# geneInfo

ensembl_gene_id: SAMN05443428_101101
symbol: prfA
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 1 (bRF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: SAMN05443428_101104
symbol: prmC
gene_biotype: protein_coding
description:
  Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: SAMN05443428_101115
symbol: SKA75941.1
gene_biotype: protein_coding
description:
  Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.


ensembl_gene_id: SAMN05443428_101127
symbol: cutD
gene_biotype: protein_coding
description:
  Pyruvate formate lyase activating enzyme; Catalyzes activation of the choline trimethylamine-lyase CutC under anaerobic conditions by generation of an organic free radical on a glycine residue, via an homolytic cleavage of S-adenosyl-L-methionine (SAM).


ensembl_gene_id: SAMN05443428_101128
symbol: cutC
gene_biotype: protein_coding
description:
  Formate C-acetyltransferase; Glycine radical enzyme that catalyzes the cleavage of a C-N bond in choline, producing trimethylamine (TMA) and acetaldehyde. Belongs to the glycyl radical enzyme (GRE) family. CutC subfamily.


ensembl_gene_id: SAMN05443428_10113
symbol: SKA75408.1
gene_biotype: protein_coding
description:
  Ribosomal-protein-alanine N-acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.


ensembl_gene_id: SAMN05443428_101152
symbol: nagB
gene_biotype: protein_coding
description:
  Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.


ensembl_gene_id: SAMN05443428_101156
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: SAMN05443428_101159
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: SAMN05443428_101172
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: SAMN05443428_10118
symbol: SKA75435.1
gene_biotype: protein_coding
description:
  Riboflavin transporter FmnP; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family.


ensembl_gene_id: SAMN05443428_101190
symbol: SKA76408.1
gene_biotype: protein_coding
description:
  Carboxypeptidase Taq; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.


ensembl_gene_id: SAMN05443428_101191
symbol: SKA76412.1
gene_biotype: protein_coding
description:
  NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN05443428_101215
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: SAMN05443428_101233
symbol: SKA76625.1
gene_biotype: protein_coding
description:
  ABC-2 type transport system ATP-binding protein/lipopolysaccharide transport system ATP-binding protein.


ensembl_gene_id: SAMN05443428_101236
symbol: gmd
gene_biotype: protein_coding
description:
  GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.


ensembl_gene_id: SAMN05443428_101247
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: SAMN05443428_101249
symbol: rsmA
gene_biotype: protein_coding
description:
  Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: SAMN05443428_101250
symbol: rnmV
gene_biotype: protein_coding
description:
  RNAse M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.


ensembl_gene_id: SAMN05443428_101253
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: SAMN05443428_10126
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: SAMN05443428_101262
symbol: rsmI
gene_biotype: protein_coding
description:
  16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: SAMN05443428_101268
symbol: tmk
gene_biotype: protein_coding
description:
  dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: SAMN05443428_10135
symbol: secA
gene_biotype: protein_coding
description:
  Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: SAMN05443428_10136
symbol: hpf
gene_biotype: protein_coding
description:
  Putative sigma-54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: SAMN05443428_10139
symbol: recD2
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase, RecD/TraA family; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.


ensembl_gene_id: SAMN05443428_10149
symbol: nadE
gene_biotype: protein_coding
description:
  NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: SAMN05443428_1015
symbol: SKA75371.1
gene_biotype: protein_coding
description:
  Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN05443428_10152
symbol: SKA75586.1
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SAMN05443428_1016
symbol: rbsA
gene_biotype: protein_coding
description:
  Monosaccharide ABC transporter ATP-binding protein, CUT2 family; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.


ensembl_gene_id: SAMN05443428_10161
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: SAMN05443428_10162
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: SAMN05443428_10172
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: SAMN05443428_10180
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: SAMN05443428_10186
symbol: SKA75761.1
gene_biotype: protein_coding
description:
  Hemerythrin; Oxygen-binding protein. May be involved in a storage mechanism or for delivery to oxygen-requiring enzymes. The oxygen- binding site contains two iron atoms; Belongs to the hemerythrin family.


ensembl_gene_id: SAMN05443428_1019
symbol: pfp
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.


ensembl_gene_id: SAMN05443428_10190
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: SAMN05443428_10192
symbol: SKA75810.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: SAMN05443428_10195
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: SAMN05443428_10196
symbol: SKA75834.1
gene_biotype: protein_coding
description:
  Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: SAMN05443428_10197
symbol: SKA75839.1
gene_biotype: protein_coding
description:
  L-threonylcarbamoyladenylate synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: SAMN05443428_102101
symbol: SKA78183.1
gene_biotype: protein_coding
description:
  Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.


ensembl_gene_id: SAMN05443428_102102
symbol: SKA78189.1
gene_biotype: protein_coding
description:
  GGDEF domain-containing protein, diguanylate cyclase (c-di-GMP synthetase) or its enzymatically inactive variants.


ensembl_gene_id: SAMN05443428_102111
symbol: SKA78261.1
gene_biotype: protein_coding
description:
  CRISPR-associated exonuclease, Cas4 family; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.


ensembl_gene_id: SAMN05443428_102112
symbol: cas1
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Cas1 family; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: SAMN05443428_102113
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Cas2 family; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: SAMN05443428_10212
symbol: SKA77351.1
gene_biotype: protein_coding
description:
  Nucleoside ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN05443428_102125
symbol: SKA78392.1
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: SAMN05443428_102130
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: SAMN05443428_102131
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: SAMN05443428_102134
symbol: SKA78437.1
gene_biotype: protein_coding
description:
  Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: SAMN05443428_102136
symbol: ribBA
gene_biotype: protein_coding
description:
  3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: SAMN05443428_102137
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: SAMN05443428_102146
symbol: SKA78536.1
gene_biotype: protein_coding
description:
  Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.


ensembl_gene_id: SAMN05443428_102169
symbol: SKA78671.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.


ensembl_gene_id: SAMN05443428_10222
symbol: SKA77439.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains.


ensembl_gene_id: SAMN05443428_10231
symbol: mtaD
gene_biotype: protein_coding
description:
  5-methylthioadenosine/S-adenosylhomocysteine deaminase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family.


ensembl_gene_id: SAMN05443428_10232
symbol: mtnA
gene_biotype: protein_coding
description:
  Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: SAMN05443428_10244
symbol: panB
gene_biotype: protein_coding
description:
  Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: SAMN05443428_10245
symbol: panC
gene_biotype: protein_coding
description:
  Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: SAMN05443428_10246
symbol: panD
gene_biotype: protein_coding
description:
  L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: SAMN05443428_10249
symbol: SKA77685.1
gene_biotype: protein_coding
description:
  Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: SAMN05443428_10251
symbol: sigI
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily.


ensembl_gene_id: SAMN05443428_10259
symbol: rbsK
gene_biotype: protein_coding
description:
  Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: SAMN05443428_1026
symbol: hppA
gene_biotype: protein_coding
description:
  K(+)-stimulated pyrophosphate-energized sodium pump; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily.


ensembl_gene_id: SAMN05443428_10262
symbol: SKA77776.1
gene_biotype: protein_coding
description:
  Ribose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN05443428_10270
symbol: SKA77838.1
gene_biotype: protein_coding
description:
  NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN05443428_1029
symbol: xpt
gene_biotype: protein_coding
description:
  Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.


ensembl_gene_id: SAMN05443428_103104
symbol: SKA79642.1
gene_biotype: protein_coding
description:
  RNA polymerase sporulation-specific sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN05443428_103105
symbol: spoIIAB
gene_biotype: protein_coding
description:
  Stage II sporulation protein AB (anti-sigma F factor); Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.


ensembl_gene_id: SAMN05443428_103108
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: SAMN05443428_103116
symbol: SKA79721.1
gene_biotype: protein_coding
description:
  ATP-dependent helicase/nuclease subunit A; ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily.


ensembl_gene_id: SAMN05443428_103132
symbol: murJ
gene_biotype: protein_coding
description:
  Putative peptidoglycan lipid II flippase; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: SAMN05443428_103135
symbol: SKA79901.1
gene_biotype: protein_coding
description:
  N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.


ensembl_gene_id: SAMN05443428_103152
symbol: SKA80041.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: SAMN05443428_103163
symbol: SKA80123.1
gene_biotype: protein_coding
description:
  Pyruvate formate lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.


ensembl_gene_id: SAMN05443428_103168
symbol: SKA80153.1
gene_biotype: protein_coding
description:
  Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.


ensembl_gene_id: SAMN05443428_10321
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: SAMN05443428_1033
symbol: SKA79124.1
gene_biotype: protein_coding
description:
  Transcriptional regulatory protein; Two-component system, CitB family, response regulator/two-component system, CitB family, response regulator MalR.


ensembl_gene_id: SAMN05443428_10335
symbol: glmS
gene_biotype: protein_coding
description:
  Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: SAMN05443428_10337
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: SAMN05443428_10342
symbol: metN
gene_biotype: protein_coding
description:
  D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: SAMN05443428_10355
symbol: dacA
gene_biotype: protein_coding
description:
  Diadenylate cyclase; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: SAMN05443428_10361
symbol: SKA79425.1
gene_biotype: protein_coding
description:
  Conserved repeat domain-containing protein/fimbrial isopeptide formation D2 domain-containing protein.


ensembl_gene_id: SAMN05443428_10366
symbol: SKA79454.1
gene_biotype: protein_coding
description:
  Oxaloacetate decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).


ensembl_gene_id: SAMN05443428_10392
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.


ensembl_gene_id: SAMN05443428_10393
symbol: SKA79579.1
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: SAMN05443428_10410
symbol: tgt
gene_biotype: protein_coding
description:
  tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...]


ensembl_gene_id: SAMN05443428_104101
symbol: SKA81691.1
gene_biotype: protein_coding
description:
  Putative holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: SAMN05443428_104105
symbol: rnj
gene_biotype: protein_coding
description:
  Ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: SAMN05443428_104106
symbol: SKA81726.1
gene_biotype: protein_coding
description:
  UPF0342 protein SAMN05443428_104106; Cell fate regulator YlbF, YheA/YmcA/DUF963 family (controls sporulation, competence, biofilm development); Belongs to the UPF0342 family.


ensembl_gene_id: SAMN05443428_104109
symbol: mltG
gene_biotype: protein_coding
description:
  UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: SAMN05443428_104114
symbol: SKA81773.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 27/28 subunit, RpsK/SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN05443428_104116
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: SAMN05443428_104129
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: SAMN05443428_104131
symbol: efp
gene_biotype: protein_coding
description:
  Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: SAMN05443428_104144
symbol: nusB
gene_biotype: protein_coding
description:
  NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: SAMN05443428_104146
symbol: folD
gene_biotype: protein_coding
description:
  Methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: SAMN05443428_104147
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: SAMN05443428_104148
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: SAMN05443428_104153
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: SAMN05443428_104155
symbol: nadK
gene_biotype: protein_coding
description:
  NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: SAMN05443428_104159
symbol: SKA82070.1
gene_biotype: protein_coding
description:
  Two-component system, response regulator, stage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.


ensembl_gene_id: SAMN05443428_10416
symbol: secD
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: SAMN05443428_104164
symbol: xerC
gene_biotype: protein_coding
description:
  Integrase/recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: SAMN05443428_104165
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: SAMN05443428_104166
symbol: SKA82132.1
gene_biotype: protein_coding
description:
  Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: SAMN05443428_104169
symbol: SKA82156.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.


ensembl_gene_id: SAMN05443428_10417
symbol: secF
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: SAMN05443428_104184
symbol: scpA
gene_biotype: protein_coding
description:
  Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: SAMN05443428_104185
symbol: scpB
gene_biotype: protein_coding
description:
  Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: SAMN05443428_10434
symbol: SKA81241.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: SAMN05443428_10443
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: SAMN05443428_10444
symbol: SKA81321.1
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: SAMN05443428_10445
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: SAMN05443428_10450
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: SAMN05443428_10454
symbol: glyA
gene_biotype: protein_coding
description:
  Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: SAMN05443428_1046
symbol: ruvC
gene_biotype: protein_coding
description:
  Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: SAMN05443428_10463
symbol: thiI
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.


ensembl_gene_id: SAMN05443428_10469
symbol: SKA81499.1
gene_biotype: protein_coding
description:
  Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: SAMN05443428_1047
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: SAMN05443428_1048
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: SAMN05443428_1049
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine--tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: SAMN05443428_10491
symbol: iscS
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.


ensembl_gene_id: SAMN05443428_10493
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: SAMN05443428_10498
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: SAMN05443428_10510
symbol: SKA82943.1
gene_biotype: protein_coding
description:
  Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: SAMN05443428_105104
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: SAMN05443428_105105
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol 3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN05443428_105107
symbol: SKA83563.1
gene_biotype: protein_coding
description:
  Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.


ensembl_gene_id: SAMN05443428_105109
symbol: SKA83570.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: SAMN05443428_105110
symbol: sepF
gene_biotype: protein_coding
description:
  Cell division inhibitor SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: SAMN05443428_105115
symbol: ileS
gene_biotype: protein_coding
description:
  Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: SAMN05443428_105116
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: SAMN05443428_105118
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: SAMN05443428_105121
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: SAMN05443428_105122
symbol: SKA83613.1
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: SAMN05443428_105123
symbol: pyrR
gene_biotype: protein_coding
description:
  Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.


ensembl_gene_id: SAMN05443428_105130
symbol: SKA83641.1
gene_biotype: protein_coding
description:
  Fur family transcriptional regulator, peroxide stress response regulator; Belongs to the Fur family.


ensembl_gene_id: SAMN05443428_105133
symbol: SKA83652.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN05443428_105134
symbol: SKA83656.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN05443428_105141
symbol: SKA83677.1
gene_biotype: protein_coding
description:
  Beta-aspartyl-dipeptidase (metallo-type); Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation. Belongs to the peptidase M38 family.


ensembl_gene_id: SAMN05443428_105153
symbol: SKA83728.1
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: SAMN05443428_105155
symbol: ftsH
gene_biotype: protein_coding
description:
  Membrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: SAMN05443428_105157
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.


ensembl_gene_id: SAMN05443428_105164
symbol: SKA83770.1
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: SAMN05443428_10528
symbol: SKA83039.1
gene_biotype: protein_coding
description:
  Type I restriction enzyme, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.


ensembl_gene_id: SAMN05443428_1054
symbol: cobT
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: SAMN05443428_10543
symbol: surE
gene_biotype: protein_coding
description:
  5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: SAMN05443428_10549
symbol: SKA83178.1
gene_biotype: protein_coding
description:
  Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.


ensembl_gene_id: SAMN05443428_10552
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: SAMN05443428_10553
symbol: speH
gene_biotype: protein_coding
description:
  Adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.


ensembl_gene_id: SAMN05443428_1056
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: SAMN05443428_10563
symbol: hypA
gene_biotype: protein_coding
description:
  Hydrogenase-3 nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.


ensembl_gene_id: SAMN05443428_10576
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: SAMN05443428_10578
symbol: ychF
gene_biotype: protein_coding
description:
  Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: SAMN05443428_10580
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA (cytosine1402-N4)-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: SAMN05443428_10583
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: SAMN05443428_10584
symbol: mraY
gene_biotype: protein_coding
description:
  Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: SAMN05443428_10586
symbol: murG
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: SAMN05443428_10591
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: SAMN05443428_10592
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: SAMN05443428_10593
symbol: SKA83482.1
gene_biotype: protein_coding
description:
  Stage II sporulation protein GA (sporulation sigma-E factor processing peptidase); Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family.


ensembl_gene_id: SAMN05443428_10594
symbol: SKA83489.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 29 subunit, SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN05443428_10595
symbol: SKA83497.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma subunit, RpsG/SigG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN05443428_10597
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: SAMN05443428_10599
symbol: SKA83524.1
gene_biotype: protein_coding
description:
  Ribonucleoside-triphosphate reductase class III activase subunit; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.


ensembl_gene_id: SAMN05443428_106100
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: SAMN05443428_106101
symbol: pyrI
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase regulatory subunit; Involved in allosteric regulation of aspartate carbamoyltransferase.


ensembl_gene_id: SAMN05443428_106102
symbol: SKA85030.1
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: SAMN05443428_106104
symbol: pyrK
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).


ensembl_gene_id: SAMN05443428_106105
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase (NAD+) catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate.


ensembl_gene_id: SAMN05443428_106106
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: SAMN05443428_106110
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: SAMN05443428_106121
symbol: glyQS
gene_biotype: protein_coding
description:
  glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: SAMN05443428_106128
symbol: SKA85196.1
gene_biotype: protein_coding
description:
  NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: SAMN05443428_106151
symbol: gltX
gene_biotype: protein_coding
description:
  Nondiscriminating glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: SAMN05443428_106155
symbol: SKA85376.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN05443428_10628
symbol: SKA84536.1
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: SAMN05443428_10634
symbol: SKA84571.1
gene_biotype: protein_coding
description:
  2',3'-cyclic-nucleotide 2'-phosphodiesterase/5'-or 3'-nucleotidase, 5'-nucleotidase family; Belongs to the 5'-nucleotidase family.


ensembl_gene_id: SAMN05443428_10659
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: SAMN05443428_10660
symbol: SKA84739.1
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: SAMN05443428_10668
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: SAMN05443428_10686
symbol: hisZ
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: SAMN05443428_10687
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase catalytic subunit; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: SAMN05443428_10688
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: SAMN05443428_10689
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: SAMN05443428_10691
symbol: hisH
gene_biotype: protein_coding
description:
  Glutamine amidotransferase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: SAMN05443428_10692
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.


ensembl_gene_id: SAMN05443428_10693
symbol: hisF
gene_biotype: protein_coding
description:
  Cyclase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: SAMN05443428_1071
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: SAMN05443428_107113
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: SAMN05443428_107114
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: SAMN05443428_107115
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: SAMN05443428_107116
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: SAMN05443428_107117
symbol: hfq
gene_biotype: protein_coding
description:
  RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: SAMN05443428_107119
symbol: lexA
gene_biotype: protein_coding
description:
  Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: SAMN05443428_107124
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: SAMN05443428_107136
symbol: recA
gene_biotype: protein_coding
description:
  Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: SAMN05443428_107137
symbol: SKA86776.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN05443428_107138
symbol: rimO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: SAMN05443428_107143
symbol: dut
gene_biotype: protein_coding
description:
  dUTP pyrophosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: SAMN05443428_107145
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: SAMN05443428_107146
symbol: rpsO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: SAMN05443428_107148
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: SAMN05443428_107150
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: SAMN05443428_107151
symbol: infB
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: SAMN05443428_107155
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: SAMN05443428_107156
symbol: polC
gene_biotype: protein_coding
description:
  DNA polymerase III catalytic subunit, PolC type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN05443428_107158
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: SAMN05443428_107160
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: SAMN05443428_107163
symbol: SKA87047.1
gene_biotype: protein_coding
description:
  Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: SAMN05443428_107165
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: SAMN05443428_107167
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: SAMN05443428_10718
symbol: ybeY
gene_biotype: protein_coding
description:
  Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: SAMN05443428_1072
symbol: SKA85819.1
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen-3 oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: SAMN05443428_10720
symbol: SKA85957.1
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN05443428_10721
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: SAMN05443428_10728
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: SAMN05443428_10729
symbol: sigA
gene_biotype: protein_coding
description:
  RNA polymerase primary sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: SAMN05443428_1073
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: SAMN05443428_10730
symbol: SKA86043.1
gene_biotype: protein_coding
description:
  Haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.


ensembl_gene_id: SAMN05443428_10732
symbol: SKA86059.1
gene_biotype: protein_coding
description:
  Dinuclear metal center protein, YbgI/SA1388 family; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.


ensembl_gene_id: SAMN05443428_10738
symbol: cheD
gene_biotype: protein_coding
description:
  Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: SAMN05443428_10739
symbol: cheB
gene_biotype: protein_coding
description:
  Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: SAMN05443428_1074
symbol: grpE
gene_biotype: protein_coding
description:
  Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...]


ensembl_gene_id: SAMN05443428_10751
symbol: fliW
gene_biotype: protein_coding
description:
  Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.


ensembl_gene_id: SAMN05443428_10752
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: SAMN05443428_10753
symbol: SKA86176.1
gene_biotype: protein_coding
description:
  Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: SAMN05443428_10755
symbol: SKA86198.1
gene_biotype: protein_coding
description:
  Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: SAMN05443428_1076
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: SAMN05443428_1077
symbol: prmA
gene_biotype: protein_coding
description:
  [LSU ribosomal protein L11P]-lysine N-methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: SAMN05443428_10770
symbol: SKA86312.1
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: SAMN05443428_10773
symbol: SKA86334.1
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: SAMN05443428_1078
symbol: SKA85864.1
gene_biotype: protein_coding
description:
  16S rRNA (uracil1498-N3)-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: SAMN05443428_10785
symbol: SKA86433.1
gene_biotype: protein_coding
description:
  Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: SAMN05443428_10787
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: SAMN05443428_10788
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: SAMN05443428_10789
symbol: SKA86459.1
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliR/FlhB; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: SAMN05443428_10790
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: SAMN05443428_10794
symbol: SKA86498.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 28 subunit, SigD/FliA/WhiG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN05443428_108100
symbol: argD
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase apoenzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: SAMN05443428_108101
symbol: argB
gene_biotype: protein_coding
description:
  N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: SAMN05443428_108102
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: SAMN05443428_108103
symbol: argJ
gene_biotype: protein_coding
description:
  Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: SAMN05443428_108108
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division transport system ATP-binding protein; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: SAMN05443428_108109
symbol: SKA88067.1
gene_biotype: protein_coding
description:
  Cell division transport system permease protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: SAMN05443428_108114
symbol: SKA88085.1
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: SAMN05443428_108122
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: SAMN05443428_108123
symbol: gcvPA
gene_biotype: protein_coding
description:
  Glycine dehydrogenase (decarboxylating) alpha subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: SAMN05443428_108124
symbol: gcvPB
gene_biotype: protein_coding
description:
  Glycine dehydrogenase subunit 2; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily.


ensembl_gene_id: SAMN05443428_10819
symbol: SKA87551.1
gene_biotype: protein_coding
description:
  T/G mismatch-specific endonuclease; May nick specific sequences that contain T:G mispairs resulting from m5C-deamination.


ensembl_gene_id: SAMN05443428_10859
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: SAMN05443428_10867
symbol: SKA87857.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: SAMN05443428_10870
symbol: ubiX
gene_biotype: protein_coding
description:
  4-hydroxy-3-polyprenylbenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: SAMN05443428_10879
symbol: SKA87921.1
gene_biotype: protein_coding
description:
  PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family.


ensembl_gene_id: SAMN05443428_10882
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: SAMN05443428_10886
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-[acyl-carrier-protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: SAMN05443428_10887
symbol: nnrE
gene_biotype: protein_coding
description:
  NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of bot [...]


ensembl_gene_id: SAMN05443428_10889
symbol: SKA87965.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: SAMN05443428_10910
symbol: SKA88618.1
gene_biotype: protein_coding
description:
  N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; Belongs to the glycosyltransferase 26 family.


ensembl_gene_id: SAMN05443428_109100
symbol: SKA89260.1
gene_biotype: protein_coding
description:
  Dihydrofolate synthase / folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: SAMN05443428_109101
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: SAMN05443428_109117
symbol: clpB
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: SAMN05443428_10914
symbol: SKA88635.1
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: SAMN05443428_10933
symbol: SKA88780.1
gene_biotype: protein_coding
description:
  Indolepyruvate ferredoxin oxidoreductase alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.


ensembl_gene_id: SAMN05443428_10945
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: SAMN05443428_10951
symbol: SKA88945.1
gene_biotype: protein_coding
description:
  FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase.


