factor_(vWF)_type_A_domain


id: CL:2858
description: Mixed, incl. Sulfatase-modifying factor enzyme 1, and Von Willebrand factor (vWF) type A domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2858_Mixed,_incl._Sulfatase-modifying_factor_enzyme_1,_and_Von_Willebrand_factor_(vWF)_type_A_domain


id: CL:2859
description: Mixed, incl. Sulfatase-modifying factor enzyme 1, and Metal ion transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2859_Mixed,_incl._Sulfatase-modifying_factor_enzyme_1,_and_Metal_ion_transmembrane_transporter_activity


id: CL:2861
description: Mixed, incl. Sulfatase-modifying factor enzyme 1, and Metal ion transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2861_Mixed,_incl._Sulfatase-modifying_factor_enzyme_1,_and_Metal_ion_transmembrane_transporter_activity


id: CL:2862
description: Sulfatase-modifying factor enzyme 1, and N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase)
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2862_Sulfatase-modifying_factor_enzyme_1,_and_N-acylglucosamine_2-epimerase_(GlcNAc_2-epimerase)


id: CL:2866
description: Sulfatase-modifying factor enzyme 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2866_Sulfatase-modifying_factor_enzyme_1


id: CL:2887
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2887_Mixed,_incl._Metal_ion_transmembrane_transporter_activity,_and_ABC-type_uncharacterized_transport_system

description:
  Mixed, incl. Metal ion transmembrane transporter activity, and ABC-type uncharacterized transport system


id: CL:2889
description: Mixed, incl. ABC-type uncharacterized transport system, and ABC-type transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2889_Mixed,_incl._ABC-type_uncharacterized_transport_system,_and_ABC-type_transporter_activity


id: CL:2901
description: Metal ion transmembrane transporter activity, and Lipoprotein localization to membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2901_Metal_ion_transmembrane_transporter_activity,_and_Lipoprotein_localization_to_membrane


id: CL:2920
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2920_Mixed,_incl._Von_Willebrand_factor_(vWF)_type_A_domain,_and_Bacterial_regulatory_proteins,_tetR_family

description:
  Mixed, incl. Von Willebrand factor (vWF) type A domain, and Bacterial regulatory proteins, tetR family


id: CL:2924
description: Von Willebrand factor (vWF) type A domain, and Porphyrin and chlorophyll metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2924_Von_Willebrand_factor_(vWF)_type_A_domain,_and_Porphyrin_and_chlorophyll_metabolism


id: CL:2939
description: Bacterial regulatory proteins, tetR family, and tRNA 3-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2939_Bacterial_regulatory_proteins,_tetR_family,_and_tRNA_3-end_processing


id: CL:2953
description: Mixed, incl. Oxidoreductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2953_Mixed,_incl._Oxidoreductase_activity


id: CL:2969
description: Mixed, incl. SIS domain, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2969_Mixed,_incl._SIS_domain,_and_4Fe-4S_binding_domain


id: CL:2987
description: Mostly uncharacterized, incl. Peptidase family U32, and Modulation by Mtb of host immune system
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2987_Mostly_uncharacterized,_incl._Peptidase_family_U32,_and_Modulation_by_Mtb_of_host_immune_system


id: CL:2989
description: Mixed, incl. Modulation by Mtb of host immune system, and DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:2989_Mixed,_incl._Modulation_by_Mtb_of_host_immune_system,_and_DNA-binding_domain


id: CL:300
description: Mixed, incl. DEAD-like helicases superfamily, and mRNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:300_Mixed,_incl._DEAD-like_helicases_superfamily,_and_mRNA_metabolic_process


id: CL:3015
description: ABC transporters, and Latent infection - Other responses of Mtb to phagocytosis
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3015_ABC_transporters,_and_Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis


id: CL:302
description: RNA helicase activity, and mRNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:302_RNA_helicase_activity,_and_mRNA_catabolic_process


id: CL:3020
description: Mixed, incl. Amino acid transport, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3020_Mixed,_incl._Amino_acid_transport,_and_Peptide_transport


id: CL:3021
description: Mixed, incl. Transporter complex, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3021_Mixed,_incl._Transporter_complex,_and_Peptide_transport


id: CL:3022
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3022_Mixed,_incl._Peptide_transport,_and_Bacterial_extracellular_solute-binding_proteins,_family_5_Middle

description:
  Mixed, incl. Peptide transport, and Bacterial extracellular solute-binding proteins, family 5 Middle


id: CL:3024
description: Peptide transport, and Bacterial extracellular solute-binding proteins, family 5 Middle
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3024_Peptide_transport,_and_Bacterial_extracellular_solute-binding_proteins,_family_5_Middle


id: CL:3026
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3026_Oligopeptide/dipeptide_transporter,_C-terminal_region,_and_N-terminal_TM_domain_of_oligopeptide_transport_permease_C

description:
  Oligopeptide/dipeptide transporter, C-terminal region, and N-terminal TM domain of oligopeptide transport permease C


id: CL:3043
description: Peptide transport, and N-terminal TM domain of oligopeptide transport permease C
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3043_Peptide_transport,_and_N-terminal_TM_domain_of_oligopeptide_transport_permease_C


id: CL:3058
description: ABC-type amino acid transporter activity, and Transporter complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3058_ABC-type_amino_acid_transporter_activity,_and_Transporter_complex


id: CL:3069
description: Polyamine transport, and ABC-type polyamine transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3069_Polyamine_transport,_and_ABC-type_polyamine_transporter_activity


id: CL:3079
description: Branched-chain amino acid transport, and Periplasmic binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3079_Branched-chain_amino_acid_transport,_and_Periplasmic_binding_protein_domain


id: CL:3080
description: Branched-chain amino acid transport, and Periplasmic binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3080_Branched-chain_amino_acid_transport,_and_Periplasmic_binding_protein_domain


id: CL:3089
description: Branched-chain amino acid transport, and Branched-chain amino acid ATP-binding cassette transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3089_Branched-chain_amino_acid_transport,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter


id: CL:3098
description: Branched-chain amino acid transport, and Branched-chain amino acid ATP-binding cassette transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3098_Branched-chain_amino_acid_transport,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter


id: CL:3108
description: Mixed, incl. Iron ion homeostasis, and TOBE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3108_Mixed,_incl._Iron_ion_homeostasis,_and_TOBE_domain


id: CL:3110
description: Mixed, incl. Bacterial extracellular solute-binding protein, and TOBE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3110_Mixed,_incl._Bacterial_extracellular_solute-binding_protein,_and_TOBE_domain


id: CL:3112
description: Mixed, incl. Bacterial extracellular solute-binding protein, and TOBE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3112_Mixed,_incl._Bacterial_extracellular_solute-binding_protein,_and_TOBE_domain


id: CL:3150
description: Mixed, incl. Metal ion transport, and ABC 3 transport family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3150_Mixed,_incl._Metal_ion_transport,_and_ABC_3_transport_family


id: CL:3152
description: Mixed, incl. Zinc ion transport, and ABC 3 transport family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3152_Mixed,_incl._Zinc_ion_transport,_and_ABC_3_transport_family


id: CL:3154
description: Zinc ion transport, and ABC 3 transport family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3154_Zinc_ion_transport,_and_ABC_3_transport_family


id: CL:3176
description: Tetrapyrrole binding, and FecCD transport family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3176_Tetrapyrrole_binding,_and_FecCD_transport_family


id: CL:3191
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3191_Binding-protein-dependent_transport_system_inner_membrane_component,_and_Bacterial_extracellular_solute-binding_protein

description:
  Binding-protein-dependent transport system inner membrane component, and Bacterial extracellular solute-binding protein


id: CL:3192
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3192_Binding-protein-dependent_transport_system_inner_membrane_component,_and_Bacterial_extracellular_solute-binding_protein

description:
  Binding-protein-dependent transport system inner membrane component, and Bacterial extracellular solute-binding protein


id: CL:3194
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3194_Mixed,_incl._Carbohydrate_transmembrane_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein

description:
  Mixed, incl. Carbohydrate transmembrane transporter activity, and Bacterial extracellular solute-binding protein


id: CL:3195
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3195_Mixed,_incl._Carbohydrate_transmembrane_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein

description:
  Mixed, incl. Carbohydrate transmembrane transporter activity, and Bacterial extracellular solute-binding protein


id: CL:3197
description: Carbohydrate transmembrane transporter activity, and Carbohydrate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3197_Carbohydrate_transmembrane_transporter_activity,_and_Carbohydrate_transport


id: CL:3199
description: Carbohydrate transmembrane transporter activity, and Carbohydrate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3199_Carbohydrate_transmembrane_transporter_activity,_and_Carbohydrate_transport


id: CL:323
description: Mixed, incl. Protein carrier chaperone, and This domain is found at the N-terminus of jag proteins.
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:323_Mixed,_incl._Protein_carrier_chaperone,_and_This_domain_is_found_at_the_N-terminus_of_jag_proteins.


id: CL:3238
description: Bacterial extracellular solute-binding protein, and TOBE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3238_Bacterial_extracellular_solute-binding_protein,_and_TOBE_domain


id: CL:3261
description: Bacterial extracellular solute-binding protein, and ABC-type maltose transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3261_Bacterial_extracellular_solute-binding_protein,_and_ABC-type_maltose_transporter_activity


id: CL:3271
description: Mixed, incl. Sulfur metabolism, and Crp-like helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3271_Mixed,_incl._Sulfur_metabolism,_and_Crp-like_helix-turn-helix_domain


id: CL:3272
description: Mixed, incl. Sulfur metabolism, and PD-(D/E)XK nuclease transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3272_Mixed,_incl._Sulfur_metabolism,_and_PD-(D/E)XK_nuclease_transposase_sub-family


id: CL:3285
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3285_Mixed,_incl._Crp-like_helix-turn-helix_domain,_and_ABC_transporter,_phosphonate,_periplasmic_substrate-binding_protein

description:
  Mixed, incl. Crp-like helix-turn-helix domain, and ABC transporter, phosphonate, periplasmic substrate-binding protein


id: CL:3299
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3299_Mixed,_incl._ABC-type_phosphonate_transporter_activity,_and_Anaerobic_ribonucleoside-triphosphate_reductase

description:
  Mixed, incl. ABC-type phosphonate transporter activity, and Anaerobic ribonucleoside-triphosphate reductase


id: CL:3300
description: Mixed, incl. Anaerobic ribonucleoside-triphosphate reductase, and Vitamin transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3300_Mixed,_incl._Anaerobic_ribonucleoside-triphosphate_reductase,_and_Vitamin_transport


id: CL:3302
description: Vitamin transport, and ATPases associated with a variety of cellular activities
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3302_Vitamin_transport,_and_ATPases_associated_with_a_variety_of_cellular_activities


id: CL:3320
description: ABC-type phosphonate transporter activity, and Glucosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3320_ABC-type_phosphonate_transporter_activity,_and_Glucosyltransferase_activity


id: CL:3336
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3336_Mixed,_incl._Carbohydrate_transport,_and_Branched-chain_amino_acid_transport_system_/_permease_component

description:
  Mixed, incl. Carbohydrate transport, and Branched-chain amino acid transport system / permease component


id: CL:3338
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3338_Mixed,_incl._Periplasmic_binding_protein_domain,_and_Branched-chain_amino_acid_transport_system_/_permease_component

description:
  Mixed, incl. Periplasmic binding protein domain, and Branched-chain amino acid transport system / permease component


id: CL:3339
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3339_Mixed,_incl._Periplasmic_binding_protein_domain,_and_Branched-chain_amino_acid_transport_system_/_permease_component

description:
  Mixed, incl. Periplasmic binding protein domain, and Branched-chain amino acid transport system / permease component


id: CL:3341
description: Carbohydrate transport, and Branched-chain amino acid transport system / permease component
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3341_Carbohydrate_transport,_and_Branched-chain_amino_acid_transport_system_/_permease_component


id: CL:3343
description: Mixed, incl. Periplasmic binding protein domain, and ABC transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3343_Mixed,_incl._Periplasmic_binding_protein_domain,_and_ABC_transporter


id: CL:336
description: Aminoacyl-tRNA synthetase, and glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:336_Aminoacyl-tRNA_synthetase,_and_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: CL:3384
description: Mixed, incl. DeoC/LacD family aldolase, and Cupin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3384_Mixed,_incl._DeoC/LacD_family_aldolase,_and_Cupin_domain


id: CL:3403
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3403_ABC_transporter_substrate-binding_protein_PnrA-like,_and_Branched-chain_amino_acid_transport_system_/_permease_component

description:
  ABC transporter substrate-binding protein PnrA-like, and Branched-chain amino acid transport system / permease component


id: CL:3421
description: Mixed, incl. Mtb iron assimilation by chelation, and Bacterial regulatory proteins, tetR family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3421_Mixed,_incl._Mtb_iron_assimilation_by_chelation,_and_Bacterial_regulatory_proteins,_tetR_family


id: CL:3423
description: Mixed, incl. Mtb iron assimilation by chelation, and Bacterial regulatory proteins, tetR family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3423_Mixed,_incl._Mtb_iron_assimilation_by_chelation,_and_Bacterial_regulatory_proteins,_tetR_family


id: CL:3425
description: Mtb iron assimilation by chelation, and Leucine carboxyl methyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3425_Mtb_iron_assimilation_by_chelation,_and_Leucine_carboxyl_methyltransferase


id: CL:3426
description: Mtb iron assimilation by chelation, and Leucine carboxyl methyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3426_Mtb_iron_assimilation_by_chelation,_and_Leucine_carboxyl_methyltransferase


id: CL:3429
description: Mtb iron assimilation by chelation, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3429_Mtb_iron_assimilation_by_chelation,_and_Sulfur_metabolism


id: CL:343
description: Anticodon-binding domain of tRNA ligase, and Aminoacyl-tRNA editing domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:343_Anticodon-binding_domain_of_tRNA_ligase,_and_Aminoacyl-tRNA_editing_domain


id: CL:3449
description: Mtb iron assimilation by chelation, and Transporter complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3449_Mtb_iron_assimilation_by_chelation,_and_Transporter_complex


id: CL:3461
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3461_Mixed,_incl._Hemerythrin_HHE_cation_binding_domain,_and_Bacterial_antitoxin_of_type_II_TA_system,_VapB

description:
  Mixed, incl. Hemerythrin HHE cation binding domain, and Bacterial antitoxin of type II TA system, VapB


id: CL:3477
description: Mixed, incl. rRNA methyltransferase activity, and Lipid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3477_Mixed,_incl._rRNA_methyltransferase_activity,_and_Lipid_catabolic_process


id: CL:3478
description: Mixed, incl. Lipid catabolic process, and Leucyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3478_Mixed,_incl._Lipid_catabolic_process,_and_Leucyltransferase_activity


id: CL:3487
description: rRNA methyltransferase activity, and Bacterial regulatory proteins, tetR family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3487_rRNA_methyltransferase_activity,_and_Bacterial_regulatory_proteins,_tetR_family


id: CL:3496
description: Mixed, incl. Homoserine metabolic process, and Metallopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3496_Mixed,_incl._Homoserine_metabolic_process,_and_Metallopeptidase_activity


id: CL:3498
description: Mixed, incl. Homoserine metabolic process, and NlpA lipoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3498_Mixed,_incl._Homoserine_metabolic_process,_and_NlpA_lipoprotein


id: CL:3499
description: NlpA lipoprotein, and Amino-acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3499_NlpA_lipoprotein,_and_Amino-acid_transport


id: CL:3510
description: Homoserine metabolic process, and Pyridoxal-phosphate dependent enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3510_Homoserine_metabolic_process,_and_Pyridoxal-phosphate_dependent_enzyme


id: CL:3528
description: Aminopeptidase activity, and Long-chain fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3528_Aminopeptidase_activity,_and_Long-chain_fatty_acid_metabolic_process


id: CL:3539
description: Mostly uncharacterized, incl. Nitroreductase family, and CAAX-box protein maturation
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3539_Mostly_uncharacterized,_incl._Nitroreductase_family,_and_CAAX-box_protein_maturation


