# geneInfo

ensembl_gene_id: SAMN02745119_00007
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: SAMN02745119_00014
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: SAMN02745119_00015
symbol: hisZ
gene_biotype: protein_coding
description:
  histidyl-tRNA synthetase; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: SAMN02745119_00025
symbol: trmFO
gene_biotype: protein_coding
description:
  methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: SAMN02745119_00026
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: SAMN02745119_00029
symbol: cpoB
gene_biotype: protein_coding
description:
  Tol-pal system protein YbgF; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.


ensembl_gene_id: SAMN02745119_00033
symbol: SJZ33080.1
gene_biotype: protein_coding
description:
  Primary replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: SAMN02745119_00038
symbol: flgI
gene_biotype: protein_coding
description:
  Flagellar P-ring protein precursor FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: SAMN02745119_00039
symbol: flgH
gene_biotype: protein_coding
description:
  Flagellar L-ring protein precursor FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: SAMN02745119_00040
symbol: SJZ33201.1
gene_biotype: protein_coding
description:
  Flagella basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.


ensembl_gene_id: SAMN02745119_00046
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: SAMN02745119_00047
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: SAMN02745119_00048
symbol: SJZ33398.1
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: SAMN02745119_00049
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: SAMN02745119_00050
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: SAMN02745119_00054
symbol: SJZ33496.1
gene_biotype: protein_coding
description:
  Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: SAMN02745119_00057
symbol: SJZ33542.1
gene_biotype: protein_coding
description:
  Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.


ensembl_gene_id: SAMN02745119_00064
symbol: SJZ33699.1
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: SAMN02745119_00067
symbol: SJZ33753.1
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: SAMN02745119_00083
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: SAMN02745119_00087
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: SAMN02745119_00095
symbol: SJZ34080.1
gene_biotype: protein_coding
description:
  L-threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde.


ensembl_gene_id: SAMN02745119_00103
symbol: SJZ34214.1
gene_biotype: protein_coding
description:
  Phosphopantothenate-cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: SAMN02745119_00140
symbol: nadE
gene_biotype: protein_coding
description:
  NH(3)-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.


ensembl_gene_id: SAMN02745119_00152
symbol: SJZ34906.1
gene_biotype: protein_coding
description:
  Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: SAMN02745119_00153
symbol: SJZ34916.1
gene_biotype: protein_coding
description:
  1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: SAMN02745119_00156
symbol: rnj
gene_biotype: protein_coding
description:
  Ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: SAMN02745119_00161
symbol: SJZ34961.1
gene_biotype: protein_coding
description:
  Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN02745119_00173
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: SAMN02745119_00180
symbol: pdxA
gene_biotype: protein_coding
description:
  4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).


ensembl_gene_id: SAMN02745119_00184
symbol: SJZ35306.1
gene_biotype: protein_coding
description:
  Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family.


ensembl_gene_id: SAMN02745119_00189
symbol: hypA
gene_biotype: protein_coding
description:
  Hydrogenase-3 nickel incorporation protein HypA; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.


ensembl_gene_id: SAMN02745119_00190
symbol: pckG
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase (GTP); Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family.


ensembl_gene_id: SAMN02745119_00193
symbol: SJZ35440.1
gene_biotype: protein_coding
description:
  Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN02745119_00195
symbol: SJZ35469.1
gene_biotype: protein_coding
description:
  RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN02745119_00197
symbol: pal
gene_biotype: protein_coding
description:
  Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: SAMN02745119_00198
symbol: tolB
gene_biotype: protein_coding
description:
  TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: SAMN02745119_00207
symbol: metXA
gene_biotype: protein_coding
description:
  Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.


ensembl_gene_id: SAMN02745119_00209
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: SAMN02745119_00240
symbol: smc
gene_biotype: protein_coding
description:
  Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: SAMN02745119_00242
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.


ensembl_gene_id: SAMN02745119_00248
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.


ensembl_gene_id: SAMN02745119_00262
symbol: SJZ36530.1
gene_biotype: protein_coding
description:
  Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor; Antitoxin component of a type II toxin-antitoxin (TA) system.


ensembl_gene_id: SAMN02745119_00282
symbol: SJZ36914.1
gene_biotype: protein_coding
description:
  Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: SAMN02745119_00287
symbol: SJZ37003.1
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: SAMN02745119_00295
symbol: cbiD
gene_biotype: protein_coding
description:
  cobalt-precorrin-5B (C1)-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.


ensembl_gene_id: SAMN02745119_00297
symbol: SJZ37245.1
gene_biotype: protein_coding
description:
  Sirohydrochlorin cobaltochelatase; Catalyzes the insertion of Co(2+) into sirohydrochlorin. Belongs to the CbiK family.


ensembl_gene_id: SAMN02745119_00299
symbol: cbiA
gene_biotype: protein_coding
description:
  Hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) /cobyrinate a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: SAMN02745119_00300
symbol: SJZ37308.1
gene_biotype: protein_coding
description:
  uroporphyrin-III C-methyltransferase / precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family.  In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family.


ensembl_gene_id: SAMN02745119_00301
symbol: SJZ37336.1
gene_biotype: protein_coding
description:
  Cobalt/nickel transport system ATP-binding protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.


ensembl_gene_id: SAMN02745119_00303
symbol: cbiN
gene_biotype: protein_coding
description:
  Cobalt/nickel transport protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import; Belongs to the CbiN family.


ensembl_gene_id: SAMN02745119_00304
symbol: cbiM
gene_biotype: protein_coding
description:
  Cobalt/nickel transport system permease protein; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import.


ensembl_gene_id: SAMN02745119_00308
symbol: metE
gene_biotype: protein_coding
description:
  Methionine synthase (B12-independent); Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.


ensembl_gene_id: SAMN02745119_00322
symbol: cobQ
gene_biotype: protein_coding
description:
  L-threonine O-3-phosphate decarboxylase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: SAMN02745119_00326
symbol: cobD
gene_biotype: protein_coding
description:
  Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: SAMN02745119_00328
symbol: hldD
gene_biotype: protein_coding
description:
  ADP-glyceromanno-heptose 6-epimerase precursor; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily.


ensembl_gene_id: SAMN02745119_00329
symbol: SJZ37698.1
gene_biotype: protein_coding
description:
  Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02745119_00333
symbol: SJZ37782.1
gene_biotype: protein_coding
description:
  Fumarate reductase flavoprotein subunit; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.


ensembl_gene_id: SAMN02745119_00334
symbol: SJZ37814.1
gene_biotype: protein_coding
description:
  Anaerobic C4-dicarboxylate transporter DcuB; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.


ensembl_gene_id: SAMN02745119_00352
symbol: nfo
gene_biotype: protein_coding
description:
  Endonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.


ensembl_gene_id: SAMN02745119_00353
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: SAMN02745119_00358
symbol: rplU
gene_biotype: protein_coding
description:
  LSU ribosomal protein L21P; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: SAMN02745119_00360
symbol: gpmI
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: SAMN02745119_00362
symbol: mtnA
gene_biotype: protein_coding
description:
  Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: SAMN02745119_00363
symbol: glnE
gene_biotype: protein_coding
description:
  Glutamate-ammonia-ligase adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transd [...]


ensembl_gene_id: SAMN02745119_00364
symbol: proA
gene_biotype: protein_coding
description:
  Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: SAMN02745119_00373
symbol: mtnP
gene_biotype: protein_coding
description:
  Methylthioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily.


ensembl_gene_id: SAMN02745119_00376
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA m(2)A-2503 methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: SAMN02745119_00377
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: SAMN02745119_00378
symbol: SJZ38361.1
gene_biotype: protein_coding
description:
  16S rRNA (cytosine967-C5)-methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: SAMN02745119_00389
symbol: macB
gene_biotype: protein_coding
description:
  Putative ABC transport system ATP-binding protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.


ensembl_gene_id: SAMN02745119_00390
symbol: rlmH
gene_biotype: protein_coding
description:
  23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: SAMN02745119_00391
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: SAMN02745119_00392
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: SAMN02745119_00397
symbol: mqnC
gene_biotype: protein_coding
description:
  De-hypoxanthine futalosine cyclase; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: SAMN02745119_00399
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.


ensembl_gene_id: SAMN02745119_00400
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: SAMN02745119_00401
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase trmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: SAMN02745119_00402
symbol: yidC
gene_biotype: protein_coding
description:
  Protein translocase subunit yidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: SAMN02745119_00403
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: SAMN02745119_00405
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: SAMN02745119_00406
symbol: SJZ38910.1
gene_biotype: protein_coding
description:
  DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...]


ensembl_gene_id: SAMN02745119_00407
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: SAMN02745119_00408
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN02745119_00410
symbol: rtcA
gene_biotype: protein_coding
description:
  RNA 3'-terminal phosphate cyclase (ATP); Catalyzes the conversion of 3'-phosphate to a 2',3'-cyclic phosphodiester at the end of RNA. The mechanism of action of the enzyme occurs in 3 steps: (A) adenylation of the enzyme by ATP; (B) transfer of adenylate to an RNA-N3'P to produce RNA-N3'PP5'A; (C) and attack of the adjacent 2'-hydroxyl on the 3'-phosphorus in the diester linkage to produce the cyclic end product. The biological role of this enzyme is unknown but it is likely to function in some aspects of cellular RNA processing.


ensembl_gene_id: SAMN02745119_00416
symbol: vapC
gene_biotype: protein_coding
description:
  Hypothetical protein; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.


ensembl_gene_id: SAMN02745119_00417
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN02745119_00419
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol 3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN02745119_00428
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: SAMN02745119_00429
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole-phosphate synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: SAMN02745119_00434
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: SAMN02745119_00451
symbol: argD
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase apoenzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: SAMN02745119_00461
symbol: SJZ39793.1
gene_biotype: protein_coding
description:
  Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family; Antitoxin component of a type II toxin-antitoxin (TA) system.


ensembl_gene_id: SAMN02745119_00542
symbol: SJZ41551.1
gene_biotype: protein_coding
description:
  Apolipoprotein D and lipocalin family protein; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids.


ensembl_gene_id: SAMN02745119_00543
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: SAMN02745119_00544
symbol: thiE-2
gene_biotype: protein_coding
description:
  Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: SAMN02745119_00546
symbol: recR
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: SAMN02745119_00547
symbol: SJZ41671.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: SAMN02745119_00548
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III, tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN02745119_00567
symbol: ahcY
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: SAMN02745119_00572
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: SAMN02745119_00573
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: SAMN02745119_00574
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: SAMN02745119_00575
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: SAMN02745119_00579
symbol: xerC
gene_biotype: protein_coding
description:
  Integrase/recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: SAMN02745119_00605
symbol: SJZ43072.1
gene_biotype: protein_coding
description:
  Thiol:disulfide interchange protein DsbC; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.