ensembl_gene_id: SAMN05443428_10954
symbol: mutS2
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: SAMN05443428_10961
symbol: SKA89019.1
gene_biotype: protein_coding
description:
  Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: SAMN05443428_10962
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: SAMN05443428_10963
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: SAMN05443428_10965
symbol: SKA89040.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN05443428_10968
symbol: rplT
gene_biotype: protein_coding
description:
  LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: SAMN05443428_10970
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: SAMN05443428_10972
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: SAMN05443428_10983
symbol: hslO
gene_biotype: protein_coding
description:
  Molecular chaperone Hsp33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: SAMN05443428_10987
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: SAMN05443428_10989
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: SAMN05443428_10994
symbol: dapH
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate.


ensembl_gene_id: SAMN05443428_110101
symbol: SKA90651.1
gene_biotype: protein_coding
description:
  Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: SAMN05443428_110106
symbol: SKA90691.1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridine1911/1915/1917 synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: SAMN05443428_110114
symbol: atpE
gene_biotype: protein_coding
description:
  V/A-type H+-transporting ATPase subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: SAMN05443428_110116
symbol: atpF
gene_biotype: protein_coding
description:
  V/A-type H+-transporting ATPase subunit F; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: SAMN05443428_110117
symbol: atpA
gene_biotype: protein_coding
description:
  V/A-type H+-transporting ATPase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: SAMN05443428_110118
symbol: atpB
gene_biotype: protein_coding
description:
  V/A-type H+-transporting ATPase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.


ensembl_gene_id: SAMN05443428_110119
symbol: atpD
gene_biotype: protein_coding
description:
  V/A-type H+-transporting ATPase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: SAMN05443428_110121
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: SAMN05443428_11014
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: SAMN05443428_11015
symbol: SKA90028.1
gene_biotype: protein_coding
description:
  XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: SAMN05443428_11036
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: SAMN05443428_11037
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: SAMN05443428_11038
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: SAMN05443428_1104
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: SAMN05443428_11040
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent proteinase. Serine peptidase. MEROPS family S16; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: SAMN05443428_11041
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: SAMN05443428_11058
symbol: glmS-2
gene_biotype: protein_coding
description:
  Glutamate mutase subunit S; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).


ensembl_gene_id: SAMN05443428_11060
symbol: glmE
gene_biotype: protein_coding
description:
  Glutamate mutase subunit E; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).


ensembl_gene_id: SAMN05443428_11067
symbol: SKA90338.1
gene_biotype: protein_coding
description:
  Citrate lyase subunit gamma (acyl carrier protein); Covalent carrier of the coenzyme of citrate lyase.


ensembl_gene_id: SAMN05443428_11070
symbol: SKA90377.1
gene_biotype: protein_coding
description:
  [citrate (pro-3S)-lyase] ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.


ensembl_gene_id: SAMN05443428_11072
symbol: SKA90415.1
gene_biotype: protein_coding
description:
  triphosphoribosyl-dephospho-CoA synthase/holo-ACP synthase / triphosphoribosyl-dephospho-CoA synthase.


ensembl_gene_id: SAMN05443428_11094
symbol: SKA90595.1
gene_biotype: protein_coding
description:
  Maltodextrin-binding protein; Arabinogalactan oligomer / maltooligosaccharide transport system substrate-binding protein/arabinogalactan oligomer / maltooligosaccharide transport system permease protein.


ensembl_gene_id: SAMN05443428_111100
symbol: purN
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: SAMN05443428_11119
symbol: iolE
gene_biotype: protein_coding
description:
  2-keto-myo-inositol dehydratase; Catalyzes the dehydration of inosose (2-keto-myo-inositol, 2KMI or 2,4,6/3,5-pentahydroxycyclohexanone) to 3D-(3,5/4)- trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi-inositol).


ensembl_gene_id: SAMN05443428_11123
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: SAMN05443428_11131
symbol: tsaD
gene_biotype: protein_coding
description:
  O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: SAMN05443428_11139
symbol: rex
gene_biotype: protein_coding
description:
  Redox-sensing transcriptional repressor; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: SAMN05443428_11146
symbol: groS
gene_biotype: protein_coding
description:
  Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: SAMN05443428_11147
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: SAMN05443428_11151
symbol: larC
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family.


ensembl_gene_id: SAMN05443428_11153
symbol: guaB
gene_biotype: protein_coding
description:
  IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: SAMN05443428_1118
symbol: SKA91162.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: SAMN05443428_11196
symbol: purE
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: SAMN05443428_11198
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: SAMN05443428_11211
symbol: SKA92152.1
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: SAMN05443428_11212
symbol: rplS
gene_biotype: protein_coding
description:
  LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: SAMN05443428_11213
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine37-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: SAMN05443428_11214
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: SAMN05443428_11217
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: SAMN05443428_11218
symbol: SKA92195.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.


ensembl_gene_id: SAMN05443428_11219
symbol: ftsY
gene_biotype: protein_coding
description:
  Fused signal recognition particle receptor; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: SAMN05443428_1122
symbol: codY
gene_biotype: protein_coding
description:
  Transcriptional pleiotropic repressor; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family.


ensembl_gene_id: SAMN05443428_11220
symbol: smc
gene_biotype: protein_coding
description:
  Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: SAMN05443428_11223
symbol: rnc
gene_biotype: protein_coding
description:
  RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: SAMN05443428_11224
symbol: SKA92234.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: SAMN05443428_11226
symbol: SKA92240.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN05443428_11229
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: SAMN05443428_1123
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent HslUV protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: SAMN05443428_11230
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate:acyl-[acyl carrier protein] acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: SAMN05443428_11234
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: SAMN05443428_11236
symbol: tmcAL
gene_biotype: protein_coding
description:
  Predicted nucleotidyltransferase; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.


ensembl_gene_id: SAMN05443428_11239
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: SAMN05443428_1124
symbol: hslV
gene_biotype: protein_coding
description:
  ATP-dependent HslUV protease, peptidase subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: SAMN05443428_11241
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN05443428_11249
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: SAMN05443428_1125
symbol: trmFO
gene_biotype: protein_coding
description:
  methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: SAMN05443428_11252
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: SAMN05443428_11253
symbol: SKA92395.1
gene_biotype: protein_coding
description:
  NusB antitermination factor; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: SAMN05443428_11255
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: SAMN05443428_11257
symbol: priA
gene_biotype: protein_coding
description:
  Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: SAMN05443428_11258
symbol: SKA92436.1
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: SAMN05443428_11259
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: SAMN05443428_1126
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: SAMN05443428_11265
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: SAMN05443428_11266
symbol: SKA92489.1
gene_biotype: protein_coding
description:
  Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains.


ensembl_gene_id: SAMN05443428_11315
symbol: hypA-2
gene_biotype: protein_coding
description:
  Hydrogenase nickel incorporation protein HypA/HybF; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.


ensembl_gene_id: SAMN05443428_11350
symbol: SKA93103.1
gene_biotype: protein_coding
description:
  Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: SAMN05443428_11358
symbol: zupT
gene_biotype: protein_coding
description:
  Zinc transporter, ZIP family; Mediates zinc uptake. May also transport other divalent cations; Belongs to the ZIP transporter (TC 2.A.5) family. ZupT subfamily.


ensembl_gene_id: SAMN05443428_11362
symbol: galK
gene_biotype: protein_coding
description:
  Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.


ensembl_gene_id: SAMN05443428_11420
symbol: SKA93471.1
gene_biotype: protein_coding
description:
  tRNA (cytidine/uridine-2'-O-)-methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: SAMN05443428_11439
symbol: SKA93578.1
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN05443428_11441
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: SAMN05443428_11442
symbol: gpmI
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: SAMN05443428_11443
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: SAMN05443428_11444
symbol: SKA93607.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: SAMN05443428_11459
symbol: rnr
gene_biotype: protein_coding
description:
  RNAse R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: SAMN05443428_1146
symbol: SKA93411.1
gene_biotype: protein_coding
description:
  Glycine C-acetyltransferase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.


ensembl_gene_id: SAMN05443428_11460
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: SAMN05443428_1147
symbol: nth
gene_biotype: protein_coding
description:
  DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: SAMN05443428_11520
symbol: SKA93934.1
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase AhpD family core domain-containing protein; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: SAMN05443428_11525
symbol: pcp
gene_biotype: protein_coding
description:
  Pyroglutamyl-peptidase; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family.


ensembl_gene_id: SAMN05443428_11532
symbol: rplY
gene_biotype: protein_coding
description:
  LSU ribosomal protein L25P; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: SAMN05443428_11555
symbol: SKA94104.1
gene_biotype: protein_coding
description:
  PTS system D-mannitol-specific IIB component, Fru family /PTS system D-mannitol-specific IIC component, Fru family.


ensembl_gene_id: SAMN05443428_11620
symbol: SKA94509.1
gene_biotype: protein_coding
description:
  Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: SAMN05443428_11626
symbol: minC
gene_biotype: protein_coding
description:
  Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: SAMN05443428_11628
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: SAMN05443428_11635
symbol: rplU
gene_biotype: protein_coding
description:
  LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: SAMN05443428_11637
symbol: obg
gene_biotype: protein_coding
description:
  GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: SAMN05443428_11639
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: SAMN05443428_11642
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: SAMN05443428_11646
symbol: SKA94698.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.


ensembl_gene_id: SAMN05443428_11649
symbol: selA
gene_biotype: protein_coding
description:
  L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.


ensembl_gene_id: SAMN05443428_11653
symbol: rnfC
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.


ensembl_gene_id: SAMN05443428_11654
symbol: rnfD
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: SAMN05443428_11655
symbol: rnfG
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.


ensembl_gene_id: SAMN05443428_11656
symbol: rnfE
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfE; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: SAMN05443428_11657
symbol: rnfA
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: SAMN05443428_11658
symbol: rnfB
gene_biotype: protein_coding
description:
  Electron transport complex, RnfABCDGE type, B subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.


ensembl_gene_id: SAMN05443428_11666
symbol: gpr
gene_biotype: protein_coding
description:
  Spore protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.


ensembl_gene_id: SAMN05443428_11711
symbol: aroD
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family.


ensembl_gene_id: SAMN05443428_11717
symbol: SKA95016.1
gene_biotype: protein_coding
description:
  Molybdopterin molybdochelatase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN05443428_11719
symbol: moaA
gene_biotype: protein_coding
description:
  Cyclic pyranopterin monophosphate synthase subunit MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: SAMN05443428_11720
symbol: moaC
gene_biotype: protein_coding
description:
  Cyclic pyranopterin monophosphate synthase subunit MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: SAMN05443428_11739
symbol: SKA95142.1
gene_biotype: protein_coding
description:
  Beta-fructofuranosidase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.


ensembl_gene_id: SAMN05443428_1175
symbol: SKA94964.1
gene_biotype: protein_coding
description:
  Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family; Belongs to the LDH2/MDH2 oxidoreductase family.


ensembl_gene_id: SAMN05443428_11752
symbol: murQ
gene_biotype: protein_coding
description:
  N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.


ensembl_gene_id: SAMN05443428_1178
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05443428_1179
symbol: SKA94979.1
gene_biotype: protein_coding
description:
  Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SAMN05443428_11822
symbol: glmU
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: SAMN05443428_11823
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: SAMN05443428_11827
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase, PTH1 family; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: SAMN05443428_11828
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN05443428_11835
symbol: SKA95431.1
gene_biotype: protein_coding
description:
  DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: SAMN05443428_11845
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: SAMN05443428_1189
symbol: SKA95336.1
gene_biotype: protein_coding
description:
  Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.


ensembl_gene_id: SAMN05443428_11922
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).


ensembl_gene_id: SAMN05443428_11928
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: SAMN05443428_1195
symbol: SKA95651.1
gene_biotype: protein_coding
description:
  Na+-dependent transporter, SNF family; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.


ensembl_gene_id: SAMN05443428_12010
symbol: gltX-2
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase /glutamate--tRNA(Gln) ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: SAMN05443428_12011
symbol: SKA96046.1
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). Belongs to the class-II aminoacyl-tRNA synthetase family. ProS type 1 subfamily.


ensembl_gene_id: SAMN05443428_12014
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: SAMN05443428_12015
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: SAMN05443428_12019
symbol: disA
gene_biotype: protein_coding
description:
  Diadenylate cyclase; Has also diadenylate cyclase activity, catalyzing the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP). c-di-AMP acts as a signaling molecule that couples DNA integrity with progression of sporulation. The rise in c-di-AMP level generated by DisA while scanning the chromosome, operates as a positive signal that advances sporulation; upon encountering a lesion, the DisA focus arrests at the damaged site and halts c-di-AMP synthesis.


ensembl_gene_id: SAMN05443428_12020
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA/Sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: SAMN05443428_12025
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyl transferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: SAMN05443428_12026
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: SAMN05443428_12027
symbol: SKA96139.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: SAMN05443428_12028
symbol: SKA96143.1
gene_biotype: protein_coding
description:
  Biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: SAMN05443428_12035
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: SAMN05443428_12037
symbol: SKA96197.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter membrane protein 1, PhoT family; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: SAMN05443428_12041
symbol: SKA96224.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase class II; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: SAMN05443428_12043
symbol: SKA96237.1
gene_biotype: protein_coding
description:
  Putrescine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05443428_1205
symbol: SKA96011.1
gene_biotype: protein_coding
description:
  23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN05443428_1206
symbol: thyX
gene_biotype: protein_coding
description:
  Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: SAMN05443428_1207
symbol: mrnC
gene_biotype: protein_coding
description:
  Ribonuclease-3 family protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.


ensembl_gene_id: SAMN05443428_12128
symbol: SKA96492.1
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-glucosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: SAMN05443428_12129
symbol: SKA96495.1
gene_biotype: protein_coding
description:
  NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.


ensembl_gene_id: SAMN05443428_12212
symbol: SKA96681.1
gene_biotype: protein_coding
description:
  methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: SAMN05443428_12217
symbol: pepT
gene_biotype: protein_coding
description:
  Tripeptide aminopeptidase; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.


ensembl_gene_id: SAMN05443428_12226
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN05443428_12233
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN05443428_12234
symbol: SKA96752.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: SAMN05443428_12235
symbol: recR
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: SAMN05443428_12245
symbol: SKA96788.1
gene_biotype: protein_coding
description:
  D-alanyl-lipoteichoic acid acyltransferase DltB, MBOAT superfamily; Belongs to the membrane-bound acyltransferase family.


ensembl_gene_id: SAMN05443428_12248
symbol: crcB
gene_biotype: protein_coding
description:
  Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: SAMN05443428_12249
symbol: crcB-2
gene_biotype: protein_coding
description:
  CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: SAMN05443428_12325
symbol: rlmH
gene_biotype: protein_coding
description:
  23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: SAMN05443428_12339
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: SAMN05443428_1238
symbol: sstT
gene_biotype: protein_coding
description:
  Serine/threonine transporter; Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system). Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: SAMN05443428_12510
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: SAMN05443428_12511
symbol: SKA97445.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: SAMN05443428_12514
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase trmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: SAMN05443428_12515
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: SAMN05443428_12516
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: SAMN05443428_1252
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN05443428_1253
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN05443428_12533
symbol: rpsR
gene_biotype: protein_coding
description:
  SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: SAMN05443428_12536
symbol: SKA97519.1
gene_biotype: protein_coding
description:
  c-di-AMP phosphodiesterase, consists of a GGDEF-like and DHH domains; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.


ensembl_gene_id: SAMN05443428_12539
symbol: SKA97528.1
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: SAMN05443428_1255
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: SAMN05443428_1257
symbol: SKA97435.1
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...]


ensembl_gene_id: SAMN05443428_1258
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: SAMN05443428_12610
symbol: SKA97694.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.


ensembl_gene_id: SAMN05443428_12623
symbol: ade
gene_biotype: protein_coding
description:
  Adenine deaminase; Belongs to the metallo-dependent hydrolases superfamily. Adenine deaminase family.


ensembl_gene_id: SAMN05443428_12625
symbol: SKA97780.1
gene_biotype: protein_coding
description:
  L-threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.


ensembl_gene_id: SAMN05443428_1263
symbol: SKA97657.1
gene_biotype: protein_coding
description:
  Molybdate transport system ATP-binding protein/molybdate transport system permease protein; Belongs to the ABC transporter superfamily.


ensembl_gene_id: SAMN05443428_1264
symbol: SKA97666.1
gene_biotype: protein_coding
description:
  Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: SAMN05443428_1266
symbol: SKA97674.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor synthesis domain-containing protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN05443428_1275
symbol: SKA97968.1
gene_biotype: protein_coding
description:
  LysR substrate binding domain-containing protein; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: SAMN05443428_12810
symbol: SKA98266.1
gene_biotype: protein_coding
description:
  Glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN05443428_12817
symbol: SKA98297.1
gene_biotype: protein_coding
description:
  Site-specific DNA-methyltransferase (adenine-specific); Belongs to the N(4)/N(6)-methyltransferase family.


ensembl_gene_id: SAMN05443428_1284
symbol: psuG
gene_biotype: protein_coding
description:
  Pseudouridine-5'-phosphate glycosidase; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family.


ensembl_gene_id: SAMN05443428_12910
symbol: SKA98457.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, cofD-related; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.


ensembl_gene_id: SAMN05443428_12917
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: SAMN05443428_1292
symbol: SKA98420.1
gene_biotype: protein_coding
description:
  23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: SAMN05443428_12922
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: SAMN05443428_12923
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: SAMN05443428_1295
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: SAMN05443428_13117
symbol: SKA98777.1
gene_biotype: protein_coding
description:
  Putative multiple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN05443428_1316
symbol: SKA98743.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate--protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: SAMN05443428_1327
symbol: SKA98865.1
gene_biotype: protein_coding
description:
  Acetaldehyde dehydrogenase /alcohol dehydrogenase AdhE; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.


ensembl_gene_id: SAMN05443428_1337
symbol: SKA98987.1
gene_biotype: protein_coding
description:
  Membrane fusion protein, macrolide-specific efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN05443428_13410
symbol: rpsK
gene_biotype: protein_coding
description:
  SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: SAMN05443428_13411
symbol: rpsM
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: SAMN05443428_13413
symbol: infA
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 1 (bIF-1); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: SAMN05443428_13415
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: SAMN05443428_13416
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: SAMN05443428_13417
symbol: secY
gene_biotype: protein_coding
description:
  Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: SAMN05443428_13418
symbol: rplO
gene_biotype: protein_coding
description:
  LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: SAMN05443428_1342
symbol: rplM
gene_biotype: protein_coding
description:
  LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: SAMN05443428_13420
symbol: rpsE
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: SAMN05443428_13421
symbol: rplR
gene_biotype: protein_coding
description:
  LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: SAMN05443428_13422
symbol: rplF
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: SAMN05443428_13423
symbol: rpsH
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: SAMN05443428_13424
symbol: rpsZ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: SAMN05443428_13425
symbol: rplE
gene_biotype: protein_coding
description:
  LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: SAMN05443428_13426
symbol: rplX
gene_biotype: protein_coding
description:
  LSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: SAMN05443428_13427
symbol: rplN
gene_biotype: protein_coding
description:
  LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: SAMN05443428_13428
symbol: rpsQ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: SAMN05443428_1343
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: SAMN05443428_13430
symbol: rplP
gene_biotype: protein_coding
description:
  LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: SAMN05443428_13431
symbol: rpsC
gene_biotype: protein_coding
description:
  SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: SAMN05443428_13432
symbol: rplV
gene_biotype: protein_coding
description:
  LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: SAMN05443428_13433
symbol: rpsS
gene_biotype: protein_coding
description:
  SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: SAMN05443428_13434
symbol: rplB
gene_biotype: protein_coding
description:
  LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: SAMN05443428_13435
symbol: rplW
gene_biotype: protein_coding
description:
  LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: SAMN05443428_13437
symbol: rplC
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: SAMN05443428_13438
symbol: rpsJ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: SAMN05443428_1344
symbol: ecfT
gene_biotype: protein_coding
description:
  Energy-coupling factor transport system permease protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: SAMN05443428_1345
symbol: ecfA
gene_biotype: protein_coding
description:
  Energy-coupling factor transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: SAMN05443428_1348
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN05443428_1349
symbol: rpsD
gene_biotype: protein_coding
description:
  SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: SAMN05443428_13712
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.


ensembl_gene_id: SAMN05443428_1391
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: SAMN05443428_1394
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.


ensembl_gene_id: SAMN05443428_1395
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: SAMN05443428_14010
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN05443428_14012
symbol: rpsL
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: SAMN05443428_14013
symbol: rpsG
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: SAMN05443428_14014
symbol: fusA
gene_biotype: protein_coding
description:
  Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...]


ensembl_gene_id: SAMN05443428_1403
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: SAMN05443428_1404
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: SAMN05443428_1405
symbol: rplK
gene_biotype: protein_coding
description:
  LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: SAMN05443428_1406
symbol: rplA
gene_biotype: protein_coding
description:
  LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: SAMN05443428_1408
symbol: rplJ
gene_biotype: protein_coding
description:
  LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: SAMN05443428_1409
symbol: rplL
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: SAMN05443428_14111
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: SAMN05443428_14211
symbol: queE
gene_biotype: protein_coding
description:
  Organic radical activating enzyme; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: SAMN05443428_14214
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: SAMN05443428_1429
symbol: SKB00247.1
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: SAMN05443428_1434
symbol: pdxS
gene_biotype: protein_coding
description:
  Pyridoxal phosphate synthase yaaD subunit; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.


ensembl_gene_id: SAMN05443428_1435
symbol: pdxT
gene_biotype: protein_coding
description:
  5'-phosphate synthase pdxT subunit; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.


ensembl_gene_id: SAMN05443428_1453
symbol: SKB00573.1
gene_biotype: protein_coding
description:
  BirA family transcriptional regulator, biotin operon repressor / biotin-[acetyl-CoA-carboxylase] ligase.


ensembl_gene_id: SAMN05443428_1455
symbol: coaX
gene_biotype: protein_coding
description:
  Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: SAMN05443428_1456
symbol: SKB00586.1
gene_biotype: protein_coding
description:
  tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: SAMN05443428_14711
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: SAMN05443428_14712
symbol: SKB00723.1
gene_biotype: protein_coding
description:
  neurotransmitter:Na+ symporter, NSS family; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.


ensembl_gene_id: SAMN05443428_1526
symbol: hprK
gene_biotype: protein_coding
description:
  Hpr(Ser) kinase/phosphatase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable car [...]