id: CL:3541
description: Mixed, incl. Nitroreductase family, and CAAX-box protein maturation
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3541_Mixed,_incl._Nitroreductase_family,_and_CAAX-box_protein_maturation


id: CL:3543
description: Mixed, incl. CAAX-box protein maturation, and Nitroreductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3543_Mixed,_incl._CAAX-box_protein_maturation,_and_Nitroreductase_family


id: CL:3562
description: Mixed, incl. Calcineurin-like phosphoesterase, and Alpha amylase, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3562_Mixed,_incl._Calcineurin-like_phosphoesterase,_and_Alpha_amylase,_catalytic_domain


id: CL:3580
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3580_Mixed,_incl._Domain_of_unknown_function_(DUF2715),_and_Helix_turn_helix_multiple_antibiotic_resistance_protein

description:
  Mixed, incl. Domain of unknown function (DUF2715), and Helix_turn_helix multiple antibiotic resistance protein


id: CL:3591
description: Mixed, incl. Bacterial extracellular solute-binding protein, family 7, and Metal cluster binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3591_Mixed,_incl._Bacterial_extracellular_solute-binding_protein,_family_7,_and_Metal_cluster_binding


id: CL:3593
description: Mixed, incl. Electron transport chain, and Methane metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3593_Mixed,_incl._Electron_transport_chain,_and_Methane_metabolism


id: CL:3594
description: Mixed, incl. Electron transport, and Electron transfer activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3594_Mixed,_incl._Electron_transport,_and_Electron_transfer_activity


id: CL:3595
description: Electron transport, and Electron transfer activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3595_Electron_transport,_and_Electron_transfer_activity


id: CL:3598
description: Electron transport, and Electron transfer activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3598_Electron_transport,_and_Electron_transfer_activity


id: CL:3616
description: Peroxidase activity, and Transmembrane helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3616_Peroxidase_activity,_and_Transmembrane_helix


id: CL:3628
description: Mixed, incl. Lactate oxidation, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3628_Mixed,_incl._Lactate_oxidation,_and_4Fe-4S_dicluster_domain


id: CL:3631
description: Lactate oxidation, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3631_Lactate_oxidation,_and_4Fe-4S_dicluster_domain


id: CL:3653
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3653_Mixed,_incl._Bacterial_extracellular_solute-binding_protein,_family_7,_and_Tripartite_ATP-independent_periplasmic_transporters,_DctQ_component

description:
  Mixed, incl. Bacterial extracellular solute-binding protein, family 7, and Tripartite ATP-independent periplasmic transporters, DctQ component


id: CL:3654
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3654_Bacterial_extracellular_solute-binding_protein,_family_7,_and_Tripartite_ATP-independent_periplasmic_transporters,_DctQ_component

description:
  Bacterial extracellular solute-binding protein, family 7, and Tripartite ATP-independent periplasmic transporters, DctQ component


id: CL:3656
description: Receptor, and Tripartite ATP-independent periplasmic transporters, DctQ component
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3656_Receptor,_and_Tripartite_ATP-independent_periplasmic_transporters,_DctQ_component


id: CL:3658
description: Receptor, and Tripartite ATP-independent periplasmic transporters, DctQ component
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3658_Receptor,_and_Tripartite_ATP-independent_periplasmic_transporters,_DctQ_component


id: CL:3693
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3693_Mixed,_incl._Glycerophosphoryl_diester_phosphodiesterase_family,_and_Pyridine_nucleotide-disulphide_oxidoreductase

description:
  Mixed, incl. Glycerophosphoryl diester phosphodiesterase family, and Pyridine nucleotide-disulphide oxidoreductase


id: CL:3707
description: Mixed, incl. Two-component system, and Lipid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3707_Mixed,_incl._Two-component_system,_and_Lipid_biosynthetic_process


id: CL:3708
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3708_Mostly_uncharacterized,_incl._Tripartite_tricarboxylate_transporter_TctA_family,_and_Tripartite_tricarboxylate_transporter_TctB_family

description:
  Mostly uncharacterized, incl. Tripartite tricarboxylate transporter TctA family, and Tripartite tricarboxylate transporter TctB family


id: CL:3709
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3709_Mixed,_incl._Tripartite_tricarboxylate_transporter_TctA_family,_and_Tripartite_tricarboxylate_transporter_TctB_family

description:
  Mixed, incl. Tripartite tricarboxylate transporter TctA family, and Tripartite tricarboxylate transporter TctB family


id: CL:3712
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3712_Mixed,_incl._Tripartite_tricarboxylate_transporter_TctA_family,_and_Tripartite_tricarboxylate_transporter_TctB_family

description:
  Mixed, incl. Tripartite tricarboxylate transporter TctA family, and Tripartite tricarboxylate transporter TctB family


id: CL:3713
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3713_Tripartite_tricarboxylate_transporter_TctA_family,_and_Tripartite_tricarboxylate_transporter_TctB_family

description:
  Tripartite tricarboxylate transporter TctA family, and Tripartite tricarboxylate transporter TctB family


id: CL:3724
description: Mixed, incl. tRNA 3-end processing, and Tripartite tricarboxylate transporter TctA family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3724_Mixed,_incl._tRNA_3-end_processing,_and_Tripartite_tricarboxylate_transporter_TctA_family


id: CL:3739
description: Mixed, incl. Histidine kinase, and Helix_turn_helix, arabinose operon control protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3739_Mixed,_incl._Histidine_kinase,_and_Helix_turn_helix,_arabinose_operon_control_protein


id: CL:3741
description: Histidine kinase, and Helix_turn_helix, arabinose operon control protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3741_Histidine_kinase,_and_Helix_turn_helix,_arabinose_operon_control_protein


id: CL:376
description: Mixed, incl. 50S ribosome-binding GTPase, and Queuosine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:376_Mixed,_incl._50S_ribosome-binding_GTPase,_and_Queuosine_biosynthesis


id: CL:3761
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3761_Mixed,_incl._Mandelate_racemase_/_muconate_lactonizing_enzyme,_C-terminal_domain,_and_ABC_transporter_transmembrane_region

description:
  Mixed, incl. Mandelate racemase / muconate lactonizing enzyme, C-terminal domain, and ABC transporter transmembrane region


id: CL:3763
description: Mixed, incl. Ammonia ligase activity, and HicA toxin of bacterial toxin-antitoxin,
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3763_Mixed,_incl._Ammonia_ligase_activity,_and_HicA_toxin_of_bacterial_toxin-antitoxin,


id: CL:377
description: Mixed, incl. 50S ribosome-binding GTPase, and Alditol phosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:377_Mixed,_incl._50S_ribosome-binding_GTPase,_and_Alditol_phosphate_metabolic_process


id: CL:3778
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3778_Mixed,_incl._Bacterial_transcriptional_regulator,_and_Mandelate_racemase_/_muconate_lactonizing_enzyme,_C-terminal_domain

description:
  Mixed, incl. Bacterial transcriptional regulator, and Mandelate racemase / muconate lactonizing enzyme, C-terminal domain


id: CL:3799
description: Mixed, incl. Glycosyl transferase family 8, and Phosphate acyltransferases
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3799_Mixed,_incl._Glycosyl_transferase_family_8,_and_Phosphate_acyltransferases


id: CL:3802
description: Glycosyl transferase family 8, and Phosphate acyltransferases
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3802_Glycosyl_transferase_family_8,_and_Phosphate_acyltransferases


id: CL:3825
description: Base excision repair, and Transmembrane helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3825_Base_excision_repair,_and_Transmembrane_helix


id: CL:3843
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3843_Mixed,_incl._Negative_regulation_of_RNA_biosynthetic_process,_and_Butirosin_biosynthesis_protein_H,_N-terminal

description:
  Mixed, incl. Negative regulation of RNA biosynthetic process, and Butirosin biosynthesis protein H, N-terminal


id: CL:3845
description: Mixed, incl. Negative regulation of RNA biosynthetic process, and Sigma factor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3845_Mixed,_incl._Negative_regulation_of_RNA_biosynthetic_process,_and_Sigma_factor_activity


id: CL:3864
description: Butirosin biosynthesis protein H, N-terminal, and D-amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3864_Butirosin_biosynthesis_protein_H,_N-terminal,_and_D-amino_acid_metabolic_process


id: CL:388
description: Mixed, incl. Queuosine biosynthesis, and Septation
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:388_Mixed,_incl._Queuosine_biosynthesis,_and_Septation


id: CL:3880
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3880_Mostly_uncharacterized,_incl._Secondary_active_transmembrane_transporter_activity,_and_Transposase_activity

description:
  Mostly uncharacterized, incl. Secondary active transmembrane transporter activity, and Transposase activity


id: CL:3881
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3881_Mostly_uncharacterized,_incl._Transposase_activity,_and_Cellular_modified_amino_acid_biosynthetic_process

description:
  Mostly uncharacterized, incl. Transposase activity, and Cellular modified amino acid biosynthetic process


id: CL:3883
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3883_Mostly_uncharacterized,_incl._Pantothenate_metabolic_process,_and_GDSL-like_Lipase/Acylhydrolase_family

description:
  Mostly uncharacterized, incl. Pantothenate metabolic process, and GDSL-like Lipase/Acylhydrolase family


id: CL:3884
description: Mixed, incl. ABC transporter substrate binding protein, and FecR protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3884_Mixed,_incl._ABC_transporter_substrate_binding_protein,_and_FecR_protein


id: CL:3886
description: Mixed, incl. FecR protein, and GDSL-like Lipase/Acylhydrolase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3886_Mixed,_incl._FecR_protein,_and_GDSL-like_Lipase/Acylhydrolase_family


id: CL:3900
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3900_ABC_transporter_substrate_binding_protein,_and_Branched-chain_amino_acid_transport_system_/_permease_component

description:
  ABC transporter substrate binding protein, and Branched-chain amino acid transport system / permease component


id: CL:3913
description: Mixed, incl. HxlR-like helix-turn-helix, and GDSL-like Lipase/Acylhydrolase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3913_Mixed,_incl._HxlR-like_helix-turn-helix,_and_GDSL-like_Lipase/Acylhydrolase_family


id: CL:3933
description: Mixed, incl. Transposase activity, and Poly A polymerase head domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3933_Mixed,_incl._Transposase_activity,_and_Poly_A_polymerase_head_domain


id: CL:3935
description: Mixed, incl. Negative regulation of growth, and Subtilase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3935_Mixed,_incl._Negative_regulation_of_growth,_and_Subtilase_family


id: CL:3937
description: Mixed, incl. Subtilase family, and Tetrahydrofolate interconversion
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3937_Mixed,_incl._Subtilase_family,_and_Tetrahydrofolate_interconversion


id: CL:3949
description: Negative regulation of growth, and Endonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3949_Negative_regulation_of_growth,_and_Endonuclease_activity


id: CL:3973
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3973_Mixed,_incl._Secondary_active_transmembrane_transporter_activity,_and_Bacterial_capsule_synthesis_protein_PGA_cap

description:
  Mixed, incl. Secondary active transmembrane transporter activity, and Bacterial capsule synthesis protein PGA_cap


id: CL:3975
description: Secondary active transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3975_Secondary_active_transmembrane_transporter_activity


id: CL:399
description: Mixed, incl. Protein folding, and Protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:399_Mixed,_incl._Protein_folding,_and_Protein_catabolic_process


id: CL:3999
description: Mostly uncharacterized, incl. Mycolic acid cyclopropane synthetase, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:3999_Mostly_uncharacterized,_incl._Mycolic_acid_cyclopropane_synthetase,_and_Methyltransferase_domain


id: CL:400
description: Protein folding, and Protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:400_Protein_folding,_and_Protein_catabolic_process


id: CL:4000
description: Mostly uncharacterized, incl. Mycolic acid cyclopropane synthetase, and Subtilase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4000_Mostly_uncharacterized,_incl._Mycolic_acid_cyclopropane_synthetase,_and_Subtilase_family


id: CL:4002
description: Mixed, incl. Mycolic acid cyclopropane synthetase, and Subtilase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4002_Mixed,_incl._Mycolic_acid_cyclopropane_synthetase,_and_Subtilase_family


id: CL:4003
description: Mixed, incl. Mycolic acid cyclopropane synthetase, and Cytokinetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4003_Mixed,_incl._Mycolic_acid_cyclopropane_synthetase,_and_Cytokinetic_process


id: CL:4014
description: Mixed, incl. Subtilase family, and Mycolic acid cyclopropane synthetase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4014_Mixed,_incl._Subtilase_family,_and_Mycolic_acid_cyclopropane_synthetase


id: CL:402
description: Protein folding, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:402_Protein_folding,_and_ATP-dependent_peptidase_activity


id: CL:4038
description: Mixed, incl. Bacterial SH3 domain, and Lipoprotein biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4038_Mixed,_incl._Bacterial_SH3_domain,_and_Lipoprotein_biosynthetic_process


id: CL:4054
description: Mostly uncharacterized, incl. N-acetyltransferase activity, and Pyridoxamine 5-phosphate oxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4054_Mostly_uncharacterized,_incl._N-acetyltransferase_activity,_and_Pyridoxamine_5-phosphate_oxidase


id: CL:4055
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4055_Mostly_uncharacterized,_incl._Pyridoxamine_5-phosphate_oxidase,_and_Negative_regulation_of_hydrolase_activity

description:
  Mostly uncharacterized, incl. Pyridoxamine 5-phosphate oxidase, and Negative regulation of hydrolase activity


id: CL:4057
description: Mixed, incl. Pyridoxamine 5-phosphate oxidase, and Negative regulation of hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4057_Mixed,_incl._Pyridoxamine_5-phosphate_oxidase,_and_Negative_regulation_of_hydrolase_activity


id: CL:4059
description: Pyridoxamine 5-phosphate oxidase, and HxlR-like helix-turn-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4059_Pyridoxamine_5-phosphate_oxidase,_and_HxlR-like_helix-turn-helix


id: CL:406
description: Protein folding chaperone, and Chaperone binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:406_Protein_folding_chaperone,_and_Chaperone_binding


id: CL:4083
description: Mixed, incl. Alpha/beta hydrolase fold, and Membrane transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4083_Mixed,_incl._Alpha/beta_hydrolase_fold,_and_Membrane_transport_protein


id: CL:4098
description: Mixed, incl. N-acetyltransferase activity, and Anion-transporting ATPase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4098_Mixed,_incl._N-acetyltransferase_activity,_and_Anion-transporting_ATPase


id: CL:4100
description: Mixed, incl. Anion-transporting ATPase, and CAAX-box protein maturation
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4100_Mixed,_incl._Anion-transporting_ATPase,_and_CAAX-box_protein_maturation


id: CL:4116
description: N-acetyltransferase activity, and Nicotinate and nicotinamide metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4116_N-acetyltransferase_activity,_and_Nicotinate_and_nicotinamide_metabolism


id: CL:4126
description: Mostly uncharacterized, incl. Acid phosphatase activity, and Hemerythrin HHE cation binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4126_Mostly_uncharacterized,_incl._Acid_phosphatase_activity,_and_Hemerythrin_HHE_cation_binding_domain


id: CL:4128
description: Mixed, incl. Hemerythrin HHE cation binding domain, and ATP cone domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4128_Mixed,_incl._Hemerythrin_HHE_cation_binding_domain,_and_ATP_cone_domain


id: CL:4148
description: Mixed, incl. AAA domain, and RQC complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4148_Mixed,_incl._AAA_domain,_and_RQC_complex


id: CL:4151
description: RQC complex, and Response to radiation
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4151_RQC_complex,_and_Response_to_radiation


id: CL:4169
description: Mixed, incl. Aminoacyl-tRNA editing domain, and Calcineurin-like phosphoesterase superfamily domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4169_Mixed,_incl._Aminoacyl-tRNA_editing_domain,_and_Calcineurin-like_phosphoesterase_superfamily_domain


id: CL:4178
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4178_Mostly_uncharacterized,_incl._Toxin-antitoxin_complex,_and_Hydrolase_activity,_acting_on_ester_bonds

description:
  Mostly uncharacterized, incl. Toxin-antitoxin complex, and Hydrolase activity, acting on ester bonds


id: CL:4179
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4179_Mostly_uncharacterized,_incl._Toxin-antitoxin_complex,_and_This_entry_represents_the_core_domain_of_the_ferrous_iron_(Fe2+)_transport_protein_FeoA_found_in_bacteria._This_domain_also_occurs_at_the_C-terminus_in_related_proteins._The_transporter_Feo_is_composed_of_three_proteins:_FeoA_a_small,_soluble_...