ensembl_gene_id: SAMN02745119_00671
symbol: SJZ45284.1
gene_biotype: protein_coding
description:
  Uncharacterized peroxidase-related enzyme; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: SAMN02745119_00675
symbol: SJZ45354.1
gene_biotype: protein_coding
description:
  Beta-ketoacyl synthase, N-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: SAMN02745119_00680
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: SAMN02745119_00696
symbol: prfB
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 2 (bRF-2); Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: SAMN02745119_00702
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: SAMN02745119_00704
symbol: ybeY
gene_biotype: protein_coding
description:
  Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: SAMN02745119_00708
symbol: SJZ48259.1
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: SAMN02745119_00709
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: SAMN02745119_00715
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase (ADP-forming) alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: SAMN02745119_00716
symbol: sucC
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase (ADP-forming) beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: SAMN02745119_00719
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: SAMN02745119_00721
symbol: SJZ48630.1
gene_biotype: protein_coding
description:
  Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: SAMN02745119_00722
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: SAMN02745119_00724
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: SAMN02745119_00730
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: SAMN02745119_00731
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: SAMN02745119_00734
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase subunit II; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to [...]


ensembl_gene_id: SAMN02745119_00741
symbol: xerD
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerD subunit; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: SAMN02745119_00742
symbol: glnD
gene_biotype: protein_coding
description:
  UTP--GlnB (protein PII) uridylyltransferase, GlnD; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.


ensembl_gene_id: SAMN02745119_00743
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium transporter; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: SAMN02745119_00744
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: SAMN02745119_00756
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: SAMN02745119_00760
symbol: lexA
gene_biotype: protein_coding
description:
  SOS-response transcriptional repressor, LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: SAMN02745119_00761
symbol: nadK
gene_biotype: protein_coding
description:
  NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: SAMN02745119_00768
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: SAMN02745119_00769
symbol: gcvPA
gene_biotype: protein_coding
description:
  Glycine dehydrogenase (decarboxylating) alpha subunit; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: SAMN02745119_00771
symbol: cmoB
gene_biotype: protein_coding
description:
  tRNA (mo5U34)-methyltransferase; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs.


ensembl_gene_id: SAMN02745119_00772
symbol: cmoA
gene_biotype: protein_coding
description:
  tRNA (cmo5U34)-methyltransferase; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM).


ensembl_gene_id: SAMN02745119_00774
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoic acid synthetase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: SAMN02745119_00781
symbol: SJZ50003.1
gene_biotype: protein_coding
description:
  neurotransmitter:Na+ symporter, NSS family; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.


ensembl_gene_id: SAMN02745119_00784
symbol: SJZ50069.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains.


ensembl_gene_id: SAMN02745119_00785
symbol: SJZ50093.1
gene_biotype: protein_coding
description:
  ABC-type transporter Mla maintaining outer membrane lipid asymmetry, MlaB component, contains STAS domain.


ensembl_gene_id: SAMN02745119_00789
symbol: SJZ50195.1
gene_biotype: protein_coding
description:
  MCP methyltransferase, CheR-type; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.


ensembl_gene_id: SAMN02745119_00792
symbol: cheB
gene_biotype: protein_coding
description:
  Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: SAMN02745119_00794
symbol: SJZ50298.1
gene_biotype: protein_coding
description:
  DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: SAMN02745119_00799
symbol: SJZ50407.1
gene_biotype: protein_coding
description:
  PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein/hemerythrin-like metal-binding domain protein.


ensembl_gene_id: SAMN02745119_00813
symbol: SJZ50692.1
gene_biotype: protein_coding
description:
  Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family.


ensembl_gene_id: SAMN02745119_00815
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: SAMN02745119_00820
symbol: rpsR
gene_biotype: protein_coding
description:
  SSU ribosomal protein S18P; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: SAMN02745119_00832
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: SAMN02745119_00833
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: SAMN02745119_00834
symbol: rplY
gene_biotype: protein_coding
description:
  LSU ribosomal protein L25P; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: SAMN02745119_00835
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: SAMN02745119_00836
symbol: ychF
gene_biotype: protein_coding
description:
  Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: SAMN02745119_00844
symbol: SJZ51348.1
gene_biotype: protein_coding
description:
  Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: SAMN02745119_00853
symbol: SJZ51563.1
gene_biotype: protein_coding
description:
  Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN02745119_00887
symbol: surE
gene_biotype: protein_coding
description:
  5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: SAMN02745119_00888
symbol: pcm
gene_biotype: protein_coding
description:
  protein-L-isoaspartate(D-aspartate) O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.


ensembl_gene_id: SAMN02745119_00889
symbol: SJZ53717.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 38 subunit, RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02745119_00890
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: SAMN02745119_00894
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: SAMN02745119_00901
symbol: SJZ54110.1
gene_biotype: protein_coding
description:
  Formate-dependent nitrite reductase, cytochrome c552 subunit; Belongs to the cytochrome c-552 family.


ensembl_gene_id: SAMN02745119_00908
symbol: napD
gene_biotype: protein_coding
description:
  Periplasmic nitrate reductase chaperone NapD; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.


ensembl_gene_id: SAMN02745119_00909
symbol: napA
gene_biotype: protein_coding
description:
  Periplasmic nitrate reductase subunit NapA apoprotein; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.


ensembl_gene_id: SAMN02745119_00915
symbol: SJZ54612.1
gene_biotype: protein_coding
description:
  Respiratory nitrite reductase (cytochrome ammonia-forming) precursor; Belongs to the cytochrome c-552 family.


ensembl_gene_id: SAMN02745119_00925
symbol: prmC
gene_biotype: protein_coding
description:
  [protein release factor]-glutamine N5-methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: SAMN02745119_00926
symbol: prfA
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 1 (bRF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: SAMN02745119_00928
symbol: thyX
gene_biotype: protein_coding
description:
  Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: SAMN02745119_00930
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: SAMN02745119_00935
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit hisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: SAMN02745119_00936
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.


ensembl_gene_id: SAMN02745119_00937
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit hisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: SAMN02745119_00941
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: SAMN02745119_00942
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: SAMN02745119_00944
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: SAMN02745119_00945
symbol: obg
gene_biotype: protein_coding
description:
  GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: SAMN02745119_00959
symbol: SJZ55882.1
gene_biotype: protein_coding
description:
  Adenosine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism.


ensembl_gene_id: SAMN02745119_00965
symbol: SJZ56016.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: SAMN02745119_00966
symbol: prmA
gene_biotype: protein_coding
description:
  [LSU ribosomal protein L11P]-lysine N-methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: SAMN02745119_00967
symbol: SJZ56050.1
gene_biotype: protein_coding
description:
  16S rRNA (uracil1498-N3)-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: SAMN02745119_00969
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: SAMN02745119_00970
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: SAMN02745119_00971
symbol: hfq
gene_biotype: protein_coding
description:
  RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: SAMN02745119_00974
symbol: SJZ56228.1
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: SAMN02745119_00979
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II Aspartic peptidase. MEROPS family A08; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: SAMN02745119_00980
symbol: ileS
gene_biotype: protein_coding
description:
  Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: SAMN02745119_00983
symbol: gmhA
gene_biotype: protein_coding
description:
  Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.


ensembl_gene_id: SAMN02745119_00984
symbol: hldE
gene_biotype: protein_coding
description:
  D-beta-D-heptose 1-phosphate adenylyltransferase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: SAMN02745119_00996
symbol: panC
gene_biotype: protein_coding
description:
  Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: SAMN02745119_00997
symbol: panB
gene_biotype: protein_coding
description:
  Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: SAMN02745119_01003
symbol: crcB
gene_biotype: protein_coding
description:
  Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: SAMN02745119_01019
symbol: gluQ
gene_biotype: protein_coding
description:
  glutamyl-Q tRNA(Asp) synthetase; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily.


ensembl_gene_id: SAMN02745119_01025
symbol: ribBA
gene_biotype: protein_coding
description:
  GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: SAMN02745119_01027
symbol: SJZ57477.1
gene_biotype: protein_coding
description:
  tRNA nucleotidyltransferase (CCA-adding enzyme); Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: SAMN02745119_01032
symbol: selA
gene_biotype: protein_coding
description:
  L-seryl-tRNA(Sec) selenium transferase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.


ensembl_gene_id: SAMN02745119_01033
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: SAMN02745119_01051
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: SAMN02745119_01057
symbol: kdpA
gene_biotype: protein_coding
description:
  K+-transporting ATPase ATPase A chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane.


ensembl_gene_id: SAMN02745119_01058
symbol: kdpB
gene_biotype: protein_coding
description:
  K+-transporting ATPase ATPase B chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily.


ensembl_gene_id: SAMN02745119_01059
symbol: kdpC
gene_biotype: protein_coding
description:
  K+-transporting ATPase ATPase C chain; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.


ensembl_gene_id: SAMN02745119_01064
symbol: kup
gene_biotype: protein_coding
description:
  KUP system potassium uptake protein; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family.


ensembl_gene_id: SAMN02745119_01069
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: SAMN02745119_01070
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: SAMN02745119_01073
symbol: SJZ59895.1
gene_biotype: protein_coding
description:
  Lipopolysaccharide biosynthesis regulator YciM, contains six TPR domains and a predicted metal-binding C-terminal domain.


ensembl_gene_id: SAMN02745119_01076
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: SAMN02745119_01097
symbol: rimO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: SAMN02745119_01099
symbol: SJZ60787.1
gene_biotype: protein_coding
description:
  Outer membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: SAMN02745119_01102
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: SAMN02745119_01103
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: SAMN02745119_01104
symbol: gatC
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: SAMN02745119_01105
symbol: rplM
gene_biotype: protein_coding
description:
  LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: SAMN02745119_01108
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: SAMN02745119_01121
symbol: atpF
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: SAMN02745119_01123
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN02745119_01124
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: SAMN02745119_01125
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: SAMN02745119_01126
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: SAMN02745119_01127
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase F1 subcomplex epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: SAMN02745119_01129
symbol: tatA
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: SAMN02745119_01131
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: SAMN02745119_01134
symbol: recA
gene_biotype: protein_coding
description:
  Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: SAMN02745119_01137
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: SAMN02745119_01139
symbol: argB
gene_biotype: protein_coding
description:
  N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: SAMN02745119_01142
symbol: SJZ61684.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: SAMN02745119_01148
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN02745119_01149
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0 subcomplex A subunit; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: SAMN02745119_01153
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: SAMN02745119_01154
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN02745119_01155
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: SAMN02745119_01156
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: SAMN02745119_01160
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: SAMN02745119_01161
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN02745119_01162
symbol: SJZ62060.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN02745119_01163
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: SAMN02745119_01166
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: SAMN02745119_01188
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA-adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN02745119_01202
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: SAMN02745119_01214
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: SAMN02745119_01220
symbol: efp
gene_biotype: protein_coding
description:
  Translation initiation factor 5A precursor (eIF-5A); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: SAMN02745119_01222
symbol: SJZ64448.1
gene_biotype: protein_coding
description:
  Dinuclear metal center protein, YbgI/SA1388 family; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.