# pathwayInfo

id: CL:100
description: Mixed, incl. Large ribosomal subunit, and Ribosomal protein L2, domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:100_Mixed,_incl._Large_ribosomal_subunit,_and_Ribosomal_protein_L2,_domain_2


id: CL:1017
description: Reproductive process, and rRNA (cytosine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1017_Reproductive_process,_and_rRNA_(cytosine)_methyltransferase_activity


id: CL:1043
description: Mixed, incl. DNA polymerase alpha chain like domain, and Thioesterase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1043_Mixed,_incl._DNA_polymerase_alpha_chain_like_domain,_and_Thioesterase_domain


id: CL:1044
description: Mixed, incl. Cell cycle protein, and Penicillin-binding protein, transpeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1044_Mixed,_incl._Cell_cycle_protein,_and_Penicillin-binding_protein,_transpeptidase


id: CL:1053
description: Mixed, incl. Thioesterase domain, and Homing endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1053_Mixed,_incl._Thioesterase_domain,_and_Homing_endonuclease


id: CL:1062
description: Mixed, incl. Regulation of cell cycle, and Regulation of cell shape
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1062_Mixed,_incl._Regulation_of_cell_cycle,_and_Regulation_of_cell_shape


id: CL:1064
description: Mixed, incl. Regulation of cell cycle, and Regulation of cell shape
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1064_Mixed,_incl._Regulation_of_cell_cycle,_and_Regulation_of_cell_shape


id: CL:1066
description: Mixed, incl. Actin, and Penicillin-binding Protein dimerisation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1066_Mixed,_incl._Actin,_and_Penicillin-binding_Protein_dimerisation_domain


id: CL:1096
description: Mixed, incl. Aromatic amino acid family biosynthetic process, and RNA-binding S4 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1096_Mixed,_incl._Aromatic_amino_acid_family_biosynthetic_process,_and_RNA-binding_S4_domain


id: CL:1098
description: Mixed, incl. Identical protein binding, and Lysozyme-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1098_Mixed,_incl._Identical_protein_binding,_and_Lysozyme-like_domain_superfamily


id: CL:1118
description: Chorismate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1118_Chorismate_biosynthetic_process


id: CL:1131
description: Mixed, incl. PDZ domain 6, and Domain of unknown function DUF2179
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1131_Mixed,_incl._PDZ_domain_6,_and_Domain_of_unknown_function_DUF2179


id: CL:1133
description: PDZ domain 6, and Peptidase M23
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1133_PDZ_domain_6,_and_Peptidase_M23


id: CL:1155
description: Mixed, incl. Vitamin biosynthetic process, and Pyridine nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1155_Mixed,_incl._Vitamin_biosynthetic_process,_and_Pyridine_nucleotide_biosynthetic_process


id: CL:1156
description: Vitamin biosynthetic process, and Pteridine-containing compound biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1156_Vitamin_biosynthetic_process,_and_Pteridine-containing_compound_biosynthetic_process


id: CL:1157
description: Vitamin biosynthetic process, and GTP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1157_Vitamin_biosynthetic_process,_and_GTP_binding_domain


id: CL:1158
description: Riboflavin metabolic process, and Thiamine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1158_Riboflavin_metabolic_process,_and_Thiamine_biosynthetic_process


id: CL:1170
description: Thiamine biosynthetic process, and Iron ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1170_Thiamine_biosynthetic_process,_and_Iron_ion_transport


id: CL:1181
description: Mixed, incl. Biotin metabolic process, and Menaquinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1181_Mixed,_incl._Biotin_metabolic_process,_and_Menaquinone_metabolic_process


id: CL:1195
description: Pteridine-containing compound biosynthetic process, and 6-pyruvoyl tetrahydropterin synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1195_Pteridine-containing_compound_biosynthetic_process,_and_6-pyruvoyl_tetrahydropterin_synthase


id: CL:1207
description: Mixed, incl. Pyridine nucleotide biosynthetic process, and Pantothenate biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1207_Mixed,_incl._Pyridine_nucleotide_biosynthetic_process,_and_Pantothenate_biosynthesis


id: CL:1209
description: Pyridine nucleotide biosynthetic process, and RNA capping
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1209_Pyridine_nucleotide_biosynthetic_process,_and_RNA_capping


id: CL:1211
description: Pyridine nucleotide biosynthetic process, and NUDIX hydrolase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1211_Pyridine_nucleotide_biosynthetic_process,_and_NUDIX_hydrolase,_conserved_site


id: CL:1225
description: NAD biosynthetic process, and RNA capping
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1225_NAD_biosynthetic_process,_and_RNA_capping


id: CL:1237
description: Mixed, incl. Pantothenate biosynthesis, and Nucleotidyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1237_Mixed,_incl._Pantothenate_biosynthesis,_and_Nucleotidyltransferase_domain


id: CL:1250
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1250_Mixed,_incl._Aromatic_amino_acid_family_metabolic_process,_and_rRNA_(adenine)_methyltransferase_activity

description:
  Mixed, incl. Aromatic amino acid family metabolic process, and rRNA (adenine) methyltransferase activity


id: CL:1252
description: Mixed, incl. rRNA (adenine) methyltransferase activity, and G5 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1252_Mixed,_incl._rRNA_(adenine)_methyltransferase_activity,_and_G5_domain


id: CL:1281
description: Oxidoreductase activity, and Pyruvate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1281_Oxidoreductase_activity,_and_Pyruvate_metabolism


id: CL:1282
description: Oxidoreductase activity, and Pyruvate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1282_Oxidoreductase_activity,_and_Pyruvate_metabolism


id: CL:1284
description: Oxidoreductase activity, and Butanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1284_Oxidoreductase_activity,_and_Butanoate_metabolism


id: CL:1285
description: Mixed, incl. Electron transport chain, and Pyruvate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1285_Mixed,_incl._Electron_transport_chain,_and_Pyruvate_metabolism


id: CL:1286
description: Mixed, incl. Electron transport chain, and Pyruvate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1286_Mixed,_incl._Electron_transport_chain,_and_Pyruvate_metabolism


id: CL:1287
description: Electron transport chain, and Pyruvate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1287_Electron_transport_chain,_and_Pyruvate_metabolism


id: CL:1288
description: Pyruvate metabolism, and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1288_Pyruvate_metabolism,_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:1289
description: Pyruvate metabolism, and Iron-type alcohol dehydrogenase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1289_Pyruvate_metabolism,_and_Iron-type_alcohol_dehydrogenase-like


id: CL:1291
description: Propanoate metabolism, and Aldehyde dehydrogenase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1291_Propanoate_metabolism,_and_Aldehyde_dehydrogenase_family


id: CL:1292
description: Butanoate metabolism, and acetyl-CoA biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1292_Butanoate_metabolism,_and_acetyl-CoA_biosynthetic_process


id: CL:1310
description: Mixed, incl. acetyl-CoA biosynthetic process, and BssD/PflA/YjjW
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1310_Mixed,_incl._acetyl-CoA_biosynthetic_process,_and_BssD/PflA/YjjW


id: CL:1324
description: Aldehyde dehydrogenase family, and Iron-type alcohol dehydrogenase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1324_Aldehyde_dehydrogenase_family,_and_Iron-type_alcohol_dehydrogenase-like


id: CL:1338
description: Citrate cycle (TCA cycle), and Malic oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1338_Citrate_cycle_(TCA_cycle),_and_Malic_oxidoreductase


id: CL:1369
description: NADH dehydrogenase (ubiquinone) activity, and Respirasome
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1369_NADH_dehydrogenase_(ubiquinone)_activity,_and_Respirasome


id: CL:1370
description: Mixed, incl. NuoE domain, and NADH dehydrogenase (ubiquinone) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1370_Mixed,_incl._NuoE_domain,_and_NADH_dehydrogenase_(ubiquinone)_activity


id: CL:1375
description: NADH dehydrogenase (ubiquinone) activity, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1375_NADH_dehydrogenase_(ubiquinone)_activity,_and_4Fe-4S_dicluster_domain


id: CL:1393
description: Iron hydrogenase, and Thioredoxin-like [2Fe-2S] ferredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1393_Iron_hydrogenase,_and_Thioredoxin-like_[2Fe-2S]_ferredoxin


id: CL:1396
description: Dihydroprymidine dehydrogenase domain II, and Iron hydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1396_Dihydroprymidine_dehydrogenase_domain_II,_and_Iron_hydrogenase


id: CL:1428
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1428_Mixed,_incl._D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD-binding_domain_conserved_site,_and_Lactate_oxidation

description:
  Mixed, incl. D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site, and Lactate oxidation


id: CL:1430
description: Glycolate oxidase complex, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1430_Glycolate_oxidase_complex,_and_Electron_transfer_flavoprotein_domain


id: CL:1446
description: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site, and Membrane raft
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1446_D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD-binding_domain_conserved_site,_and_Membrane_raft


id: CL:1458
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1458_Butyrate_metabolic_process,_and_2-oxoacid:acceptor_oxidoreductase,_gamma_subunit,_pyruvate/2-ketoisovalerate

description:
  Butyrate metabolic process, and 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate


id: CL:1480
description: Mixed, incl. FAD/NAD(P)-binding domain, and Glycine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1480_Mixed,_incl._FAD/NAD(P)-binding_domain,_and_Glycine_catabolic_process


id: CL:1481
description: FAD/NAD(P)-binding domain, and Glycine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1481_FAD/NAD(P)-binding_domain,_and_Glycine_catabolic_process


id: CL:1482
description: FAD/NAD(P)-binding domain, and Glycine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1482_FAD/NAD(P)-binding_domain,_and_Glycine_catabolic_process


id: CL:1500
description: 2-enoate reductase activity, and Thioredoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1500_2-enoate_reductase_activity,_and_Thioredoxin_domain


id: CL:1511
description: Mixed, incl. Rhodanese-like domain, and tRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1511_Mixed,_incl._Rhodanese-like_domain,_and_tRNA_pseudouridine_synthesis


id: CL:1522
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1522_Glutamate-ammonia_ligase_activity,_and_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor

description:
  Glutamate-ammonia ligase activity, and Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor


id: CL:1536
description: Fatty acid metabolism, and Fatty acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1536_Fatty_acid_metabolism,_and_Fatty_acid_biosynthetic_process


id: CL:1537
description: Fatty acid metabolism, and Phosphopantetheine
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1537_Fatty_acid_metabolism,_and_Phosphopantetheine


id: CL:1540
description: Fatty acid metabolism, and Fatty acid synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1540_Fatty_acid_metabolism,_and_Fatty_acid_synthase_activity


id: CL:1571
description: Mixed, incl. Protein lipoylation, and Biotin-binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1571_Mixed,_incl._Protein_lipoylation,_and_Biotin-binding_site


id: CL:1583
description: Mixed, incl. Cupin domain, and Prismane, alpha-bundle
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1583_Mixed,_incl._Cupin_domain,_and_Prismane,_alpha-bundle


id: CL:1592
description: Cellular amino acid biosynthetic process, and Arginine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1592_Cellular_amino_acid_biosynthetic_process,_and_Arginine_biosynthesis


id: CL:1594
description: Alpha-amino acid biosynthetic process, and Arginine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1594_Alpha-amino_acid_biosynthetic_process,_and_Arginine_biosynthesis


id: CL:1595
description: Alpha-amino acid biosynthetic process, and Arginine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1595_Alpha-amino_acid_biosynthetic_process,_and_Arginine_biosynthesis


id: CL:1596
description: Aspartate family amino acid metabolic process, and Cysteine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1596_Aspartate_family_amino_acid_metabolic_process,_and_Cysteine_metabolic_process


id: CL:1597
description: Lysine biosynthetic process, and Novobiocin biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1597_Lysine_biosynthetic_process,_and_Novobiocin_biosynthesis


id: CL:1598
description: Lysine biosynthetic process, and Threonine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1598_Lysine_biosynthetic_process,_and_Threonine_biosynthesis


id: CL:1600
description: Lysine biosynthesis, and Aminotransferases, class-I, pyridoxal-phosphate-binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1600_Lysine_biosynthesis,_and_Aminotransferases,_class-I,_pyridoxal-phosphate-binding_site


id: CL:1627
description: Novobiocin biosynthesis, and Asparagine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1627_Novobiocin_biosynthesis,_and_Asparagine_metabolic_process


id: CL:164
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:164_Structural_constituent_of_ribosome


id: CL:165
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:165_Structural_constituent_of_ribosome


id: CL:167
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:167_Structural_constituent_of_ribosome


id: CL:1670
description: Alanine metabolic process, and Shikimate / quinate 5-dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1670_Alanine_metabolic_process,_and_Shikimate_/_quinate_5-dehydrogenase


id: CL:1686
description: Histidine biosynthesis, and Flavodoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1686_Histidine_biosynthesis,_and_Flavodoxin_domain


id: CL:1726
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1726_Mixed,_incl._Molybdopterin_cofactor_metabolic_process,_and_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor

description:
  Mixed, incl. Molybdopterin cofactor metabolic process, and Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor


id: CL:1728
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1728_Mixed,_incl._Molybdopterin_cofactor_metabolic_process,_and_Aldehyde_ferredoxin_oxidoreductase,_domain_3

description:
  Mixed, incl. Molybdopterin cofactor metabolic process, and Aldehyde ferredoxin oxidoreductase, domain 3


id: CL:1730
description: Molybdenum cofactor biosynthesis, and Sulfur relay system
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1730_Molybdenum_cofactor_biosynthesis,_and_Sulfur_relay_system


id: CL:1733
description: Molybdenum cofactor biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1733_Molybdenum_cofactor_biosynthesis


id: CL:1758
description: Aldehyde ferredoxin oxidoreductase, domain 3, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1758_Aldehyde_ferredoxin_oxidoreductase,_domain_3,_and_4Fe-4S_binding_domain


id: CL:1776
description: Mixed, incl. Alkaloid catabolic process, and Hypoxanthine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1776_Mixed,_incl._Alkaloid_catabolic_process,_and_Hypoxanthine_catabolic_process


id: CL:1778
description: Alkaloid catabolic process, and MobA-like NTP transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1778_Alkaloid_catabolic_process,_and_MobA-like_NTP_transferase


id: CL:1792
description: Amidohydrolase family, and Ornithine carbamoyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1792_Amidohydrolase_family,_and_Ornithine_carbamoyltransferase_activity


id: CL:1801
description: Mixed, incl. RNA 3-end processing, and LysR, substrate-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1801_Mixed,_incl._RNA_3-end_processing,_and_LysR,_substrate-binding


id: CL:1810
description: Mixed, incl. Nickel cation binding, and Antiporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1810_Mixed,_incl._Nickel_cation_binding,_and_Antiporter_activity


id: CL:1812
description: Mixed, incl. ATPase complex, and Ferredoxin hydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1812_Mixed,_incl._ATPase_complex,_and_Ferredoxin_hydrogenase_activity


id: CL:1814
description: ATPase complex, and GTPase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1814_ATPase_complex,_and_GTPase_complex


id: CL:1836
description: Antiporter activity, and Formate dehydrogenase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1836_Antiporter_activity,_and_Formate_dehydrogenase_complex


id: CL:1860
description: Mixed, incl. CPE0013-like superfamily, and FAD dependent oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1860_Mixed,_incl._CPE0013-like_superfamily,_and_FAD_dependent_oxidoreductase


id: CL:187
description: Mixed, incl. Small ribosomal subunit, and Translation elongation factor EF1B/ribosomal protein S6
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:187_Mixed,_incl._Small_ribosomal_subunit,_and_Translation_elongation_factor_EF1B/ribosomal_protein_S6


id: CL:1880
description: Mixed, incl. Arginine and proline metabolism, and Tetrapyrrole methylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1880_Mixed,_incl._Arginine_and_proline_metabolism,_and_Tetrapyrrole_methylase


id: CL:1881
description: Mixed, incl. Polyamine biosynthesis, and Orn/Lys/Arg decarboxylase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1881_Mixed,_incl._Polyamine_biosynthesis,_and_Orn/Lys/Arg_decarboxylase,_C-terminal


id: CL:1882
description: Mixed, incl. Carbon-nitrogen hydrolase, and L-methionine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1882_Mixed,_incl._Carbon-nitrogen_hydrolase,_and_L-methionine_biosynthetic_process


id: CL:189
description: Small ribosomal subunit, and Translation elongation factor EF1B/ribosomal protein S6
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:189_Small_ribosomal_subunit,_and_Translation_elongation_factor_EF1B/ribosomal_protein_S6


id: CL:1894
description: Polyamine biosynthesis, and Orn/Lys/Arg decarboxylase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1894_Polyamine_biosynthesis,_and_Orn/Lys/Arg_decarboxylase,_C-terminal


id: CL:1904
description: Mixed, incl. Tetrapyrrole methylase, and Methyltransferase small domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1904_Mixed,_incl._Tetrapyrrole_methylase,_and_Methyltransferase_small_domain


id: CL:1913
description: Mixed, incl. Glycerol metabolic process, and Nucleoside bisphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1913_Mixed,_incl._Glycerol_metabolic_process,_and_Nucleoside_bisphosphate_biosynthetic_process


id: CL:1915
description: Mixed, incl. DegV, and DNA photolyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1915_Mixed,_incl._DegV,_and_DNA_photolyase_activity


id: CL:1917
description: DegV, and Asp23 family, cell envelope-related function
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1917_DegV,_and_Asp23_family,_cell_envelope-related_function


id: CL:1944
description: Mixed, incl. RelA/SpoT, and CoA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1944_Mixed,_incl._RelA/SpoT,_and_CoA-binding


id: CL:1954
description: Mixed, incl. Phosphate ion transport, and ATP cone domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1954_Mixed,_incl._Phosphate_ion_transport,_and_ATP_cone_domain


id: CL:1970
description: Mixed, incl. ATP cone domain, and Regulation of response to stress
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1970_Mixed,_incl._ATP_cone_domain,_and_Regulation_of_response_to_stress


id: CL:1984
description: Carbohydrate metabolic process, and Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1984_Carbohydrate_metabolic_process,_and_Phosphotransferase_system_(PTS)


id: CL:1985
description: Phosphotransferase system (PTS), and Carbohydrate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1985_Phosphotransferase_system_(PTS),_and_Carbohydrate_metabolic_process


id: CL:1987
description: Phosphotransferase system (PTS), and Carbohydrate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1987_Phosphotransferase_system_(PTS),_and_Carbohydrate_metabolic_process


id: CL:1988
description: Mixed, incl. Phosphotransferase system (PTS), and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1988_Mixed,_incl._Phosphotransferase_system_(PTS),_and_Pentose_phosphate_pathway


id: CL:1989
description: Mixed, incl. Phosphotransferase system (PTS), and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1989_Mixed,_incl._Phosphotransferase_system_(PTS),_and_Pentose_phosphate_pathway


id: CL:1990
description: Glycolysis / Gluconeogenesis, and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1990_Glycolysis_/_Gluconeogenesis,_and_Pentose_phosphate_pathway


id: CL:1991
description: Glycolysis, and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1991_Glycolysis,_and_Pentose_phosphate_pathway


id: CL:1993
description: Glycolysis, and Thiamin diphosphate-binding fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1993_Glycolysis,_and_Thiamin_diphosphate-binding_fold


id: CL:1994
description: Glycolysis, and Aldehyde-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1994_Glycolysis,_and_Aldehyde-lyase_activity


id: CL:1997
description: Glycolysis, and Fructose-bisphosphate aldolase class-II
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:1997_Glycolysis,_and_Fructose-bisphosphate_aldolase_class-II


id: CL:2029
description: Lactose metabolic process, and Dehydrogenase E1 component
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2029_Lactose_metabolic_process,_and_Dehydrogenase_E1_component


id: CL:2047
description: Amino sugar and nucleotide sugar metabolism, and Glycoside hydrolase family 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2047_Amino_sugar_and_nucleotide_sugar_metabolism,_and_Glycoside_hydrolase_family_1


id: CL:2048
description: Amino sugar and nucleotide sugar metabolism, and Glycoside hydrolase family 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2048_Amino_sugar_and_nucleotide_sugar_metabolism,_and_Glycoside_hydrolase_family_1


id: CL:2050
description: Mixed, incl. Glucose permease domain IIB, and Glycoside hydrolase family 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2050_Mixed,_incl._Glucose_permease_domain_IIB,_and_Glycoside_hydrolase_family_1


id: CL:2053
description: Glucose permease domain IIB, and Phosphotransferase system, sugar-specific permease EIIA type 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2053_Glucose_permease_domain_IIB,_and_Phosphotransferase_system,_sugar-specific_permease_EIIA_type_1


id: CL:206
description: L28p-like, and Ribosomal protein L25/Gln-tRNA synthetase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:206_L28p-like,_and_Ribosomal_protein_L25/Gln-tRNA_synthetase,_N-terminal


id: CL:2070
description: Amino sugar catabolic process, and UbiC transcription regulator-associated
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2070_Amino_sugar_catabolic_process,_and_UbiC_transcription_regulator-associated


id: CL:2079
description: Alpha-D-phosphohexomutase superfamily, and Uridylyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2079_Alpha-D-phosphohexomutase_superfamily,_and_Uridylyltransferase_activity


id: CL:2095
description: Import across plasma membrane, and Lactone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2095_Import_across_plasma_membrane,_and_Lactone_metabolic_process


id: CL:2096
description: Import across plasma membrane, and Lactose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2096_Import_across_plasma_membrane,_and_Lactose_metabolism


id: CL:2098
description: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity, and Lactose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2098_protein-N(PI)-phosphohistidine-sugar_phosphotransferase_activity,_and_Lactose_metabolism


id: CL:2100
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2100_Phosphotransferase_system,_fructose_IIC_component,_and_Protein-phosphocysteine-sugar_phosphotransferase_activity

description:
  Phosphotransferase system, fructose IIC component, and Protein-phosphocysteine-sugar phosphotransferase activity


id: CL:2118
description: PTS EIIA type-2 domain, and HPr-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2118_PTS_EIIA_type-2_domain,_and_HPr-like_superfamily


id: CL:2138
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2138_Mixed,_incl._PTS_system_sorbose-specific_iic_component,_and_PTS_system_sorbose_subfamily_IIB_component

description:
  Mixed, incl. PTS system sorbose-specific iic component, and PTS system sorbose subfamily IIB component


id: CL:2154
description: Ascorbate and aldarate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2154_Ascorbate_and_aldarate_metabolism


id: CL:2156
description: Ascorbate and aldarate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2156_Ascorbate_and_aldarate_metabolism


id: CL:2177
description: Mixed, incl. Protein glycosylation, and Ribokinase/fructokinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2177_Mixed,_incl._Protein_glycosylation,_and_Ribokinase/fructokinase


id: CL:2193
description: Mixed, incl. Inositol metabolic process, and Family 4 glycosyl hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2193_Mixed,_incl._Inositol_metabolic_process,_and_Family_4_glycosyl_hydrolase


id: CL:2194
description: Inositol metabolic process, and Family 4 glycosyl hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2194_Inositol_metabolic_process,_and_Family_4_glycosyl_hydrolase


id: CL:2215
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2215_Mixed,_incl._Glycyl_radical_enzyme,_PFL2/glycerol_dehydratase_family,_and_DeoR_C_terminal_sensor_domain

description:
  Mixed, incl. Glycyl radical enzyme, PFL2/glycerol dehydratase family, and DeoR C terminal sensor domain


id: CL:2230
description: LacI-type HTH domain, and Amine-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2230_LacI-type_HTH_domain,_and_Amine-lyase_activity


id: CL:2254
description: Mixed, incl. Pentose and glucuronate interconversions, and Glycosidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2254_Mixed,_incl._Pentose_and_glucuronate_interconversions,_and_Glycosidase


id: CL:2255
description: Mixed, incl. Glycosidase, and Monosaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2255_Mixed,_incl._Glycosidase,_and_Monosaccharide_metabolic_process


id: CL:2256
description: Mixed, incl. Glycosidase, and Galactose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2256_Mixed,_incl._Glycosidase,_and_Galactose_metabolic_process


id: CL:2258
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2258_Mixed,_incl._Galactosidase_activity,_and_Glycosyl_hydrolase,_five-bladed_beta-propellor_domain_superfamily

description:
  Mixed, incl. Galactosidase activity, and Glycosyl hydrolase, five-bladed beta-propellor domain superfamily


id: CL:2260
description: Galactosidase activity, and Family 4 glycosyl hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2260_Galactosidase_activity,_and_Family_4_glycosyl_hydrolase


id: CL:2284
description: Mixed, incl. UROD/MetE-like superfamily, and Transglutaminase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2284_Mixed,_incl._UROD/MetE-like_superfamily,_and_Transglutaminase-like_superfamily


id: CL:2293
description: Mixed, incl. Class II aldolase/adducin N-terminal, and Lactose permease-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2293_Mixed,_incl._Class_II_aldolase/adducin_N-terminal,_and_Lactose_permease-like