description:
  Mostly uncharacterized, incl. Toxin-antitoxin complex, and This entry represents the core domain of the ferrous iron (Fe2+) transport protein FeoA found in bacteria. This domain also occurs at the C-terminus in related proteins. The transporter Feo is composed of three proteins: FeoA a small, soluble ...


id: CL:4180
description: Mixed, incl. Toxin-antitoxin complex, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4180_Mixed,_incl._Toxin-antitoxin_complex,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:4181
description: Mixed, incl. Toxin-antitoxin complex, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4181_Mixed,_incl._Toxin-antitoxin_complex,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:4182
description: Mixed, incl. Toxin-antitoxin complex, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4182_Mixed,_incl._Toxin-antitoxin_complex,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:4183
description: Mixed, incl. Toxin-antitoxin complex, and Membrane assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4183_Mixed,_incl._Toxin-antitoxin_complex,_and_Membrane_assembly


id: CL:4211
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4211_Mixed,_incl._Family_of_unknown_function_(DUF5312),_and_Regulation_of_cellular_component_organization

description:
  Mixed, incl. Family of unknown function (DUF5312), and Regulation of cellular component organization


id: CL:4220
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4220_Mostly_uncharacterized,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Ammonia_ligase_activity

description:
  Mostly uncharacterized, incl. Helix-turn-helix XRE-family like proteins, and Ammonia ligase activity


id: CL:4221
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4221_Mostly_uncharacterized,_incl._Salmonella_virulence_plasmid_65kDa_B_protein,_and_Helix-turn-helix_XRE-family_like_proteins

description:
  Mostly uncharacterized, incl. Salmonella virulence plasmid 65kDa B protein, and Helix-turn-helix XRE-family like proteins


id: CL:4224
description: Cell outer membrane, and Transmembrane helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4224_Cell_outer_membrane,_and_Transmembrane_helix


id: CL:4244
description: Mixed, incl. Ammonia ligase activity, and Sodium Bile acid symporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4244_Mixed,_incl._Ammonia_ligase_activity,_and_Sodium_Bile_acid_symporter_family


id: CL:4255
description: TPM domain, and Protein ubiquitination
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4255_TPM_domain,_and_Protein_ubiquitination


id: CL:4264
description: Mostly uncharacterized, incl. YcxB-like protein, and DNA methylation on adenine
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4264_Mostly_uncharacterized,_incl._YcxB-like_protein,_and_DNA_methylation_on_adenine


id: CL:4265
description: Mostly uncharacterized, incl. YcxB-like protein, and DNA methylation on adenine
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4265_Mostly_uncharacterized,_incl._YcxB-like_protein,_and_DNA_methylation_on_adenine


id: CL:4266
description: Mixed, incl. YcxB-like protein, and ParE toxin of type II toxin-antitoxin system, parDE
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4266_Mixed,_incl._YcxB-like_protein,_and_ParE_toxin_of_type_II_toxin-antitoxin_system,_parDE


id: CL:427
description: Peptidase complex, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:427_Peptidase_complex,_and_ATP-dependent_peptidase_activity


id: CL:4277
description: Mixed, incl. DNA methylation on adenine, and DNA geometric change
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4277_Mixed,_incl._DNA_methylation_on_adenine,_and_DNA_geometric_change


id: CL:4287
description: SEC-C motif, and Transmembrane helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4287_SEC-C_motif,_and_Transmembrane_helix


id: CL:4301
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4301_Mixed,_incl._This_entry_represents_the_core_domain_of_the_ferrous_iron_(Fe2+)_transport_protein_FeoA_found_in_bacteria._This_domain_also_occurs_at_the_C-terminus_in_related_proteins._The_transporter_Feo_is_composed_of_three_proteins:_FeoA_a_small,_soluble_...,_and_Nucleoside_recognition

description:
  Mixed, incl. This entry represents the core domain of the ferrous iron (Fe2+) transport protein FeoA found in bacteria. This domain also occurs at the C-terminus in related proteins. The transporter Feo is composed of three proteins: FeoA a small, soluble ..., and Nucleoside recognition


id: CL:4302
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4302_Mixed,_incl._This_entry_represents_the_core_domain_of_the_ferrous_iron_(Fe2+)_transport_protein_FeoA_found_in_bacteria._This_domain_also_occurs_at_the_C-terminus_in_related_proteins._The_transporter_Feo_is_composed_of_three_proteins:_FeoA_a_small,_soluble_...,_and_Nucleoside_recognition

description:
  Mixed, incl. This entry represents the core domain of the ferrous iron (Fe2+) transport protein FeoA found in bacteria. This domain also occurs at the C-terminus in related proteins. The transporter Feo is composed of three proteins: FeoA a small, soluble ..., and Nucleoside recognition


id: CL:4304
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4304_This_entry_represents_the_core_domain_of_the_ferrous_iron_(Fe2+)_transport_protein_FeoA_found_in_bacteria._This_domain_also_occurs_at_the_C-terminus_in_related_proteins._The_transporter_Feo_is_composed_of_three_proteins:_FeoA_a_small,_soluble_...,_and_Nucleoside_recognition

description:
  This entry represents the core domain of the ferrous iron (Fe2+) transport protein FeoA found in bacteria. This domain also occurs at the C-terminus in related proteins. The transporter Feo is composed of three proteins: FeoA a small, soluble ..., and Nucleoside recognition


id: CL:4318
description: Mixed, incl. Memo-like protein, and DNA alkylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4318_Mixed,_incl._Memo-like_protein,_and_DNA_alkylation


id: CL:4327
description: Mixed, incl. Trypsin-like peptidase domain, and Quorum sensing
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4327_Mixed,_incl._Trypsin-like_peptidase_domain,_and_Quorum_sensing


id: CL:4340
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4340_Mixed,_incl._Ribonuclease_toxin,_BrnT,_of_type_II_toxin-antitoxin_system,_and_BrnA_antitoxin_of_type_II_toxin-antitoxin_system

description:
  Mixed, incl. Ribonuclease toxin, BrnT, of type II toxin-antitoxin system, and BrnA antitoxin of type II toxin-antitoxin system


id: CL:4341
description: Mixed, incl. Antitoxin Phd_YefM, type II toxin-antitoxin system, and PIN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4341_Mixed,_incl._Antitoxin_Phd_YefM,_type_II_toxin-antitoxin_system,_and_PIN_domain


id: CL:4343
description: Antitoxin Phd_YefM, type II toxin-antitoxin system, and PIN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4343_Antitoxin_Phd_YefM,_type_II_toxin-antitoxin_system,_and_PIN_domain


id: CL:4357
description: Mixed, incl. HAD-hyrolase-like, and Cytidylate kinase-like family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4357_Mixed,_incl._HAD-hyrolase-like,_and_Cytidylate_kinase-like_family


id: CL:4371
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4371_Ribonuclease_toxin,_BrnT,_of_type_II_toxin-antitoxin_system,_and_BrnA_antitoxin_of_type_II_toxin-antitoxin_system

description:
  Ribonuclease toxin, BrnT, of type II toxin-antitoxin system, and BrnA antitoxin of type II toxin-antitoxin system


id: CL:4389
description: Mixed, incl. Transcription regulation, and Proteolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4389_Mixed,_incl._Transcription_regulation,_and_Proteolysis


id: CL:4401
description: Mixed, incl. YcxB-like protein, and Heme biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4401_Mixed,_incl._YcxB-like_protein,_and_Heme_biosynthetic_process


id: CL:4411
description: Mixed, incl. Response to abiotic stimulus, and Exopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4411_Mixed,_incl._Response_to_abiotic_stimulus,_and_Exopeptidase_activity


id: CL:4412
description: Mostly uncharacterized, incl. dUMP metabolic process, and Carbon fixation pathways in prokaryotes
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4412_Mostly_uncharacterized,_incl._dUMP_metabolic_process,_and_Carbon_fixation_pathways_in_prokaryotes


id: CL:4413
description: Mixed, incl. dUMP metabolic process, and Carbon fixation pathways in prokaryotes
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4413_Mixed,_incl._dUMP_metabolic_process,_and_Carbon_fixation_pathways_in_prokaryotes


id: CL:4436
description: Response to water, and Response to radiation
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4436_Response_to_water,_and_Response_to_radiation


id: CL:4453
description: Mixed, incl. Response to virus, and WYL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4453_Mixed,_incl._Response_to_virus,_and_WYL_domain


id: CL:4454
description: Mixed, incl. Response to virus, and WYL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4454_Mixed,_incl._Response_to_virus,_and_WYL_domain


id: CL:4455
description: Mixed, incl. Response to virus, and HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4455_Mixed,_incl._Response_to_virus,_and_HTH_domain


id: CL:4458
description: Response to virus, and Maintenance of DNA repeat elements
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4458_Response_to_virus,_and_Maintenance_of_DNA_repeat_elements


id: CL:4476
description: Mixed, incl. HTH domain, and RNA methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4476_Mixed,_incl._HTH_domain,_and_RNA_methyltransferase_domain


id: CL:448
description: Prohibitin homologues, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:448_Prohibitin_homologues,_and_ATP-dependent_peptidase_activity


id: CL:4497
description: Mixed, incl. Protein serine/threonine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4497_Mixed,_incl._Protein_serine/threonine_kinase_activity


id: CL:4506
description: Mostly uncharacterized, incl. Chromatin organization, and Asp/Glu/Hydantoin racemase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4506_Mostly_uncharacterized,_incl._Chromatin_organization,_and_Asp/Glu/Hydantoin_racemase


id: CL:4508
description: Chromatin organization, and Transmembrane helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4508_Chromatin_organization,_and_Transmembrane_helix


id: CL:4520
description: Mixed, incl. Asp/Glu/Hydantoin racemase, and FtsJ-like methyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4520_Mixed,_incl._Asp/Glu/Hydantoin_racemase,_and_FtsJ-like_methyltransferase


id: CL:4532
description: Mixed, incl. DNA catabolic process, and Nucleotidyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4532_Mixed,_incl._DNA_catabolic_process,_and_Nucleotidyltransferase_activity


id: CL:4551
description: Mixed, incl. Regulation of cell division, and Magnesium chelatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4551_Mixed,_incl._Regulation_of_cell_division,_and_Magnesium_chelatase_activity


id: CL:4568
description: Ferric uptake regulator family, and Transmembrane helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4568_Ferric_uptake_regulator_family,_and_Transmembrane_helix


id: CL:4579
description: Mixed, incl. Peptidase family M23, and TPR repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4579_Mixed,_incl._Peptidase_family_M23,_and_TPR_repeat


id: CL:4588
description: Mixed, incl. Serine-type endopeptidase activity, and TPR repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4588_Mixed,_incl._Serine-type_endopeptidase_activity,_and_TPR_repeat


id: CL:4590
description: Mixed, incl. Serine-type endopeptidase activity, and Quorum sensing
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4590_Mixed,_incl._Serine-type_endopeptidase_activity,_and_Quorum_sensing


id: CL:4600
description: Mixed, incl. Serine-type endopeptidase activity, and TPR repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4600_Mixed,_incl._Serine-type_endopeptidase_activity,_and_TPR_repeat


id: CL:4610
description: Listeria monocytogenes entry into host cells, and Transmembrane helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4610_Listeria_monocytogenes_entry_into_host_cells,_and_Transmembrane_helix


id: CL:462
description: Mixed, incl. Isoprenoid biosynthetic process, and TRAM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:462_Mixed,_incl._Isoprenoid_biosynthetic_process,_and_TRAM_domain


id: CL:4642
description: Mixed, incl. Quorum sensing, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4642_Mixed,_incl._Quorum_sensing,_and_Signal


id: CL:4643
description: Mixed, incl. Quorum sensing, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4643_Mixed,_incl._Quorum_sensing,_and_Signal


id: CL:4644
description: Mixed, incl. Quorum sensing, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4644_Mixed,_incl._Quorum_sensing,_and_Signal


id: CL:4742
description: Mixed, incl. Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:4742_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins


id: CL:479
description: Mixed, incl. Glycerolipid biosynthetic process, and Prenyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:479_Mixed,_incl._Glycerolipid_biosynthetic_process,_and_Prenyltransferase_activity


id: CL:493
description: Transporter associated domain, and Elongator protein 3, MiaB family, Radical SAM
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:493_Transporter_associated_domain,_and_Elongator_protein_3,_MiaB_family,_Radical_SAM


id: CL:506
description: Catalytic activity, acting on DNA, and Nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:506_Catalytic_activity,_acting_on_DNA,_and_Nucleoid


id: CL:507
description: Catalytic activity, acting on DNA, and Nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:507_Catalytic_activity,_acting_on_DNA,_and_Nucleoid


id: CL:515
description: UvrD/REP helicase N-terminal domain, and Bacterial nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:515_UvrD/REP_helicase_N-terminal_domain,_and_Bacterial_nucleoid


id: CL:530
description: Primosome, and Single-strand binding protein family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:530_Primosome,_and_Single-strand_binding_protein_family


id: CL:556
description: Damaged DNA binding, and Peptidase S24-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:556_Damaged_DNA_binding,_and_Peptidase_S24-like


id: CL:566
description: Endodeoxyribonuclease complex, and DNA recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:566_Endodeoxyribonuclease_complex,_and_DNA_recombination


id: CL:582
description: Mixed, incl. DHH family, and Bacterial nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:582_Mixed,_incl._DHH_family,_and_Bacterial_nucleoid


id: CL:591
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:591_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity,_and_RecF/RecN/SMC_N_terminal_domain

description:
  DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity, and RecF/RecN/SMC N terminal domain


id: CL:604
description: Exodeoxyribonuclease VII complex, and WYL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:604_Exodeoxyribonuclease_VII_complex,_and_WYL_domain


id: CL:614
description: Mixed, incl. rRNA pseudouridine synthesis, and tryptophan-tRNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:614_Mixed,_incl._rRNA_pseudouridine_synthesis,_and_tryptophan-tRNA_ligase_activity


id: CL:630
description: Mixed, incl. RNA pseudouridylate synthase, and SpoU rRNA Methylase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:630_Mixed,_incl._RNA_pseudouridylate_synthase,_and_SpoU_rRNA_Methylase_family


id: CL:631
description: Mixed, incl. SpoU rRNA Methylase family, and RNA pseudouridylate synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:631_Mixed,_incl._SpoU_rRNA_Methylase_family,_and_RNA_pseudouridylate_synthase


id: CL:634
description: Mixed, incl. rRNA (guanine-N7)-methylation, and Ferrous iron transport protein B
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:634_Mixed,_incl._rRNA_(guanine-N7)-methylation,_and_Ferrous_iron_transport_protein_B


id: CL:652
description: Mixed, incl. RNA pseudouridylate synthase, and Regulation of locomotion
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:652_Mixed,_incl._RNA_pseudouridylate_synthase,_and_Regulation_of_locomotion


id: CL:663
description: Mixed, incl. Ketone catabolic process, and Rhodanese Homology Domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:663_Mixed,_incl._Ketone_catabolic_process,_and_Rhodanese_Homology_Domain


id: CL:665
description: Rhodanese Homology Domain, and tRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:665_Rhodanese_Homology_Domain,_and_tRNA_pseudouridine_synthesis


id: CL:677
description: Mixed, incl. Transporter associated domain, and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:677_Mixed,_incl._Transporter_associated_domain,_and_Ribosome_biogenesis


id: CL:686
description: Mixed, incl. FtsX-like permease family, and UvrB/uvrC motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:686_Mixed,_incl._FtsX-like_permease_family,_and_UvrB/uvrC_motif


id: CL:689
description: Mixed, incl. FtsX-like permease family, and UvrB/uvrC motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:689_Mixed,_incl._FtsX-like_permease_family,_and_UvrB/uvrC_motif


id: CL:709
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:709_Mixed,_incl._D-gluconate_metabolic_process,_and_6-O-methylguanine_DNA_methyltransferase,_DNA_binding_domain

description:
  Mixed, incl. D-gluconate metabolic process, and 6-O-methylguanine DNA methyltransferase, DNA binding domain


id: CL:725
description: Mixed, incl. Thiamine metabolism, and Iron-sulfur cluster assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:725_Mixed,_incl._Thiamine_metabolism,_and_Iron-sulfur_cluster_assembly


id: CL:726
description: Iron-sulfur cluster assembly, and Sulfurtransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:726_Iron-sulfur_cluster_assembly,_and_Sulfurtransferase_activity


id: CL:728
description: Iron-sulfur cluster assembly, and Sulfurtransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:728_Iron-sulfur_cluster_assembly,_and_Sulfurtransferase_activity


id: CL:746
description: Mixed, incl. Thiamine metabolism, and Smr domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:746_Mixed,_incl._Thiamine_metabolism,_and_Smr_domain


id: CL:758
description: Mixed, incl. Fatty acid biosynthetic process, and Biotin metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:758_Mixed,_incl._Fatty_acid_biosynthetic_process,_and_Biotin_metabolism


id: CL:760
description: Mixed, incl. Fatty acid biosynthetic process, and Biotin metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:760_Mixed,_incl._Fatty_acid_biosynthetic_process,_and_Biotin_metabolism


id: CL:762
description: Mixed, incl. Biotin metabolism, and Fatty acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:762_Mixed,_incl._Biotin_metabolism,_and_Fatty_acid_biosynthetic_process


id: CL:764
description: Mixed, incl. Phosphopantetheine attachment site, and Carotenoid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:764_Mixed,_incl._Phosphopantetheine_attachment_site,_and_Carotenoid_biosynthesis


id: CL:766
description: Mixed, incl. Glycolipid metabolic process, and Thioesterase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:766_Mixed,_incl._Glycolipid_metabolic_process,_and_Thioesterase_superfamily


id: CL:814
description: Peptidase M16 inactive domain, and Alpha/beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:814_Peptidase_M16_inactive_domain,_and_Alpha/beta_hydrolase_fold


id: CL:840
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:840_Small_molecule_metabolic_process,_and_This_conserved_region_includes_the_FMN-binding_site_of_the_NqrC_protein_as_well_as_the_NosR_and_NirI_regulatory_proteins.