ensembl_gene_id: SAMN02745119_01231
symbol: mqnE
gene_biotype: protein_coding
description:
  Aminodeoxyfutalosine synthase; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate.


ensembl_gene_id: SAMN02745119_01235
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: SAMN02745119_01271
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).


ensembl_gene_id: SAMN02745119_01277
symbol: vapC-2
gene_biotype: protein_coding
description:
  Predicted nucleic-acid-binding protein, contains PIN domain; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.


ensembl_gene_id: SAMN02745119_01278
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: SAMN02745119_01300
symbol: purE
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: SAMN02745119_01301
symbol: SJZ66483.1
gene_biotype: protein_coding
description:
  Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.


ensembl_gene_id: SAMN02745119_01321
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: SAMN02745119_01323
symbol: SJZ67078.1
gene_biotype: protein_coding
description:
  Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.


ensembl_gene_id: SAMN02745119_01333
symbol: folD
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: SAMN02745119_01338
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: SAMN02745119_01339
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: SAMN02745119_01340
symbol: SJZ67402.1
gene_biotype: protein_coding
description:
  uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: SAMN02745119_01349
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: SAMN02745119_01356
symbol: SJZ67780.1
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: SAMN02745119_01360
symbol: SJZ67925.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: SAMN02745119_01363
symbol: fcl
gene_biotype: protein_coding
description:
  GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.


ensembl_gene_id: SAMN02745119_01383
symbol: gmd
gene_biotype: protein_coding
description:
  GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.


ensembl_gene_id: SAMN02745119_01398
symbol: SJZ70301.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: SAMN02745119_01400
symbol: thiE-3
gene_biotype: protein_coding
description:
  Thiamine-phosphate synthase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: SAMN02745119_01401
symbol: thiC
gene_biotype: protein_coding
description:
  Hydroxymethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.


ensembl_gene_id: SAMN02745119_01402
symbol: SJZ70358.1
gene_biotype: protein_coding
description:
  Transcriptional regulator, CopG family; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family.


ensembl_gene_id: SAMN02745119_01403
symbol: SJZ70374.1
gene_biotype: protein_coding
description:
  Outer membrane transport energization protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.


ensembl_gene_id: SAMN02745119_01421
symbol: mutS2
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: SAMN02745119_01423
symbol: SJZ71036.1
gene_biotype: protein_coding
description:
  Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E.


ensembl_gene_id: SAMN02745119_01426
symbol: SJZ71192.1
gene_biotype: protein_coding
description:
  tRNA-U20-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: SAMN02745119_01429
symbol: SJZ71267.1
gene_biotype: protein_coding
description:
  NAD(P)-dependent nickel-iron dehydrogenase catalytic subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.


ensembl_gene_id: SAMN02745119_01445
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: SAMN02745119_01452
symbol: SJZ72044.1
gene_biotype: protein_coding
description:
  Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.


ensembl_gene_id: SAMN02745119_01453
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-phosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: SAMN02745119_01454
symbol: lon-2
gene_biotype: protein_coding
description:
  ATP-dependent proteinase. Serine peptidase. MEROPS family S16; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: SAMN02745119_01458
symbol: priA
gene_biotype: protein_coding
description:
  Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: SAMN02745119_01468
symbol: prfC
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 3 (bRF-3); Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: SAMN02745119_01471
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: SAMN02745119_01480
symbol: SJZ73011.1
gene_biotype: protein_coding
description:
  Chromosome partitioning ATPase, Mrp family, contains Fe-S cluster; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: SAMN02745119_01519
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: SAMN02745119_01520
symbol: grpE
gene_biotype: protein_coding
description:
  Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...]


ensembl_gene_id: SAMN02745119_01522
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: SAMN02745119_01535
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: SAMN02745119_01538
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: SAMN02745119_01544
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: SAMN02745119_01555
symbol: nnrE
gene_biotype: protein_coding
description:
  NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of bot [...]


ensembl_gene_id: SAMN02745119_01556
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-[acyl-carrier protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: SAMN02745119_01557
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: SAMN02745119_01558
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: SAMN02745119_01559
symbol: dacA
gene_biotype: protein_coding
description:
  TIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: SAMN02745119_01561
symbol: ftsH
gene_biotype: protein_coding
description:
  Membrane protease FtsH catalytic subunit; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: SAMN02745119_01562
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: SAMN02745119_01564
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: SAMN02745119_01568
symbol: pfkA-2
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.


ensembl_gene_id: SAMN02745119_01573
symbol: SJZ77042.1
gene_biotype: protein_coding
description:
  Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: SAMN02745119_01580
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: SAMN02745119_01581
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: SAMN02745119_01582
symbol: SJZ77321.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN02745119_01585
symbol: SJZ77415.1
gene_biotype: protein_coding
description:
  3-deoxy-D-arabinoheptulosonate-7-phosphate synthase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).


ensembl_gene_id: SAMN02745119_01590
symbol: mrdB
gene_biotype: protein_coding
description:
  Cell elongation-specific peptidoglycan biosynthesis regulator RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: SAMN02745119_01591
symbol: secA
gene_biotype: protein_coding
description:
  Protein translocase subunit secA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: SAMN02745119_01592
symbol: argJ
gene_biotype: protein_coding
description:
  Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: SAMN02745119_01603
symbol: SJZ77801.1
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: SAMN02745119_01612
symbol: mltG
gene_biotype: protein_coding
description:
  UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: SAMN02745119_01616
symbol: rplS
gene_biotype: protein_coding
description:
  LSU ribosomal protein L19P; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: SAMN02745119_01618
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (Guanine37-N(1)-) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: SAMN02745119_01619
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: SAMN02745119_01622
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the i [...]


ensembl_gene_id: SAMN02745119_01646
symbol: SJZ78981.1
gene_biotype: protein_coding
description:
  mRNA-degrading endonuclease (mRNA interferase) YafQ, toxin component of the YafQ-DinJ toxin-antitoxin module.


ensembl_gene_id: SAMN02745119_01651
symbol: SJZ79137.1
gene_biotype: protein_coding
description:
  Stage II sporulation protein AA (anti-sigma F factor antagonist); Belongs to the anti-sigma-factor antagonist family.


ensembl_gene_id: SAMN02745119_01654
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol phosphate aminotransferase apoenzyme; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: SAMN02745119_01682
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: SAMN02745119_01683
symbol: bioD
gene_biotype: protein_coding
description:
  Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: SAMN02745119_01700
symbol: rlpA
gene_biotype: protein_coding
description:
  Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: SAMN02745119_01723
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: SAMN02745119_01724
symbol: groS
gene_biotype: protein_coding
description:
  Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: SAMN02745119_01725
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: SAMN02745119_01737
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: SAMN02745119_01757
symbol: bamD
gene_biotype: protein_coding
description:
  Beta-barrel assembly machine subunit BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: SAMN02745119_01758
symbol: plsY
gene_biotype: protein_coding
description:
  Acyl-phosphate glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: SAMN02745119_01766
symbol: tpx
gene_biotype: protein_coding
description:
  Thiol peroxidase (atypical 2-Cys peroxiredoxin); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.


ensembl_gene_id: SAMN02745119_01779
symbol: SJZ84085.1
gene_biotype: protein_coding
description:
  tRNA-U20a,U20b-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: SAMN02745119_01809
symbol: srkA
gene_biotype: protein_coding
description:
  Ser/Thr protein kinase RdoA involved in Cpx stress response, MazF antagonist; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response.


ensembl_gene_id: SAMN02745119_01835
symbol: dapL
gene_biotype: protein_coding
description:
  LL-diaminopimelate aminotransferase apoenzyme; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate.


ensembl_gene_id: SAMN02745119_01838
symbol: rpsJ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: SAMN02745119_01839
symbol: rplC
gene_biotype: protein_coding
description:
  LSU ribosomal protein L3P; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: SAMN02745119_01841
symbol: rplW
gene_biotype: protein_coding
description:
  LSU ribosomal protein L23P; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: SAMN02745119_01842
symbol: rplB
gene_biotype: protein_coding
description:
  LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: SAMN02745119_01843
symbol: rpsS
gene_biotype: protein_coding
description:
  SSU ribosomal protein S19P; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: SAMN02745119_01844
symbol: rplV
gene_biotype: protein_coding
description:
  LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: SAMN02745119_01845
symbol: rpsC
gene_biotype: protein_coding
description:
  SSU ribosomal protein S3P; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: SAMN02745119_01846
symbol: rplP
gene_biotype: protein_coding
description:
  LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: SAMN02745119_01848
symbol: rpsQ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: SAMN02745119_01849
symbol: rplN
gene_biotype: protein_coding
description:
  LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: SAMN02745119_01850
symbol: rplX
gene_biotype: protein_coding
description:
  LSU ribosomal protein L24P; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: SAMN02745119_01851
symbol: rplE
gene_biotype: protein_coding
description:
  LSU ribosomal protein L5P; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: SAMN02745119_01852
symbol: rpsZ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S14P; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: SAMN02745119_01853
symbol: rpsH
gene_biotype: protein_coding
description:
  SSU ribosomal protein S8P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: SAMN02745119_01854
symbol: rplF
gene_biotype: protein_coding
description:
  LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: SAMN02745119_01855
symbol: rplR
gene_biotype: protein_coding
description:
  LSU ribosomal protein L18P; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: SAMN02745119_01856
symbol: rpsE
gene_biotype: protein_coding
description:
  SSU ribosomal protein S5P; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: SAMN02745119_01858
symbol: rplO
gene_biotype: protein_coding
description:
  LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: SAMN02745119_01859
symbol: secY
gene_biotype: protein_coding
description:
  Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: SAMN02745119_01860
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: SAMN02745119_01861
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: SAMN02745119_01862
symbol: rpsM
gene_biotype: protein_coding
description:
  SSU ribosomal protein S13P; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: SAMN02745119_01863
symbol: rpsK
gene_biotype: protein_coding
description:
  SSU ribosomal protein S11P; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: SAMN02745119_01864
symbol: rpsD
gene_biotype: protein_coding
description:
  SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: SAMN02745119_01865
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN02745119_01892
symbol: nhaA
gene_biotype: protein_coding
description:
  Sodium/proton antiporter, NhaA family; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.