id: CL:2294
description: Mixed, incl. Lactose permease-like, and Glycoside hydrolase family 31
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2294_Mixed,_incl._Lactose_permease-like,_and_Glycoside_hydrolase_family_31


id: CL:2305
description: Class II aldolase/adducin N-terminal, and Aminotransferase class-III
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2305_Class_II_aldolase/adducin_N-terminal,_and_Aminotransferase_class-III


id: CL:2314
description: Mixed, incl. Uronic acid metabolic process, and TRAP transporter solute receptor DctP
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2314_Mixed,_incl._Uronic_acid_metabolic_process,_and_TRAP_transporter_solute_receptor_DctP


id: CL:2317
description: Mixed, incl. Galactose mutarotase-like, and TRAP transporter solute receptor DctP
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2317_Mixed,_incl._Galactose_mutarotase-like,_and_TRAP_transporter_solute_receptor_DctP


id: CL:2332
description: Mixed, incl. Uronic acid metabolic process, and TRAP transporter solute receptor DctP
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2332_Mixed,_incl._Uronic_acid_metabolic_process,_and_TRAP_transporter_solute_receptor_DctP


id: CL:2343
description: MetI-like superfamily, and Starch and sucrose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2343_MetI-like_superfamily,_and_Starch_and_sucrose_metabolism


id: CL:2344
description: MetI-like superfamily, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2344_MetI-like_superfamily,_and_Bacterial_extracellular_solute-binding_protein


id: CL:2346
description: MetI-like superfamily, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2346_MetI-like_superfamily,_and_Bacterial_extracellular_solute-binding_protein


id: CL:2347
description: MetI-like superfamily, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2347_MetI-like_superfamily,_and_Bacterial_extracellular_solute-binding_protein


id: CL:2349
description: MetI-like superfamily, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2349_MetI-like_superfamily,_and_Bacterial_extracellular_solute-binding_protein


id: CL:2351
description: MetI-like superfamily, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2351_MetI-like_superfamily,_and_Bacterial_extracellular_solute-binding_protein


id: CL:2353
description: ABC-type maltose transporter activity, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2353_ABC-type_maltose_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein


id: CL:2355
description: Mixed, incl. ABC-type maltose transporter activity, and Solute-binding family 1, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2355_Mixed,_incl._ABC-type_maltose_transporter_activity,_and_Solute-binding_family_1,_conserved_site


id: CL:2373
description: ABC-type maltose transporter activity, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2373_ABC-type_maltose_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein


id: CL:2421
description: Mixed, incl. Beta-galactosidase, domain 4, and Six-hairpin glycosidase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2421_Mixed,_incl._Beta-galactosidase,_domain_4,_and_Six-hairpin_glycosidase-like_superfamily


id: CL:2434
description: Mixed, incl. TPM domain, and Protein ubiquitination
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2434_Mixed,_incl._TPM_domain,_and_Protein_ubiquitination


id: CL:2449
description: Starch and sucrose metabolism, and Amino acid antiporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2449_Starch_and_sucrose_metabolism,_and_Amino_acid_antiporter


id: CL:2450
description: Starch and sucrose metabolism, and Amino acid antiporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2450_Starch_and_sucrose_metabolism,_and_Amino_acid_antiporter


id: CL:2453
description: Glycosyl hydrolase, family 13, catalytic domain, and Glycogen metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2453_Glycosyl_hydrolase,_family_13,_catalytic_domain,_and_Glycogen_metabolic_process


id: CL:2471
description: Amino acid antiporter, and Alpha-amylase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2471_Amino_acid_antiporter,_and_Alpha-amylase_domain


id: CL:2483
description: Glycoside hydrolase family 65, C-terminal, and Haloacid dehalogenase-like hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2483_Glycoside_hydrolase_family_65,_C-terminal,_and_Haloacid_dehalogenase-like_hydrolase


id: CL:2494
description: Glycosyl hydrolase 94, and Galactose mutarotase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2494_Glycosyl_hydrolase_94,_and_Galactose_mutarotase-like


id: CL:2503
description: Mixed, incl. Glycosyl hydrolase family 66, and AraC-like ligand binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2503_Mixed,_incl._Glycosyl_hydrolase_family_66,_and_AraC-like_ligand_binding_domain


id: CL:2514
description: Mostly uncharacterized, incl. Exopeptidase activity, and Cobalamin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2514_Mostly_uncharacterized,_incl._Exopeptidase_activity,_and_Cobalamin_metabolic_process


id: CL:2515
description: Mixed, incl. Peptidase M42, and Response to toxic substance
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2515_Mixed,_incl._Peptidase_M42,_and_Response_to_toxic_substance


id: CL:2516
description: Mixed, incl. Peptidase M42, and Benzoate degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2516_Mixed,_incl._Peptidase_M42,_and_Benzoate_degradation


id: CL:2517
description: Mixed, incl. Peptidase M42, and Cupin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2517_Mixed,_incl._Peptidase_M42,_and_Cupin_domain


id: CL:2519
description: Mixed, incl. Cupin domain, and Alpha/beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2519_Mixed,_incl._Cupin_domain,_and_Alpha/beta_hydrolase_fold


id: CL:2541
description: Mixed, incl. GntR, C-terminal, and LysR, substrate-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2541_Mixed,_incl._GntR,_C-terminal,_and_LysR,_substrate-binding


id: CL:2555
description: Mixed, incl. Flavoprotein-like superfamily, and Nitroreductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2555_Mixed,_incl._Flavoprotein-like_superfamily,_and_Nitroreductase-like


id: CL:2556
description: Mixed, incl. Flavoprotein-like superfamily, and Nitroreductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2556_Mixed,_incl._Flavoprotein-like_superfamily,_and_Nitroreductase-like


id: CL:2557
description: Mixed, incl. Nitroreductase-like, and NADPH-dependent FMN reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2557_Mixed,_incl._Nitroreductase-like,_and_NADPH-dependent_FMN_reductase


id: CL:256
description: Mixed, incl. GTP binding domain, and Pseudouridine synthase, RluA-like, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:256_Mixed,_incl._GTP_binding_domain,_and_Pseudouridine_synthase,_RluA-like,_conserved_site


id: CL:2570
description: Rubredoxin-like domain, and Prismane, alpha-bundle
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2570_Rubredoxin-like_domain,_and_Prismane,_alpha-bundle


id: CL:2579
description: Mixed, incl. Major Facilitator Superfamily, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2579_Mixed,_incl._Major_Facilitator_Superfamily,_and_Sulfur_metabolism


id: CL:2588
description: Mixed, incl. Cobalamin metabolic process, and Ammonia-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2588_Mixed,_incl._Cobalamin_metabolic_process,_and_Ammonia-lyase_activity


id: CL:2589
description: Mixed, incl. Cobalamin metabolic process, and Phosphoglycerate mutase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2589_Mixed,_incl._Cobalamin_metabolic_process,_and_Phosphoglycerate_mutase_family


id: CL:2592
description: Mixed, incl. AAA domain, and RutC-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2592_Mixed,_incl._AAA_domain,_and_RutC-like_superfamily


id: CL:260
description: Mixed, incl. Phosphopantetheine, and RNA helicase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:260_Mixed,_incl._Phosphopantetheine,_and_RNA_helicase_activity


id: CL:2623
description: Ammonia-lyase activity, and WLM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2623_Ammonia-lyase_activity,_and_WLM_domain


id: CL:2640
description: Mixed, incl. Secretion, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2640_Mixed,_incl._Secretion,_and_Pilus_organization


id: CL:2641
description: Mixed, incl. Protein transport across the cell outer membrane, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2641_Mixed,_incl._Protein_transport_across_the_cell_outer_membrane,_and_Pilus_organization


id: CL:2642
description: Mixed, incl. Protein transport across the cell outer membrane, and GspF/PilC family
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2642_Mixed,_incl._Protein_transport_across_the_cell_outer_membrane,_and_GspF/PilC_family


id: CL:2644
description: Mixed, incl. Type II/IV secretion system protein, and GspF/PilC family
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2644_Mixed,_incl._Type_II/IV_secretion_system_protein,_and_GspF/PilC_family


id: CL:2646
description: Type II/IV secretion system protein, and GspF/PilC family
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2646_Type_II/IV_secretion_system_protein,_and_GspF/PilC_family


id: CL:2670
description: Mixed, incl. Prokaryotic N-terminal methylation motif, and Chromosome partition
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2670_Mixed,_incl._Prokaryotic_N-terminal_methylation_motif,_and_Chromosome_partition


id: CL:2673
description: Mixed, incl. Pilus assembly, and Von Willebrand factor, type A
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2673_Mixed,_incl._Pilus_assembly,_and_Von_Willebrand_factor,_type_A


id: CL:2686
description: Mixed, incl. Chromosome partition, and AAA domain, putative AbiEii toxin, Type IV TA system
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2686_Mixed,_incl._Chromosome_partition,_and_AAA_domain,_putative_AbiEii_toxin,_Type_IV_TA_system


id: CL:2699
description: Pilus assembly, and Transmembrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2699_Pilus_assembly,_and_Transmembrane


id: CL:2713
description: Mostly uncharacterized, incl. AAA domain, and RNA capping
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2713_Mostly_uncharacterized,_incl._AAA_domain,_and_RNA_capping


id: CL:2716
description: Mixed, incl. AAA domain, and Peptidase U32
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2716_Mixed,_incl._AAA_domain,_and_Peptidase_U32


id: CL:2729
description: Mixed, incl. RNA capping, and Ferric-uptake regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2729_Mixed,_incl._RNA_capping,_and_Ferric-uptake_regulator


id: CL:2746
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2746_Mixed,_incl._Sulfur_relay_system,_and_Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond

description:
  Mixed, incl. Sulfur relay system, and Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond


id: CL:2747
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2747_Mixed,_incl._Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond,_and_Sulfur_relay_system

description:
  Mixed, incl. Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, and Sulfur relay system


id: CL:2748
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2748_Mixed,_incl._Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond,_and_Selenocompound_metabolism

description:
  Mixed, incl. Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, and Selenocompound metabolism


id: CL:2749
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2749_Mixed,_incl._Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond,_and_Glycine/sarcosine/betaine_reductase_component_B_subunits

description:
  Mixed, incl. Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, and Glycine/sarcosine/betaine reductase component B subunits


id: CL:2750
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2750_Mixed,_incl._Glycine/sarcosine/betaine_reductase_component_B_subunits,_and_Sulfite_exporter_TauE/SafE

description:
  Mixed, incl. Glycine/sarcosine/betaine reductase component B subunits, and Sulfite exporter TauE/SafE


id: CL:2753
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2753_Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond,_and_RnfC_Barrel_sandwich_hybrid_domain

description:
  Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, and RnfC Barrel sandwich hybrid domain


id: CL:2769
description: Mixed, incl. Glycine reductase activity, and Fatty acid synthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2769_Mixed,_incl._Glycine_reductase_activity,_and_Fatty_acid_synthesis_protein


id: CL:2772
description: Glycine reductase activity, and Glycine reductase complex selenoprotein A
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2772_Glycine_reductase_activity,_and_Glycine_reductase_complex_selenoprotein_A


id: CL:2789
description: Mixed, incl. DDE transposase retroviral integrase sub-family, and Sulphur transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2789_Mixed,_incl._DDE_transposase_retroviral_integrase_sub-family,_and_Sulphur_transport


id: CL:279
description: Mixed, incl. Translational readthrough, and NAD-dependent epimerase/dehydratase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:279_Mixed,_incl._Translational_readthrough,_and_NAD-dependent_epimerase/dehydratase


id: CL:2805
description: Mixed, incl. Iron-sulfur cluster assembly, and Xylose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2805_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Xylose_metabolism


id: CL:2807
description: Iron-sulfur cluster assembly, and Thiamine biosynthesis protein (ThiI)
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2807_Iron-sulfur_cluster_assembly,_and_Thiamine_biosynthesis_protein_(ThiI)


id: CL:2834
description: ABC transporter substrate-binding protein PnrA-like, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2834_ABC_transporter_substrate-binding_protein_PnrA-like,_and_ABC_transporter,_permease


id: CL:2836
description: ABC transporter substrate-binding protein PnrA-like, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2836_ABC_transporter_substrate-binding_protein_PnrA-like,_and_ABC_transporter,_permease


id: CL:2854
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2854_Mixed,_incl._Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor,_and_Phosphodiester_glycosidase

description:
  Mixed, incl. Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor, and Phosphodiester glycosidase


id: CL:2866
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2866_Mixed,_incl._Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor,_and_Response_to_arsenic-containing_substance

description:
  Mixed, incl. Helix_turn_helix, Arsenical Resistance Operon Repressor, and Response to arsenic-containing substance


id: CL:2867
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2867_Mixed,_incl._Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor,_and_Response_to_arsenic-containing_substance

description:
  Mixed, incl. Helix_turn_helix, Arsenical Resistance Operon Repressor, and Response to arsenic-containing substance


id: CL:2868
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2868_Mixed,_incl._Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor,_and_Response_to_arsenic-containing_substance

description:
  Mixed, incl. Helix_turn_helix, Arsenical Resistance Operon Repressor, and Response to arsenic-containing substance


id: CL:2869
description: Mixed, incl. Helix_turn_helix, Arsenical Resistance Operon Repressor, and Predicted permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2869_Mixed,_incl._Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor,_and_Predicted_permease


id: CL:2870
description: Mixed, incl. Helix_turn_helix, Arsenical Resistance Operon Repressor, and RelA/SpoT
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2870_Mixed,_incl._Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor,_and_RelA/SpoT


id: CL:2871
description: Helix_turn_helix, Arsenical Resistance Operon Repressor, and Predicted permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2871_Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor,_and_Predicted_permease


id: CL:2882
description: Mixed, incl. RelA/SpoT, and Anaerobic coproporphyrinogen-III oxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2882_Mixed,_incl._RelA/SpoT,_and_Anaerobic_coproporphyrinogen-III_oxidase


id: CL:289
description: SRP54-type protein, helical bundle domain, and Translocation
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:289_SRP54-type_protein,_helical_bundle_domain,_and_Translocation


id: CL:2892
description: Predicted permease, and Cytochrome complex assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2892_Predicted_permease,_and_Cytochrome_complex_assembly


id: CL:2908
description: Mixed, incl. Response to arsenic-containing substance, and Uncharacterised ArCR, COG2043
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2908_Mixed,_incl._Response_to_arsenic-containing_substance,_and_Uncharacterised_ArCR,_COG2043


id: CL:2909
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2909_Response_to_arsenic-containing_substance,_and_Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor

description:
  Response to arsenic-containing substance, and Helix_turn_helix, Arsenical Resistance Operon Repressor


id: CL:2923
description: Uncharacterised ArCR, COG2043, and AhpD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2923_Uncharacterised_ArCR,_COG2043,_and_AhpD-like


id: CL:2933
description: Mixed, incl. Heavy-metal-associated domain, and Metal-sensitive transcriptional repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2933_Mixed,_incl._Heavy-metal-associated_domain,_and_Metal-sensitive_transcriptional_repressor


id: CL:2934
description: Mixed, incl. Heavy-metal-associated domain, and Metal-sensitive transcriptional repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2934_Mixed,_incl._Heavy-metal-associated_domain,_and_Metal-sensitive_transcriptional_repressor


id: CL:2935
description: Heavy-metal-associated domain, and Metal-sensitive transcriptional repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2935_Heavy-metal-associated_domain,_and_Metal-sensitive_transcriptional_repressor


id: CL:2954
description: Mixed, incl. Cation efflux family, and Haloacid dehalogenase-like hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2954_Mixed,_incl._Cation_efflux_family,_and_Haloacid_dehalogenase-like_hydrolase


id: CL:2963
description: Arsenite transmembrane transporter activity, and Positive regulation of RNA biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2963_Arsenite_transmembrane_transporter_activity,_and_Positive_regulation_of_RNA_biosynthetic_process


id: CL:2972
description: Mixed, incl. Peptidase M29, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2972_Mixed,_incl._Peptidase_M29,_and_4Fe-4S_binding_domain


id: CL:2990
description: Mixed, incl. Cell differentiation, and Serine hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2990_Mixed,_incl._Cell_differentiation,_and_Serine_hydrolase_activity


id: CL:2991
description: Mixed, incl. Cell differentiation, and Serine hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2991_Mixed,_incl._Cell_differentiation,_and_Serine_hydrolase_activity


id: CL:2992
description: Mixed, incl. Cell differentiation, and Carboxypeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2992_Mixed,_incl._Cell_differentiation,_and_Carboxypeptidase


id: CL:2993
description: Cell differentiation, and Carboxypeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2993_Cell_differentiation,_and_Carboxypeptidase


id: CL:2994
description: Cell differentiation, and Carboxypeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2994_Cell_differentiation,_and_Carboxypeptidase


id: CL:2995
description: Cell differentiation, and Peptidase S11, D-alanyl-D-alanine carboxypeptidase A
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2995_Cell_differentiation,_and_Peptidase_S11,_D-alanyl-D-alanine_carboxypeptidase_A


id: CL:2996
description: Cell differentiation, and Peptidase S11, D-alanyl-D-alanine carboxypeptidase A
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2996_Cell_differentiation,_and_Peptidase_S11,_D-alanyl-D-alanine_carboxypeptidase_A


id: CL:2997
description: Cell differentiation, and Peptidase S11, D-alanyl-D-alanine carboxypeptidase A
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2997_Cell_differentiation,_and_Peptidase_S11,_D-alanyl-D-alanine_carboxypeptidase_A


id: CL:2999
description: Cell differentiation, and RNA polymerase sigma-B/F/G type
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:2999_Cell_differentiation,_and_RNA_polymerase_sigma-B/F/G_type


id: CL:3000
description: Cell differentiation, and RNA polymerase sigma-B/F/G type
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3000_Cell_differentiation,_and_RNA_polymerase_sigma-B/F/G_type


id: CL:3003
description: Sporulation, and RNA polymerase sigma-B/F/G type
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3003_Sporulation,_and_RNA_polymerase_sigma-B/F/G_type


id: CL:3007
description: Mixed, incl. Sporulation, and RNA polymerase sigma-70
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3007_Mixed,_incl._Sporulation,_and_RNA_polymerase_sigma-70


id: CL:3009
description: Mixed, incl. Sporulation, and SpoVT / AbrB like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3009_Mixed,_incl._Sporulation,_and_SpoVT_/_AbrB_like_domain


id: CL:3038
description: Stage III sporulation protein AC/AD family, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3038_Stage_III_sporulation_protein_AC/AD_family,_and_Sporulation


id: CL:3060
description: Mixed, incl. SpoVA, and Asexual sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3060_Mixed,_incl._SpoVA,_and_Asexual_sporulation


id: CL:307
description: tRNA aminoacylation for protein translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:307_tRNA_aminoacylation_for_protein_translation


id: CL:308
description: Aminoacyl-tRNA synthetase, class I, conserved site, and prolyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:308_Aminoacyl-tRNA_synthetase,_class_I,_conserved_site,_and_prolyl-tRNA_aminoacylation


id: CL:3080
description: Spore germination, and Cell Wall Hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3080_Spore_germination,_and_Cell_Wall_Hydrolase


id: CL:3094
description: Cell Wall Hydrolase, and Glyco_18
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3094_Cell_Wall_Hydrolase,_and_Glyco_18


id: CL:3103
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3103_Mixed,_incl._Protein_of_unknown_function_DUF1256,_and_Mycobacterial_4_TMS_phage_holin,_superfamily_IV

description:
  Mixed, incl. Protein of unknown function DUF1256, and Mycobacterial 4 TMS phage holin, superfamily IV


id: CL:312
description: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:312_Aminoacyl-tRNA_synthetase,_class_Ia,_anticodon-binding


id: CL:3121
description: Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, and Nucleoside recognition
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3121_Peptidase_S11,_D-alanyl-D-alanine_carboxypeptidase_A,_and_Nucleoside_recognition


id: CL:3132
description: Stage II sporulation protein, and Peptidase M23
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3132_Stage_II_sporulation_protein,_and_Peptidase_M23


id: CL:3141
description: Lipid degradation, and Putative amidase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3141_Lipid_degradation,_and_Putative_amidase_domain


id: CL:3151
description: Spore germination, and Membrane assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3151_Spore_germination,_and_Membrane_assembly


id: CL:3169
description: Virion, and Protein of unknown function DUF378
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3169_Virion,_and_Protein_of_unknown_function_DUF378


id: CL:3178
description: Mixed, incl. Endospore-forming forespore, and Tetrapyrrole methylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3178_Mixed,_incl._Endospore-forming_forespore,_and_Tetrapyrrole_methylase


id: CL:3180
description: Mixed, incl. Endospore-forming forespore, and Tetrapyrrole methylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3180_Mixed,_incl._Endospore-forming_forespore,_and_Tetrapyrrole_methylase


id: CL:3192
description: Mixed, incl. Methyltransferase domain, and Cellular response to heat
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3192_Mixed,_incl._Methyltransferase_domain,_and_Cellular_response_to_heat


id: CL:3202
description: Mixed, incl. Peptidase family S51, and Nucleoside triphosphate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3202_Mixed,_incl._Peptidase_family_S51,_and_Nucleoside_triphosphate_catabolic_process


id: CL:3204
description: Mixed, incl. Peptidase family S51, and Nucleoside triphosphate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3204_Mixed,_incl._Peptidase_family_S51,_and_Nucleoside_triphosphate_catabolic_process


id: CL:3229
description: Mixed, incl. Gated channel activity, and Sulphur relay, DsrE/F-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3229_Mixed,_incl._Gated_channel_activity,_and_Sulphur_relay,_DsrE/F-like


id: CL:3251
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3251_Mostly_uncharacterized,_incl._Developmental_process,_and_Cationic_antimicrobial_peptide_(CAMP)_resistance

description:
  Mostly uncharacterized, incl. Developmental process, and Cationic antimicrobial peptide (CAMP) resistance


id: CL:3252
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3252_Mostly_uncharacterized,_incl._Developmental_process,_and_Cationic_antimicrobial_peptide_(CAMP)_resistance

description:
  Mostly uncharacterized, incl. Developmental process, and Cationic antimicrobial peptide (CAMP) resistance


id: CL:3253
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3253_Mostly_uncharacterized,_incl._Developmental_process,_and_Cationic_antimicrobial_peptide_(CAMP)_resistance

description:
  Mostly uncharacterized, incl. Developmental process, and Cationic antimicrobial peptide (CAMP) resistance


id: CL:3254
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3254_Mostly_uncharacterized,_incl._Cationic_antimicrobial_peptide_(CAMP)_resistance,_and_Tetratricopeptide_repeats

description:
  Mostly uncharacterized, incl. Cationic antimicrobial peptide (CAMP) resistance, and Tetratricopeptide repeats


id: CL:3256
description: Mostly uncharacterized, incl. Flavin adenine dinucleotide binding, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3256_Mostly_uncharacterized,_incl._Flavin_adenine_dinucleotide_binding,_and_DNA_replication


id: CL:3257
description: Mostly uncharacterized, incl. tRNA (m5U54) methyltransferase activity, and Sigma-70 region 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3257_Mostly_uncharacterized,_incl._tRNA_(m5U54)_methyltransferase_activity,_and_Sigma-70_region_2


id: CL:3259
description: Mixed, incl. Sigma-70 region 2 , and Primosome complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3259_Mixed,_incl._Sigma-70_region_2_,_and_Primosome_complex


id: CL:3260
description: Mixed, incl. Sigma-70 region 2 , and MerR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3260_Mixed,_incl._Sigma-70_region_2_,_and_MerR-type_HTH_domain


id: CL:3262
description: MerR-type HTH domain, and Sigma-70 region 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3262_MerR-type_HTH_domain,_and_Sigma-70_region_2