description:
  Small molecule metabolic process, and This conserved region includes the FMN-binding site of the NqrC protein as well as the NosR and NirI regulatory proteins.


id: CL:841
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:841_Small_molecule_metabolic_process,_and_This_conserved_region_includes_the_FMN-binding_site_of_the_NqrC_protein_as_well_as_the_NosR_and_NirI_regulatory_proteins.

description:
  Small molecule metabolic process, and This conserved region includes the FMN-binding site of the NqrC protein as well as the NosR and NirI regulatory proteins.


id: CL:842
description: Cellular amino acid metabolic process, and Nucleobase-containing small molecule metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:842_Cellular_amino_acid_metabolic_process,_and_Nucleobase-containing_small_molecule_metabolic_process


id: CL:843
description: Biosynthesis of amino acids, and Pyruvate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:843_Biosynthesis_of_amino_acids,_and_Pyruvate_metabolism


id: CL:844
description: Mixed, incl. Pyruvate metabolism, and 2-Oxocarboxylic acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:844_Mixed,_incl._Pyruvate_metabolism,_and_2-Oxocarboxylic_acid_metabolism


id: CL:845
description: 2-Oxocarboxylic acid metabolism, and Pyruvate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:845_2-Oxocarboxylic_acid_metabolism,_and_Pyruvate_metabolism


id: CL:846
description: 2-Oxocarboxylic acid metabolism, and acyl-CoA biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:846_2-Oxocarboxylic_acid_metabolism,_and_acyl-CoA_biosynthetic_process


id: CL:848
description: Mixed, incl. acyl-CoA biosynthetic process, and Pyruvate
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:848_Mixed,_incl._acyl-CoA_biosynthetic_process,_and_Pyruvate


id: CL:881
description: C5-Branched dibasic acid metabolism, and Leucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:881_C5-Branched_dibasic_acid_metabolism,_and_Leucine_biosynthesis


id: CL:902
description: Sodium ion transport, and Malate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:902_Sodium_ion_transport,_and_Malate_metabolic_process


id: CL:914
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:914_This_conserved_region_includes_the_FMN-binding_site_of_the_NqrC_protein_as_well_as_the_NosR_and_NirI_regulatory_proteins.,_and_4Fe-4S_binding_domain

description:
  This conserved region includes the FMN-binding site of the NqrC protein as well as the NosR and NirI regulatory proteins., and 4Fe-4S binding domain


id: CL:917
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:917_This_conserved_region_includes_the_FMN-binding_site_of_the_NqrC_protein_as_well_as_the_NosR_and_NirI_regulatory_proteins.

description:
  This conserved region includes the FMN-binding site of the NqrC protein as well as the NosR and NirI regulatory proteins.


id: CL:921
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:921_This_conserved_region_includes_the_FMN-binding_site_of_the_NqrC_protein_as_well_as_the_NosR_and_NirI_regulatory_proteins.

description:
  This conserved region includes the FMN-binding site of the NqrC protein as well as the NosR and NirI regulatory proteins.


id: CL:93
description: Translation, and ATP-dependent activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:93_Translation,_and_ATP-dependent_activity


id: CL:942
description: 4Fe-4S binding domain, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:942_4Fe-4S_binding_domain,_and_4Fe-4S_binding_domain


id: CL:951
description: Cellular amino acid biosynthetic process, and PHP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:951_Cellular_amino_acid_biosynthetic_process,_and_PHP_domain


id: CL:953
description: Lysine metabolic process, and Arginine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:953_Lysine_metabolic_process,_and_Arginine_metabolic_process


id: CL:954
description: Lysine metabolic process, and Threonine synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:954_Lysine_metabolic_process,_and_Threonine_synthase_activity


id: CL:97
description: Mixed, incl. Ribosome, and Protein export
name:
  Local Network Cluster (STRING).STRING_v12.0_1125701_STRINGid_CL:97_Mixed,_incl._Ribosome,_and_Protein_export


id: GO:0000462
description: Maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
memo: https://amigo.geneontology.org/amigo/term/GO:0000462
golevel: 11
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0000462_Maturation_of_SSU-rRNA_from_tricistronic_rRNA_transcript_(SSU-rRNA,_5.8S_rRNA,_LSU-rRNA)


id: GO:0000701
description: Purine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0000701
golevel: 7
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0000701_Purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 10
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000724
description: Double-strand break repair via homologous recombination
memo: https://amigo.geneontology.org/amigo/term/GO:0000724
golevel: 9
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0000724_Double-strand_break_repair_via_homologous_recombination


id: GO:0000977
description: RNA polymerase II transcription regulatory region sequence-specific DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0000977
golevel: 8
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0000977_RNA_polymerase_II_transcription_regulatory_region_sequence-specific_DNA_binding


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 6
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003992
description: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003992
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0003992_N2-acetyl-L-ornithine:2-oxoglutarate_5-aminotransferase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
golevel: 6
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004365
description: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004365
golevel: 6
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0004365_glyceraldehyde-3-phosphate_dehydrogenase_(NAD+)_(phosphorylating)_activity


id: GO:0004471
description: Malate dehydrogenase (decarboxylating) (NAD+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004471
golevel: 6
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0004471_Malate_dehydrogenase_(decarboxylating)_(NAD+)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 6
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004616
description: Phosphogluconate dehydrogenase (decarboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004616
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0004616_Phosphogluconate_dehydrogenase_(decarboxylating)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004648
description: O-phospho-L-serine:2-oxoglutarate aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004648
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0004648_O-phospho-L-serine:2-oxoglutarate_aminotransferase_activity


id: GO:0005350
description: Pyrimidine nucleobase transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005350
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0005350_Pyrimidine_nucleobase_transmembrane_transporter_activity


id: GO:0005477
description: Pyruvate secondary active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005477
golevel: 7
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0005477_Pyruvate_secondary_active_transmembrane_transporter_activity


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 11
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0008028
description: Monocarboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008028
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0008028_Monocarboxylic_acid_transmembrane_transporter_activity


id: GO:0008263
description: Pyrimidine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008263
golevel: 7
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0008263_Pyrimidine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
golevel: 6
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008697
description: 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008697
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0008697_4-deoxy-L-threo-5-hexosulose-uronate_ketol-isomerase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008893
description: guanosine-3,5-bis(diphosphate) 3-diphosphatase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008893
golevel: 6
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0008893_guanosine-3,5-bis(diphosphate)_3-diphosphatase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0008965
description: Phosphoenolpyruvate-protein phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008965
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0008965_Phosphoenolpyruvate-protein_phosphotransferase_activity


id: GO:0008982
description: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008982
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0008982_protein-N(PI)-phosphohistidine-sugar_phosphotransferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 6
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 9
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 9
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009139
description: Pyrimidine nucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009139
golevel: 9
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0009139_Pyrimidine_nucleoside_diphosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 9
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009157
description: Deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009157
golevel: 9
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0009157_Deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 10
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 9
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 10
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009175
description: Pyrimidine ribonucleoside monophosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009175
golevel: 10
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0009175_Pyrimidine_ribonucleoside_monophosphate_catabolic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 9
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 10
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 9
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 10
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 10
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 9
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 10
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009210
description: Pyrimidine ribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009210
golevel: 10
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0009210_Pyrimidine_ribonucleoside_triphosphate_catabolic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 9
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 10
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 10
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 9
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 10
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009401
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system
memo: https://amigo.geneontology.org/amigo/term/GO:0009401
golevel: 8
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0009401_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 6
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 6
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 6
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0010604
description: Positive regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010604
golevel: 5
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0010604_Positive_regulation_of_macromolecule_metabolic_process


id: GO:0010605
description: Negative regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010605
golevel: 5
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0010605_Negative_regulation_of_macromolecule_metabolic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
golevel: 3
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015355
description: Secondary active monocarboxylate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015355
golevel: 6
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0015355_Secondary_active_monocarboxylate_transmembrane_transporter_activity


id: GO:0015451
description: Decarboxylation-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015451
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0015451_Decarboxylation-driven_active_transmembrane_transporter_activity


id: GO:0015658
description: Branched-chain amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015658
golevel: 6
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0015658_Branched-chain_amino_acid_transmembrane_transporter_activity


id: GO:0015975
description: Energy derivation by oxidation of reduced inorganic compounds
memo: https://amigo.geneontology.org/amigo/term/GO:0015975
golevel: 4
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0015975_Energy_derivation_by_oxidation_of_reduced_inorganic_compounds


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016641
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016641
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016641_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_oxygen_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016705
memo: https://amigo.geneontology.org/amigo/term/GO:0016705
golevel: 3
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016705_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: GO:0016716
memo: https://amigo.geneontology.org/amigo/term/GO:0016716
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016716_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_another_compound_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016730
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016730
golevel: 3
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016730_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016773
description: Phosphotransferase activity, alcohol group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016773
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016773_Phosphotransferase_activity,_alcohol_group_as_acceptor


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
golevel: 6
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016837
description: Carbon-oxygen lyase activity, acting on polysaccharides
memo: https://amigo.geneontology.org/amigo/term/GO:0016837
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016837_Carbon-oxygen_lyase_activity,_acting_on_polysaccharides


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016856
description: Racemase and epimerase activity, acting on hydroxy acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016856
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016856_Racemase_and_epimerase_activity,_acting_on_hydroxy_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016889
description: Endodeoxyribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016889
golevel: 7
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016889_Endodeoxyribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 7
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
golevel: 6
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016894
memo: https://amigo.geneontology.org/amigo/term/GO:0016894
golevel: 6
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016894_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_3-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 7
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016896
description: Exoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016896
golevel: 7
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016896_Exoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016901
memo: https://amigo.geneontology.org/amigo/term/GO:0016901
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016901_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0018339
description: peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid
memo: https://amigo.geneontology.org/amigo/term/GO:0018339
golevel: 8
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0018339_peptidyl-L-beta-methylthioaspartic_acid_biosynthetic_process_from_peptidyl-aspartic_acid


id: GO:0019171
description: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019171
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0019171_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 5
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019243
description: Methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
memo: https://amigo.geneontology.org/amigo/term/GO:0019243
golevel: 9
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0019243_Methylglyoxal_catabolic_process_to_D-lactate_via_S-lactoyl-glutathione


id: GO:0019279
description: L-methionine biosynthetic process from L-homoserine via cystathionine
memo: https://amigo.geneontology.org/amigo/term/GO:0019279
golevel: 13
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0019279_L-methionine_biosynthetic_process_from_L-homoserine_via_cystathionine


id: GO:0019281
description: L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
memo: https://amigo.geneontology.org/amigo/term/GO:0019281
golevel: 14
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0019281_L-methionine_biosynthetic_process_from_homoserine_via_O-succinyl-L-homoserine_and_cystathionine


id: GO:0019288
description: Isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019288
golevel: 8
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0019288_Isopentenyl_diphosphate_biosynthetic_process,_methylerythritol_4-phosphate_pathway


id: GO:0019556
description: Histidine catabolic process to glutamate and formamide
memo: https://amigo.geneontology.org/amigo/term/GO:0019556
golevel: 10
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0019556_Histidine_catabolic_process_to_glutamate_and_formamide


id: GO:0019829
description: ATPase-coupled cation transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019829
golevel: 6
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0019829_ATPase-coupled_cation_transmembrane_transporter_activity


id: GO:0030435
description: Sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0030435
golevel: 3
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0030435_Sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0030604
description: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030604
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0030604_1-deoxy-D-xylulose-5-phosphate_reductoisomerase_activity


id: GO:0031233
description: Intrinsic component of external side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031233
name:
  GOCC.STRING_v12.0_1125701_STRINGid_GO:0031233_Intrinsic_component_of_external_side_of_plasma_membrane


id: GO:0031250
description: Anaerobic ribonucleoside-triphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031250
golevel: 4
name:
  GOCC.STRING_v12.0_1125701_STRINGid_GO:0031250_Anaerobic_ribonucleoside-triphosphate_reductase_complex


id: GO:0031554
description: Regulation of DNA-templated transcription, termination
memo: https://amigo.geneontology.org/amigo/term/GO:0031554
golevel: 11
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0031554_Regulation_of_DNA-templated_transcription,_termination


id: GO:0032414
description: Positive regulation of ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0032414
golevel: 8
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0032414_Positive_regulation_of_ion_transmembrane_transporter_activity


id: GO:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
golevel: 3
name:
  GOCC.STRING_v12.0_1125701_STRINGid_GO:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GO:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
golevel: 3
name:
  GOCC.STRING_v12.0_1125701_STRINGid_GO:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GO:0033283
description: ATPase-coupled organic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033283
golevel: 6
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0033283_ATPase-coupled_organic_acid_transmembrane_transporter_activity


id: GO:0033284
description: ATPase-coupled carboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033284
golevel: 7
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0033284_ATPase-coupled_carboxylic_acid_transmembrane_transporter_activity


id: GO:0033362
description: Lysine biosynthetic process via diaminopimelate, diaminopimelate-aminotransferase pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0033362
golevel: 12
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0033362_Lysine_biosynthetic_process_via_diaminopimelate,_diaminopimelate-aminotransferase_pathway


id: GO:0034249
description: Negative regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034249
golevel: 6
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0034249_Negative_regulation_of_cellular_amide_metabolic_process


id: GO:0034250
description: Positive regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034250
golevel: 6
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0034250_Positive_regulation_of_cellular_amide_metabolic_process


id: GO:0034404
description: Nucleobase-containing small molecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034404
golevel: 6
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0034404_Nucleobase-containing_small_molecule_biosynthetic_process


id: GO:0034656
description: Nucleobase-containing small molecule catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034656
golevel: 6
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0034656_Nucleobase-containing_small_molecule_catabolic_process


id: GO:0035592
description: Establishment of protein localization to extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0035592
golevel: 6
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0035592_Establishment_of_protein_localization_to_extracellular_region