ensembl_gene_id: SAMN02745119_01968
symbol: SJZ91115.1
gene_biotype: protein_coding
description:
  Acyl-[acyl-carrier-protein]-phospholipid O-acyltransferase / long-chain-fatty-acid--[acyl-carrier-protein] ligase.


ensembl_gene_id: SAMN02745119_01987
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase (homohexameric); Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.


ensembl_gene_id: SAMN02745119_01988
symbol: hisI
gene_biotype: protein_coding
description:
  phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.


ensembl_gene_id: SAMN02745119_02020
symbol: SJZ92284.1
gene_biotype: protein_coding
description:
  Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: SAMN02745119_02024
symbol: rsmI
gene_biotype: protein_coding
description:
  16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: SAMN02745119_02027
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: SAMN02745119_02029
symbol: SJZ92472.1
gene_biotype: protein_coding
description:
  Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN02745119_02041
symbol: SJZ92660.1
gene_biotype: protein_coding
description:
  Tat (twin-arginine translocation) pathway signal sequence; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN02745119_02044
symbol: moaC
gene_biotype: protein_coding
description:
  Cyclic pyranopterin monophosphate synthase subunit MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: SAMN02745119_02046
symbol: mobA
gene_biotype: protein_coding
description:
  Molybdenum cofactor guanylyltransferase; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.


ensembl_gene_id: SAMN02745119_02047
symbol: SJZ92786.1
gene_biotype: protein_coding
description:
  Molybdopterin-guanine dinucleotide biosynthesis protein MobB; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN02745119_02048
symbol: moaA
gene_biotype: protein_coding
description:
  Cyclic pyranopterin monophosphate synthase subunit MoaA; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: SAMN02745119_02050
symbol: SJZ93025.1
gene_biotype: protein_coding
description:
  Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: SAMN02745119_02060
symbol: queC
gene_biotype: protein_coding
description:
  preQ(0) biosynthesis protein QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: SAMN02745119_02065
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: SAMN02745119_02069
symbol: nusB
gene_biotype: protein_coding
description:
  NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: SAMN02745119_02070
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: SAMN02745119_02073
symbol: nifH
gene_biotype: protein_coding
description:
  Mo-nitrogenase iron protein subunit NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.


ensembl_gene_id: SAMN02745119_02084
symbol: SJZ94032.1
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase, anaerobic; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: SAMN02745119_02088
symbol: lptD
gene_biotype: protein_coding
description:
  LPS-assembly protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.


ensembl_gene_id: SAMN02745119_02089
symbol: SJZ94162.1
gene_biotype: protein_coding
description:
  Dihydrofolate synthase / folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: SAMN02745119_02090
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: SAMN02745119_02091
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: SAMN02745119_02096
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: SAMN02745119_02097
symbol: rnr
gene_biotype: protein_coding
description:
  RNAse R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: SAMN02745119_02098
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: SAMN02745119_02103
symbol: SJZ95490.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: SAMN02745119_02111
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: SAMN02745119_02112
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase); Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: SAMN02745119_02132
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: SAMN02745119_02133
symbol: SJZ96080.1
gene_biotype: protein_coding
description:
  Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: SAMN02745119_02135
symbol: ribBA-2
gene_biotype: protein_coding
description:
  GTP cyclohydrolase II /3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: SAMN02745119_02136
symbol: queH
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: SAMN02745119_02137
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: SAMN02745119_02152
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: SAMN02745119_02158
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: SAMN02745119_02160
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: SAMN02745119_02161
symbol: SJZ96587.1
gene_biotype: protein_coding
description:
  SSU ribosomal protein S1P; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.


ensembl_gene_id: SAMN02745119_02164
symbol: SJZ96637.1
gene_biotype: protein_coding
description:
  Methionine synthase (B12-dependent); Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.


ensembl_gene_id: SAMN02745119_02165
symbol: SJZ96674.1
gene_biotype: protein_coding
description:
  5,10-methylenetetrahydrofolate reductase (NAD(P)); Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: SAMN02745119_02166
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: SAMN02745119_02168
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: SAMN02745119_02169
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: SAMN02745119_02183
symbol: purN
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: SAMN02745119_02186
symbol: SJZ97119.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN02745119_02194
symbol: trmL
gene_biotype: protein_coding
description:
  tRNA (cytidine/uridine-2'-O-)-methyltransferase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.


ensembl_gene_id: SAMN02745119_02195
symbol: SJZ97289.1
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SAMN02745119_02196
symbol: pyrR
gene_biotype: protein_coding
description:
  Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.


ensembl_gene_id: SAMN02745119_02197
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: SAMN02745119_02198
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: SAMN02745119_02204
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: SAMN02745119_02248
symbol: SJZ99135.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein, PAAT family /amino acid ABC transporter membrane protein, PAAT family.


ensembl_gene_id: SAMN02745119_02258
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA (cytosine1402-N4)-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: SAMN02745119_02261
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: SAMN02745119_02262
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: SAMN02745119_02263
symbol: mraY
gene_biotype: protein_coding
description:
  Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: SAMN02745119_02264
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: SAMN02745119_02265
symbol: ftsW
gene_biotype: protein_coding
description:
  Cell division-specific peptidoglycan biosynthesis regulator FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily.


ensembl_gene_id: SAMN02745119_02266
symbol: murG
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: SAMN02745119_02269
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: SAMN02745119_02270
symbol: ftsQ
gene_biotype: protein_coding
description:
  Cell division protein FtsQ; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily.


ensembl_gene_id: SAMN02745119_02271
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: SAMN02745119_02272
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: SAMN02745119_02281
symbol: mqnD
gene_biotype: protein_coding
description:
  1,4-dihydroxy-6-naphthoate synthase; Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2); Belongs to the MqnA/MqnD family. MqnD subfamily.


ensembl_gene_id: SAMN02745119_02284
symbol: queF
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.


ensembl_gene_id: SAMN02745119_02289
symbol: SJZ99892.1
gene_biotype: protein_coding
description:
  Mo-nitrogenase MoFe protein subunit NifK; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.


ensembl_gene_id: SAMN02745119_02297
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: SAMN02745119_02301
symbol: glmU
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: SAMN02745119_02303
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN02745119_02311
symbol: SKA00361.1
gene_biotype: protein_coding
description:
  cob(I)yrinic acid a,c-diamide adenosyltransferase; Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids.


ensembl_gene_id: SAMN02745119_02326
symbol: SKA01392.1
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.


ensembl_gene_id: SAMN02745119_02327
symbol: SKA01414.1
gene_biotype: protein_coding
description:
  NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.


ensembl_gene_id: SAMN02745119_02332
symbol: mqnA
gene_biotype: protein_coding
description:
  Chorismate dehydratase; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: SAMN02745119_02335
symbol: SKA01568.1
gene_biotype: protein_coding
description:
  Biotin carboxylase /acetyl-CoA carboxylase carboxyltransferase subunit alpha; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: SAMN02745119_02336
symbol: SKA01589.1
gene_biotype: protein_coding
description:
  Biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: SAMN02745119_02338
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: SAMN02745119_02341
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: SAMN02745119_02342
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: SAMN02745119_02343
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: SAMN02745119_02388
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: SAMN02745119_02403
symbol: cysC
gene_biotype: protein_coding
description:
  Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.


ensembl_gene_id: SAMN02745119_02412
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: SAMN02745119_02414
symbol: greB
gene_biotype: protein_coding
description:
  Transcription elongation factor GreB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.


ensembl_gene_id: SAMN02745119_02419
symbol: SKA04107.1
gene_biotype: protein_coding
description:
  Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: SAMN02745119_02420
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: SAMN02745119_02425
symbol: SKA04191.1
gene_biotype: protein_coding
description:
  Bacterial nucleoid protein Hbs; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: SAMN02745119_02426
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: SAMN02745119_02427
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: SAMN02745119_02428
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: SAMN02745119_02432
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: SAMN02745119_02434
symbol: SKA04355.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: SAMN02745119_02436
symbol: SKA04407.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN02745119_02437
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: SAMN02745119_02439
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: SAMN02745119_02440
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate:acyl-[acyl carrier protein] acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: SAMN02745119_02445
symbol: rnc
gene_biotype: protein_coding
description:
  RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: SAMN02745119_02446
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: SAMN02745119_02449
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: SAMN02745119_02450
symbol: ppnP
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.


ensembl_gene_id: SAMN02745119_02454
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN02745119_02457
symbol: SKA04895.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745119_02458
symbol: SKA04921.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN02745119_02462
symbol: SKA05005.1
gene_biotype: protein_coding
description:
  phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).


ensembl_gene_id: SAMN02745119_02464
symbol: SKA05044.1
gene_biotype: protein_coding
description:
  Indolepyruvate ferredoxin oxidoreductase alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.


ensembl_gene_id: SAMN02745119_02471
symbol: SKA05210.1
gene_biotype: protein_coding
description:
  23S rRNA m(5)U-1939 methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: SAMN02745119_02474
symbol: queE
gene_biotype: protein_coding
description:
  Organic radical activating enzyme; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: SAMN02745119_02479
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: SAMN02745119_02482
symbol: SKA05408.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: SAMN02745119_02487
symbol: SKA05622.1
gene_biotype: protein_coding
description:
  Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: SAMN02745119_02506
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: SAMN02745119_02508
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: SAMN02745119_02511
symbol: vapC-4
gene_biotype: protein_coding
description:
  tRNA(fMet)-specific endonuclease VapC; Toxic component of a toxin-antitoxin (TA) system. An RNase. Belongs to the PINc/VapC protein family.


ensembl_gene_id: SAMN02745119_02528
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: SAMN02745119_02533
symbol: rhlB
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase RhlB; DEAD-box RNA helicase involved in RNA degradation. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.


ensembl_gene_id: SAMN02745119_02539
symbol: SKA07440.1
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: SAMN02745119_02540
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: SAMN02745119_02552
symbol: pyrK
gene_biotype: protein_coding
description:
  Dihydroorotate oxidase B, electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).


ensembl_gene_id: SAMN02745119_02553
symbol: SKA07756.1
gene_biotype: protein_coding
description:
  [SSU ribosomal protein S18P]-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.


ensembl_gene_id: SAMN02745119_02560
symbol: rsmA
gene_biotype: protein_coding
description:
  Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: SAMN02745119_02561
symbol: tsaD
gene_biotype: protein_coding
description:
  O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: SAMN02745119_02565
symbol: SKA08003.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: SAMN02745119_02596
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]


ensembl_gene_id: SAMN02745119_02598
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: SAMN02745119_02605
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: SAMN02745119_02660
symbol: lolD
gene_biotype: protein_coding
description:
  Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.