id: CL:327
description: Class I and II aminoacyl-tRNA synthetase, tRNA-binding arm, and TGS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:327_Class_I_and_II_aminoacyl-tRNA_synthetase,_tRNA-binding_arm,_and_TGS_domain


id: CL:3281
description: Mixed, incl. DnaD domain, and DNA strand elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3281_Mixed,_incl._DnaD_domain,_and_DNA_strand_elongation


id: CL:3295
description: Mixed, incl. tRNA (m5U54) methyltransferase activity, and UBA-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3295_Mixed,_incl._tRNA_(m5U54)_methyltransferase_activity,_and_UBA-like_superfamily


id: CL:3307
description: Mostly uncharacterized, incl. Armadillo-type fold, and L,D-transpeptidase catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3307_Mostly_uncharacterized,_incl._Armadillo-type_fold,_and_L,D-transpeptidase_catalytic_domain


id: CL:3309
description: Mixed, incl. Armadillo-type fold, and Cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3309_Mixed,_incl._Armadillo-type_fold,_and_Cyclase_activity


id: CL:3338
description: Mostly uncharacterized, incl. Peptidoglycan catabolic process, and CAAX-box protein processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3338_Mostly_uncharacterized,_incl._Peptidoglycan_catabolic_process,_and_CAAX-box_protein_processing


id: CL:3340
description: Mostly uncharacterized, incl. CAAX-box protein processing, and Domain of unknown function DUF6385
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3340_Mostly_uncharacterized,_incl._CAAX-box_protein_processing,_and_Domain_of_unknown_function_DUF6385


id: CL:3342
description: Mixed, incl. CAAX-box protein processing, and Domain of unknown function DUF6385
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3342_Mixed,_incl._CAAX-box_protein_processing,_and_Domain_of_unknown_function_DUF6385


id: CL:3344
description: Mixed, incl. Membrane assembly, and Carboxypeptidase regulatory-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3344_Mixed,_incl._Membrane_assembly,_and_Carboxypeptidase_regulatory-like_domain


id: CL:3346
description: Mixed, incl. Membrane assembly, and Tetratricopeptide repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3346_Mixed,_incl._Membrane_assembly,_and_Tetratricopeptide_repeats


id: CL:3368
description: CAAX-box protein processing, and Domain of unknown function DUF6385
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3368_CAAX-box_protein_processing,_and_Domain_of_unknown_function_DUF6385


id: CL:3383
description: Mixed, incl. Ami_3, and Bacterial Ig-like domain, group 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3383_Mixed,_incl._Ami_3,_and_Bacterial_Ig-like_domain,_group_2


id: CL:3401
description: Mixed, incl. Spore coat protein S-like, and Tetratricopeptide-like helical domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3401_Mixed,_incl._Spore_coat_protein_S-like,_and_Tetratricopeptide-like_helical_domain_superfamily


id: CL:3402
description: Mixed, incl. Spore coat protein S-like, and Tetratricopeptide-like helical domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3402_Mixed,_incl._Spore_coat_protein_S-like,_and_Tetratricopeptide-like_helical_domain_superfamily


id: CL:3405
description: Spore coat protein S-like, and Tetratricopeptide-like helical domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3405_Spore_coat_protein_S-like,_and_Tetratricopeptide-like_helical_domain_superfamily


id: CL:3407
description: Spore coat protein S-like, and Glycosyltransferase Family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3407_Spore_coat_protein_S-like,_and_Glycosyltransferase_Family_4


id: CL:3436
description: Mixed, incl. Ami_3, and Oligopeptidase F
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3436_Mixed,_incl._Ami_3,_and_Oligopeptidase_F


id: CL:3448
description: Mixed, incl. Phosphonate and phosphinate metabolism, and Alba-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3448_Mixed,_incl._Phosphonate_and_phosphinate_metabolism,_and_Alba-like_domain_superfamily


id: CL:3460
description: Mixed, incl. Xenobiotic transport, and Uncharacterised protein, DegV family COG1307
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3460_Mixed,_incl._Xenobiotic_transport,_and_Uncharacterised_protein,_DegV_family_COG1307


id: CL:347
description: Mostly uncharacterized, incl. Ribosomal small subunit biogenesis, and UBA-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:347_Mostly_uncharacterized,_incl._Ribosomal_small_subunit_biogenesis,_and_UBA-like_superfamily


id: CL:3476
description: Mixed, incl. TPM domain, and Hedgehog signalling/DD-peptidase zinc-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3476_Mixed,_incl._TPM_domain,_and_Hedgehog_signalling/DD-peptidase_zinc-binding_domain_superfamily


id: CL:3485
description: Mostly uncharacterized, incl. Nitrogen fixation, and Rubrerythrin
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3485_Mostly_uncharacterized,_incl._Nitrogen_fixation,_and_Rubrerythrin


id: CL:3487
description: Mixed, incl. Rubrerythrin, and TSCPD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3487_Mixed,_incl._Rubrerythrin,_and_TSCPD_domain


id: CL:3489
description: Mixed, incl. Integrin alpha, N-terminal, and Rubrerythrin
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3489_Mixed,_incl._Integrin_alpha,_N-terminal,_and_Rubrerythrin


id: CL:3505
description: Mixed, incl. TSCPD domain, and Response to osmotic stress
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3505_Mixed,_incl._TSCPD_domain,_and_Response_to_osmotic_stress


id: CL:351
description: Mixed, incl. UBA-like superfamily, and De novo CTP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:351_Mixed,_incl._UBA-like_superfamily,_and_De_novo_CTP_biosynthetic_process


id: CL:3515
description: Mixed, incl. Nitrogen fixation, and Response to metal ion
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3515_Mixed,_incl._Nitrogen_fixation,_and_Response_to_metal_ion


id: CL:3517
description: Mixed, incl. Response to metal ion, and Cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3517_Mixed,_incl._Response_to_metal_ion,_and_Cyclase_activity


id: CL:3538
description: Mostly uncharacterized, incl. Enzyme binding, and MobA-like NTP transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3538_Mostly_uncharacterized,_incl._Enzyme_binding,_and_MobA-like_NTP_transferase


id: CL:3541
description: Mixed, incl. MobA-like NTP transferase, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3541_Mixed,_incl._MobA-like_NTP_transferase,_and_Coenzyme_A_biosynthesis


id: CL:3563
description: Mixed, incl. Base-excision repair, and Potassium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3563_Mixed,_incl._Base-excision_repair,_and_Potassium_ion_transport


id: CL:3564
description: Mixed, incl. Base-excision repair, and Potassium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3564_Mixed,_incl._Base-excision_repair,_and_Potassium_ion_transport


id: CL:3565
description: Mixed, incl. Base-excision repair, and ELP3/YhcC
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3565_Mixed,_incl._Base-excision_repair,_and_ELP3/YhcC


id: CL:3578
description: Mixed, incl. Potassium ion transport, and Septation
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3578_Mixed,_incl._Potassium_ion_transport,_and_Septation


id: CL:3591
description: Mixed, incl. Cyclo-ligase activity, and Transmembrane protein TMEM64
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3591_Mixed,_incl._Cyclo-ligase_activity,_and_Transmembrane_protein_TMEM64


id: CL:3602
description: Mostly uncharacterized, incl. RNA polymerase sigma-70 like, and Proteolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3602_Mostly_uncharacterized,_incl._RNA_polymerase_sigma-70_like,_and_Proteolysis


id: CL:3604
description: Mostly uncharacterized, incl. Ribonuclease HepT-like, and Nucleotidyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3604_Mostly_uncharacterized,_incl._Ribonuclease_HepT-like,_and_Nucleotidyltransferase_domain


id: CL:3605
description: Mostly uncharacterized, incl. Ribonuclease HepT-like, and Nucleotidyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3605_Mostly_uncharacterized,_incl._Ribonuclease_HepT-like,_and_Nucleotidyltransferase_domain


id: CL:3606
description: Mostly uncharacterized, incl. Ribonuclease HepT-like, and Nucleotidyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3606_Mostly_uncharacterized,_incl._Ribonuclease_HepT-like,_and_Nucleotidyltransferase_domain


id: CL:3608
description: Mixed, incl. Glycoprotein biosynthetic process, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3608_Mixed,_incl._Glycoprotein_biosynthetic_process,_and_Methyltransferase_domain


id: CL:3611
description: Mixed, incl. SbsA, Ig-like domain, and Domain of unknown function DUF5050
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3611_Mixed,_incl._SbsA,_Ig-like_domain,_and_Domain_of_unknown_function_DUF5050


id: CL:3626
description: Mixed, incl. Protein glycosylation, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3626_Mixed,_incl._Protein_glycosylation,_and_Methyltransferase_domain


id: CL:3640
description: Mixed, incl. Ribonuclease HepT-like, and Nucleotidyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3640_Mixed,_incl._Ribonuclease_HepT-like,_and_Nucleotidyltransferase_domain


id: CL:3643
description: Ribonuclease HepT-like, and Nucleotidyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3643_Ribonuclease_HepT-like,_and_Nucleotidyltransferase_domain


id: CL:3657
description: Mixed, incl. Sister chromatid cohesion, and Ribonuclease H-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3657_Mixed,_incl._Sister_chromatid_cohesion,_and_Ribonuclease_H-like_superfamily


id: CL:3669
description: Mixed, incl. Regulation of signaling, and Response to nitrosative stress
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3669_Mixed,_incl._Regulation_of_signaling,_and_Response_to_nitrosative_stress


id: CL:3684
description: Mixed, incl. BRCT domain, and Phage regulatory protein Rha (Phage_pRha)
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3684_Mixed,_incl._BRCT_domain,_and_Phage_regulatory_protein_Rha_(Phage_pRha)


id: CL:369
description: Ribosomal small subunit biogenesis, and PUA domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:369_Ribosomal_small_subunit_biogenesis,_and_PUA_domain_superfamily


id: CL:3704
description: Mostly uncharacterized, incl. RNA polymerase sigma-70 like, and Subtilase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3704_Mostly_uncharacterized,_incl._RNA_polymerase_sigma-70_like,_and_Subtilase_family


id: CL:3706
description: Mixed, incl. RNA polymerase sigma-70 like, and Subtilase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3706_Mixed,_incl._RNA_polymerase_sigma-70_like,_and_Subtilase_family


id: CL:3708
description: Mixed, incl. RNA polymerase sigma-70 like, and Subtilase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3708_Mixed,_incl._RNA_polymerase_sigma-70_like,_and_Subtilase_family


id: CL:3710
description: Mixed, incl. Lipase activity, and Subtilase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3710_Mixed,_incl._Lipase_activity,_and_Subtilase_family


id: CL:3747
description: Mixed, incl. ABC-2 family transporter protein, and Glycosyltransferase like family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3747_Mixed,_incl._ABC-2_family_transporter_protein,_and_Glycosyltransferase_like_family_2


id: CL:3761
description: Mixed, incl. Inorganic cation transmembrane transport, and Glycerophospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3761_Mixed,_incl._Inorganic_cation_transmembrane_transport,_and_Glycerophospholipid_metabolism


id: CL:3762
description: Mixed, incl. Proton-transporting two-sector ATPase complex, and Glycerophospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3762_Mixed,_incl._Proton-transporting_two-sector_ATPase_complex,_and_Glycerophospholipid_metabolism


id: CL:3763
description: Mixed, incl. Proton-transporting two-sector ATPase complex, and Glycerophospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3763_Mixed,_incl._Proton-transporting_two-sector_ATPase_complex,_and_Glycerophospholipid_metabolism


id: CL:3764
description: Mixed, incl. Proton-transporting two-sector ATPase complex, and Glycerophospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3764_Mixed,_incl._Proton-transporting_two-sector_ATPase_complex,_and_Glycerophospholipid_metabolism


id: CL:3765
description: Proton-transporting two-sector ATPase complex, and Calcium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3765_Proton-transporting_two-sector_ATPase_complex,_and_Calcium_ion_transport


id: CL:3767
description: Proton-transporting two-sector ATPase complex, and Calcium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3767_Proton-transporting_two-sector_ATPase_complex,_and_Calcium_ion_transport


id: CL:3771
description: Proton-transporting two-sector ATPase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3771_Proton-transporting_two-sector_ATPase_complex


id: CL:3772
description: Proton-transporting two-sector ATPase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3772_Proton-transporting_two-sector_ATPase_complex


id: CL:3774
description: Proton-transporting ATP synthase activity, rotational mechanism
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3774_Proton-transporting_ATP_synthase_activity,_rotational_mechanism


id: CL:3793
description: ATP synthesis, and ATP synthase subunit C
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3793_ATP_synthesis,_and_ATP_synthase_subunit_C


id: CL:380
description: RNA degradation, and NUDIX domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:380_RNA_degradation,_and_NUDIX_domain


id: CL:382
description: Mixed, incl. K Homology domain, type 1, and RNA 3-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:382_Mixed,_incl._K_Homology_domain,_type_1,_and_RNA_3-end_processing


id: CL:3822
description: Mixed, incl. CDP-alcohol phosphatidyltransferase, and Response to antibiotic
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3822_Mixed,_incl._CDP-alcohol_phosphatidyltransferase,_and_Response_to_antibiotic


id: CL:3824
description: CDP-alcohol phosphatidyltransferase, and Methylthiotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3824_CDP-alcohol_phosphatidyltransferase,_and_Methylthiotransferase


id: CL:3847
description: Mixed, incl. GerMN domain, and Zinc-ribbon domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3847_Mixed,_incl._GerMN_domain,_and_Zinc-ribbon_domain


id: CL:3864
description: Sodium:neurotransmitter symporter, and Transmembrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3864_Sodium:neurotransmitter_symporter,_and_Transmembrane


id: CL:3873
description: Mixed, incl. Quinone metabolic process, and Terpenoid backbone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3873_Mixed,_incl._Quinone_metabolic_process,_and_Terpenoid_backbone_biosynthesis


id: CL:3874
description: Mixed, incl. Quinone metabolic process, and Terpenoid backbone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3874_Mixed,_incl._Quinone_metabolic_process,_and_Terpenoid_backbone_biosynthesis


id: CL:3875
description: Mixed, incl. Quinone metabolic process, and Terpenoid backbone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3875_Mixed,_incl._Quinone_metabolic_process,_and_Terpenoid_backbone_biosynthesis


id: CL:3876
description: Mixed, incl. Terpenoid backbone biosynthesis, and NAD metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3876_Mixed,_incl._Terpenoid_backbone_biosynthesis,_and_NAD_metabolic_process


id: CL:3889
description: Mixed, incl. Ubiquinone metabolic process, and Flavoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3889_Mixed,_incl._Ubiquinone_metabolic_process,_and_Flavoprotein


id: CL:3900
description: Mixed, incl. CGCAxxGCC motif, and Amino-acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3900_Mixed,_incl._CGCAxxGCC_motif,_and_Amino-acid_transport


id: CL:3902
description: Mixed, incl. CGCAxxGCC motif, and Peptidoglycan binding-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3902_Mixed,_incl._CGCAxxGCC_motif,_and_Peptidoglycan_binding-like


id: CL:3919
description: Mixed, incl. Acetate metabolic process, and Biological process involved in symbiotic interaction
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3919_Mixed,_incl._Acetate_metabolic_process,_and_Biological_process_involved_in_symbiotic_interaction


id: CL:3929
description: Mixed, incl. CoA enzyme activase, and Bacterial regulatory proteins, tetR family
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3929_Mixed,_incl._CoA_enzyme_activase,_and_Bacterial_regulatory_proteins,_tetR_family


id: CL:3930
description: Mixed, incl. Bacterial regulatory proteins, tetR family, and Acyl-CoA N-acyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3930_Mixed,_incl._Bacterial_regulatory_proteins,_tetR_family,_and_Acyl-CoA_N-acyltransferase


id: CL:3932
description: Bacterial regulatory proteins, tetR family, and Lactose permease-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3932_Bacterial_regulatory_proteins,_tetR_family,_and_Lactose_permease-like


id: CL:3944
description: Mixed, incl. MMPL family, and Enzyme binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3944_Mixed,_incl._MMPL_family,_and_Enzyme_binding


id: CL:3955
description: Mixed, incl. Anaerobic glutamate catabolic process, and Queuosine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3955_Mixed,_incl._Anaerobic_glutamate_catabolic_process,_and_Queuosine_metabolic_process


id: CL:3957
description: Queuosine metabolic process, and FldB/FldC dehydratase alpha/beta subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3957_Queuosine_metabolic_process,_and_FldB/FldC_dehydratase_alpha/beta_subunit


id: CL:398
description: NUDIX domain, and Exoribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:398_NUDIX_domain,_and_Exoribonuclease_activity


id: CL:3988
description: Mixed, incl. Signaling, and Cilium
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3988_Mixed,_incl._Signaling,_and_Cilium


id: CL:3990
description: Mixed, incl. Signaling, and Cilium
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3990_Mixed,_incl._Signaling,_and_Cilium


id: CL:3994
description: Cilium, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:3994_Cilium,_and_Bacterial_chemotaxis


id: CL:4008
description: Bacterial-type flagellum basal body
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4008_Bacterial-type_flagellum_basal_body


id: CL:407
description: Mixed, incl. Protein folding, and Endopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:407_Mixed,_incl._Protein_folding,_and_Endopeptidase_activity


id: CL:408
description: Chaperone, and Protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:408_Chaperone,_and_Protein_catabolic_process


id: CL:4092
description: Protein-glutamine glutaminase activity, and CheW-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4092_Protein-glutamine_glutaminase_activity,_and_CheW-like_domain


id: CL:410
description: Stress response, and Peptidase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:410_Stress_response,_and_Peptidase_complex


id: CL:4124
description: Phosphorelay signal transduction system, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4124_Phosphorelay_signal_transduction_system,_and_Diguanylate_cyclase


id: CL:4125
description: Phosphorelay signal transduction system, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4125_Phosphorelay_signal_transduction_system,_and_Diguanylate_cyclase


id: CL:4126
description: His Kinase A (phosphoacceptor) domain, and OmpR/PhoB-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4126_His_Kinase_A_(phosphoacceptor)_domain,_and_OmpR/PhoB-type_DNA-binding_domain


id: CL:4127
description: His Kinase A (phosphoacceptor) domain, and OmpR/PhoB-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4127_His_Kinase_A_(phosphoacceptor)_domain,_and_OmpR/PhoB-type_DNA-binding_domain


id: CL:4129
description: His Kinase A (phosphoacceptor) domain, and OmpR/PhoB-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4129_His_Kinase_A_(phosphoacceptor)_domain,_and_OmpR/PhoB-type_DNA-binding_domain


id: CL:4130
description: Diguanylate cyclase, and His Kinase A (phosphoacceptor) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4130_Diguanylate_cyclase,_and_His_Kinase_A_(phosphoacceptor)_domain


id: CL:4132
description: Diguanylate cyclase, and PAS fold-4
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4132_Diguanylate_cyclase,_and_PAS_fold-4


id: CL:4165
description: His Kinase A (phosphoacceptor) domain, and OmpR/PhoB-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4165_His_Kinase_A_(phosphoacceptor)_domain,_and_OmpR/PhoB-type_DNA-binding_domain


id: CL:4166
description: His Kinase A (phosphoacceptor) domain, and OmpR/PhoB-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4166_His_Kinase_A_(phosphoacceptor)_domain,_and_OmpR/PhoB-type_DNA-binding_domain


id: CL:4175
description: PocR domain, and OmpR/PhoB-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4175_PocR_domain,_and_OmpR/PhoB-type_DNA-binding_domain


id: CL:4192
description: Mixed, incl. Sporulation and spore germination, and Nickel
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4192_Mixed,_incl._Sporulation_and_spore_germination,_and_Nickel


id: CL:4204
description: Mixed, incl. CarD-like/TRCF domain, and Trigger factor/SurA domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4204_Mixed,_incl._CarD-like/TRCF_domain,_and_Trigger_factor/SurA_domain_superfamily


id: CL:4216
description: Diguanylate cyclase activity, and HD-GYP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4216_Diguanylate_cyclase_activity,_and_HD-GYP_domain


id: CL:4227
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Enolase C-terminal domain-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4227_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Enolase_C-terminal_domain-like


id: CL:4229
description: tRNA threonylcarbamoyladenosine modification, and Protein acylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4229_tRNA_threonylcarbamoyladenosine_modification,_and_Protein_acylation


id: CL:4248
description: Mixed, incl. Phosphorelay signal transduction system, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4248_Mixed,_incl._Phosphorelay_signal_transduction_system,_and_Periplasmic_binding_protein


id: CL:4249
description: Mixed, incl. Periplasmic binding protein, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4249_Mixed,_incl._Periplasmic_binding_protein,_and_ABC_transporter,_permease


id: CL:4250
description: Mixed, incl. Periplasmic binding protein, and ABC-type carbohydrate transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4250_Mixed,_incl._Periplasmic_binding_protein,_and_ABC-type_carbohydrate_transporter_activity


id: CL:4251
description: Mixed, incl. Periplasmic binding protein, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4251_Mixed,_incl._Periplasmic_binding_protein,_and_ABC_transporter,_permease


id: CL:4253
description: Mixed, incl. Periplasmic binding protein, and D-ribose catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4253_Mixed,_incl._Periplasmic_binding_protein,_and_D-ribose_catabolic_process


id: CL:4255
description: D-ribose catabolic process, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4255_D-ribose_catabolic_process,_and_Periplasmic_binding_protein


id: CL:4281
description: Mixed, incl. Periplasmic binding protein, and CdaR, GGDEF-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4281_Mixed,_incl._Periplasmic_binding_protein,_and_CdaR,_GGDEF-like_domain


id: CL:4292
description: Mixed, incl. MacB, ATP-binding domain, and FtsX-like permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4292_Mixed,_incl._MacB,_ATP-binding_domain,_and_FtsX-like_permease_family


id: CL:4306
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4306_Mixed,_incl._Signal_transduction_response_regulator,_citrate/malate_metabolism,_and_ABC_transporter,_permease

description:
  Mixed, incl. Signal transduction response regulator, citrate/malate metabolism, and ABC transporter, permease


id: CL:4322
description: Mixed, incl. Histidine kinase, and DNA binding HTH domain, AraC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4322_Mixed,_incl._Histidine_kinase,_and_DNA_binding_HTH_domain,_AraC-type


id: CL:4324
description: Histidine kinase, and DNA binding HTH domain, AraC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4324_Histidine_kinase,_and_DNA_binding_HTH_domain,_AraC-type


id: CL:4327
description: Histidine kinase, and DNA binding HTH domain, AraC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4327_Histidine_kinase,_and_DNA_binding_HTH_domain,_AraC-type


id: CL:434
description: Peptidase M41, and Rhomboid family
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:434_Peptidase_M41,_and_Rhomboid_family


id: CL:4352
description: Mixed, incl. CstA, N-terminal domain, and Xylan metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4352_Mixed,_incl._CstA,_N-terminal_domain,_and_Xylan_metabolic_process


id: CL:4370
description: Mixed, incl. Membrane transport protein, and FlhB HrpN YscU SpaS Family
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4370_Mixed,_incl._Membrane_transport_protein,_and_FlhB_HrpN_YscU_SpaS_Family


id: CL:4381
description: Mixed, incl. Hydro-lyase activity, and MMPL family
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4381_Mixed,_incl._Hydro-lyase_activity,_and_MMPL_family


id: CL:4383
description: Mixed, incl. SAF domain, and MMPL family
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4383_Mixed,_incl._SAF_domain,_and_MMPL_family


id: CL:4384
description: Mixed, incl. SAF domain, and Enolase C-terminal domain-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4384_Mixed,_incl._SAF_domain,_and_Enolase_C-terminal_domain-like