id: GO:0035998
description: 7,8-dihydroneopterin 3-triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0035998
golevel: 6
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0035998_7,8-dihydroneopterin_3-triphosphate_biosynthetic_process


id: GO:0036361
description: Racemase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0036361
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0036361_Racemase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0042083
description: 5,10-methylenetetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042083
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0042083_5,10-methylenetetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042777
description: Proton motive force-driven plasma membrane ATP synthesis
memo: https://amigo.geneontology.org/amigo/term/GO:0042777
golevel: 13
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0042777_Proton_motive_force-driven_plasma_membrane_ATP_synthesis


id: GO:0043161
description: Proteasome-mediated ubiquitin-dependent protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0043161
golevel: 9
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0043161_Proteasome-mediated_ubiquitin-dependent_protein_catabolic_process


id: GO:0043632
description: Modification-dependent macromolecule catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0043632
golevel: 6
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0043632_Modification-dependent_macromolecule_catabolic_process


id: GO:0043891
description: glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043891
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0043891_glyceraldehyde-3-phosphate_dehydrogenase_(NAD(P)+)_(phosphorylating)_activity


id: GO:0044419
description: Biological process involved in interspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0044419
golevel: 1
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0044419_Biological_process_involved_in_interspecies_interaction_between_organisms


id: GO:0044769
description: ATPase activity, coupled to transmembrane movement of ions, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0044769
golevel: 7
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0044769_ATPase_activity,_coupled_to_transmembrane_movement_of_ions,_rotational_mechanism


id: GO:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
golevel: 6
name:
  GOCC.STRING_v12.0_1125701_STRINGid_GO:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GO:0045934
description: Negative regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045934
golevel: 6
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0045934_Negative_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0045935
description: Positive regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045935
golevel: 6
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0045935_Positive_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0046429
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046429
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0046429_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_synthase_activity


id: GO:0046538
description: 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046538
golevel: 6
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0046538_2,3-bisphosphoglycerate-dependent_phosphoglycerate_mutase_activity


id: GO:0046912
description: Acyltransferase activity, acyl groups converted into alkyl on transfer
memo: https://amigo.geneontology.org/amigo/term/GO:0046912
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0046912_Acyltransferase_activity,_acyl_groups_converted_into_alkyl_on_transfer


id: GO:0046915
description: Transition metal ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046915
golevel: 6
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0046915_Transition_metal_ion_transmembrane_transporter_activity


id: GO:0046933
description: Proton-transporting ATP synthase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046933
golevel: 8
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0046933_Proton-transporting_ATP_synthase_activity,_rotational_mechanism


id: GO:0046961
description: Proton-transporting ATPase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046961
golevel: 8
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0046961_Proton-transporting_ATPase_activity,_rotational_mechanism


id: GO:0047451
description: 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047451
golevel: 6
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0047451_3-hydroxyoctanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0047480
description: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047480
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0047480_UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine_ligase_activity


id: GO:0048646
description: Anatomical structure formation involved in morphogenesis
memo: https://amigo.geneontology.org/amigo/term/GO:0048646
golevel: 2
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0048646_Anatomical_structure_formation_involved_in_morphogenesis


id: GO:0050511
description: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050511
golevel: 6
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0050511_Undecaprenyldiphospho-muramoylpentapeptide_beta-N-acetylglucosaminyltransferase_activity


id: GO:0050515
description: 4-(cytidine 5-diphospho)-2-C-methyl-D-erythritol kinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050515
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0050515_4-(cytidine_5-diphospho)-2-C-methyl-D-erythritol_kinase_activity


id: GO:0050518
description: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050518
golevel: 6
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0050518_2-C-methyl-D-erythritol_4-phosphate_cytidylyltransferase_activity


id: GO:0050566
description: asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050566
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0050566_asparaginyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0050567
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050567
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0050567_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0051003
description: Ligase activity, forming nitrogen-metal bonds, forming coordination complexes
memo: https://amigo.geneontology.org/amigo/term/GO:0051003
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0051003_Ligase_activity,_forming_nitrogen-metal_bonds,_forming_coordination_complexes


id: GO:0051075
description: S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051075
golevel: 3
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0051075_S-adenosylmethionine:tRNA_ribosyltransferase-isomerase_activity


id: GO:0051172
description: Negative regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051172
golevel: 5
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0051172_Negative_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051173
description: Positive regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051173
golevel: 5
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0051173_Positive_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051240
description: Positive regulation of multicellular organismal process
memo: https://amigo.geneontology.org/amigo/term/GO:0051240
golevel: 4
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0051240_Positive_regulation_of_multicellular_organismal_process


id: GO:0051745
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051745
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0051745_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_reductase_activity


id: GO:0051991
memo: https://amigo.geneontology.org/amigo/term/GO:0051991
golevel: 6
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0051991_UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol_4-beta-N-acetylglucosaminlytransferase_activity

description:
  UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity


id: GO:0051992
memo: https://amigo.geneontology.org/amigo/term/GO:0051992
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0051992_UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate_transferase_activity

description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity


id: GO:0052592
description: Oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0052592
golevel: 4
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0052592_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_with_an_iron-sulfur_protein_as_acceptor


id: GO:0052908
description: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052908
golevel: 9
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0052908_16S_rRNA_(adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase_activity


id: GO:0055086
description: Nucleobase-containing small molecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0055086
golevel: 3
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0055086_Nucleobase-containing_small_molecule_metabolic_process


id: GO:0061504
description: Cyclic threonylcarbamoyladenosine biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0061504
golevel: 11
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0061504_Cyclic_threonylcarbamoyladenosine_biosynthetic_process


id: GO:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
golevel: 4
name:
  GOCC.STRING_v12.0_1125701_STRINGid_GO:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GO:0061712
description: tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase
memo: https://amigo.geneontology.org/amigo/term/GO:0061712
golevel: 6
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0061712_tRNA_(N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase


id: GO:0070626
memo: https://amigo.geneontology.org/amigo/term/GO:0070626
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0070626_(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)_succinate_lyase_(fumarate-forming)_activity

description:
  (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity


id: GO:0070647
description: Protein modification by small protein conjugation or removal
memo: https://amigo.geneontology.org/amigo/term/GO:0070647
golevel: 6
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0070647_Protein_modification_by_small_protein_conjugation_or_removal


id: GO:0071575
description: Integral component of external side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0071575
name:
  GOCC.STRING_v12.0_1125701_STRINGid_GO:0071575_Integral_component_of_external_side_of_plasma_membrane


id: GO:0071596
description: Ubiquitin-dependent protein catabolic process via the N-end rule pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0071596
golevel: 10
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0071596_Ubiquitin-dependent_protein_catabolic_process_via_the_N-end_rule_pathway


id: GO:0071951
description: Conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
memo: https://amigo.geneontology.org/amigo/term/GO:0071951
golevel: 12
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0071951_Conversion_of_methionyl-tRNA_to_N-formyl-methionyl-tRNA


id: GO:0072349
description: Modified amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0072349
golevel: 3
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0072349_Modified_amino_acid_transmembrane_transporter_activity


id: GO:0072531
description: Pyrimidine-containing compound transmembrane transport
memo: https://amigo.geneontology.org/amigo/term/GO:0072531
golevel: 5
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0072531_Pyrimidine-containing_compound_transmembrane_transport


id: GO:0072599
description: Establishment of protein localization to endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0072599
golevel: 7
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0072599_Establishment_of_protein_localization_to_endoplasmic_reticulum


id: GO:0097588
description: Archaeal or bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:0097588
golevel: 4
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0097588_Archaeal_or_bacterial-type_flagellum-dependent_cell_motility


id: GO:0102752
memo: https://amigo.geneontology.org/amigo/term/GO:0102752
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0102752_1,4-alpha-glucan_branching_enzyme_activity_(using_a_glucosylated_glycogenin_as_primer_for_glycogen_synthesis)

description:
  1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis)


id: GO:0106074
description: aminoacyl-tRNA metabolism involved in translational fidelity
memo: https://amigo.geneontology.org/amigo/term/GO:0106074
golevel: 9
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:0106074_aminoacyl-tRNA_metabolism_involved_in_translational_fidelity


id: GO:0140078
description: Class I DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0140078
golevel: 5
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:0140078_Class_I_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:1901381
description: Positive regulation of potassium ion transmembrane transport
memo: https://amigo.geneontology.org/amigo/term/GO:1901381
golevel: 10
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:1901381_Positive_regulation_of_potassium_ion_transmembrane_transport


id: GO:1901505
description: Carbohydrate derivative transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901505
golevel: 3
name:
  GOMF.STRING_v12.0_1125701_STRINGid_GO:1901505_Carbohydrate_derivative_transmembrane_transporter_activity


id: GO:1901800
description: Positive regulation of proteasomal protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1901800
golevel: 9
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:1901800_Positive_regulation_of_proteasomal_protein_catabolic_process


id: GO:1902021
description: Regulation of bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:1902021
golevel: 6
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:1902021_Regulation_of_bacterial-type_flagellum-dependent_cell_motility


id: GO:1903050
description: Regulation of proteolysis involved in protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1903050
golevel: 7
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:1903050_Regulation_of_proteolysis_involved_in_protein_catabolic_process


id: GO:1903052
description: Positive regulation of proteolysis involved in protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1903052
golevel: 8
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:1903052_Positive_regulation_of_proteolysis_involved_in_protein_catabolic_process


id: GO:1903507
description: Negative regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903507
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:1903507_Negative_regulation_of_nucleic_acid-templated_transcription


id: GO:1903508
description: Positive regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903508
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:1903508_Positive_regulation_of_nucleic_acid-templated_transcription


id: GO:2000112
description: Regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000112
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:2000112_Regulation_of_cellular_macromolecule_biosynthetic_process


id: GO:2000113
description: Negative regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000113
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:2000113_Negative_regulation_of_cellular_macromolecule_biosynthetic_process


id: GO:2001060
description: D-glycero-D-manno-heptose 7-phosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:2001060
golevel: 5
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:2001060_D-glycero-D-manno-heptose_7-phosphate_metabolic_process


id: GO:2001061
description: D-glycero-D-manno-heptose 7-phosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2001061
golevel: 6
name:
  GOBP.STRING_v12.0_1125701_STRINGid_GO:2001061_D-glycero-D-manno-heptose_7-phosphate_biosynthetic_process


id: GOCC:0000015
description: Phosphopyruvate hydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000015
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0000015_Phosphopyruvate_hydratase_complex


id: GOCC:0000221
description: Vacuolar proton-transporting V-type ATPase, V1 domain
memo: https://amigo.geneontology.org/amigo/term/GO:0000221
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0000221_Vacuolar_proton-transporting_V-type_ATPase,_V1_domain


id: GOCC:0000408
description: EKC/KEOPS complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000408
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0000408_EKC/KEOPS_complex


id: GOCC:0000428
description: DNA-directed RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000428
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0000428_DNA-directed_RNA_polymerase_complex


id: GOCC:0000502
description: Proteasome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000502
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0000502_Proteasome_complex


id: GOCC:0000930
description: Gamma-tubulin complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000930
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0000930_Gamma-tubulin_complex


id: GOCC:0000931
description: Gamma-tubulin large complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000931
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0000931_Gamma-tubulin_large_complex


id: GOCC:0005576
description: Extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0005576
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0005576_Extracellular_region


id: GOCC:0005615
description: Extracellular space
memo: https://amigo.geneontology.org/amigo/term/GO:0005615
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0005615_Extracellular_space


id: GOCC:0005727
description: Extrachromosomal circular DNA
memo: https://amigo.geneontology.org/amigo/term/GO:0005727
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0005727_Extrachromosomal_circular_DNA


id: GOCC:0005740
description: Mitochondrial envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0005740
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0005740_Mitochondrial_envelope


id: GOCC:0005741
description: Mitochondrial outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005741
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0005741_Mitochondrial_outer_membrane


id: GOCC:0005743
description: Mitochondrial inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005743
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0005743_Mitochondrial_inner_membrane


id: GOCC:0005746
description: Mitochondrial respirasome
memo: https://amigo.geneontology.org/amigo/term/GO:0005746
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0005746_Mitochondrial_respirasome


id: GOCC:0005747
description: Mitochondrial respiratory chain complex I
memo: https://amigo.geneontology.org/amigo/term/GO:0005747
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0005747_Mitochondrial_respiratory_chain_complex_I


id: GOCC:0005759
description: Mitochondrial matrix
memo: https://amigo.geneontology.org/amigo/term/GO:0005759
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0005759_Mitochondrial_matrix


id: GOCC:0005774
description: Vacuolar membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005774
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0005774_Vacuolar_membrane


id: GOCC:0005783
description: Endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0005783
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0005783_Endoplasmic_reticulum


id: GOCC:0005788
description: Endoplasmic reticulum lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0005788
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0005788_Endoplasmic_reticulum_lumen


id: GOCC:0005789
description: Endoplasmic reticulum membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005789
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0005789_Endoplasmic_reticulum_membrane


id: GOCC:0005815
description: Microtubule organizing center
memo: https://amigo.geneontology.org/amigo/term/GO:0005815
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0005815_Microtubule_organizing_center


id: GOCC:0005835
description: Fatty acid synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005835
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0005835_Fatty_acid_synthase_complex


id: GOCC:0005839
description: Proteasome core complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005839
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0005839_Proteasome_core_complex


id: GOCC:0005882
description: Intermediate filament
memo: https://amigo.geneontology.org/amigo/term/GO:0005882
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0005882_Intermediate_filament


id: GOCC:0005887
description: Integral component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005887
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0005887_Integral_component_of_plasma_membrane


id: GOCC:0005911
description: Cell-cell junction
memo: https://amigo.geneontology.org/amigo/term/GO:0005911
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0005911_Cell-cell_junction


id: GOCC:0005948
description: Acetolactate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005948
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0005948_Acetolactate_synthase_complex


id: GOCC:0005951
description: Carbamoyl-phosphate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005951
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0005951_Carbamoyl-phosphate_synthase_complex


id: GOCC:0008076
description: Voltage-gated potassium channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0008076
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0008076_Voltage-gated_potassium_channel_complex


id: GOCC:0009279
description: Cell outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009279
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0009279_Cell_outer_membrane


id: GOCC:0009288
description: Bacterial-type flagellum
memo: https://amigo.geneontology.org/amigo/term/GO:0009288
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0009288_Bacterial-type_flagellum


id: GOCC:0009316
description: 3-isopropylmalate dehydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009316
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0009316_3-isopropylmalate_dehydratase_complex


id: GOCC:0009317
description: acetyl-CoA carboxylase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009317
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0009317_acetyl-CoA_carboxylase_complex


id: GOCC:0009318
description: Exodeoxyribonuclease VII complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009318
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0009318_Exodeoxyribonuclease_VII_complex


id: GOCC:0009326
description: Formate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009326
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0009326_Formate_dehydrogenase_complex


id: GOCC:0009328
description: phenylalanine-tRNA ligase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009328
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0009328_phenylalanine-tRNA_ligase_complex


id: GOCC:0009330
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009330
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0009330_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_complex


id: GOCC:0009331
description: glycerol-3-phosphate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009331
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0009331_glycerol-3-phosphate_dehydrogenase_complex


id: GOCC:0009347
description: Aspartate carbamoyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009347
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0009347_Aspartate_carbamoyltransferase_complex


id: GOCC:0009360
description: DNA polymerase III complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009360
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0009360_DNA_polymerase_III_complex


id: GOCC:0009368
description: Endopeptidase Clp complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009368
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0009368_Endopeptidase_Clp_complex


id: GOCC:0009376
description: HslUV protease complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009376
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0009376_HslUV_protease_complex


id: GOCC:0009379
description: Holliday junction helicase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009379
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0009379_Holliday_junction_helicase_complex


id: GOCC:0009380
description: Excinuclease repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009380
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0009380_Excinuclease_repair_complex


id: GOCC:0009420
description: Bacterial-type flagellum filament
memo: https://amigo.geneontology.org/amigo/term/GO:0009420
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0009420_Bacterial-type_flagellum_filament