ensembl_gene_id: SAMN02745119_02661
symbol: bamA
gene_biotype: protein_coding
description:
  Beta-barrel assembly machine subunit BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: SAMN02745119_02665
symbol: lpxA
gene_biotype: protein_coding
description:
  acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: SAMN02745119_02668
symbol: lpxB
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: SAMN02745119_02670
symbol: SKA10726.1
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: SAMN02745119_02671
symbol: lpxK
gene_biotype: protein_coding
description:
  lipid-A-disaccharide kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: SAMN02745119_02685
symbol: glmS
gene_biotype: protein_coding
description:
  Glutamine--fructose-6-phosphate transaminase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: SAMN02745119_02689
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: SAMN02745119_02690
symbol: hisG-2
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase (homohexameric); Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: SAMN02745119_02693
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: SAMN02745119_02698
symbol: hppA
gene_biotype: protein_coding
description:
  K(+)-stimulated pyrophosphate-energized sodium pump; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force.


ensembl_gene_id: SAMN02745119_02725
symbol: SKA11853.1
gene_biotype: protein_coding
description:
  methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: SAMN02745119_02726
symbol: murJ
gene_biotype: protein_coding
description:
  Putative peptidoglycan lipid II flippase; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: SAMN02745119_02746
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: SAMN02745119_02749
symbol: SKA12333.1
gene_biotype: protein_coding
description:
  Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily.


ensembl_gene_id: SAMN02745119_02752
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: SAMN02745119_02753
symbol: rpsO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: SAMN02745119_02754
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: SAMN02745119_02756
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: SAMN02745119_02757
symbol: infB
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 2 (bIF-2); One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: SAMN02745119_02760
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: SAMN02745119_02762
symbol: bioC
gene_biotype: protein_coding
description:
  malonyl-CoA O-methyltransferase; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway.


ensembl_gene_id: SAMN02745119_02764
symbol: bioF
gene_biotype: protein_coding
description:
  Glycine C-acetyltransferase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.


ensembl_gene_id: SAMN02745119_02767
symbol: SKA12662.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.


ensembl_gene_id: SAMN02745119_02768
symbol: SKA12672.1
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: SAMN02745119_02786
symbol: ruvC
gene_biotype: protein_coding
description:
  Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: SAMN02745119_02787
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: SAMN02745119_02797
symbol: trmJ
gene_biotype: protein_coding
description:
  tRNA/rRNA methyltransferase; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: SAMN02745119_02816
symbol: cheD
gene_biotype: protein_coding
description:
  CheD, stimulates methylation of MCP proteins; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: SAMN02745119_02822
symbol: birA
gene_biotype: protein_coding
description:
  Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: SAMN02745119_02823
symbol: coaX
gene_biotype: protein_coding
description:
  Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: SAMN02745119_02833
symbol: SKA14182.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 32 subunit, RpoH; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02745119_02838
symbol: tuf
gene_biotype: protein_coding
description:
  Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: SAMN02745119_02841
symbol: SKA14633.1
gene_biotype: protein_coding
description:
  NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC.


ensembl_gene_id: SAMN02745119_02845
symbol: SKA14700.1
gene_biotype: protein_coding
description:
  Cardiolipin synthetase 2; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.


ensembl_gene_id: SAMN02745119_02856
symbol: SKA14868.1
gene_biotype: protein_coding
description:
  Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: SAMN02745119_02857
symbol: SKA14882.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: SAMN02745119_02859
symbol: mqnB
gene_biotype: protein_coding
description:
  Futalosine hydrolase; Catalyzes the hydrolysis of futalosine (FL) to dehypoxanthine futalosine (DHFL) and hypoxanthine, a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: SAMN02745119_02861
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: SAMN02745119_02868
symbol: SKA14998.1
gene_biotype: protein_coding
description:
  Molybdate transport system ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family.


ensembl_gene_id: SAMN02745119_02869
symbol: SKA15008.1
gene_biotype: protein_coding
description:
  Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: SAMN02745119_02874
symbol: nifH-3
gene_biotype: protein_coding
description:
  Nitrogenase iron protein NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.


ensembl_gene_id: SAMN02745119_02903
symbol: dksA
gene_biotype: protein_coding
description:
  Transcriptional regulator, TraR/DksA family; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters.


ensembl_gene_id: SAMN02745119_02904
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA/Sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: SAMN02745119_02908
symbol: ubiX
gene_biotype: protein_coding
description:
  4-hydroxy-3-polyprenylbenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: SAMN02745119_02912
symbol: macB-2
gene_biotype: protein_coding
description:
  Macrolide transport system ATP-binding/permease protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.


ensembl_gene_id: SAMN02745119_02913
symbol: SKA16152.1
gene_biotype: protein_coding
description:
  Membrane fusion protein, macrolide-specific efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN02745119_02936
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: SAMN02745119_02940
symbol: hslO
gene_biotype: protein_coding
description:
  Molecular chaperone Hsp33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: SAMN02745119_02947
symbol: mscL
gene_biotype: protein_coding
description:
  Large conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: SAMN02745119_02956
symbol: SKA17237.1
gene_biotype: protein_coding
description:
  Type IV pilus assembly protein PilB; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.


ensembl_gene_id: SAMN02745119_02957
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: SAMN02745119_02974
symbol: SKA17385.1
gene_biotype: protein_coding
description:
  Outer membrane protein TolC; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.


ensembl_gene_id: SAMN02745119_02976
symbol: SKA17400.1
gene_biotype: protein_coding
description:
  MFS transporter, DHA2 family, multidrug resistance protein; Belongs to the major facilitator superfamily.


ensembl_gene_id: SAMN02745119_02981
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.


ensembl_gene_id: SAMN02745119_02984
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: SAMN02745119_02986
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: SAMN02745119_02988
symbol: SKA17530.1
gene_biotype: protein_coding
description:
  Protein translocase subunit secG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: SAMN02745119_02989
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: SAMN02745119_02991
symbol: SKA17552.1
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN02745119_02994
symbol: rph
gene_biotype: protein_coding
description:
  RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: SAMN02745119_02995
symbol: SKA17883.1
gene_biotype: protein_coding
description:
  XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: SAMN02745119_03002
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: SAMN02745119_03004
symbol: tgt
gene_biotype: protein_coding
description:
  tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...]


ensembl_gene_id: SAMN02745119_03008
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine--tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: SAMN02745119_03010
symbol: yajC
gene_biotype: protein_coding
description:
  Protein translocase subunit yajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: SAMN02745119_03011
symbol: secD
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: SAMN02745119_03012
symbol: secF
gene_biotype: protein_coding
description:
  Protein translocase subunit secF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: SAMN02745119_03015
symbol: SKA18183.1
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: SAMN02745119_03022
symbol: SKA18297.1
gene_biotype: protein_coding
description:
  Kef-type potassium/proton antiporter, CPA2 family; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: SAMN02745119_03053
symbol: cowN
gene_biotype: protein_coding
description:
  Hypothetical protein; Is required to sustain N(2)-dependent growth in the presence of low levels of carbon monoxide (CO). Probably acts by protecting the N(2) fixation ability of the nitrogenase complex, which is inactivated in the presence of CO.


ensembl_gene_id: SAMN02745119_03058
symbol: purT
gene_biotype: protein_coding
description:
  Formate-dependent phosphoribosylglycinamide formyltransferase; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family.


ensembl_gene_id: SAMN02745119_03081
symbol: SKA19621.1
gene_biotype: protein_coding
description:
  Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.


ensembl_gene_id: SAMN02745119_03084
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase, component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concent [...]


ensembl_gene_id: SAMN02745119_03099
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: SAMN02745119_03109
symbol: ubiE
gene_biotype: protein_coding
description:
  Demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: SAMN02745119_03120
symbol: SKA20316.1
gene_biotype: protein_coding
description:
  Hydrogenase maturation protein, carbamoyltransferase HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide.


ensembl_gene_id: SAMN02745119_03128
symbol: SKA20424.1
gene_biotype: protein_coding
description:
  Adenosylcobinamide kinase; Catalyzes ATP-dependent phosphorylation of adenosylcobinamide and addition of GMP to adenosylcobinamide phosphate.


ensembl_gene_id: SAMN02745119_03129
symbol: cobT
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: SAMN02745119_03173
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: SAMN02745119_03180
symbol: SKA21903.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN02745119_03181
symbol: hpf
gene_biotype: protein_coding
description:
  Sigma 54 modulation protein /SSU ribosomal protein S30P; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: SAMN02745119_03182
symbol: hprK
gene_biotype: protein_coding
description:
  Hpr(Ser) kinase/phosphatase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr).


ensembl_gene_id: SAMN02745119_03186
symbol: SKA21992.1
gene_biotype: protein_coding
description:
  Type 4 prepilin peptidase 1 Aspartic peptidase. MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: SAMN02745119_03193
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: SAMN02745119_03194
symbol: SKA22190.1
gene_biotype: protein_coding
description:
  23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN02745119_03197
symbol: thrS
gene_biotype: protein_coding
description:
  Ser-tRNA(Thr) hydrolase /threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: SAMN02745119_03201
symbol: rplT
gene_biotype: protein_coding
description:
  LSU ribosomal protein L20P; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: SAMN02745119_03202
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: SAMN02745119_03203
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: SAMN02745119_03219
symbol: bioA
gene_biotype: protein_coding
description:
  Adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.


ensembl_gene_id: SAMN02745119_03242
symbol: SKA23051.1
gene_biotype: protein_coding
description:
  Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: SAMN02745119_03243
symbol: SKA23063.1
gene_biotype: protein_coding
description:
  Condensin subunit ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: SAMN02745119_03252
symbol: SKA23123.1
gene_biotype: protein_coding
description:
  DNA-(apurinic or apyrimidinic site) lyase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: SAMN02745119_03283
symbol: msrB-2
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: SAMN02745119_03293
symbol: clpB
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: SAMN02745119_03309
symbol: katG
gene_biotype: protein_coding
description:
  Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.