id: CL:4393
description: Mixed, incl. MMPL family, and Fatty acid degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4393_Mixed,_incl._MMPL_family,_and_Fatty_acid_degradation


id: CL:4405
description: Mixed, incl. Schiff base-forming aldolase, active site, and Citrate transporter-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4405_Mixed,_incl._Schiff_base-forming_aldolase,_active_site,_and_Citrate_transporter-like_domain


id: CL:4418
description: Mostly uncharacterized, incl. DRTGG domain, and DDE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4418_Mostly_uncharacterized,_incl._DRTGG_domain,_and_DDE_domain


id: CL:4419
description: Mixed, incl. DRTGG domain, and Asparagine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4419_Mixed,_incl._DRTGG_domain,_and_Asparagine_metabolic_process


id: CL:4422
description: Mixed, incl. DRTGG domain, and Phosphonate and phosphinate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4422_Mixed,_incl._DRTGG_domain,_and_Phosphonate_and_phosphinate_metabolism


id: CL:4442
description: Mixed, incl. DNA photolyase activity, and Regulation of cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4442_Mixed,_incl._DNA_photolyase_activity,_and_Regulation_of_cell_division


id: CL:445
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:445_Mixed,_incl._Threonyl/alanyl_tRNA_synthetase,_class_II-like,_putative_editing_domain_superfamily,_and_Peptidase_S1C

description:
  Mixed, incl. Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain superfamily, and Peptidase S1C


id: CL:4453
description: Mixed, incl. RNA polymerase sigma factor 54 interaction domain, and ComA-like, MBL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4453_Mixed,_incl._RNA_polymerase_sigma_factor_54_interaction_domain,_and_ComA-like,_MBL_domain


id: CL:4454
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4454_RNA_polymerase_sigma_factor_54_interaction_domain,_and_N-acetylglucosamine-6-phosphate_deacetylase_activity

description:
  RNA polymerase sigma factor 54 interaction domain, and N-acetylglucosamine-6-phosphate deacetylase activity


id: CL:4456
description: DNA binding HTH domain, Fis-type, and PTS system fructose IIA component
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4456_DNA_binding_HTH_domain,_Fis-type,_and_PTS_system_fructose_IIA_component


id: CL:447
description: Mixed, incl. Unfolded protein binding, and Phosphoribulokinase/uridine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:447_Mixed,_incl._Unfolded_protein_binding,_and_Phosphoribulokinase/uridine_kinase


id: CL:4475
description: Mixed, incl. ComA-like, MBL domain, and Serine dehydratase alpha chain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4475_Mixed,_incl._ComA-like,_MBL_domain,_and_Serine_dehydratase_alpha_chain


id: CL:4486
description: Mixed, incl. Polysaccharide biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4486_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:4489
description: Mixed, incl. Polysaccharide biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4489_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:4490
description: Mixed, incl. Polysaccharide biosynthetic process, and O-Antigen ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4490_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_O-Antigen_ligase


id: CL:4491
description: Polysaccharide biosynthetic process, and O-Antigen ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4491_Polysaccharide_biosynthetic_process,_and_O-Antigen_ligase


id: CL:4492
description: Polysaccharide biosynthetic process, and Hexapeptide transferase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4492_Polysaccharide_biosynthetic_process,_and_Hexapeptide_transferase,_conserved_site


id: CL:4493
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferase 4-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4493_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferase_4-like


id: CL:4495
description: Mixed, incl. UDP binding domain, and Glycosyl transferase 4-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4495_Mixed,_incl._UDP_binding_domain,_and_Glycosyl_transferase_4-like


id: CL:4498
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4498_Mixed,_incl._Liposaccharide_metabolic_process,_and_NAD_binding_domain_of_6-phosphogluconate_dehydrogenase

description:
  Mixed, incl. Liposaccharide metabolic process, and NAD binding domain of 6-phosphogluconate dehydrogenase


id: CL:4527
description: Protein tyrosine kinase activity, and CoA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4527_Protein_tyrosine_kinase_activity,_and_CoA-binding_domain


id: CL:4543
description: Mixed, incl. Glycosyltransferase 2-like, and Proteoglycan metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4543_Mixed,_incl._Glycosyltransferase_2-like,_and_Proteoglycan_metabolic_process


id: CL:4546
description: Mixed, incl. Proteoglycan metabolic process, and Glycosyltransferase like family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4546_Mixed,_incl._Proteoglycan_metabolic_process,_and_Glycosyltransferase_like_family_2


id: CL:4566
description: Mixed, incl. Glycosyl transferase, family 1, and NADP+ binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4566_Mixed,_incl._Glycosyl_transferase,_family_1,_and_NADP+_binding


id: CL:4567
description: Mixed, incl. NADP+ binding, and DDE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4567_Mixed,_incl._NADP+_binding,_and_DDE_domain


id: CL:4569
description: Mixed, incl. NADP+ binding, and Mannose-6-phosphate isomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4569_Mixed,_incl._NADP+_binding,_and_Mannose-6-phosphate_isomerase


id: CL:4590
description: Mixed, incl. Glycosyltransferase Family 4, and Biosynthesis of unsaturated fatty acids
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4590_Mixed,_incl._Glycosyltransferase_Family_4,_and_Biosynthesis_of_unsaturated_fatty_acids


id: CL:4591
description: Glycosyltransferase Family 4, and N-acetylmuramoyl-L-alanine amidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4591_Glycosyltransferase_Family_4,_and_N-acetylmuramoyl-L-alanine_amidase_activity


id: CL:460
description: Peptidase S1C, and tRNA synthetases class II (A)
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:460_Peptidase_S1C,_and_tRNA_synthetases_class_II_(A)


id: CL:4600
description: Biosynthesis of unsaturated fatty acids, and Glycosyl transferase, family 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4600_Biosynthesis_of_unsaturated_fatty_acids,_and_Glycosyl_transferase,_family_1


id: CL:4610
description: Mixed, incl. Nuclease, putative, TT1808, and Mannose-6-phosphate isomerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4610_Mixed,_incl._Nuclease,_putative,_TT1808,_and_Mannose-6-phosphate_isomerase


id: CL:4629
description: Mixed, incl. ABC transporter-like, ATP-binding domain, and Quorum sensing
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4629_Mixed,_incl._ABC_transporter-like,_ATP-binding_domain,_and_Quorum_sensing


id: CL:4630
description: Mixed, incl. ABC transporter-like, ATP-binding domain, and Quorum sensing
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4630_Mixed,_incl._ABC_transporter-like,_ATP-binding_domain,_and_Quorum_sensing


id: CL:4631
description: ABC transporter-like, ATP-binding domain, and Transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4631_ABC_transporter-like,_ATP-binding_domain,_and_Transporter_activity


id: CL:4632
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4632_Mixed,_incl._ABC_transporter-like,_ATP-binding_domain,_and_Transition_metal_ion_transmembrane_transporter_activity

description:
  Mixed, incl. ABC transporter-like, ATP-binding domain, and Transition metal ion transmembrane transporter activity


id: CL:4633
description: Mixed, incl. Latent infection - Other responses of Mtb to phagocytosis, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4633_Mixed,_incl._Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis,_and_Peptide_transport


id: CL:4634
description: Mixed, incl. Type 1 protein exporter, and ABC transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4634_Mixed,_incl._Type_1_protein_exporter,_and_ABC_transporter


id: CL:4636
description: Mixed, incl. Type 1 protein exporter, and ABC transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4636_Mixed,_incl._Type_1_protein_exporter,_and_ABC_transporter


id: CL:4664
description: Peptide transport, and Nickel cation transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4664_Peptide_transport,_and_Nickel_cation_transmembrane_transporter_activity


id: CL:4666
description: Peptide transport, and Nickel cation transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4666_Peptide_transport,_and_Nickel_cation_transmembrane_transporter_activity


id: CL:4676
description: Peptide transport, and Nickel cation transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4676_Peptide_transport,_and_Nickel_cation_transmembrane_transporter_activity


id: CL:4688
description: Mixed, incl. ABC transporter, CbiO/EcfA subunit, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4688_Mixed,_incl._ABC_transporter,_CbiO/EcfA_subunit,_and_Cobalt_transport_protein


id: CL:4689
description: Mixed, incl. ABC transporter, CbiO/EcfA subunit, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4689_Mixed,_incl._ABC_transporter,_CbiO/EcfA_subunit,_and_Cobalt_transport_protein


id: CL:4690
description: ABC transporter, CbiO/EcfA subunit, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4690_ABC_transporter,_CbiO/EcfA_subunit,_and_Cobalt_transport_protein


id: CL:4693
description: ABC transporter, CbiO/EcfA subunit, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4693_ABC_transporter,_CbiO/EcfA_subunit,_and_Cobalt_transport_protein


id: CL:4712
description: ABC transporter, CbiO/EcfA subunit, and Nucleoside catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4712_ABC_transporter,_CbiO/EcfA_subunit,_and_Nucleoside_catabolic_process


id: CL:4721
description: Mixed, incl. PurE domain, and Queuosine biosynthesis protein QueC
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4721_Mixed,_incl._PurE_domain,_and_Queuosine_biosynthesis_protein_QueC


id: CL:4732
description: Mixed, incl. Vitamin transport, and YqgF/RNase H-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4732_Mixed,_incl._Vitamin_transport,_and_YqgF/RNase_H-like_domain


id: CL:4744
description: Mixed, incl. Outer membrane efflux protein, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4744_Mixed,_incl._Outer_membrane_efflux_protein,_and_MacB,_ATP-binding_domain


id: CL:4745
description: Mixed, incl. Outer membrane efflux protein, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4745_Mixed,_incl._Outer_membrane_efflux_protein,_and_MacB,_ATP-binding_domain


id: CL:4747
description: Mixed, incl. Outer membrane efflux protein, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4747_Mixed,_incl._Outer_membrane_efflux_protein,_and_MacB,_ATP-binding_domain


id: CL:4750
description: MacB-like periplasmic core domain, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4750_MacB-like_periplasmic_core_domain,_and_MacB,_ATP-binding_domain


id: CL:4779
description: Mixed, incl. Cell adhesion, and ABC 3 transport family
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4779_Mixed,_incl._Cell_adhesion,_and_ABC_3_transport_family


id: CL:478
description: Mixed, incl. Ribosome biogenesis, and Elp3/MiaA/NifB-like, radical SAM core domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:478_Mixed,_incl._Ribosome_biogenesis,_and_Elp3/MiaA/NifB-like,_radical_SAM_core_domain


id: CL:4792
description: Branched-chain amino acid transport, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4792_Branched-chain_amino_acid_transport,_and_Leucine-binding_protein_domain


id: CL:4793
description: Branched-chain amino acid transport, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4793_Branched-chain_amino_acid_transport,_and_Leucine-binding_protein_domain


id: CL:480
description: Mixed, incl. K Homology domain, type 2, and Acid phosphatase homologues
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:480_Mixed,_incl._K_Homology_domain,_type_2,_and_Acid_phosphatase_homologues


id: CL:4802
description: Branched-chain amino acid transport, and Leucine-binding protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4802_Branched-chain_amino_acid_transport,_and_Leucine-binding_protein_domain


id: CL:4812
description: Mixed, incl. Phosphate transport system permease protein 1, and ParB/Sulfiredoxin superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4812_Mixed,_incl._Phosphate_transport_system_permease_protein_1,_and_ParB/Sulfiredoxin_superfamily


id: CL:4823
description: Mixed, incl. Peptidase U32, and Peptidyl-serine acetylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4823_Mixed,_incl._Peptidase_U32,_and_Peptidyl-serine_acetylation


id: CL:4839
description: Mixed, incl. Ornithine metabolic process, and Methylaspartate mutase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4839_Mixed,_incl._Ornithine_metabolic_process,_and_Methylaspartate_mutase_activity


id: CL:4840
description: Mixed, incl. Ornithine metabolic process, and Polyketide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4840_Mixed,_incl._Ornithine_metabolic_process,_and_Polyketide_metabolic_process


id: CL:4841
description: Mixed, incl. Ornithine metabolic process, and Polyketide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4841_Mixed,_incl._Ornithine_metabolic_process,_and_Polyketide_metabolic_process


id: CL:4842
description: Ornithine metabolic process, and D-Lysine 5,6-aminomutase alpha subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4842_Ornithine_metabolic_process,_and_D-Lysine_5,6-aminomutase_alpha_subunit


id: CL:4845
description: D-Arginine and D-ornithine metabolism, and Ornithine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4845_D-Arginine_and_D-ornithine_metabolism,_and_Ornithine_metabolic_process


id: CL:4865
description: Polyketide metabolic process, and Major Facilitator Superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4865_Polyketide_metabolic_process,_and_Major_Facilitator_Superfamily


id: CL:4878
description: Mixed, incl. Crp-type HTH domain, and Cellular modified amino acid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4878_Mixed,_incl._Crp-type_HTH_domain,_and_Cellular_modified_amino_acid_catabolic_process


id: CL:4893
description: Mixed, incl. Glutamate catabolic process, and Oxo-acid-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4893_Mixed,_incl._Glutamate_catabolic_process,_and_Oxo-acid-lyase_activity


id: CL:4895
description: Mixed, incl. Oxo-acid-lyase activity, and Acyl carrier activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4895_Mixed,_incl._Oxo-acid-lyase_activity,_and_Acyl_carrier_activity


id: CL:4908
description: Glutamate catabolic process, and MutL protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4908_Glutamate_catabolic_process,_and_MutL_protein


id: CL:4922
description: Mixed, incl. DNA modification, and DEAD-like helicases superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4922_Mixed,_incl._DNA_modification,_and_DEAD-like_helicases_superfamily


id: CL:4924
description: Mixed, incl. DNA modification, and Transmembrane protein TMEM64
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4924_Mixed,_incl._DNA_modification,_and_Transmembrane_protein_TMEM64


id: CL:4926
description: Mixed, incl. DNA modification, and WLM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4926_Mixed,_incl._DNA_modification,_and_WLM_domain


id: CL:4929
description: Mixed, incl. SWI2/SNF2 ATPase, and Xenobiotic transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4929_Mixed,_incl._SWI2/SNF2_ATPase,_and_Xenobiotic_transport


id: CL:494
description: Mixed, incl. Positive regulation of gene expression, and Anaerobic coproporphyrinogen-III oxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:494_Mixed,_incl._Positive_regulation_of_gene_expression,_and_Anaerobic_coproporphyrinogen-III_oxidase


id: CL:4944
description: Type I restriction modification DNA specificity domain superfamily, and WLM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4944_Type_I_restriction_modification_DNA_specificity_domain_superfamily,_and_WLM_domain


id: CL:4964
description: Mixed, incl. Transmembrane protein TMEM64, and Phosphotransferase enzyme family
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4964_Mixed,_incl._Transmembrane_protein_TMEM64,_and_Phosphotransferase_enzyme_family


id: CL:4980
description: Mixed, incl. Helicase/UvrB, N-terminal, and DNA alkylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4980_Mixed,_incl._Helicase/UvrB,_N-terminal,_and_DNA_alkylation


id: CL:4981
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4981_Mixed,_incl._N4/N6-methyltransferase,_Type_III_restriction-modification_enzyme_EcoPI_Mod_subunit-like,_and_Helicase/UvrB,_N-terminal

description:
  Mixed, incl. N4/N6-methyltransferase, Type III restriction-modification enzyme EcoPI Mod subunit-like, and Helicase/UvrB, N-terminal


id: CL:4982
description: Mixed, incl. Homeobox, and Protein of unknown function DUF960
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4982_Mixed,_incl._Homeobox,_and_Protein_of_unknown_function_DUF960


id: CL:4984
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:4984_Mixed,_incl._Protein_of_unknown_function_DUF960,_and_N4/N6-methyltransferase,_Type_III_restriction-modification_enzyme_EcoPI_Mod_subunit-like

description:
  Mixed, incl. Protein of unknown function DUF960, and N4/N6-methyltransferase, Type III restriction-modification enzyme EcoPI Mod subunit-like


id: CL:5001
description: Mixed, incl. SNF2, N-terminal, and AAA domain, putative AbiEii toxin, Type IV TA system
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5001_Mixed,_incl._SNF2,_N-terminal,_and_AAA_domain,_putative_AbiEii_toxin,_Type_IV_TA_system


id: CL:5012
description: Mixed, incl. AAA domain, and Macro domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5012_Mixed,_incl._AAA_domain,_and_Macro_domain


id: CL:5013
description: Mixed, incl. Helicase/UvrB, N-terminal, and HIT-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5013_Mixed,_incl._Helicase/UvrB,_N-terminal,_and_HIT-like_superfamily


id: CL:503
description: Mixed, incl. ParB/Sulfiredoxin, and Protein carrier chaperone
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:503_Mixed,_incl._ParB/Sulfiredoxin,_and_Protein_carrier_chaperone


id: CL:5037
description: Mostly uncharacterized, incl. Base excision repair, and ATPase, AAA-3
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5037_Mostly_uncharacterized,_incl._Base_excision_repair,_and_ATPase,_AAA-3


id: CL:5038
description: Mostly uncharacterized, incl. Base excision repair, and ATPase, AAA-3
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5038_Mostly_uncharacterized,_incl._Base_excision_repair,_and_ATPase,_AAA-3


id: CL:5039
description: Mostly uncharacterized, incl. ATPase, AAA-3, and Domain of unknown function DUF58
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5039_Mostly_uncharacterized,_incl._ATPase,_AAA-3,_and_Domain_of_unknown_function_DUF58


id: CL:5041
description: Mixed, incl. Base excision repair, and ATPase, AAA-3
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5041_Mixed,_incl._Base_excision_repair,_and_ATPase,_AAA-3


id: CL:5043
description: Mixed, incl. ATPase, AAA-3, and Response to radiation
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5043_Mixed,_incl._ATPase,_AAA-3,_and_Response_to_radiation


id: CL:505
description: Mixed, incl. Protein carrier chaperone, and RNA (guanine-N7)-methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:505_Mixed,_incl._Protein_carrier_chaperone,_and_RNA_(guanine-N7)-methylation


id: CL:5068
description: DGC domain, and HesB-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5068_DGC_domain,_and_HesB-like_domain_superfamily


id: CL:5083
description: Mixed, incl. Alanine transport, and Major Facilitator Superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5083_Mixed,_incl._Alanine_transport,_and_Major_Facilitator_Superfamily


id: CL:5097
description: Mixed, incl. Domain of unknown function DUF5668, and Helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5097_Mixed,_incl._Domain_of_unknown_function_DUF5668,_and_Helix-turn-helix_domain


id: CL:5111
description: Mixed, incl. Na+/H+ antiporter, NhaC-like, C-terminal, and Inorganic anion transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5111_Mixed,_incl._Na+/H+_antiporter,_NhaC-like,_C-terminal,_and_Inorganic_anion_transmembrane_transport


id: CL:5112
description: Mixed, incl. Na+/H+ antiporter, NhaC-like, C-terminal, and Inorganic anion transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5112_Mixed,_incl._Na+/H+_antiporter,_NhaC-like,_C-terminal,_and_Inorganic_anion_transmembrane_transport


id: CL:5113
description: Mixed, incl. Na+/H+ antiporter, NhaC-like, C-terminal, and Uracil-DNA glycosylase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5113_Mixed,_incl._Na+/H+_antiporter,_NhaC-like,_C-terminal,_and_Uracil-DNA_glycosylase-like


id: CL:5114
description: Mixed, incl. Na+/H+ antiporter, NhaC-like, C-terminal, and Regulation of RNA stability
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5114_Mixed,_incl._Na+/H+_antiporter,_NhaC-like,_C-terminal,_and_Regulation_of_RNA_stability


id: CL:5115
description: Mixed, incl. Regulation of RNA stability, and Negative regulation of sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5115_Mixed,_incl._Regulation_of_RNA_stability,_and_Negative_regulation_of_sporulation


id: CL:5130
description: Na+/H+ antiporter, NhaC-like, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5130_Na+/H+_antiporter,_NhaC-like,_C-terminal


id: CL:5142
description: Uracil-DNA glycosylase-like, and Protein of unknown function DUF3892
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5142_Uracil-DNA_glycosylase-like,_and_Protein_of_unknown_function_DUF3892


id: CL:5155
description: Fluoride transmembrane transport, and Aminoacyl-tRNA editing domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5155_Fluoride_transmembrane_transport,_and_Aminoacyl-tRNA_editing_domain


id: CL:5171
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5171_Mixed,_incl._L,D-transpeptidase_catalytic_domain,_and_Hedgehog_signalling/DD-peptidase_zinc-binding_domain_superfamily

description:
  Mixed, incl. L,D-transpeptidase catalytic domain, and Hedgehog signalling/DD-peptidase zinc-binding domain superfamily


id: CL:5187
description: Mixed, incl. Primosome complex, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5187_Mixed,_incl._Primosome_complex,_and_DNA_integration


id: CL:5188
description: Mostly uncharacterized, incl. Phosphopentomutase, and tRNA-specific adenosine deaminase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5188_Mostly_uncharacterized,_incl._Phosphopentomutase,_and_tRNA-specific_adenosine_deaminase_activity


id: CL:5190
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5190_Mostly_uncharacterized,_incl._Phosphopentomutase,_and_Cys/Met_metabolism,_pyridoxal_phosphate-dependent_enzyme

description:
  Mostly uncharacterized, incl. Phosphopentomutase, and Cys/Met metabolism, pyridoxal phosphate-dependent enzyme


id: CL:5192
description: Mixed, incl. Phosphopentomutase, and Cys/Met metabolism, pyridoxal phosphate-dependent enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5192_Mixed,_incl._Phosphopentomutase,_and_Cys/Met_metabolism,_pyridoxal_phosphate-dependent_enzyme


id: CL:522
description: ParB/Sulfiredoxin, and Gdt1 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:522_ParB/Sulfiredoxin,_and_Gdt1_family


id: CL:5225
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5225_IstB-like_ATP_binding_protein,_and_DNA_replication_protein_DnaC/insertion_sequence_putative_ATP-binding_protein

description:
  IstB-like ATP binding protein, and DNA replication protein DnaC/insertion sequence putative ATP-binding protein


id: CL:5230
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5230_DNA_replication_protein_DnaC/insertion_sequence_putative_ATP-binding_protein,_and_IstB-like_ATP_binding_protein

description:
  DNA replication protein DnaC/insertion sequence putative ATP-binding protein, and IstB-like ATP binding protein


id: CL:5249
description: Mostly uncharacterized, incl. DnaD domain, and DNA strand elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5249_Mostly_uncharacterized,_incl._DnaD_domain,_and_DNA_strand_elongation


id: CL:5251
description: Mixed, incl. DnaD domain, and DNA strand elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5251_Mixed,_incl._DnaD_domain,_and_DNA_strand_elongation


id: CL:5276
description: Mixed, incl. DNA metabolic process, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5276_Mixed,_incl._DNA_metabolic_process,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:5277
description: Mostly uncharacterized, incl. DNA recombination, and Endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5277_Mostly_uncharacterized,_incl._DNA_recombination,_and_Endonuclease


id: CL:5278
description: Mostly uncharacterized, incl. DNA recombination, and Endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5278_Mostly_uncharacterized,_incl._DNA_recombination,_and_Endonuclease


id: CL:5279
description: Mixed, incl. DNA recombination, and Endonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5279_Mixed,_incl._DNA_recombination,_and_Endonuclease


id: CL:5280
description: Mixed, incl. DNA recombination, and Restriction endonuclease type II-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5280_Mixed,_incl._DNA_recombination,_and_Restriction_endonuclease_type_II-like


id: CL:5282
description: Mostly uncharacterized, incl. DNA integration, and Resolvase, N terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5282_Mostly_uncharacterized,_incl._DNA_integration,_and_Resolvase,_N_terminal_domain