id: GOCC:0009421
description: Bacterial-type flagellum filament cap
memo: https://amigo.geneontology.org/amigo/term/GO:0009421
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0009421_Bacterial-type_flagellum_filament_cap


id: GOCC:0009424
description: Bacterial-type flagellum hook
memo: https://amigo.geneontology.org/amigo/term/GO:0009424
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0009424_Bacterial-type_flagellum_hook


id: GOCC:0009425
description: Bacterial-type flagellum basal body
memo: https://amigo.geneontology.org/amigo/term/GO:0009425
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0009425_Bacterial-type_flagellum_basal_body


id: GOCC:0009426
description: Bacterial-type flagellum basal body, distal rod
memo: https://amigo.geneontology.org/amigo/term/GO:0009426
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0009426_Bacterial-type_flagellum_basal_body,_distal_rod


id: GOCC:0009431
description: Bacterial-type flagellum basal body, MS ring
memo: https://amigo.geneontology.org/amigo/term/GO:0009431
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0009431_Bacterial-type_flagellum_basal_body,_MS_ring


id: GOCC:0009538
description: Photosystem I reaction center
memo: https://amigo.geneontology.org/amigo/term/GO:0009538
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0009538_Photosystem_I_reaction_center


id: GOCC:0009570
description: Chloroplast stroma
memo: https://amigo.geneontology.org/amigo/term/GO:0009570
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0009570_Chloroplast_stroma


id: GOCC:0009897
description: External side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009897
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0009897_External_side_of_plasma_membrane


id: GOCC:0009898
description: Cytoplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009898
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0009898_Cytoplasmic_side_of_plasma_membrane


id: GOCC:0010008
description: Endosome membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0010008
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0010008_Endosome_membrane


id: GOCC:0010170
description: glucose-1-phosphate adenylyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0010170
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0010170_glucose-1-phosphate_adenylyltransferase_complex


id: GOCC:0012505
description: Endomembrane system
memo: https://amigo.geneontology.org/amigo/term/GO:0012505
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0012505_Endomembrane_system


id: GOCC:0015627
description: Type II protein secretion system complex
memo: https://amigo.geneontology.org/amigo/term/GO:0015627
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0015627_Type_II_protein_secretion_system_complex


id: GOCC:0015630
description: Microtubule cytoskeleton
memo: https://amigo.geneontology.org/amigo/term/GO:0015630
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0015630_Microtubule_cytoskeleton


id: GOCC:0015934
description: Large ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0015934
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0015934_Large_ribosomal_subunit


id: GOCC:0015935
description: Small ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0015935
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0015935_Small_ribosomal_subunit


id: GOCC:0016021
description: Integral component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0016021
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0016021_Integral_component_of_membrane


id: GOCC:0016469
description: Proton-transporting two-sector ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016469
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0016469_Proton-transporting_two-sector_ATPase_complex


id: GOCC:0016471
description: Vacuolar proton-transporting V-type ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016471
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0016471_Vacuolar_proton-transporting_V-type_ATPase_complex


id: GOCC:0016610
description: Nitrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016610
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0016610_Nitrogenase_complex


id: GOCC:0016612
description: Molybdenum-iron nitrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016612
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0016612_Molybdenum-iron_nitrogenase_complex


id: GOCC:0018995
description: Host cellular component
memo: https://amigo.geneontology.org/amigo/term/GO:0018995
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0018995_Host_cellular_component


id: GOCC:0019008
description: Molybdopterin synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0019008
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0019008_Molybdopterin_synthase_complex


id: GOCC:0019866
description: Organelle inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019866
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0019866_Organelle_inner_membrane


id: GOCC:0019897
description: Extrinsic component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019897
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0019897_Extrinsic_component_of_plasma_membrane


id: GOCC:0019898
description: Extrinsic component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019898
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0019898_Extrinsic_component_of_membrane


id: GOCC:0022625
description: Cytosolic large ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0022625
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0022625_Cytosolic_large_ribosomal_subunit


id: GOCC:0022626
description: Cytosolic ribosome
memo: https://amigo.geneontology.org/amigo/term/GO:0022626
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0022626_Cytosolic_ribosome


id: GOCC:0022627
description: Cytosolic small ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0022627
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0022627_Cytosolic_small_ribosomal_subunit


id: GOCC:0030076
description: Light-harvesting complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030076
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0030076_Light-harvesting_complex


id: GOCC:0030077
description: Plasma membrane light-harvesting complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030077
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0030077_Plasma_membrane_light-harvesting_complex


id: GOCC:0030139
description: Endocytic vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0030139
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0030139_Endocytic_vesicle


id: GOCC:0030257
description: Type III protein secretion system complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030257
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0030257_Type_III_protein_secretion_system_complex


id: GOCC:0030288
description: Outer membrane-bounded periplasmic space
memo: https://amigo.geneontology.org/amigo/term/GO:0030288
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0030288_Outer_membrane-bounded_periplasmic_space


id: GOCC:0030312
description: External encapsulating structure
memo: https://amigo.geneontology.org/amigo/term/GO:0030312
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0030312_External_encapsulating_structure


id: GOCC:0030659
description: Cytoplasmic vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030659
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0030659_Cytoplasmic_vesicle_membrane


id: GOCC:0030677
description: Ribonuclease P complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030677
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0030677_Ribonuclease_P_complex


id: GOCC:0030694
description: Bacterial-type flagellum basal body, rod
memo: https://amigo.geneontology.org/amigo/term/GO:0030694
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0030694_Bacterial-type_flagellum_basal_body,_rod


id: GOCC:0030880
description: RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030880
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0030880_RNA_polymerase_complex


id: GOCC:0030956
description: glutamyl-tRNA(Gln) amidotransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030956
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0030956_glutamyl-tRNA(Gln)_amidotransferase_complex


id: GOCC:0030964
description: NADH dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030964
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0030964_NADH_dehydrogenase_complex


id: GOCC:0031012
description: Extracellular matrix
memo: https://amigo.geneontology.org/amigo/term/GO:0031012
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0031012_Extracellular_matrix


id: GOCC:0031090
description: Organelle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031090
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0031090_Organelle_membrane


id: GOCC:0031224
description: Intrinsic component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031224
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0031224_Intrinsic_component_of_membrane


id: GOCC:0031225
description: Anchored component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031225
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0031225_Anchored_component_of_membrane


id: GOCC:0031226
description: Intrinsic component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031226
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0031226_Intrinsic_component_of_plasma_membrane


id: GOCC:0031250
description: Anaerobic ribonucleoside-triphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031250
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0031250_Anaerobic_ribonucleoside-triphosphate_reductase_complex


id: GOCC:0031300
description: Intrinsic component of organelle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031300
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0031300_Intrinsic_component_of_organelle_membrane


id: GOCC:0031301
description: Integral component of organelle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031301
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0031301_Integral_component_of_organelle_membrane


id: GOCC:0031304
description: Intrinsic component of mitochondrial inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031304
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0031304_Intrinsic_component_of_mitochondrial_inner_membrane


id: GOCC:0031305
description: Integral component of mitochondrial inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031305
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0031305_Integral_component_of_mitochondrial_inner_membrane


id: GOCC:0031317
description: Tripartite ATP-independent periplasmic transporter complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031317
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0031317_Tripartite_ATP-independent_periplasmic_transporter_complex


id: GOCC:0031410
description: Cytoplasmic vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0031410
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0031410_Cytoplasmic_vesicle


id: GOCC:0031469
description: Polyhedral organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0031469
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0031469_Polyhedral_organelle


id: GOCC:0031471
description: Ethanolamine degradation polyhedral organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0031471
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0031471_Ethanolamine_degradation_polyhedral_organelle


id: GOCC:0031515
description: tRNA (m1A) methyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031515
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0031515_tRNA_(m1A)_methyltransferase_complex


id: GOCC:0031522
description: Cell envelope Sec protein transport complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031522
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0031522_Cell_envelope_Sec_protein_transport_complex


id: GOCC:0031588
description: Nucleotide-activated protein kinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031588
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0031588_Nucleotide-activated_protein_kinase_complex


id: GOCC:0031597
description: Cytosolic proteasome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031597
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0031597_Cytosolic_proteasome_complex


id: GOCC:0031901
description: Early endosome membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031901
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0031901_Early_endosome_membrane


id: GOCC:0031966
description: Mitochondrial membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031966
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0031966_Mitochondrial_membrane


id: GOCC:0031967
description: Organelle envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0031967
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0031967_Organelle_envelope


id: GOCC:0031968
description: Organelle outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031968
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0031968_Organelle_outer_membrane


id: GOCC:0031974
description: Membrane-enclosed lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0031974
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0031974_Membrane-enclosed_lumen


id: GOCC:0031984
description: Organelle subcompartment
memo: https://amigo.geneontology.org/amigo/term/GO:0031984
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0031984_Organelle_subcompartment


id: GOCC:0032153
description: Cell division site
memo: https://amigo.geneontology.org/amigo/term/GO:0032153
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0032153_Cell_division_site


id: GOCC:0032299
description: Ribonuclease H2 complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032299
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0032299_Ribonuclease_H2_complex


id: GOCC:0032300
description: Mismatch repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032300
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0032300_Mismatch_repair_complex


id: GOCC:0032592
description: Integral component of mitochondrial membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0032592
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0032592_Integral_component_of_mitochondrial_membrane


id: GOCC:0032991
description: Protein-containing complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032991
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0032991_Protein-containing_complex


id: GOCC:0032993
description: protein-DNA complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032993
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0032993_protein-DNA_complex


id: GOCC:0033176
description: Proton-transporting V-type ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0033176
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0033176_Proton-transporting_V-type_ATPase_complex


id: GOCC:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GOCC:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GOCC:0033179
description: Proton-transporting V-type ATPase, V0 domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033179
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0033179_Proton-transporting_V-type_ATPase,_V0_domain


id: GOCC:0033180
description: Proton-transporting V-type ATPase, V1 domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033180
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0033180_Proton-transporting_V-type_ATPase,_V1_domain


id: GOCC:0033202
description: DNA helicase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0033202
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0033202_DNA_helicase_complex


id: GOCC:0034357
description: Photosynthetic membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0034357
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0034357_Photosynthetic_membrane


id: GOCC:0034702
description: Ion channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034702
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0034702_Ion_channel_complex


id: GOCC:0034703
description: Cation channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034703
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0034703_Cation_channel_complex


id: GOCC:0034705
description: Potassium channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034705
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0034705_Potassium_channel_complex


id: GOCC:0034707
description: Chloride channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034707
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0034707_Chloride_channel_complex


id: GOCC:0034708
description: Methyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034708
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0034708_Methyltransferase_complex


id: GOCC:0035861
description: Site of double-strand break
memo: https://amigo.geneontology.org/amigo/term/GO:0035861
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0035861_Site_of_double-strand_break


id: GOCC:0036125
description: Fatty acid beta-oxidation multienzyme complex
memo: https://amigo.geneontology.org/amigo/term/GO:0036125
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0036125_Fatty_acid_beta-oxidation_multienzyme_complex


id: GOCC:0042175
description: Nuclear outer membrane-endoplasmic reticulum membrane network
memo: https://amigo.geneontology.org/amigo/term/GO:0042175
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0042175_Nuclear_outer_membrane-endoplasmic_reticulum_membrane_network


id: GOCC:0042575
description: DNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0042575
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0042575_DNA_polymerase_complex


id: GOCC:0042597
description: Periplasmic space
memo: https://amigo.geneontology.org/amigo/term/GO:0042597
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0042597_Periplasmic_space


id: GOCC:0042601
description: Endospore-forming forespore
memo: https://amigo.geneontology.org/amigo/term/GO:0042601
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0042601_Endospore-forming_forespore


id: GOCC:0042651
description: Thylakoid membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0042651
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0042651_Thylakoid_membrane


id: GOCC:0042716
description: Plasma membrane-derived chromatophore
memo: https://amigo.geneontology.org/amigo/term/GO:0042716
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0042716_Plasma_membrane-derived_chromatophore


id: GOCC:0042717
description: Plasma membrane-derived chromatophore membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0042717
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0042717_Plasma_membrane-derived_chromatophore_membrane


id: GOCC:0042763
description: Intracellular immature spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042763
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0042763_Intracellular_immature_spore


id: GOCC:0043190
description: ATP-binding cassette (ABC) transporter complex
memo: https://amigo.geneontology.org/amigo/term/GO:0043190
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0043190_ATP-binding_cassette_(ABC)_transporter_complex


id: GOCC:0043227
description: Membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043227
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0043227_Membrane-bounded_organelle


id: GOCC:0043228
description: Non-membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043228
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0043228_Non-membrane-bounded_organelle


id: GOCC:0043229
description: Intracellular organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043229
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0043229_Intracellular_organelle


id: GOCC:0043230
description: Extracellular organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043230
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0043230_Extracellular_organelle


id: GOCC:0043231
description: Intracellular membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043231
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0043231_Intracellular_membrane-bounded_organelle


id: GOCC:0043232
description: Intracellular non-membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043232
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0043232_Intracellular_non-membrane-bounded_organelle


id: GOCC:0043527
description: tRNA methyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0043527
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0043527_tRNA_methyltransferase_complex


id: GOCC:0043590
description: Bacterial nucleoid
memo: https://amigo.geneontology.org/amigo/term/GO:0043590
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0043590_Bacterial_nucleoid


id: GOCC:0044391
description: Ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0044391
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0044391_Ribosomal_subunit


id: GOCC:0044815
description: DNA packaging complex
memo: https://amigo.geneontology.org/amigo/term/GO:0044815
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0044815_DNA_packaging_complex


id: GOCC:0045111
description: Intermediate filament cytoskeleton
memo: https://amigo.geneontology.org/amigo/term/GO:0045111
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0045111_Intermediate_filament_cytoskeleton


id: GOCC:0045239
description: Tricarboxylic acid cycle enzyme complex
memo: https://amigo.geneontology.org/amigo/term/GO:0045239
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0045239_Tricarboxylic_acid_cycle_enzyme_complex


id: GOCC:0045259
description: Proton-transporting ATP synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0045259
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0045259_Proton-transporting_ATP_synthase_complex


id: GOCC:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GOCC:0045271
description: Respiratory chain complex I
memo: https://amigo.geneontology.org/amigo/term/GO:0045271
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0045271_Respiratory_chain_complex_I


id: GOCC:0045272
description: Plasma membrane respiratory chain complex I
memo: https://amigo.geneontology.org/amigo/term/GO:0045272
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0045272_Plasma_membrane_respiratory_chain_complex_I


id: GOCC:0045335
description: Phagocytic vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0045335
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0045335_Phagocytic_vesicle


id: GOCC:0046658
description: Anchored component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0046658
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0046658_Anchored_component_of_plasma_membrane


id: GOCC:0046821
description: Extrachromosomal DNA
memo: https://amigo.geneontology.org/amigo/term/GO:0046821
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0046821_Extrachromosomal_DNA


id: GOCC:0048476
description: Holliday junction resolvase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0048476
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0048476_Holliday_junction_resolvase_complex


id: GOCC:0048500
description: Signal recognition particle
memo: https://amigo.geneontology.org/amigo/term/GO:0048500
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0048500_Signal_recognition_particle


id: GOCC:0055040
description: Periplasmic flagellum
memo: https://amigo.geneontology.org/amigo/term/GO:0055040
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0055040_Periplasmic_flagellum


id: GOCC:0055052
description: ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing
memo: https://amigo.geneontology.org/amigo/term/GO:0055052
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0055052_ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing


id: GOCC:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GOCC:0065010
description: Extracellular membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0065010
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0065010_Extracellular_membrane-bounded_organelle


id: GOCC:0070013
description: Intracellular organelle lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0070013
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0070013_Intracellular_organelle_lumen


id: GOCC:0070062
description: Extracellular exosome
memo: https://amigo.geneontology.org/amigo/term/GO:0070062
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0070062_Extracellular_exosome


id: GOCC:0070161
description: Anchoring junction
memo: https://amigo.geneontology.org/amigo/term/GO:0070161
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0070161_Anchoring_junction