ensembl_gene_id: SAMN02745119_03328
symbol: secE
gene_biotype: protein_coding
description:
  Protein translocase subunit secE/sec61 gamma; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: SAMN02745119_03329
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: SAMN02745119_03330
symbol: rplK
gene_biotype: protein_coding
description:
  LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: SAMN02745119_03331
symbol: rplA
gene_biotype: protein_coding
description:
  LSU ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: SAMN02745119_03332
symbol: rplJ
gene_biotype: protein_coding
description:
  LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: SAMN02745119_03333
symbol: rplL
gene_biotype: protein_coding
description:
  LSU ribosomal protein L12P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: SAMN02745119_03334
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN02745119_03336
symbol: rpsL
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: SAMN02745119_03337
symbol: rpsG
gene_biotype: protein_coding
description:
  SSU ribosomal protein S7P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: SAMN02745119_03338
symbol: fusA
gene_biotype: protein_coding
description:
  Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...]


ensembl_gene_id: SAMN02745119_03341
symbol: fur-2
gene_biotype: protein_coding
description:
  Fur family transcriptional regulator, peroxide stress response regulator; Belongs to the Fur family.


ensembl_gene_id: SAMN02745119_03345
symbol: SKA24838.1
gene_biotype: protein_coding
description:
  Type I restriction enzyme, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.


ensembl_gene_id: SAMN02745119_03353
symbol: efp-2
gene_biotype: protein_coding
description:
  Translation elongation factor P (EF-P); Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: SAMN02745119_03354
symbol: infA
gene_biotype: protein_coding
description:
  Bacterial translation initiation factor 1 (bIF-1); One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: SAMN02745119_03391
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


# pathwayInfo

id: CL:1013
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1013_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: CL:1023
description: Mixed, incl. Fatty acid degradation, and BFD-like [2Fe-2S]-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1023_Mixed,_incl._Fatty_acid_degradation,_and_BFD-like_[2Fe-2S]-binding_domain


id: CL:1039
description: Mixed, incl. Cation efflux family, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1039_Mixed,_incl._Cation_efflux_family,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:1040
description: Mixed, incl. Cation efflux family, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1040_Mixed,_incl._Cation_efflux_family,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:105
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:105_Pyruvate_ferredoxin/flavodoxin_oxidoreductase,_and_Pyruvate:ferredoxin_oxidoreductase_core_domain_II

description:
  Pyruvate ferredoxin/flavodoxin oxidoreductase, and Pyruvate:ferredoxin oxidoreductase core domain II


id: CL:1053
description: Mixed, incl. AI-2E family transporter, and Calcineurin-like phosphoesterase domain, lpxH-type
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1053_Mixed,_incl._AI-2E_family_transporter,_and_Calcineurin-like_phosphoesterase_domain,_lpxH-type


id: CL:1062
description: Mixed, incl. Selenocysteine metabolic process, and Cell redox homeostasis
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1062_Mixed,_incl._Selenocysteine_metabolic_process,_and_Cell_redox_homeostasis


id: CL:1063
description: Mixed, incl. Cell redox homeostasis, and Benzoate degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1063_Mixed,_incl._Cell_redox_homeostasis,_and_Benzoate_degradation


id: CL:1064
description: Mixed, incl. Oxidoreductase activity, acting on a sulfur group of donors, and Fermentation
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1064_Mixed,_incl._Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_and_Fermentation


id: CL:1067
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1067_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor,_and_Cell_redox_homeostasis

description:
  Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor, and Cell redox homeostasis


id: CL:1087
description: Mixed, incl. Cell redox homeostasis, and Peroxiredoxin activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1087_Mixed,_incl._Cell_redox_homeostasis,_and_Peroxiredoxin_activity


id: CL:1100
description: Selenocysteine metabolic process, and Selenium
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1100_Selenocysteine_metabolic_process,_and_Selenium


id: CL:1120
description: Translation, and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1120_Translation,_and_Ribosome_biogenesis


id: CL:1121
description: Translation, and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1121_Translation,_and_Ribosome_biogenesis


id: CL:1122
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1122_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:1124
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1124_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:1125
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1125_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:1126
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1126_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:1127
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1127_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:1128
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1128_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:1129
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1129_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:1130
description: Translation, and Ribonucleoside triphosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1130_Translation,_and_Ribonucleoside_triphosphate_biosynthetic_process


id: CL:1132
description: Structural constituent of ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1132_Structural_constituent_of_ribosome,_and_Translation_regulator_activity


id: CL:1134
description: Structural constituent of ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1134_Structural_constituent_of_ribosome,_and_Translation_regulator_activity


id: CL:1136
description: Structural constituent of ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1136_Structural_constituent_of_ribosome,_and_Translation_regulator_activity


id: CL:1139
description: Structural constituent of ribosome, and Translational elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1139_Structural_constituent_of_ribosome,_and_Translational_elongation


id: CL:1144
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1144_Structural_constituent_of_ribosome


id: CL:1148
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1148_Structural_constituent_of_ribosome


id: CL:115
description: Malate dehydrogenase activity, and Aldehyde dehydrogenase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:115_Malate_dehydrogenase_activity,_and_Aldehyde_dehydrogenase_domain


id: CL:1150
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1150_Structural_constituent_of_ribosome


id: CL:1153
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1153_Structural_constituent_of_ribosome


id: CL:1155
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1155_Structural_constituent_of_ribosome


id: CL:1157
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1157_Structural_constituent_of_ribosome


id: CL:1158
description: Large ribosomal subunit, and rRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1158_Large_ribosomal_subunit,_and_rRNA-binding


id: CL:1160
description: Large ribosomal subunit, and Translation protein, beta-barrel domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1160_Large_ribosomal_subunit,_and_Translation_protein,_beta-barrel_domain_superfamily


id: CL:1178
description: Large ribosomal subunit, and tRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1178_Large_ribosomal_subunit,_and_tRNA-binding


id: CL:1188
description: Small ribosomal subunit, and rRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1188_Small_ribosomal_subunit,_and_rRNA-binding


id: CL:1226
description: Mixed, incl. L28p-like, and Zinc-binding ribosomal protein
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1226_Mixed,_incl._L28p-like,_and_Zinc-binding_ribosomal_protein


id: CL:1275
description: Mixed, incl. Non-homologous end-joining, and tRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1275_Mixed,_incl._Non-homologous_end-joining,_and_tRNA_pseudouridine_synthesis


id: CL:129
description: Taurine and hypotaurine metabolism, and CoA hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:129_Taurine_and_hypotaurine_metabolism,_and_CoA_hydrolase_activity


id: CL:1318
description: Intracellular protein transmembrane transport, and Protein-transporting ATPase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1318_Intracellular_protein_transmembrane_transport,_and_Protein-transporting_ATPase_activity


id: CL:1356
description: CTP metabolic process, and Cobalamin
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1356_CTP_metabolic_process,_and_Cobalamin


id: CL:1370
description: RNA helicase activity, and Exoribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1370_RNA_helicase_activity,_and_Exoribonuclease_activity


id: CL:1371
description: RNA helicase activity, and S1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1371_RNA_helicase_activity,_and_S1_domain


id: CL:1380
description: Exoribonuclease activity, and RNA 5-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1380_Exoribonuclease_activity,_and_RNA_5-end_processing


id: CL:1389
description: RNA pseudouridylate synthase, and OBG-type guanine nucleotide-binding (G) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1389_RNA_pseudouridylate_synthase,_and_OBG-type_guanine_nucleotide-binding_(G)_domain


id: CL:140
description: CoA-ligase, and Fumarate reductase flavoprotein C-term
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:140_CoA-ligase,_and_Fumarate_reductase_flavoprotein_C-term


id: CL:1403
description: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding, and lysyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1403_Aminoacyl-tRNA_synthetase,_class_Ia,_anticodon-binding,_and_lysyl-tRNA_aminoacylation


id: CL:1421
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1421_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_Aspartyl/Asparaginyl-tRNA_synthetase,_class_IIb

description:
  glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and Aspartyl/Asparaginyl-tRNA synthetase, class IIb


id: CL:1433
description: Mixed, incl. ELP3/YhcC, and K Homology domain, type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1433_Mixed,_incl._ELP3/YhcC,_and_K_Homology_domain,_type_2


id: CL:1444
description: Mixed, incl. Peptidyl-glutamine methylation, and Ribosome binding
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1444_Mixed,_incl._Peptidyl-glutamine_methylation,_and_Ribosome_binding


id: CL:1468
description: Mixed, incl. TRAM domain, and NusB family
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1468_Mixed,_incl._TRAM_domain,_and_NusB_family


id: CL:1486
description: Mixed, incl. Negative regulation of translation, and rRNA methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1486_Mixed,_incl._Negative_regulation_of_translation,_and_rRNA_methyltransferase_activity


id: CL:1488
description: Mixed, incl. Formyl transferase, C-terminal, and Regulation of cellular component biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1488_Mixed,_incl._Formyl_transferase,_C-terminal,_and_Regulation_of_cellular_component_biogenesis


id: CL:1511
description: Mixed, incl. Translation release factor activity, and RlmI-like, PUA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1511_Mixed,_incl._Translation_release_factor_activity,_and_RlmI-like,_PUA_domain


id: CL:1524
description: Mixed, incl. Tetratricopeptide repeats, and Protein folding
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1524_Mixed,_incl._Tetratricopeptide_repeats,_and_Protein_folding


id: CL:1525
description: Tetratricopeptide repeats, and Protein folding
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1525_Tetratricopeptide_repeats,_and_Protein_folding


id: CL:1526
description: Tetratricopeptide repeats, and Protein folding
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1526_Tetratricopeptide_repeats,_and_Protein_folding


id: CL:1528
description: Tetratricopeptide repeats, and WD40 repeat, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1528_Tetratricopeptide_repeats,_and_WD40_repeat,_conserved_site


id: CL:1533
description: Glycosyl transferase family 41, and Other types of O-glycan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1533_Glycosyl_transferase_family_41,_and_Other_types_of_O-glycan_biosynthesis


id: CL:156
description: Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:156_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:1564
description: Protein folding, and EF-hand domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1564_Protein_folding,_and_EF-hand_domain


id: CL:1566
description: Protein folding chaperone, and DnaJ domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1566_Protein_folding_chaperone,_and_DnaJ_domain


id: CL:1569
description: Protein folding chaperone, and DnaJ domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1569_Protein_folding_chaperone,_and_DnaJ_domain


id: CL:1592
description: Mixed, incl. EF-hand domain, and ER-Phagosome pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1592_Mixed,_incl._EF-hand_domain,_and_ER-Phagosome_pathway


id: CL:1602
description: Mixed, incl. Clp ATPase, C-terminal, and DNA condensation
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1602_Mixed,_incl._Clp_ATPase,_C-terminal,_and_DNA_condensation


id: CL:1616
description: Mixed, incl. Sigma-70 factor, region 1.2, and Crp-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1616_Mixed,_incl._Sigma-70_factor,_region_1.2,_and_Crp-type_HTH_domain