id: CL:5284
description: Mostly uncharacterized, incl. DNA integration, and Resolvase, N terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5284_Mostly_uncharacterized,_incl._DNA_integration,_and_Resolvase,_N_terminal_domain


id: CL:5285
description: Mixed, incl. DNA integration, and Protein transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5285_Mixed,_incl._DNA_integration,_and_Protein_transmembrane_transport


id: CL:5286
description: Mixed, incl. DNA integration, and Helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5286_Mixed,_incl._DNA_integration,_and_Helix-turn-helix_domain


id: CL:5288
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5288_Mixed,_incl._DDE_transposase_retroviral_integrase_sub-family,_and_DNA_Primase,_CHC2-type_zinc_finger

description:
  Mixed, incl. DDE transposase retroviral integrase sub-family, and DNA Primase, CHC2-type zinc finger


id: CL:5289
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5289_Mixed,_incl._DDE_transposase_retroviral_integrase_sub-family,_and_tRNA_endonuclease-like_domain_superfamily

description:
  Mixed, incl. DDE transposase retroviral integrase sub-family, and tRNA endonuclease-like domain superfamily


id: CL:5298
description: Mixed, incl. DNA Primase, CHC2-type zinc finger, and IrrE N-terminal-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5298_Mixed,_incl._DNA_Primase,_CHC2-type_zinc_finger,_and_IrrE_N-terminal-like_domain


id: CL:5308
description: Mixed, incl. Helix-turn-helix domain, and Core-binding (CB) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5308_Mixed,_incl._Helix-turn-helix_domain,_and_Core-binding_(CB)_domain


id: CL:5317
description: Mixed, incl. ATP-grasp fold, RimK-type, and SEC-C motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5317_Mixed,_incl._ATP-grasp_fold,_RimK-type,_and_SEC-C_motif


id: CL:532
description: Mixed, incl. RNA methylation, and Thiamine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:532_Mixed,_incl._RNA_methylation,_and_Thiamine_metabolism


id: CL:5328
description: Mixed, incl. Resolvase, N terminal domain, and C-5 methylation of cytosine
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5328_Mixed,_incl._Resolvase,_N_terminal_domain,_and_C-5_methylation_of_cytosine


id: CL:5331
description: Mixed, incl. C-5 methylation of cytosine, and Deubiquitinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5331_Mixed,_incl._C-5_methylation_of_cytosine,_and_Deubiquitinase_activity


id: CL:534
description: Mixed, incl. rRNA methyltransferase activity, and Thiamine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:534_Mixed,_incl._rRNA_methyltransferase_activity,_and_Thiamine_metabolism


id: CL:536
description: Mixed, incl. rRNA methyltransferase activity, and Flavoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:536_Mixed,_incl._rRNA_methyltransferase_activity,_and_Flavoprotein


id: CL:5366
description: Mixed, incl. Restriction endonuclease type II-like, and Nucleoplasm
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5366_Mixed,_incl._Restriction_endonuclease_type_II-like,_and_Nucleoplasm


id: CL:5379
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5379_Mostly_uncharacterized,_incl._DNA-binding_recombinase_domain_superfamily,_and_CopZ,_zinc_binding_domain

description:
  Mostly uncharacterized, incl. DNA-binding recombinase domain superfamily, and CopZ, zinc binding domain


id: CL:538
description: Mixed, incl. PASTA domain, and NADPH regeneration
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:538_Mixed,_incl._PASTA_domain,_and_NADPH_regeneration


id: CL:5380
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5380_Mostly_uncharacterized,_incl._DNA-binding_recombinase_domain_superfamily,_and_CopZ,_zinc_binding_domain

description:
  Mostly uncharacterized, incl. DNA-binding recombinase domain superfamily, and CopZ, zinc binding domain


id: CL:5382
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5382_Mostly_uncharacterized,_incl._DNA-binding_recombinase_domain_superfamily,_and_CopZ,_zinc_binding_domain

description:
  Mostly uncharacterized, incl. DNA-binding recombinase domain superfamily, and CopZ, zinc binding domain


id: CL:5384
description: Mostly uncharacterized, incl. Cytolysis, and Host cell
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5384_Mostly_uncharacterized,_incl._Cytolysis,_and_Host_cell


id: CL:5387
description: Mixed, incl. Host cell, and ATP-dependent Clp protease proteolytic subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5387_Mixed,_incl._Host_cell,_and_ATP-dependent_Clp_protease_proteolytic_subunit


id: CL:5388
description: Mixed, incl. Host cell, and ATP-dependent Clp protease proteolytic subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5388_Mixed,_incl._Host_cell,_and_ATP-dependent_Clp_protease_proteolytic_subunit


id: CL:5422
description: Mixed, incl. DNA-binding recombinase domain superfamily, and CopZ, zinc binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5422_Mixed,_incl._DNA-binding_recombinase_domain_superfamily,_and_CopZ,_zinc_binding_domain


id: CL:5424
description: CopZ, zinc binding domain, and DNA-binding recombinase domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5424_CopZ,_zinc_binding_domain,_and_DNA-binding_recombinase_domain_superfamily


id: CL:5452
description: Mixed, incl. DNA strand exchange activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5452_Mixed,_incl._DNA_strand_exchange_activity


id: CL:5464
description: Mostly uncharacterized, incl. Helix-turn-helix XRE-family like proteins, and Amidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5464_Mostly_uncharacterized,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Amidase_activity


id: CL:5465
description: Mixed, incl. Amidase activity, and RNA polymerase sigma factor, region 3/4-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5465_Mixed,_incl._Amidase_activity,_and_RNA_polymerase_sigma_factor,_region_3/4-like


id: CL:5467
description: Mixed, incl. Amidase activity, and RNA polymerase sigma factor, region 3/4-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5467_Mixed,_incl._Amidase_activity,_and_RNA_polymerase_sigma_factor,_region_3/4-like


id: CL:5486
description: Mixed, incl. DNA replication, synthesis of RNA primer
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5486_Mixed,_incl._DNA_replication,_synthesis_of_RNA_primer


id: CL:5499
description: Mixed, incl. Spo0E like sporulation regulatory protein, and Double-stranded DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5499_Mixed,_incl._Spo0E_like_sporulation_regulatory_protein,_and_Double-stranded_DNA_binding


id: CL:5512
description: Mostly uncharacterized, incl. DNA modification, and Pfam phage integrase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5512_Mostly_uncharacterized,_incl._DNA_modification,_and_Pfam_phage_integrase_family


id: CL:5513
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5513_Mostly_uncharacterized,_incl._DNA_modification,_and_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides

description:
  Mostly uncharacterized, incl. DNA modification, and Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides


id: CL:5514
description: Mostly uncharacterized, incl. DNA modification, and Phage holin, LL-H family
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5514_Mostly_uncharacterized,_incl._DNA_modification,_and_Phage_holin,_LL-H_family


id: CL:5516
description: Mostly uncharacterized, incl. GTPase regulator activity, and Tape measure protein N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5516_Mostly_uncharacterized,_incl._GTPase_regulator_activity,_and_Tape_measure_protein_N-terminal


id: CL:5517
description: Mostly uncharacterized, incl. Tape measure protein N-terminal, and Pyrimidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5517_Mostly_uncharacterized,_incl._Tape_measure_protein_N-terminal,_and_Pyrimidine_metabolism


id: CL:5519
description: Mostly uncharacterized, incl. Tape measure protein N-terminal, and Pyrimidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5519_Mostly_uncharacterized,_incl._Tape_measure_protein_N-terminal,_and_Pyrimidine_metabolism


id: CL:5524
description: Mixed, incl. Pyrimidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5524_Mixed,_incl._Pyrimidine_metabolism


id: CL:5554
description: Mixed, incl. GTPase regulator activity, and Portal protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5554_Mixed,_incl._GTPase_regulator_activity,_and_Portal_protein


id: CL:5572
description: Restriction/modification DNA-methyltransferase, and Adenine modification methylase, M.EcoRV-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5572_Restriction/modification_DNA-methyltransferase,_and_Adenine_modification_methylase,_M.EcoRV-type


id: CL:5587
description: Mixed, incl. Asparaginase activity, and Nucleophile aminohydrolases, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5587_Mixed,_incl._Asparaginase_activity,_and_Nucleophile_aminohydrolases,_N-terminal


id: CL:5598
description: Mixed, incl. Pfam phage integrase family, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5598_Mixed,_incl._Pfam_phage_integrase_family,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:5599
description: Mixed, incl. Helix-turn-helix XRE-family like proteins, and IrrE N-terminal-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5599_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_IrrE_N-terminal-like_domain


id: CL:5612
description: Pfam phage integrase family, and Helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5612_Pfam_phage_integrase_family,_and_Helix-turn-helix_domain


id: CL:5622
description: Mixed, incl. Bacterial microcompartment, and Portal protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5622_Mixed,_incl._Bacterial_microcompartment,_and_Portal_protein


id: CL:5623
description: Bacterial microcompartment, and Hsp70 protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5623_Bacterial_microcompartment,_and_Hsp70_protein


id: CL:5653
description: Mixed, incl. Citrate transporter, and Phosphotransferase enzyme family
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5653_Mixed,_incl._Citrate_transporter,_and_Phosphotransferase_enzyme_family


id: CL:5664
description: Mixed, incl. Portal protein, and Zinc finger, CHC2-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5664_Mixed,_incl._Portal_protein,_and_Zinc_finger,_CHC2-type


id: CL:5665
description: Mostly uncharacterized, incl. Zinc finger, CHC2-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5665_Mostly_uncharacterized,_incl._Zinc_finger,_CHC2-type


id: CL:5680
description: Mixed, incl. Portal protein, and Bacterial Ig-like domain, group 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5680_Mixed,_incl._Portal_protein,_and_Bacterial_Ig-like_domain,_group_2


id: CL:569
description: N-terminal domain of 16S rRNA methyltransferase RsmF, and THUMP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:569_N-terminal_domain_of_16S_rRNA_methyltransferase_RsmF,_and_THUMP_domain


id: CL:5694
description: Mixed, incl. ACT domain, and Transposase IS200 like
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5694_Mixed,_incl._ACT_domain,_and_Transposase_IS200_like


id: CL:5695
description: Mixed, incl. ACT domain, and Bile acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5695_Mixed,_incl._ACT_domain,_and_Bile_acid_metabolic_process


id: CL:5708
description: Mixed, incl. FAD dependent protein, and HotDog domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5708_Mixed,_incl._FAD_dependent_protein,_and_HotDog_domain_superfamily


id: CL:5718
description: Mixed, incl. Transposition, and IS66 Orf2 like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5718_Mixed,_incl._Transposition,_and_IS66_Orf2_like_protein


id: CL:5719
description: Mixed, incl. IS66 Orf2 like protein, and DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5719_Mixed,_incl._IS66_Orf2_like_protein,_and_DDE_transposase_sub-family


id: CL:5721
description: Mixed, incl. DDE transposase sub-family, and IS66 Orf2 like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5721_Mixed,_incl._DDE_transposase_sub-family,_and_IS66_Orf2_like_protein


id: CL:5722
description: Mixed, incl. Transposase, and HTH-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5722_Mixed,_incl._Transposase,_and_HTH-like_domain


id: CL:5737
description: Mixed, incl. DDE transposase sub-family, and IS66 Orf2 like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5737_Mixed,_incl._DDE_transposase_sub-family,_and_IS66_Orf2_like_protein


id: CL:5756
description: Mixed, incl. Homeobox, and IS66 Orf2 like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5756_Mixed,_incl._Homeobox,_and_IS66_Orf2_like_protein


id: CL:5766
description: Mixed, incl. Transposase IS204/IS1001/IS1096/IS1165, DDE domain, and HTH-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5766_Mixed,_incl._Transposase_IS204/IS1001/IS1096/IS1165,_DDE_domain,_and_HTH-like_domain


id: CL:5768
description: Mixed, incl. Transposase IS204/IS1001/IS1096/IS1165, DDE domain, and HTH-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5768_Mixed,_incl._Transposase_IS204/IS1001/IS1096/IS1165,_DDE_domain,_and_HTH-like_domain


id: CL:5784
description: Mixed, incl. Glycosyl hydrolases family 18 (GH18) active site, and Zinc/iron permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5784_Mixed,_incl._Glycosyl_hydrolases_family_18_(GH18)_active_site,_and_Zinc/iron_permease


id: CL:5803
description: Mixed, incl. PilZ domain, and PUA domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5803_Mixed,_incl._PilZ_domain,_and_PUA_domain_superfamily


id: CL:5817
description: Mostly uncharacterized, incl. HSP20-like chaperone, and MarR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5817_Mostly_uncharacterized,_incl._HSP20-like_chaperone,_and_MarR-type_HTH_domain


id: CL:5818
description: Mixed, incl. Alpha/Beta hydrolase fold, and Galactose-binding-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5818_Mixed,_incl._Alpha/Beta_hydrolase_fold,_and_Galactose-binding-like_domain_superfamily


id: CL:5829
description: Mixed, incl. HSP20-like chaperone, and MarR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5829_Mixed,_incl._HSP20-like_chaperone,_and_MarR-type_HTH_domain


id: CL:5838
description: Mixed, incl. RNA-directed DNA polymerase activity, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5838_Mixed,_incl._RNA-directed_DNA_polymerase_activity,_and_Response_to_virus


id: CL:5840
description: Response to virus, and RNA-templated DNA biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5840_Response_to_virus,_and_RNA-templated_DNA_biosynthetic_process


id: CL:5845
description: Response to virus, and Maintenance of DNA repeat elements
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5845_Response_to_virus,_and_Maintenance_of_DNA_repeat_elements


id: CL:5867
description: Mixed, incl. TPR repeat, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5867_Mixed,_incl._TPR_repeat,_and_Nitrogen_metabolism


id: CL:5880
description: Transposase IS200-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5880_Transposase_IS200-like_superfamily


id: CL:5895
description: Mixed, incl. Cro/C1-type helix-turn-helix domain, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5895_Mixed,_incl._Cro/C1-type_helix-turn-helix_domain,_and_Signal


id: CL:590
description: Mixed, incl. DNA repair, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:590_Mixed,_incl._DNA_repair,_and_DNA_replication


id: CL:593
description: Mixed, incl. DNA replication, and SOS response
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:593_Mixed,_incl._DNA_replication,_and_SOS_response


id: CL:594
description: Mixed, incl. DNA replication, and SOS response
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:594_Mixed,_incl._DNA_replication,_and_SOS_response


id: CL:595
description: Mixed, incl. DNA replication, and SOS response
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:595_Mixed,_incl._DNA_replication,_and_SOS_response


id: CL:5955
description: Protein of unknown function DUF960, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:5955_Protein_of_unknown_function_DUF960,_and_Signal


id: CL:596
description: DNA-directed DNA polymerase activity, and DNA repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:596_DNA-directed_DNA_polymerase_activity,_and_DNA_repair


id: CL:597
description: SOS response, and DNA damage sensor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:597_SOS_response,_and_DNA_damage_sensor_activity


id: CL:599
description: DNA damage sensor activity, and DNA-directed DNA polymerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:599_DNA_damage_sensor_activity,_and_DNA-directed_DNA_polymerase


id: CL:617
description: Excinuclease ABC activity, and BRCT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:617_Excinuclease_ABC_activity,_and_BRCT_domain


id: CL:628
description: DNA replication, and Bacterial nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:628_DNA_replication,_and_Bacterial_nucleoid


id: CL:630
description: DNA polymerase complex, and Helix-hairpin-helix motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:630_DNA_polymerase_complex,_and_Helix-hairpin-helix_motif


id: CL:648
description: DNA topoisomerase, type IIA-like domain superfamily, and Regulation of DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:648_DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_Regulation_of_DNA_replication


id: CL:658
description: RNA-DNA hybrid ribonuclease activity, and tRNA endonuclease-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:658_RNA-DNA_hybrid_ribonuclease_activity,_and_tRNA_endonuclease-like_domain_superfamily


id: CL:668
description: Mixed, incl. AAA domain, and Regulation of response to stress
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:668_Mixed,_incl._AAA_domain,_and_Regulation_of_response_to_stress


id: CL:680
description: PD-(D/E)XK endonuclease-like domain, AddAB-type, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:680_PD-(D/E)XK_endonuclease-like_domain,_AddAB-type,_and_4Fe-4S_binding_domain


id: CL:697
description: Mixed, incl. Holliday junction helicase complex, and Queuosine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:697_Mixed,_incl._Holliday_junction_helicase_complex,_and_Queuosine_biosynthesis


id: CL:699
description: Holliday junction helicase complex, and Queuosine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:699_Holliday_junction_helicase_complex,_and_Queuosine_biosynthesis


id: CL:721
description: Mixed, incl. Nucleoside monophosphate metabolic process, and Pyrimidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:721_Mixed,_incl._Nucleoside_monophosphate_metabolic_process,_and_Pyrimidine_metabolism


id: CL:723
description: Nucleoside monophosphate metabolic process, and Pyrimidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:723_Nucleoside_monophosphate_metabolic_process,_and_Pyrimidine_metabolism


id: CL:724
description: Ribonucleoside monophosphate metabolic process, and Pyrimidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:724_Ribonucleoside_monophosphate_metabolic_process,_and_Pyrimidine_metabolism


id: CL:727
description: Ribonucleoside monophosphate metabolic process, and CBS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:727_Ribonucleoside_monophosphate_metabolic_process,_and_CBS_domain


id: CL:728
description: Purine biosynthesis, and Nucleotidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:728_Purine_biosynthesis,_and_Nucleotidase_activity


id: CL:732
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:732_De_novo_IMP_biosynthetic_process


id: CL:752
description: GMP biosynthesis, and Nucleotidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:752_GMP_biosynthesis,_and_Nucleotidase_activity


id: CL:76
description: Translation, and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:76_Translation,_and_Ribosome_biogenesis


id: CL:768
description: De novo UMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:768_De_novo_UMP_biosynthetic_process


id: CL:788
description: Mixed, incl. Purine salvage, and Purine nucleoside phosphorylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:788_Mixed,_incl._Purine_salvage,_and_Purine_nucleoside_phosphorylase


id: CL:790
description: Purine-nucleoside phosphorylase activity, and Adenine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:790_Purine-nucleoside_phosphorylase_activity,_and_Adenine_metabolic_process


id: CL:80
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:80_Ribosome,_and_Regulation_of_translation


id: CL:81
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:81_Ribosome,_and_Regulation_of_translation


id: CL:815
description: Mixed, incl. Deoxyribonucleotide biosynthetic process, and Chromate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:815_Mixed,_incl._Deoxyribonucleotide_biosynthetic_process,_and_Chromate_transport


id: CL:816
description: Mixed, incl. Chromate transport, and Peptidyl-glutamine methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:816_Mixed,_incl._Chromate_transport,_and_Peptidyl-glutamine_methylation


id: CL:817
description: Mixed, incl. Telomere recombination, and Suppression of apoptosis
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:817_Mixed,_incl._Telomere_recombination,_and_Suppression_of_apoptosis


id: CL:82
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:82_Ribosome,_and_Regulation_of_translation


id: CL:83
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:83_Ribosome,_and_Regulation_of_translation


id: CL:830
description: Chromate transport, and Peptidyl-glutamine methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:830_Chromate_transport,_and_Peptidyl-glutamine_methylation


id: CL:840
description: Deoxyribonucleotide biosynthetic process, and Nucleobase-containing compound kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:840_Deoxyribonucleotide_biosynthetic_process,_and_Nucleobase-containing_compound_kinase_activity


id: CL:86
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:86_Ribosome,_and_Regulation_of_translation


id: CL:862
description: Mixed, incl. MerR-type HTH domain, and RNA polymerase sigma-70
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:862_Mixed,_incl._MerR-type_HTH_domain,_and_RNA_polymerase_sigma-70


id: CL:864
description: RNA polymerase sigma-70, and CarD-like/TRCF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:864_RNA_polymerase_sigma-70,_and_CarD-like/TRCF_domain


id: CL:874
description: Mixed, incl. dGTP catabolic process, and tRNA (adenine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:874_Mixed,_incl._dGTP_catabolic_process,_and_tRNA_(adenine)_methyltransferase_activity


id: CL:89
description: Ribosome, and Translational elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:89_Ribosome,_and_Translational_elongation


id: CL:890
description: Mixed, incl. Isopentenyl diphosphate metabolic process, and UVR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:890_Mixed,_incl._Isopentenyl_diphosphate_metabolic_process,_and_UVR_domain


id: CL:891
description: Mixed, incl. Isopentenyl diphosphate metabolic process, and Sodium ion transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:891_Mixed,_incl._Isopentenyl_diphosphate_metabolic_process,_and_Sodium_ion_transmembrane_transport


id: CL:893
description: Isopentenyl diphosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:893_Isopentenyl_diphosphate_metabolic_process


id: CL:907
description: Mixed, incl. Ribonuclease III domain, and Transcription regulator LuxR, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:907_Mixed,_incl._Ribonuclease_III_domain,_and_Transcription_regulator_LuxR,_C-terminal


id: CL:917
description: Mixed, incl. UVR domain, and Helix-hairpin-helix motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:917_Mixed,_incl._UVR_domain,_and_Helix-hairpin-helix_motif


id: CL:93
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:93_Structural_constituent_of_ribosome


id: CL:932
description: Mixed, incl. Formamide metabolic process, and One-carbon metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:932_Mixed,_incl._Formamide_metabolic_process,_and_One-carbon_metabolic_process


id: CL:933
description: Mixed, incl. DNA catabolic process, and Alkaline shock protein Asp23
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:933_Mixed,_incl._DNA_catabolic_process,_and_Alkaline_shock_protein_Asp23


id: CL:936
description: Mixed, incl. DNA catabolic process, and NusB family
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:936_Mixed,_incl._DNA_catabolic_process,_and_NusB_family


id: CL:94
description: Structural constituent of ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:94_Structural_constituent_of_ribosome,_and_Translation_regulator_activity


id: CL:951
description: Mixed, incl. Host cell, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:951_Mixed,_incl._Host_cell,_and_AAA_domain


id: CL:963
description: Formamide metabolic process, and One-carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:963_Formamide_metabolic_process,_and_One-carbon_metabolism


id: CL:978
description: Mixed, incl. Cell division, and Phenylalanine, tyrosine and tryptophan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:978_Mixed,_incl._Cell_division,_and_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis


id: CL:979
description: Mixed, incl. Cell division, and Phenylalanine, tyrosine and tryptophan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:979_Mixed,_incl._Cell_division,_and_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis


id: CL:98
description: rRNA-binding, and 50S ribosomal protein L30e-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:98_rRNA-binding,_and_50S_ribosomal_protein_L30e-like


id: CL:980
description: Mixed, incl. Cell division, and Regulation of cell shape
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:980_Mixed,_incl._Cell_division,_and_Regulation_of_cell_shape


id: CL:981
description: Cell division, and Liposaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:981_Cell_division,_and_Liposaccharide_metabolic_process


id: CL:983
description: Mixed, incl. Cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:983_Mixed,_incl._Cell_shape,_and_Cell_division_site


id: CL:985
description: Cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:985_Cell_shape,_and_Cell_division_site


id: CL:986
description: Cell shape, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:986_Cell_shape,_and_Cell_division_site


id: CL:990
description: Mur ligase, C-terminal domain superfamily, and D-Alanine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1147123_STRINGid_CL:990_Mur_ligase,_C-terminal_domain_superfamily,_and_D-Alanine_metabolism


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 10
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000724
description: Double-strand break repair via homologous recombination
memo: https://amigo.geneontology.org/amigo/term/GO:0000724
golevel: 9
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0000724_Double-strand_break_repair_via_homologous_recombination