id: GOCC:0070470
description: Plasma membrane respirasome
memo: https://amigo.geneontology.org/amigo/term/GO:0070470
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0070470_Plasma_membrane_respirasome


id: GOCC:0090734
description: Site of DNA damage
memo: https://amigo.geneontology.org/amigo/term/GO:0090734
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0090734_Site_of_DNA_damage


id: GOCC:0097708
description: Intracellular vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0097708
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0097708_Intracellular_vesicle


id: GOCC:0098533
description: ATPase dependent transmembrane transport complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098533
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0098533_ATPase_dependent_transmembrane_transport_complex


id: GOCC:0098561
description: Methyl accepting chemotaxis protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098561
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0098561_Methyl_accepting_chemotaxis_protein_complex


id: GOCC:0098562
description: Cytoplasmic side of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0098562
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0098562_Cytoplasmic_side_of_membrane


id: GOCC:0098573
description: Intrinsic component of mitochondrial membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0098573
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0098573_Intrinsic_component_of_mitochondrial_membrane


id: GOCC:0098588
description: Bounding membrane of organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0098588
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0098588_Bounding_membrane_of_organelle


id: GOCC:0098636
description: Protein complex involved in cell adhesion
memo: https://amigo.geneontology.org/amigo/term/GO:0098636
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0098636_Protein_complex_involved_in_cell_adhesion


id: GOCC:0098796
description: Membrane protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098796
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0098796_Membrane_protein_complex


id: GOCC:0098797
description: Plasma membrane protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098797
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0098797_Plasma_membrane_protein_complex


id: GOCC:0098798
description: Mitochondrial protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098798
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0098798_Mitochondrial_protein_complex


id: GOCC:0098800
description: Inner mitochondrial membrane protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098800
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0098800_Inner_mitochondrial_membrane_protein_complex


id: GOCC:0098802
description: Plasma membrane signaling receptor complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098802
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0098802_Plasma_membrane_signaling_receptor_complex


id: GOCC:0098803
description: Respiratory chain complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098803
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0098803_Respiratory_chain_complex


id: GOCC:0098827
description: Endoplasmic reticulum subcompartment
memo: https://amigo.geneontology.org/amigo/term/GO:0098827
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0098827_Endoplasmic_reticulum_subcompartment


id: GOCC:0098857
description: Membrane microdomain
memo: https://amigo.geneontology.org/amigo/term/GO:0098857
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0098857_Membrane_microdomain


id: GOCC:0099023
description: Vesicle tethering complex
memo: https://amigo.geneontology.org/amigo/term/GO:0099023
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0099023_Vesicle_tethering_complex


id: GOCC:0099080
description: Supramolecular complex
memo: https://amigo.geneontology.org/amigo/term/GO:0099080
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0099080_Supramolecular_complex


id: GOCC:0099081
description: Supramolecular polymer
memo: https://amigo.geneontology.org/amigo/term/GO:0099081
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0099081_Supramolecular_polymer


id: GOCC:0099512
description: Supramolecular fiber
memo: https://amigo.geneontology.org/amigo/term/GO:0099512
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0099512_Supramolecular_fiber


id: GOCC:0099513
description: Polymeric cytoskeletal fiber
memo: https://amigo.geneontology.org/amigo/term/GO:0099513
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0099513_Polymeric_cytoskeletal_fiber


id: GOCC:0110165
description: Cellular anatomical entity
memo: https://amigo.geneontology.org/amigo/term/GO:0110165
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:0110165_Cellular_anatomical_entity


id: GOCC:1902494
description: Catalytic complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902494
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:1902494_Catalytic_complex


id: GOCC:1902495
description: Transmembrane transporter complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902495
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:1902495_Transmembrane_transporter_complex


id: GOCC:1902503
description: Adenylyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902503
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:1902503_Adenylyltransferase_complex


id: GOCC:1902555
description: Endoribonuclease complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902555
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:1902555_Endoribonuclease_complex


id: GOCC:1902911
description: Protein kinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902911
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:1902911_Protein_kinase_complex


id: GOCC:1903561
description: Extracellular vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:1903561
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:1903561_Extracellular_vesicle


id: GOCC:1905347
description: Endodeoxyribonuclease complex
memo: https://amigo.geneontology.org/amigo/term/GO:1905347
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:1905347_Endodeoxyribonuclease_complex


id: GOCC:1905348
description: Endonuclease complex
memo: https://amigo.geneontology.org/amigo/term/GO:1905348
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:1905348_Endonuclease_complex


id: GOCC:1905368
description: Peptidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1905368
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:1905368_Peptidase_complex


id: GOCC:1905369
description: Endopeptidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1905369
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:1905369_Endopeptidase_complex


id: GOCC:1990065
description: Dxr protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990065
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:1990065_Dxr_protein_complex


id: GOCC:1990077
description: Primosome complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990077
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:1990077_Primosome_complex


id: GOCC:1990204
description: Oxidoreductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990204
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:1990204_Oxidoreductase_complex


id: GOCC:1990221
description: L-cysteine desulfurase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990221
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:1990221_L-cysteine_desulfurase_complex


id: GOCC:1990228
description: Sulfurtransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990228
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:1990228_Sulfurtransferase_complex


id: GOCC:1990229
description: Iron-sulfur cluster assembly complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990229
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:1990229_Iron-sulfur_cluster_assembly_complex


id: GOCC:1990234
description: Transferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990234
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:1990234_Transferase_complex


id: GOCC:1990281
description: Efflux pump complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990281
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:1990281_Efflux_pump_complex


id: GOCC:1990330
description: IscS-IscU complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990330
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:1990330_IscS-IscU_complex


id: GOCC:1990351
description: Transporter complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990351
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:1990351_Transporter_complex


id: GOCC:1990391
description: DNA repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990391
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:1990391_DNA_repair_complex


id: GOCC:1990904
description: Ribonucleoprotein complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990904
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1125701_STRINGid_GOCC:1990904_Ribonucleoprotein_complex


id: KW-0100
description: Branched-chain amino acid biosynthesis
name:
  Annotated Keywords (UniProt).STRING_v12.0_1125701_STRINGid_KW-0100_Branched-chain_amino_acid_biosynthesis


id: KW-1006
description: Bacterial flagellum protein export
name:
  Annotated Keywords (UniProt).STRING_v12.0_1125701_STRINGid_KW-1006_Bacterial_flagellum_protein_export


id: MAP-1222499
description: Latent infection - Other responses of Mtb to phagocytosis
memo: https://reactome.org/content/detail/MAP-1222499
name:
  Reactome Pathways.STRING_v12.0_1125701_STRINGid_MAP-1222499_Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis


id: MAP-166058
description: MyD88:MAL(TIRAP) cascade initiated on plasma membrane
memo: https://reactome.org/content/detail/MAP-166058
name:
  Reactome Pathways.STRING_v12.0_1125701_STRINGid_MAP-166058_MyD88:MAL(TIRAP)_cascade_initiated_on_plasma_membrane


id: MAP-8876384
description: Listeria monocytogenes entry into host cells
memo: https://reactome.org/content/detail/MAP-8876384
name:
  Reactome Pathways.STRING_v12.0_1125701_STRINGid_MAP-8876384_Listeria_monocytogenes_entry_into_host_cells


id: MAP-9635486
description: Infection with Mycobacterium tuberculosis
memo: https://reactome.org/content/detail/MAP-9635486
name:
  Reactome Pathways.STRING_v12.0_1125701_STRINGid_MAP-9635486_Infection_with_Mycobacterium_tuberculosis


id: MAP-9636383
description: Prevention of phagosomal-lysosomal fusion
memo: https://reactome.org/content/detail/MAP-9636383
name:
  Reactome Pathways.STRING_v12.0_1125701_STRINGid_MAP-9636383_Prevention_of_phagosomal-lysosomal_fusion


id: MAP-975871
description: MyD88 cascade initiated on plasma membrane
memo: https://reactome.org/content/detail/MAP-975871
name:
  Reactome Pathways.STRING_v12.0_1125701_STRINGid_MAP-975871_MyD88_cascade_initiated_on_plasma_membrane


id: MAP-983169
description: Class I MHC mediated antigen processing & presentation
memo: https://reactome.org/content/detail/MAP-983169
name:
  Reactome Pathways.STRING_v12.0_1125701_STRINGid_MAP-983169_Class_I_MHC_mediated_antigen_processing_&_presentation


id: PF00006
description: ATP synthase alpha/beta family, nucleotide-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00006
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00006_ATP_synthase_alpha/beta_family,_nucleotide-binding_domain


id: PF00009
description: Elongation factor Tu GTP binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00009
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00009_Elongation_factor_Tu_GTP_binding_domain


id: PF00056
description: Lactate/malate dehydrogenase, NAD binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00056
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00056_Lactate/malate_dehydrogenase,_NAD_binding_domain


id: PF00070
description: Pyridine nucleotide-disulphide oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00070
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00070_Pyridine_nucleotide-disulphide_oxidoreductase


id: PF00109
description: Beta-ketoacyl synthase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00109
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00109_Beta-ketoacyl_synthase,_N-terminal_domain


id: PF00111
description: 2Fe-2S iron-sulfur cluster binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00111
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00111_2Fe-2S_iron-sulfur_cluster_binding_domain


id: PF00126
description: Bacterial regulatory helix-turn-helix protein, lysR family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00126
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00126_Bacterial_regulatory_helix-turn-helix_protein,_lysR_family


id: PF00132
description: Bacterial transferase hexapeptide (six repeats)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00132
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00132_Bacterial_transferase_hexapeptide_(six_repeats)


id: PF00148
description: Nitrogenase component 1 type Oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00148
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00148_Nitrogenase_component_1_type_Oxidoreductase


id: PF00152
description: tRNA synthetases class II (D, K and N)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00152
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00152_tRNA_synthetases_class_II_(D,_K_and_N)_


id: PF00160
description: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00160
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00160_Cyclophilin_type_peptidyl-prolyl_cis-trans_isomerase/CLD


id: PF00185
description: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00185
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00185_Aspartate/ornithine_carbamoyltransferase,_Asp/Orn_binding_domain


id: PF00201
description: UDP-glucoronosyl and UDP-glucosyl transferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00201
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00201_UDP-glucoronosyl_and_UDP-glucosyl_transferase


id: PF00205
description: Thiamine pyrophosphate enzyme, central domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00205
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00205_Thiamine_pyrophosphate_enzyme,_central_domain


id: PF00209
description: Sodium:neurotransmitter symporter family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00209
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00209_Sodium:neurotransmitter_symporter_family


id: PF00211
description: Adenylate and Guanylate cyclase catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00211
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00211_Adenylate_and_Guanylate_cyclase_catalytic_domain


id: PF00217
description: ATP:guanido phosphotransferase, C-terminal catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00217
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00217_ATP:guanido_phosphotransferase,_C-terminal_catalytic_domain


id: PF00254
description: FKBP-type peptidyl-prolyl cis-trans isomerase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00254
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00254_FKBP-type_peptidyl-prolyl_cis-trans_isomerase


id: PF00263
description: Bacterial type II and III secretion system protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00263
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00263_Bacterial_type_II_and_III_secretion_system_protein


id: PF00275
description: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00275
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00275_EPSP_synthase_(3-phosphoshikimate_1-carboxyvinyltransferase)


id: PF00309
description: Sigma-54 factor, Activator interacting domain (AID)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00309
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00309_Sigma-54_factor,_Activator_interacting_domain_(AID)_


id: PF00333
description: Ribosomal protein S5, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00333
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00333_Ribosomal_protein_S5,_N-terminal_domain


id: PF00356
description: Bacterial regulatory proteins, lacI family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00356
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00356_Bacterial_regulatory_proteins,_lacI_family


id: PF00359
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00359
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00359_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system,_EIIA_2


id: PF00370
description: FGGY family of carbohydrate kinases, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00370
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00370_FGGY_family_of_carbohydrate_kinases,_N-terminal_domain


id: PF00383
description: Cytidine and deoxycytidylate deaminase zinc-binding region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00383
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00383_Cytidine_and_deoxycytidylate_deaminase_zinc-binding_region


id: PF00408
description: Phosphoglucomutase/phosphomannomutase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00408
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00408_Phosphoglucomutase/phosphomannomutase,_C-terminal_domain


id: PF00438
description: S-adenosylmethionine synthetase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00438
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00438_S-adenosylmethionine_synthetase,_N-terminal_domain


id: PF00440
description: Bacterial regulatory proteins, tetR family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00440
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00440_Bacterial_regulatory_proteins,_tetR_family


id: PF00456
description: Transketolase, thiamine diphosphate binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00456
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00456_Transketolase,_thiamine_diphosphate_binding_domain


id: PF00475
description: Imidazoleglycerol-phosphate dehydratase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00475
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00475_Imidazoleglycerol-phosphate_dehydratase


id: PF00482
description: Type II secretion system (T2SS), protein F
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00482
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00482_Type_II_secretion_system_(T2SS),_protein_F


id: PF00496
description: Bacterial extracellular solute-binding proteins, family 5 Middle
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00496
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00496_Bacterial_extracellular_solute-binding_proteins,_family_5_Middle


id: PF00497
description: Bacterial extracellular solute-binding proteins, family 3
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00497
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00497_Bacterial_extracellular_solute-binding_proteins,_family_3


id: PF00528
description: Binding-protein-dependent transport system inner membrane component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00528
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00528_Binding-protein-dependent_transport_system_inner_membrane_component


id: PF00542
description: Ribosomal protein L7/L12 C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00542
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00542_Ribosomal_protein_L7/L12_C-terminal_domain


id: PF00584
description: SecE/Sec61-gamma subunits of protein translocation complex
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00584
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00584_SecE/Sec61-gamma_subunits_of_protein_translocation_complex


id: PF00586
description: AIR synthase related protein, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00586
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00586_AIR_synthase_related_protein,_N-terminal_domain


id: PF00587
description: tRNA synthetase class II core domain (G, H, P, S and T)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00587
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00587_tRNA_synthetase_class_II_core_domain_(G,_H,_P,_S_and_T)


id: PF00590
description: Tetrapyrrole (Corrin/Porphyrin) Methylases
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00590
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00590_Tetrapyrrole_(Corrin/Porphyrin)_Methylases


id: PF00591
description: Glycosyl transferase family, a/b domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00591
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00591_Glycosyl_transferase_family,_a/b_domain


id: PF00669
description: Bacterial flagellin N-terminal helical region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00669
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00669_Bacterial_flagellin_N-terminal_helical_region


id: PF00700
description: Bacterial flagellin C-terminal helical region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00700
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00700_Bacterial_flagellin_C-terminal_helical_region


id: PF00707
description: Translation initiation factor IF-3, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00707
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00707_Translation_initiation_factor_IF-3,_C-terminal_domain


id: PF00725
description: 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00725
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00725_3-hydroxyacyl-CoA_dehydrogenase,_C-terminal_domain


id: PF00749
description: tRNA synthetases class I (E and Q), catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00749
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00749_tRNA_synthetases_class_I_(E_and_Q),_catalytic_domain


id: PF00763
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00763
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00763_Tetrahydrofolate_dehydrogenase/cyclohydrolase,_catalytic_domain


id: PF00828
description: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00828
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00828_Ribosomal_proteins_50S-L15,_50S-L18e,_60S-L27A


id: PF00861
description: Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00861
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00861_Ribosomal_L18_of_archaea,_bacteria,_mitoch._and_chloroplast


id: PF00905
description: Penicillin binding protein transpeptidase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00905
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00905_Penicillin_binding_protein_transpeptidase_domain


id: PF00933
description: Glycosyl hydrolase family 3 N terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00933
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00933_Glycosyl_hydrolase_family_3_N_terminal_domain


id: PF00939
description: Sodium:sulfate symporter transmembrane region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00939
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00939_Sodium:sulfate_symporter_transmembrane_region


id: PF00941
description: FAD binding domain in molybdopterin dehydrogenase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00941
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00941_FAD_binding_domain_in_molybdopterin_dehydrogenase