id: CL:1618
description: Crp-type HTH domain, and Sigma-70 factor, region 1.2
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1618_Crp-type_HTH_domain,_and_Sigma-70_factor,_region_1.2


id: CL:1639
description: Methyltransferase complex, and tRNA-dihydrouridine synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1639_Methyltransferase_complex,_and_tRNA-dihydrouridine_synthase


id: CL:1657
description: Mixed, incl. DNA repair, and DNA polymerase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1657_Mixed,_incl._DNA_repair,_and_DNA_polymerase_activity


id: CL:1659
description: DNA repair, and DNA polymerase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1659_DNA_repair,_and_DNA_polymerase_complex


id: CL:1660
description: DNA repair, and UvrD-like helicase C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1660_DNA_repair,_and_UvrD-like_helicase_C-terminal_domain


id: CL:1661
description: Mixed, incl. DNA damage sensor activity, and DNA/RNA polymerase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1661_Mixed,_incl._DNA_damage_sensor_activity,_and_DNA/RNA_polymerase_superfamily


id: CL:1663
description: Mismatch repair, and DNA/RNA polymerase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1663_Mismatch_repair,_and_DNA/RNA_polymerase_superfamily


id: CL:1677
description: DNA recombination and repair protein RecA-like, ATP-binding domain, and Autocatalytic cleavage
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1677_DNA_recombination_and_repair_protein_RecA-like,_ATP-binding_domain,_and_Autocatalytic_cleavage


id: CL:1686
description: DNA excision, and DNA helicase, UvrD/REP type
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1686_DNA_excision,_and_DNA_helicase,_UvrD/REP_type


id: CL:1698
description: DNA polymerase III complex, and PHP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1698_DNA_polymerase_III_complex,_and_PHP_domain


id: CL:1711
description: Mixed, incl. Regulation of DNA replication, and NUBPL iron-transfer P-loop NTPase
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1711_Mixed,_incl._Regulation_of_DNA_replication,_and_NUBPL_iron-transfer_P-loop_NTPase


id: CL:1727
description: Holliday junction helicase complex, and Endodeoxyribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1727_Holliday_junction_helicase_complex,_and_Endodeoxyribonuclease_activity


id: CL:1743
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1743_Helix-hairpin-helix,_base-excision_DNA_repair,_C-terminal,_and_Xylose_isomerase-like,_TIM_barrel_domain

description:
  Helix-hairpin-helix, base-excision DNA repair, C-terminal, and Xylose isomerase-like, TIM barrel domain


id: CL:1759
description: Mixed, incl. tRNA (guanine-N1-)-methyltransferase activity, and Selenium metabolism protein YedF
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1759_Mixed,_incl._tRNA_(guanine-N1-)-methyltransferase_activity,_and_Selenium_metabolism_protein_YedF


id: CL:176
description: 4Fe-4S dicluster domain, and Lactate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:176_4Fe-4S_dicluster_domain,_and_Lactate_metabolic_process


id: CL:1761
description: Mixed, incl. tRNA (guanine-N1-)-methyltransferase activity, and HDOD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1761_Mixed,_incl._tRNA_(guanine-N1-)-methyltransferase_activity,_and_HDOD_domain


id: CL:1782
description: Mixed, incl. Smr domain, and HNH nuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1782_Mixed,_incl._Smr_domain,_and_HNH_nuclease


id: CL:1784
description: Mixed, incl. Smr domain, and HNH nuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1784_Mixed,_incl._Smr_domain,_and_HNH_nuclease


id: CL:1802
description: Mixed, incl. PDZ domain 6, and Protein dephosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1802_Mixed,_incl._PDZ_domain_6,_and_Protein_dephosphorylation


id: CL:1820
description: Mixed, incl. Histone-like DNA-binding protein, and Cold shock, CspA
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1820_Mixed,_incl._Histone-like_DNA-binding_protein,_and_Cold_shock,_CspA


id: CL:1823
description: Histone-like DNA-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1823_Histone-like_DNA-binding_protein


id: CL:1849
description: Mixed, incl. Porin domain superfamily, and Sigma factor antagonist activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1849_Mixed,_incl._Porin_domain_superfamily,_and_Sigma_factor_antagonist_activity


id: CL:1865
description: Mixed, incl. Nicotinate and nicotinamide metabolism, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1865_Mixed,_incl._Nicotinate_and_nicotinamide_metabolism,_and_AAA_domain


id: CL:1866
description: Mixed, incl. Nicotinamide nucleotide metabolic process, and NUDIX domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1866_Mixed,_incl._Nicotinamide_nucleotide_metabolic_process,_and_NUDIX_domain


id: CL:1869
description: Nicotinamide nucleotide metabolic process, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1869_Nicotinamide_nucleotide_metabolic_process,_and_AAA_domain


id: CL:1871
description: NADP metabolic process, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1871_NADP_metabolic_process,_and_AAA_domain


id: CL:1899
description: Mixed, incl. NAD(+) synthetase, and RNA 5-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1899_Mixed,_incl._NAD(+)_synthetase,_and_RNA_5-end_processing


id: CL:190
description: 4Fe-4S binding domain, and CGCAxxGCC motif
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:190_4Fe-4S_binding_domain,_and_CGCAxxGCC_motif


id: CL:1914
description: Mixed, incl. Ion channel, and Poly A polymerase head domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1914_Mixed,_incl._Ion_channel,_and_Poly_A_polymerase_head_domain


id: CL:1930
description: Mixed, incl. Redoxin, and Prolipoprotein diacylglyceryl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1930_Mixed,_incl._Redoxin,_and_Prolipoprotein_diacylglyceryl_transferase


id: CL:1943
description: Mixed, incl. Carbohydrate metabolic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1943_Mixed,_incl._Carbohydrate_metabolic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:1944
description: Mixed, incl. Carbohydrate biosynthetic process, and Amino sugar and nucleotide sugar metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1944_Mixed,_incl._Carbohydrate_biosynthetic_process,_and_Amino_sugar_and_nucleotide_sugar_metabolism


id: CL:1945
description: Mixed, incl. Carbohydrate biosynthetic process, and Nucleotide-sugar metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1945_Mixed,_incl._Carbohydrate_biosynthetic_process,_and_Nucleotide-sugar_metabolic_process


id: CL:1947
description: Mixed, incl. Carbohydrate biosynthetic process, and Nucleotide-sugar metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1947_Mixed,_incl._Carbohydrate_biosynthetic_process,_and_Nucleotide-sugar_metabolic_process


id: CL:1948
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1948_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Nucleotide-diphospho-sugar_transferases


id: CL:1949
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1949_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Nucleotide-diphospho-sugar_transferases


id: CL:1950
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1950_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferases_group_1


id: CL:1951
description: O-Antigen nucleotide sugar biosynthesis, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1951_O-Antigen_nucleotide_sugar_biosynthesis,_and_Nucleotide-diphospho-sugar_transferases


id: CL:1952
description: O-Antigen nucleotide sugar biosynthesis, and Nucleotidyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1952_O-Antigen_nucleotide_sugar_biosynthesis,_and_Nucleotidyl_transferase


id: CL:1954
description: O-Antigen nucleotide sugar biosynthesis, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1954_O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyl_transferase_family_2


id: CL:1956
description: Polyketide sugar unit biosynthesis, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1956_Polyketide_sugar_unit_biosynthesis,_and_Glycosyl_transferase_family_2


id: CL:1958
description: Glycosyl transferase family 2, and Nucleotidyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1958_Glycosyl_transferase_family_2,_and_Nucleotidyl_transferase


id: CL:1982
description: Galactose metabolic process, and UDP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:1982_Galactose_metabolic_process,_and_UDP_binding_domain


id: CL:2003
description: Mixed, incl. NADP+ binding, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2003_Mixed,_incl._NADP+_binding,_and_Polysaccharide_biosynthetic_process


id: CL:2004
description: Mixed, incl. Glycosyl transferase, family 1, and Spore wall
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2004_Mixed,_incl._Glycosyl_transferase,_family_1,_and_Spore_wall


id: CL:2007
description: Mixed, incl. Spore wall, and Glycosyltransferase Family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2007_Mixed,_incl._Spore_wall,_and_Glycosyltransferase_Family_4


id: CL:201
description: Mixed, incl. Fatty acid metabolism, and Polyketide synthase, enoylreductase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:201_Mixed,_incl._Fatty_acid_metabolism,_and_Polyketide_synthase,_enoylreductase_domain


id: CL:202
description: Fatty acid metabolic process, and Beta-ketoacyl synthase, active site
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:202_Fatty_acid_metabolic_process,_and_Beta-ketoacyl_synthase,_active_site


id: CL:2027
description: NADP+ binding, and DegT/DnrJ/EryC1/StrS aminotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2027_NADP+_binding,_and_DegT/DnrJ/EryC1/StrS_aminotransferase


id: CL:2037
description: Mixed, incl. Glycosyltransferase subfamily 4-like, N-terminal domain, and NADP+ binding
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2037_Mixed,_incl._Glycosyltransferase_subfamily_4-like,_N-terminal_domain,_and_NADP+_binding


id: CL:2039
description: NADP+ binding, and Polysaccharide biosynthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2039_NADP+_binding,_and_Polysaccharide_biosynthesis_protein


id: CL:204
description: Fatty acid biosynthetic process, and Beta-ketoacyl synthase, active site
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:204_Fatty_acid_biosynthetic_process,_and_Beta-ketoacyl_synthase,_active_site


id: CL:2061
description: Mostly uncharacterized, incl. Flagellar FlaF, and Polysaccharide biosynthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2061_Mostly_uncharacterized,_incl._Flagellar_FlaF,_and_Polysaccharide_biosynthesis_protein


id: CL:2063
description: Mixed, incl. Polysaccharide biosynthesis protein, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2063_Mixed,_incl._Polysaccharide_biosynthesis_protein,_and_Nucleotide-diphospho-sugar_transferases


id: CL:2065
description: Mixed, incl. Nucleotide-diphospho-sugar transferases, and GHMP kinases C terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2065_Mixed,_incl._Nucleotide-diphospho-sugar_transferases,_and_GHMP_kinases_C_terminal


id: CL:2069
description: Mixed, incl. GHMP kinases C terminal , and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2069_Mixed,_incl._GHMP_kinases_C_terminal_,_and_Glycosyl_transferase_family_2


id: CL:2089
description: Mixed, incl. Flagellin, and Flagellar FlaF
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2089_Mixed,_incl._Flagellin,_and_Flagellar_FlaF


id: CL:2125
description: Mixed, incl. Lipopolysaccharide biosynthesis, and Membrane assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2125_Mixed,_incl._Lipopolysaccharide_biosynthesis,_and_Membrane_assembly