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0002926
description: tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation
memo: https://amigo.geneontology.org/amigo/term/GO:0002926
golevel: 13
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0002926_tRNA_wobble_base_5-methoxycarbonylmethyl-2-thiouridinylation


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003864
description: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003864
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0003864_3-methyl-2-oxobutanoate_hydroxymethyltransferase_activity


id: GO:0003882
description: CDP-diacylglycerol-serine O-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003882
golevel: 6
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0003882_CDP-diacylglycerol-serine_O-phosphatidyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 6
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0003992
description: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003992
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0003992_N2-acetyl-L-ornithine:2-oxoglutarate_5-aminotransferase_activity


id: GO:0004015
description: adenosylmethionine-8-amino-7-oxononanoate transaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004015
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0004015_adenosylmethionine-8-amino-7-oxononanoate_transaminase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
golevel: 6
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004471
description: Malate dehydrogenase (decarboxylating) (NAD+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004471
golevel: 6
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0004471_Malate_dehydrogenase_(decarboxylating)_(NAD+)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 6
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004715
description: Non-membrane spanning protein tyrosine kinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004715
golevel: 7
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0004715_Non-membrane_spanning_protein_tyrosine_kinase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0005315
description: Inorganic phosphate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005315
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0005315_Inorganic_phosphate_transmembrane_transporter_activity


id: GO:0005350
description: Pyrimidine nucleobase transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005350
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0005350_Pyrimidine_nucleobase_transmembrane_transporter_activity


id: GO:0005477
description: Pyruvate secondary active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005477
golevel: 7
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0005477_Pyruvate_secondary_active_transmembrane_transporter_activity


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 11
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0006620
description: Post-translational protein targeting to endoplasmic reticulum membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006620
golevel: 10
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0006620_Post-translational_protein_targeting_to_endoplasmic_reticulum_membrane


id: GO:0008028
description: Monocarboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008028
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0008028_Monocarboxylic_acid_transmembrane_transporter_activity


id: GO:0008108
description: UDP-glucose:hexose-1-phosphate uridylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008108
golevel: 6
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0008108_UDP-glucose:hexose-1-phosphate_uridylyltransferase_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 7
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008686
description: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008686
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0008686_3,4-dihydroxy-2-butanone-4-phosphate_synthase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
golevel: 6
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008817
description: cob(I)yrinic acid a,c-diamide adenosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008817
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0008817_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008939
description: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008939
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0008939_Nicotinate-nucleotide-dimethylbenzimidazole_phosphoribosyltransferase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0008965
description: Phosphoenolpyruvate-protein phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008965
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0008965_Phosphoenolpyruvate-protein_phosphotransferase_activity


id: GO:0008982
description: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008982
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0008982_protein-N(PI)-phosphohistidine-sugar_phosphotransferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 6
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 9
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009139
description: Pyrimidine nucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009139
golevel: 9
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0009139_Pyrimidine_nucleoside_diphosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 9
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009157
description: Deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009157
golevel: 9
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0009157_Deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 10
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 9
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 10
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009175
description: Pyrimidine ribonucleoside monophosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009175
golevel: 10
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0009175_Pyrimidine_ribonucleoside_monophosphate_catabolic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 9
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 10
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 9
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 10
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 10
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 9
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 10
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009210
description: Pyrimidine ribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009210
golevel: 10
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0009210_Pyrimidine_ribonucleoside_triphosphate_catabolic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 9
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 10
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 10
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 9
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 10
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009401
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system
memo: https://amigo.geneontology.org/amigo/term/GO:0009401
golevel: 8
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0009401_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 6
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 6
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 6
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0010604
description: Positive regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010604
golevel: 5
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0010604_Positive_regulation_of_macromolecule_metabolic_process


id: GO:0010605
description: Negative regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010605
golevel: 5
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0010605_Negative_regulation_of_macromolecule_metabolic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
golevel: 3
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015355
description: Secondary active monocarboxylate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015355
golevel: 6
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0015355_Secondary_active_monocarboxylate_transmembrane_transporter_activity


id: GO:0015415
description: ATPase-coupled phosphate ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015415
golevel: 7
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0015415_ATPase-coupled_phosphate_ion_transmembrane_transporter_activity


id: GO:0015451
description: Decarboxylation-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015451
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0015451_Decarboxylation-driven_active_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015658
description: Branched-chain amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015658
golevel: 6
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0015658_Branched-chain_amino_acid_transmembrane_transporter_activity


id: GO:0015667
description: Site-specific DNA-methyltransferase (cytosine-N4-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015667
golevel: 6
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0015667_Site-specific_DNA-methyltransferase_(cytosine-N4-specific)_activity


id: GO:0015975
description: Energy derivation by oxidation of reduced inorganic compounds
memo: https://amigo.geneontology.org/amigo/term/GO:0015975
golevel: 4
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0015975_Energy_derivation_by_oxidation_of_reduced_inorganic_compounds


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016625
memo: https://amigo.geneontology.org/amigo/term/GO:0016625
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016625_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_iron-sulfur_protein_as_acceptor

description:
  Oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016641
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016641
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016641_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_oxygen_as_acceptor


id: GO:0016642
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016642
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016642_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_disulfide_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016647
description: Oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016647
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016647_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_oxygen_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016699
description: Oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016699
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016699_Oxidoreductase_activity,_acting_on_hydrogen_as_donor,_iron-sulfur_protein_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016703
memo: https://amigo.geneontology.org/amigo/term/GO:0016703
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016703_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_one_atom_of_oxygen_(internal_monooxygenases_or_internal_mixed_function_oxidases)

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)


id: GO:0016721
description: Oxidoreductase activity, acting on superoxide radicals as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016721
golevel: 3
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016721_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016773
description: Phosphotransferase activity, alcohol group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016773
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016773_Phosphotransferase_activity,_alcohol_group_as_acceptor


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
golevel: 6
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016822
description: Hydrolase activity, acting on acid carbon-carbon bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016822
golevel: 3
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016822_Hydrolase_activity,_acting_on_acid_carbon-carbon_bonds


id: GO:0016823
description: Hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances
memo: https://amigo.geneontology.org/amigo/term/GO:0016823
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016823_Hydrolase_activity,_acting_on_acid_carbon-carbon_bonds,_in_ketonic_substances


id: GO:0016837
description: Carbon-oxygen lyase activity, acting on polysaccharides
memo: https://amigo.geneontology.org/amigo/term/GO:0016837
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016837_Carbon-oxygen_lyase_activity,_acting_on_polysaccharides


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016856
description: Racemase and epimerase activity, acting on hydroxy acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016856
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016856_Racemase_and_epimerase_activity,_acting_on_hydroxy_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016869
description: Intramolecular transferase activity, transferring amino groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016869
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016869_Intramolecular_transferase_activity,_transferring_amino_groups


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016888
description: Endodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016888
golevel: 7
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016888_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016889
description: Endodeoxyribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016889
golevel: 7
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016889_Endodeoxyribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 7
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
golevel: 6
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016894
memo: https://amigo.geneontology.org/amigo/term/GO:0016894
golevel: 6
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016894_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_3-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 7
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016896
description: Exoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016896
golevel: 7
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016896_Exoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0018339
description: peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid
memo: https://amigo.geneontology.org/amigo/term/GO:0018339
golevel: 8
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0018339_peptidyl-L-beta-methylthioaspartic_acid_biosynthetic_process_from_peptidyl-aspartic_acid


id: GO:0019171
description: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019171
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0019171_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 5
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019288
description: Isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019288
golevel: 8
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0019288_Isopentenyl_diphosphate_biosynthetic_process,_methylerythritol_4-phosphate_pathway


id: GO:0019556
description: Histidine catabolic process to glutamate and formamide
memo: https://amigo.geneontology.org/amigo/term/GO:0019556
golevel: 10
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0019556_Histidine_catabolic_process_to_glutamate_and_formamide


id: GO:0019829
description: ATPase-coupled cation transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019829
golevel: 6
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0019829_ATPase-coupled_cation_transmembrane_transporter_activity


id: GO:0022872
memo: https://amigo.geneontology.org/amigo/term/GO:0022872
golevel: 6
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0022872_protein-N(PI)-phosphohistidine-mannitol_phosphotransferase_system_transmembrane_transporter_activity

description:
  protein-N(PI)-phosphohistidine-mannitol phosphotransferase system transmembrane transporter activity


id: GO:0022877
description: protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0022877
golevel: 8
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0022877_protein-N(PI)-phosphohistidine-fructose_phosphotransferase_system_transporter_activity


id: GO:0030435
description: Sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0030435
golevel: 3
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0030435_Sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0030604
description: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030604
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0030604_1-deoxy-D-xylulose-5-phosphate_reductoisomerase_activity


id: GO:0030698
description: 5,10-methylenetetrahydrofolate-dependent tRNA (m5U54) methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030698
golevel: 9
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0030698_5,10-methylenetetrahydrofolate-dependent_tRNA_(m5U54)_methyltransferase_activity


id: GO:0031234
description: Extrinsic component of cytoplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031234
golevel: 6
name:
  GOCC.STRING_v12.0_1147123_STRINGid_GO:0031234_Extrinsic_component_of_cytoplasmic_side_of_plasma_membrane


id: GO:0031235
description: Intrinsic component of the cytoplasmic side of the plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031235
name:
  GOCC.STRING_v12.0_1147123_STRINGid_GO:0031235_Intrinsic_component_of_the_cytoplasmic_side_of_the_plasma_membrane


id: GO:0031250
description: Anaerobic ribonucleoside-triphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031250
golevel: 4
name:
  GOCC.STRING_v12.0_1147123_STRINGid_GO:0031250_Anaerobic_ribonucleoside-triphosphate_reductase_complex


id: GO:0031554
description: Regulation of DNA-templated transcription, termination
memo: https://amigo.geneontology.org/amigo/term/GO:0031554
golevel: 11
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0031554_Regulation_of_DNA-templated_transcription,_termination


id: GO:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
golevel: 3
name:
  GOCC.STRING_v12.0_1147123_STRINGid_GO:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GO:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
golevel: 3
name:
  GOCC.STRING_v12.0_1147123_STRINGid_GO:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GO:0033283
description: ATPase-coupled organic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033283
golevel: 6
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0033283_ATPase-coupled_organic_acid_transmembrane_transporter_activity


id: GO:0033284
description: ATPase-coupled carboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033284
golevel: 7
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0033284_ATPase-coupled_carboxylic_acid_transmembrane_transporter_activity


id: GO:0033362
description: Lysine biosynthetic process via diaminopimelate, diaminopimelate-aminotransferase pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0033362
golevel: 12
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0033362_Lysine_biosynthetic_process_via_diaminopimelate,_diaminopimelate-aminotransferase_pathway


id: GO:0033744
description: L-methionine:thioredoxin-disulfide S-oxidoreductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033744
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0033744_L-methionine:thioredoxin-disulfide_S-oxidoreductase_activity


id: GO:0033818
description: Beta-ketoacyl-acyl-carrier-protein synthase III activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033818
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0033818_Beta-ketoacyl-acyl-carrier-protein_synthase_III_activity


id: GO:0034023
description: 5-(carboxyamino)imidazole ribonucleotide mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034023
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0034023_5-(carboxyamino)imidazole_ribonucleotide_mutase_activity


id: GO:0034036
description: Purine ribonucleoside bisphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034036
golevel: 10
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0034036_Purine_ribonucleoside_bisphosphate_biosynthetic_process


id: GO:0034249
description: Negative regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034249
golevel: 6
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0034249_Negative_regulation_of_cellular_amide_metabolic_process


id: GO:0034250
description: Positive regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034250
golevel: 6
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0034250_Positive_regulation_of_cellular_amide_metabolic_process


id: GO:0034404
description: Nucleobase-containing small molecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034404
golevel: 6
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0034404_Nucleobase-containing_small_molecule_biosynthetic_process


id: GO:0034656
description: Nucleobase-containing small molecule catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034656
golevel: 6
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0034656_Nucleobase-containing_small_molecule_catabolic_process


id: GO:0035592
description: Establishment of protein localization to extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0035592
golevel: 6
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0035592_Establishment_of_protein_localization_to_extracellular_region


id: GO:0035598
description: N6-threonylcarbomyladenosine methylthiotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0035598
golevel: 6
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0035598_N6-threonylcarbomyladenosine_methylthiotransferase_activity


id: GO:0035998
description: 7,8-dihydroneopterin 3-triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0035998
golevel: 6
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0035998_7,8-dihydroneopterin_3-triphosphate_biosynthetic_process


id: GO:0036361
description: Racemase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0036361
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0036361_Racemase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0036381
description: Pyridoxal 5-phosphate synthase (glutamine hydrolysing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0036381
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0036381_Pyridoxal_5-phosphate_synthase_(glutamine_hydrolysing)_activity


id: GO:0042083
description: 5,10-methylenetetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042083
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0042083_5,10-methylenetetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042084
description: 5-methyltetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042084
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0042084_5-methyltetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042173
description: Regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042173
golevel: 6
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0042173_Regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0042174
description: Negative regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042174
golevel: 7
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0042174_Negative_regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0042777
description: Proton motive force-driven plasma membrane ATP synthesis
memo: https://amigo.geneontology.org/amigo/term/GO:0042777
golevel: 13
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0042777_Proton_motive_force-driven_plasma_membrane_ATP_synthesis


id: GO:0043225
description: ATPase-coupled inorganic anion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043225
golevel: 6
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0043225_ATPase-coupled_inorganic_anion_transmembrane_transporter_activity


id: GO:0043365
description: [formate-C-acetyltransferase]-activating enzyme activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043365
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0043365_[formate-C-acetyltransferase]-activating_enzyme_activity


id: GO:0043811
description: Phosphate:acyl-[acyl carrier protein] acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043811
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0043811_Phosphate:acyl-[acyl_carrier_protein]_acyltransferase_activity


id: GO:0044419
description: Biological process involved in interspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0044419
golevel: 1
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0044419_Biological_process_involved_in_interspecies_interaction_between_organisms


id: GO:0044769
description: ATPase activity, coupled to transmembrane movement of ions, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0044769
golevel: 7
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0044769_ATPase_activity,_coupled_to_transmembrane_movement_of_ions,_rotational_mechanism


id: GO:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
golevel: 6
name:
  GOCC.STRING_v12.0_1147123_STRINGid_GO:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GO:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
golevel: 6
name:
  GOCC.STRING_v12.0_1147123_STRINGid_GO:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GO:0045717
description: Negative regulation of fatty acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045717
golevel: 10
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0045717_Negative_regulation_of_fatty_acid_biosynthetic_process


id: GO:0045881
description: Positive regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0045881
golevel: 7
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0045881_Positive_regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0045934
description: Negative regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045934
golevel: 6
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0045934_Negative_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0045935
description: Positive regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045935
golevel: 6
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0045935_Positive_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0046429
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046429
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0046429_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_synthase_activity


id: GO:0046537
description: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046537
golevel: 6
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0046537_2,3-bisphosphoglycerate-independent_phosphoglycerate_mutase_activity


id: GO:0046912
description: Acyltransferase activity, acyl groups converted into alkyl on transfer
memo: https://amigo.geneontology.org/amigo/term/GO:0046912
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0046912_Acyltransferase_activity,_acyl_groups_converted_into_alkyl_on_transfer


id: GO:0046915
description: Transition metal ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046915
golevel: 6
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0046915_Transition_metal_ion_transmembrane_transporter_activity


id: GO:0046933
description: Proton-transporting ATP synthase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046933
golevel: 8
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0046933_Proton-transporting_ATP_synthase_activity,_rotational_mechanism


id: GO:0046961
description: Proton-transporting ATPase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046961
golevel: 8
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0046961_Proton-transporting_ATPase_activity,_rotational_mechanism


id: GO:0046992
description: Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond
memo: https://amigo.geneontology.org/amigo/term/GO:0046992
golevel: 3
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0046992_Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond


id: GO:0047151
description: methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase (FADH2-oxidizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047151
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0047151_methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase_(FADH2-oxidizing)_activity


id: GO:0047334
description: diphosphate-fructose-6-phosphate 1-phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047334
golevel: 7
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0047334_diphosphate-fructose-6-phosphate_1-phosphotransferase_activity


id: GO:0047451
description: 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047451
golevel: 6
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0047451_3-hydroxyoctanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0047480
description: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047480
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0047480_UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine_ligase_activity


id: GO:0048646
description: Anatomical structure formation involved in morphogenesis
memo: https://amigo.geneontology.org/amigo/term/GO:0048646
golevel: 2
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0048646_Anatomical_structure_formation_involved_in_morphogenesis


id: GO:0050485
description: Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0050485
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0050485_Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond,_with_a_disulfide_as_acceptor


id: GO:0050511
description: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050511
golevel: 6
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0050511_Undecaprenyldiphospho-muramoylpentapeptide_beta-N-acetylglucosaminyltransferase_activity


id: GO:0050515
description: 4-(cytidine 5-diphospho)-2-C-methyl-D-erythritol kinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050515
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0050515_4-(cytidine_5-diphospho)-2-C-methyl-D-erythritol_kinase_activity


id: GO:0050518
description: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050518
golevel: 6
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0050518_2-C-methyl-D-erythritol_4-phosphate_cytidylyltransferase_activity


id: GO:0050567
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050567
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0050567_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0051003
description: Ligase activity, forming nitrogen-metal bonds, forming coordination complexes
memo: https://amigo.geneontology.org/amigo/term/GO:0051003
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0051003_Ligase_activity,_forming_nitrogen-metal_bonds,_forming_coordination_complexes


id: GO:0051075
description: S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051075
golevel: 3
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0051075_S-adenosylmethionine:tRNA_ribosyltransferase-isomerase_activity


id: GO:0051172
description: Negative regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051172
golevel: 5
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0051172_Negative_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051173
description: Positive regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051173
golevel: 5
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0051173_Positive_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051240
description: Positive regulation of multicellular organismal process
memo: https://amigo.geneontology.org/amigo/term/GO:0051240
golevel: 4
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0051240_Positive_regulation_of_multicellular_organismal_process


id: GO:0051745
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051745
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0051745_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_reductase_activity


id: GO:0051748
description: UTP-monosaccharide-1-phosphate uridylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051748
golevel: 6
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0051748_UTP-monosaccharide-1-phosphate_uridylyltransferase_activity


id: GO:0051991
memo: https://amigo.geneontology.org/amigo/term/GO:0051991
golevel: 6
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0051991_UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol_4-beta-N-acetylglucosaminlytransferase_activity

description:
  UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity


id: GO:0051992
memo: https://amigo.geneontology.org/amigo/term/GO:0051992
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0051992_UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate_transferase_activity

description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity


id: GO:0052592
description: Oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0052592
golevel: 4
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0052592_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_with_an_iron-sulfur_protein_as_acceptor


id: GO:0052908
description: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052908
golevel: 9
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0052908_16S_rRNA_(adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase_activity


id: GO:0052929
description: ATP:3-cytidine-cytidine-tRNA adenylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052929
golevel: 6
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0052929_ATP:3-cytidine-cytidine-tRNA_adenylyltransferase_activity


id: GO:0055052
description: ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing
memo: https://amigo.geneontology.org/amigo/term/GO:0055052
golevel: 7
name:
  GOCC.STRING_v12.0_1147123_STRINGid_GO:0055052_ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing


id: GO:0055086
description: Nucleobase-containing small molecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0055086
golevel: 3
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0055086_Nucleobase-containing_small_molecule_metabolic_process


id: GO:0061504
description: Cyclic threonylcarbamoyladenosine biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0061504
golevel: 11
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0061504_Cyclic_threonylcarbamoyladenosine_biosynthetic_process


id: GO:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
golevel: 4
name:
  GOCC.STRING_v12.0_1147123_STRINGid_GO:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GO:0062014
description: Negative regulation of small molecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0062014
golevel: 5
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0062014_Negative_regulation_of_small_molecule_metabolic_process


id: GO:0070626
memo: https://amigo.geneontology.org/amigo/term/GO:0070626
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0070626_(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)_succinate_lyase_(fumarate-forming)_activity

description:
  (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity


id: GO:0070647
description: Protein modification by small protein conjugation or removal
memo: https://amigo.geneontology.org/amigo/term/GO:0070647
golevel: 6
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0070647_Protein_modification_by_small_protein_conjugation_or_removal


id: GO:0071951
description: Conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
memo: https://amigo.geneontology.org/amigo/term/GO:0071951
golevel: 12
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0071951_Conversion_of_methionyl-tRNA_to_N-formyl-methionyl-tRNA


id: GO:0072531
description: Pyrimidine-containing compound transmembrane transport
memo: https://amigo.geneontology.org/amigo/term/GO:0072531
golevel: 5
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0072531_Pyrimidine-containing_compound_transmembrane_transport


id: GO:0072599
description: Establishment of protein localization to endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0072599
golevel: 7
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0072599_Establishment_of_protein_localization_to_endoplasmic_reticulum


id: GO:0090563
description: Protein-phosphocysteine-sugar phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0090563
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0090563_Protein-phosphocysteine-sugar_phosphotransferase_activity


id: GO:0097588
description: Archaeal or bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:0097588
golevel: 4
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0097588_Archaeal_or_bacterial-type_flagellum-dependent_cell_motility


id: GO:0102027
description: S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102027
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0102027_S-adenosylmethionine:2-demethylquinol-8_methyltransferase_activity


id: GO:0102094
description: S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102094
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0102094_S-adenosylmethionine:2-demethylmenaquinol_methyltransferase_activity


id: GO:0102481
description: 3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102481
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0102481_3D-(3,5/4)-trihydroxycyclohexane-1,2-dione_hydrolase_activity


id: GO:0102752
memo: https://amigo.geneontology.org/amigo/term/GO:0102752
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0102752_1,4-alpha-glucan_branching_enzyme_activity_(using_a_glucosylated_glycogenin_as_primer_for_glycogen_synthesis)

description:
  1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis)


id: GO:0102955
description: S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102955
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0102955_S-adenosylmethionine:2-demethylmenaquinol-7_methyltransferase_activity


id: GO:0106074
description: aminoacyl-tRNA metabolism involved in translational fidelity
memo: https://amigo.geneontology.org/amigo/term/GO:0106074
golevel: 9
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:0106074_aminoacyl-tRNA_metabolism_involved_in_translational_fidelity


id: GO:0140078
description: Class I DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0140078
golevel: 5
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:0140078_Class_I_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:1901505
description: Carbohydrate derivative transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901505
golevel: 3
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:1901505_Carbohydrate_derivative_transmembrane_transporter_activity


id: GO:1901618
description: Organic hydroxy compound transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901618
golevel: 3
name:
  GOMF.STRING_v12.0_1147123_STRINGid_GO:1901618_Organic_hydroxy_compound_transmembrane_transporter_activity


id: GO:1901800
description: Positive regulation of proteasomal protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1901800
golevel: 9
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:1901800_Positive_regulation_of_proteasomal_protein_catabolic_process


id: GO:1902021
description: Regulation of bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:1902021
golevel: 6
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:1902021_Regulation_of_bacterial-type_flagellum-dependent_cell_motility


id: GO:1903050
description: Regulation of proteolysis involved in protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1903050
golevel: 7
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:1903050_Regulation_of_proteolysis_involved_in_protein_catabolic_process


id: GO:1903052
description: Positive regulation of proteolysis involved in protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1903052
golevel: 8
name:
  GOBP.STRING_v12.0_1147123_STRINGid_GO:1903052_Positive_regulation_of_proteolysis_involved_in_protein_catabolic_process