id: PF00984
description: UDP-glucose/GDP-mannose dehydrogenase family, central domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00984
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF00984_UDP-glucose/GDP-mannose_dehydrogenase_family,_central_domain


id: PF01035
description: 6-O-methylguanine DNA methyltransferase, DNA binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01035
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01035_6-O-methylguanine_DNA_methyltransferase,_DNA_binding_domain


id: PF01041
description: DegT/DnrJ/EryC1/StrS aminotransferase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01041
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01041_DegT/DnrJ/EryC1/StrS_aminotransferase_family


id: PF01052
description: Type III flagellar switch regulator (C-ring) FliN C-term
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01052
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01052_Type_III_flagellar_switch_regulator_(C-ring)_FliN_C-term


id: PF01053
description: Cys/Met metabolism PLP-dependent enzyme
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01053
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01053_Cys/Met_metabolism_PLP-dependent_enzyme


id: PF01071
description: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01071
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01071_Phosphoribosylglycinamide_synthetase,_ATP-grasp_(A)_domain


id: PF01113
description: Dihydrodipicolinate reductase, N-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01113
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01113_Dihydrodipicolinate_reductase,_N-terminus


id: PF01116
description: Fructose-bisphosphate aldolase class-II
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01116
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01116_Fructose-bisphosphate_aldolase_class-II


id: PF01128
description: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01128
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01128_2-C-methyl-D-erythritol_4-phosphate_cytidylyltransferase


id: PF01156
description: Inosine-uridine preferring nucleoside hydrolase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01156
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01156_Inosine-uridine_preferring_nucleoside_hydrolase


id: PF01161
description: Phosphatidylethanolamine-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01161
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01161_Phosphatidylethanolamine-binding_protein


id: PF01182
description: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01182
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01182_Glucosamine-6-phosphate_isomerases/6-phosphogluconolactonase


id: PF01210
description: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01210
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01210_NAD-dependent_glycerol-3-phosphate_dehydrogenase_N-terminus


id: PF01255
description: Putative undecaprenyl diphosphate synthase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01255
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01255_Putative_undecaprenyl_diphosphate_synthase


id: PF01258
description: Prokaryotic dksA/traR C4-type zinc finger
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01258
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01258_Prokaryotic_dksA/traR_C4-type_zinc_finger


id: PF01262
description: Alanine dehydrogenase/PNT, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01262
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01262_Alanine_dehydrogenase/PNT,_C-terminal_domain


id: PF01272
description: Transcription elongation factor, GreA/GreB, C-term
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01272
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01272_Transcription_elongation_factor,_GreA/GreB,_C-term


id: PF01281
description: Ribosomal protein L9, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01281
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01281_Ribosomal_protein_L9,_N-terminal_domain


id: PF01288
description: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01288
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01288_7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase_(HPPK)


id: PF01297
description: Zinc-uptake complex component A periplasmic
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01297
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01297_Zinc-uptake_complex_component_A_periplasmic


id: PF01326
description: Pyruvate phosphate dikinase, AMP/ATP-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01326
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01326_Pyruvate_phosphate_dikinase,_AMP/ATP-binding_domain


id: PF01370
description: NAD dependent epimerase/dehydratase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01370
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01370_NAD_dependent_epimerase/dehydratase_family


id: PF01396
description: Topoisomerase DNA binding C4 zinc finger
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01396
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01396_Topoisomerase_DNA_binding_C4_zinc_finger


id: PF01406
description: tRNA synthetases class I (C) catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01406
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01406_tRNA_synthetases_class_I_(C)_catalytic_domain


id: PF01408
description: Oxidoreductase family, NAD-binding Rossmann fold
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01408
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01408_Oxidoreductase_family,_NAD-binding_Rossmann_fold


id: PF01409
description: tRNA synthetases class II core domain (F)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01409
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01409_tRNA_synthetases_class_II_core_domain_(F)


id: PF01450
description: Acetohydroxy acid isomeroreductase, catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01450
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01450_Acetohydroxy_acid_isomeroreductase,_catalytic_domain


id: PF01503
description: Phosphoribosyl-ATP pyrophosphohydrolase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01503
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01503_Phosphoribosyl-ATP_pyrophosphohydrolase


id: PF01509
description: TruB family pseudouridylate synthase (N terminal domain)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01509
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01509_TruB_family_pseudouridylate_synthase_(N_terminal_domain)


id: PF01512
description: Respiratory-chain NADH dehydrogenase 51 Kd subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01512
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01512_Respiratory-chain_NADH_dehydrogenase_51_Kd_subunit


id: PF01547
description: Bacterial extracellular solute-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01547
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01547_Bacterial_extracellular_solute-binding_protein


id: PF01558
description: Pyruvate ferredoxin/flavodoxin oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01558
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01558_Pyruvate_ferredoxin/flavodoxin_oxidoreductase


id: PF01648
description: 4-phosphopantetheinyl transferase superfamily
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01648
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01648_4-phosphopantetheinyl_transferase_superfamily


id: PF01656
description: CobQ/CobB/MinD/ParA nucleotide binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01656
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01656_CobQ/CobB/MinD/ParA_nucleotide_binding_domain


id: PF01741
description: Large-conductance mechanosensitive channel, MscL
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01741
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01741_Large-conductance_mechanosensitive_channel,_MscL


id: PF01790
description: Prolipoprotein diacylglyceryl transferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01790
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01790_Prolipoprotein_diacylglyceryl_transferase


id: PF01812
description: 5-formyltetrahydrofolate cyclo-ligase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01812
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01812_5-formyltetrahydrofolate_cyclo-ligase_family


id: PF01832
description: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01832
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01832_Mannosyl-glycoprotein_endo-beta-N-acetylglucosaminidase


id: PF01855
description: Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01855
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01855_Pyruvate_flavodoxin/ferredoxin_oxidoreductase,_thiamine_diP-bdg


id: PF01948
description: Aspartate carbamoyltransferase regulatory chain, allosteric domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01948
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01948_Aspartate_carbamoyltransferase_regulatory_chain,_allosteric_domain


id: PF01970
description: Tripartite tricarboxylate transporter TctA family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01970
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF01970_Tripartite_tricarboxylate_transporter_TctA_family


id: PF02005
description: N2,N2-dimethylguanosine tRNA methyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02005
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02005_N2,N2-dimethylguanosine_tRNA_methyltransferase


id: PF02049
description: Flagellar hook-basal body complex protein FliE
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02049
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02049_Flagellar_hook-basal_body_complex_protein_FliE


id: PF02075
description: Crossover junction endodeoxyribonuclease RuvC
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02075
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02075_Crossover_junction_endodeoxyribonuclease_RuvC


id: PF02082
description: Iron-dependent Transcriptional regulator
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02082
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02082_Iron-dependent_Transcriptional_regulator


id: PF02086
description: D12 class N6 adenine-specific DNA methyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02086
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02086_D12_class_N6_adenine-specific_DNA_methyltransferase


id: PF02120
description: Flagellar hook-length control protein FliK
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02120
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02120_Flagellar_hook-length_control_protein_FliK


id: PF02127
description: Aminopeptidase I zinc metalloprotease (M18)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02127
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02127_Aminopeptidase_I_zinc_metalloprotease_(M18)


id: PF02133
description: Permease for cytosine/purines, uracil, thiamine, allantoin
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02133
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02133_Permease_for_cytosine/purines,_uracil,_thiamine,_allantoin


id: PF02367
description: Threonylcarbamoyl adenosine biosynthesis protein TsaE
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02367
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02367_Threonylcarbamoyl_adenosine_biosynthesis_protein_TsaE


id: PF02403
description: Seryl-tRNA synthetase N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02403
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02403_Seryl-tRNA_synthetase_N-terminal_domain


id: PF02410
description: Ribosomal silencing factor during starvation
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02410
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02410_Ribosomal_silencing_factor_during_starvation_


id: PF02465
description: Flagellar hook-associated protein 2 N-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02465
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02465_Flagellar_hook-associated_protein_2_N-terminus


id: PF02482
description: Sigma 54 modulation protein / S30EA ribosomal protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02482
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02482_Sigma_54_modulation_protein_/_S30EA_ribosomal_protein


id: PF02492
description: CobW/HypB/UreG, nucleotide-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02492
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02492_CobW/HypB/UreG,_nucleotide-binding_domain


id: PF02511
description: Thymidylate synthase complementing protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02511
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02511_Thymidylate_synthase_complementing_protein


id: PF02578
description: Multi-copper polyphenol oxidoreductase laccase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02578
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02578_Multi-copper_polyphenol_oxidoreductase_laccase


id: PF02583
description: Metal-sensitive transcriptional repressor
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02583
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02583_Metal-sensitive_transcriptional_repressor


id: PF02588
description: Uncharacterised 5xTM membrane BCR, YitT family COG1284
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02588
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02588_Uncharacterised_5xTM_membrane_BCR,_YitT_family_COG1284


id: PF02604
description: Antitoxin Phd_YefM, type II toxin-antitoxin system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02604
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02604_Antitoxin_Phd_YefM,_type_II_toxin-antitoxin_system


id: PF02608
description: ABC transporter substrate-binding protein PnrA-like
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02608
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02608_ABC_transporter_substrate-binding_protein_PnrA-like


id: PF02616
description: Segregation and condensation protein ScpA
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02616
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02616_Segregation_and_condensation_protein_ScpA


id: PF02617
description: ATP-dependent Clp protease adaptor protein ClpS
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02617
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02617_ATP-dependent_Clp_protease_adaptor_protein_ClpS


id: PF02639
description: Uncharacterized BCR, YaiI/YqxD family COG1671
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02639
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02639_Uncharacterized_BCR,_YaiI/YqxD_family_COG1671


id: PF02653
description: Branched-chain amino acid transport system / permease component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02653
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02653_Branched-chain_amino_acid_transport_system_/_permease_component


id: PF02662
description: Methyl-viologen-reducing hydrogenase, delta subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02662
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02662_Methyl-viologen-reducing_hydrogenase,_delta_subunit


id: PF02670
description: 1-deoxy-D-xylulose 5-phosphate reductoisomerase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02670
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02670_1-deoxy-D-xylulose_5-phosphate_reductoisomerase


id: PF02729
description: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02729
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02729_Aspartate/ornithine_carbamoyltransferase,_carbamoyl-P_binding_domain


id: PF02737
description: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02737
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02737_3-hydroxyacyl-CoA_dehydrogenase,_NAD_binding_domain


id: PF02746
description: Mandelate racemase / muconate lactonizing enzyme, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02746
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02746_Mandelate_racemase_/_muconate_lactonizing_enzyme,_N-terminal_domain


id: PF02748
description: Aspartate carbamoyltransferase regulatory chain, metal binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02748
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02748_Aspartate_carbamoyltransferase_regulatory_chain,_metal_binding_domain


id: PF02769
description: AIR synthase related protein, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02769
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02769_AIR_synthase_related_protein,_C-terminal_domain


id: PF02772
description: S-adenosylmethionine synthetase, central domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02772
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02772_S-adenosylmethionine_synthetase,_central_domain


id: PF02773
description: S-adenosylmethionine synthetase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02773
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02773_S-adenosylmethionine_synthetase,_C-terminal_domain


id: PF02774
description: Semialdehyde dehydrogenase, dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02774
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02774_Semialdehyde_dehydrogenase,_dimerisation_domain


id: PF02775
description: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02775
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02775_Thiamine_pyrophosphate_enzyme,_C-terminal_TPP_binding_domain


id: PF02776
description: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02776
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02776_Thiamine_pyrophosphate_enzyme,_N-terminal_TPP_binding_domain


id: PF02782
description: FGGY family of carbohydrate kinases, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02782
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02782_FGGY_family_of_carbohydrate_kinases,_C-terminal_domain


id: PF02784
description: Pyridoxal-dependent decarboxylase, pyridoxal binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02784
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02784_Pyridoxal-dependent_decarboxylase,_pyridoxal_binding_domain


id: PF02786
description: Carbamoyl-phosphate synthase L chain, ATP binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02786
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02786_Carbamoyl-phosphate_synthase_L_chain,_ATP_binding_domain


id: PF02800
description: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02800
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02800_Glyceraldehyde_3-phosphate_dehydrogenase,_C-terminal_domain


id: PF02801
description: Beta-ketoacyl synthase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02801
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02801_Beta-ketoacyl_synthase,_C-terminal_domain


id: PF02812
description: Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02812
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02812_Glu/Leu/Phe/Val_dehydrogenase,_dimerisation_domain


id: PF02826
description: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02826
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02826_D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD_binding_domain


id: PF02844
description: Phosphoribosylglycinamide synthetase, N domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02844
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02844_Phosphoribosylglycinamide_synthetase,_N_domain


id: PF02852
description: Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02852
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02852_Pyridine_nucleotide-disulphide_oxidoreductase,_dimerisation_domain


id: PF02861
description: Clp amino terminal domain, pathogenicity island component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02861
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02861_Clp_amino_terminal_domain,_pathogenicity_island_component


id: PF02866
description: Lactate/malate dehydrogenase, alpha/beta C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02866
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02866_Lactate/malate_dehydrogenase,_alpha/beta_C-terminal_domain


id: PF02873
description: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02873
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02873_UDP-N-acetylenolpyruvoylglucosamine_reductase,_C-terminal_domain


id: PF02874
description: ATP synthase alpha/beta family, beta-barrel domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02874
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02874_ATP_synthase_alpha/beta_family,_beta-barrel_domain


id: PF02875
description: Mur ligase family, glutamate ligase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02875
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02875_Mur_ligase_family,_glutamate_ligase_domain


id: PF02878
description: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02878
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02878_Phosphoglucomutase/phosphomannomutase,_alpha/beta/alpha_domain_I


id: PF02879
description: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02879
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02879_Phosphoglucomutase/phosphomannomutase,_alpha/beta/alpha_domain_II


id: PF02880
description: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02880
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02880_Phosphoglucomutase/phosphomannomutase,_alpha/beta/alpha_domain_III


id: PF02881
description: SRP54-type protein, helical bundle domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02881
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02881_SRP54-type_protein,_helical_bundle_domain


id: PF02882
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02882
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02882_Tetrahydrofolate_dehydrogenase/cyclohydrolase,_NAD(P)-binding_domain


id: PF02885
description: Glycosyl transferase family, helical bundle domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02885
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02885_Glycosyl_transferase_family,_helical_bundle_domain


id: PF02894
description: Oxidoreductase family, C-terminal alpha/beta domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02894
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02894_Oxidoreductase_family,_C-terminal_alpha/beta_domain


id: PF02896
description: PEP-utilising enzyme, PEP-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02896
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02896_PEP-utilising_enzyme,_PEP-binding_domain


id: PF02903
description: Alpha amylase, N-terminal ig-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02903
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02903_Alpha_amylase,_N-terminal_ig-like_domain


id: PF02906
description: Iron only hydrogenase large subunit, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02906
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02906_Iron_only_hydrogenase_large_subunit,_C-terminal_domain


id: PF02922
description: Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02922
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02922_Carbohydrate-binding_module_48_(Isoamylase_N-terminal_domain)


id: PF02954
description: Bacterial regulatory protein, Fis family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02954
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF02954_Bacterial_regulatory_protein,_Fis_family


id: PF03009
description: Glycerophosphoryl diester phosphodiesterase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03009
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF03009_Glycerophosphoryl_diester_phosphodiesterase_family


id: PF03033
description: Glycosyltransferase family 28 N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03033
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF03033_Glycosyltransferase_family_28_N-terminal_domain


id: PF03083
description: Sugar efflux transporter for intercellular exchange
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03083
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF03083_Sugar_efflux_transporter_for_intercellular_exchange


id: PF03099
description: Biotin/lipoate A/B protein ligase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03099
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF03099_Biotin/lipoate_A/B_protein_ligase_family


id: PF03118
description: Bacterial RNA polymerase, alpha chain C terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03118
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF03118_Bacterial_RNA_polymerase,_alpha_chain_C_terminal_domain


id: PF03279
description: Bacterial lipid A biosynthesis acyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03279
name:
  Protein Domains (Pfam).STRING_v12.0_1125701_STRINGid_PF03279_Bacterial_lipid_A_biosynthesis_acyltransferase