id: CL:2126
description: Lipopolysaccharide biosynthesis, and ThiF family
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2126_Lipopolysaccharide_biosynthesis,_and_ThiF_family


id: CL:2127
description: Lipid A biosynthesis, and Bacterial lipid A biosynthesis acyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2127_Lipid_A_biosynthesis,_and_Bacterial_lipid_A_biosynthesis_acyltransferase


id: CL:213
description: 3-oxoacyl-[acyl-carrier-protein] synthase activity, and S-acyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:213_3-oxoacyl-[acyl-carrier-protein]_synthase_activity,_and_S-acyltransferase_activity


id: CL:2156
description: Mixed, incl. Glycosyl transferase, family 9, and Carbohydrate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2156_Mixed,_incl._Glycosyl_transferase,_family_9,_and_Carbohydrate_metabolism


id: CL:2160
description: Glycosyl transferase, family 9, and Glycosyl transferase 4-like
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2160_Glycosyl_transferase,_family_9,_and_Glycosyl_transferase_4-like


id: CL:2181
description: Mixed, incl. Membrane assembly, and Lipoprotein localization
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2181_Mixed,_incl._Membrane_assembly,_and_Lipoprotein_localization


id: CL:2183
description: Lipoprotein localization, and Protein insertion into membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2183_Lipoprotein_localization,_and_Protein_insertion_into_membrane


id: CL:2202
description: Permease LptG/LptF-related, and Lipopolysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2202_Permease_LptG/LptF-related,_and_Lipopolysaccharide_transport


id: CL:2220
description: Mixed, incl. Domain of unknown function DUF4214, and rRNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2220_Mixed,_incl._Domain_of_unknown_function_DUF4214,_and_rRNA_catabolic_process


id: CL:2232
description: Mixed, incl. Viral process, and Polysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2232_Mixed,_incl._Viral_process,_and_Polysaccharide_transport


id: CL:2233
description: Mixed, incl. Viral process, and Polysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2233_Mixed,_incl._Viral_process,_and_Polysaccharide_transport


id: CL:2234
description: Mixed, incl. Polysaccharide transport, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2234_Mixed,_incl._Polysaccharide_transport,_and_ABC-2_transporter


id: CL:2237
description: Polysaccharide transport, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2237_Polysaccharide_transport,_and_ABC-2_transporter


id: CL:2255
description: Viral process, and Amidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2255_Viral_process,_and_Amidase_activity


id: CL:2267
description: Mixed, incl. Polymerase beta, nucleotidyltransferase, and AAA domain, group 14
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2267_Mixed,_incl._Polymerase_beta,_nucleotidyltransferase,_and_AAA_domain,_group_14


id: CL:2283
description: Mixed, incl. Iron-sulfur cluster-binding domain, and Ribonucleoside-triphosphate reductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2283_Mixed,_incl._Iron-sulfur_cluster-binding_domain,_and_Ribonucleoside-triphosphate_reductase_activity


id: CL:2286
description: Methyltransferase, class B, and Iron-sulfur cluster-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2286_Methyltransferase,_class_B,_and_Iron-sulfur_cluster-binding_domain


id: CL:2301
description: Radical SAM superfamily, and Ribonucleoside-triphosphate reductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2301_Radical_SAM_superfamily,_and_Ribonucleoside-triphosphate_reductase_activity


id: CL:2312
description: Mixed, incl. Terpenoid backbone biosynthesis, and Thiamine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2312_Mixed,_incl._Terpenoid_backbone_biosynthesis,_and_Thiamine_metabolic_process


id: CL:2315
description: Thiamine metabolic process, and Menaquinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2315_Thiamine_metabolic_process,_and_Menaquinone_biosynthesis


id: CL:2317
description: UbiD decarboxylyase family, and Menaquinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2317_UbiD_decarboxylyase_family,_and_Menaquinone_metabolic_process


id: CL:2358
description: Terpenoid backbone biosynthesis, and DNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2358_Terpenoid_backbone_biosynthesis,_and_DNA_catabolic_process


id: CL:2362
description: Isopentenyl diphosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2362_Isopentenyl_diphosphate_metabolic_process


id: CL:2387
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2387_Mixed,_incl._Terpenoid_cyclases/protein_prenyltransferase_alpha-alpha_toroid,_and_Glycosyltransferase_like_family_2

description:
  Mixed, incl. Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid, and Glycosyltransferase like family 2


id: CL:2401
description: Mixed, incl. Aminopeptidase activity, and Septation
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2401_Mixed,_incl._Aminopeptidase_activity,_and_Septation


id: CL:2402
description: Mixed, incl. Creatinase, N-terminal, and Peptidase family M20/M25/M40
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2402_Mixed,_incl._Creatinase,_N-terminal,_and_Peptidase_family_M20/M25/M40


id: CL:2418
description: Mixed, incl. Septation, and FlgT, N-terminal domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2418_Mixed,_incl._Septation,_and_FlgT,_N-terminal_domain_superfamily


id: CL:242
description: CoA carboxylase activity, and Biotin carboxylation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:242_CoA_carboxylase_activity,_and_Biotin_carboxylation_domain


id: CL:2430
description: Mixed, incl. Cell division, and Peptidoglycan metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2430_Mixed,_incl._Cell_division,_and_Peptidoglycan_metabolic_process


id: CL:2431
description: Mixed, incl. Cell division, and Peptidoglycan metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2431_Mixed,_incl._Cell_division,_and_Peptidoglycan_metabolic_process


id: CL:2432
description: Mixed, incl. Cell division, and Peptidoglycan metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2432_Mixed,_incl._Cell_division,_and_Peptidoglycan_metabolic_process


id: CL:2433
description: Mixed, incl. Aminoglycan biosynthetic process, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2433_Mixed,_incl._Aminoglycan_biosynthetic_process,_and_Cell_division


id: CL:2436
description: Mixed, incl. Aminoglycan biosynthetic process, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2436_Mixed,_incl._Aminoglycan_biosynthetic_process,_and_Cell_division_site


id: CL:2437
description: Aminoglycan biosynthetic process, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2437_Aminoglycan_biosynthetic_process,_and_Cell_division_site


id: CL:2438
description: Peptidoglycan biosynthesis, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2438_Peptidoglycan_biosynthesis,_and_Cell_division_site


id: CL:2439
description: Peptidoglycan synthesis, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2439_Peptidoglycan_synthesis,_and_Cell_division_site


id: CL:2442
description: Peptidoglycan synthesis, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2442_Peptidoglycan_synthesis,_and_Cell_division_site


id: CL:2445
description: Mur ligase family, catalytic domain, and Vancomycin resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2445_Mur_ligase_family,_catalytic_domain,_and_Vancomycin_resistance


id: CL:2475
description: Peptidoglycan glycosyltransferase activity, and Serine-type D-Ala-D-Ala carboxypeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2475_Peptidoglycan_glycosyltransferase_activity,_and_Serine-type_D-Ala-D-Ala_carboxypeptidase_activity


id: CL:2493
description: Mixed, incl. Lysin motif, and AMIN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2493_Mixed,_incl._Lysin_motif,_and_AMIN_domain


id: CL:2511
description: Mixed, incl. Peptidase M23, and PDZ domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2511_Mixed,_incl._Peptidase_M23,_and_PDZ_domain


id: CL:2527
description: Mixed, incl. Protein of unknown function DUF815, and Amino-acid racemase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2527_Mixed,_incl._Protein_of_unknown_function_DUF815,_and_Amino-acid_racemase_activity


id: CL:2536
description: Mixed, incl. YggU-like superfamily, and Alanine racemase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2536_Mixed,_incl._YggU-like_superfamily,_and_Alanine_racemase,_N-terminal


id: CL:2537
description: Mixed, incl. Alanine racemase, N-terminal, and Ribbon-helix-helix protein, CopG
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2537_Mixed,_incl._Alanine_racemase,_N-terminal,_and_Ribbon-helix-helix_protein,_CopG


id: CL:2546
description: Mixed, incl. YggU-like superfamily, and Protein refolding
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2546_Mixed,_incl._YggU-like_superfamily,_and_Protein_refolding


id: CL:2556
description: Mixed, incl. Aquaporin-like, and Aminoacyl-tRNA editing domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2556_Mixed,_incl._Aquaporin-like,_and_Aminoacyl-tRNA_editing_domain


id: CL:2571
description: Mixed, incl. Beta-lactamase, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2571_Mixed,_incl._Beta-lactamase,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:258
description: Mixed, incl. Beta-ketoacyl synthase, active site, and Monooxygenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:258_Mixed,_incl._Beta-ketoacyl_synthase,_active_site,_and_Monooxygenase_activity


id: CL:2584
description: Mixed, incl. Peptidyl-prolyl cis-trans isomerase, PpiC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2584_Mixed,_incl._Peptidyl-prolyl_cis-trans_isomerase,_PpiC-type


id: CL:2602
description: Mixed, incl. Queuosine biosynthesis, and Latent infection - Other responses of Mtb to phagocytosis
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2602_Mixed,_incl._Queuosine_biosynthesis,_and_Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis


id: CL:2603
description: Mixed, incl. Queuosine biosynthesis, and SecD/SecF GG Motif
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2603_Mixed,_incl._Queuosine_biosynthesis,_and_SecD/SecF_GG_Motif


id: CL:2604
description: Mixed, incl. Queuosine biosynthesis, and SecD/SecF GG Motif
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2604_Mixed,_incl._Queuosine_biosynthesis,_and_SecD/SecF_GG_Motif


id: CL:2605
description: Mixed, incl. SecD/SecF GG Motif, and Maturation of SSU-rRNA
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2605_Mixed,_incl._SecD/SecF_GG_Motif,_and_Maturation_of_SSU-rRNA


id: CL:2616
description: tRNA-guanine transglycosylase, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2616_tRNA-guanine_transglycosylase,_and_Sporulation


id: CL:2627
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2627_Oligopeptide/dipeptide_ABC_transporter,_C-terminal,_and_Binding-protein-dependent_transport_system_inner_membrane_component

description:
  Oligopeptide/dipeptide ABC transporter, C-terminal, and Binding-protein-dependent transport system inner membrane component


id: CL:2641
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2641_Mixed,_incl._(Uracil-5)-methyltransferase_family,_and_Signal_transduction_c-di-GMP_phosphodiesterase,_EAL/HD-GYP_domain-containing

description:
  Mixed, incl. (Uracil-5)-methyltransferase family, and Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing


id: CL:2658
description: Mixed, incl. HhH-GPD domain, and NmrA-like family
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2658_Mixed,_incl._HhH-GPD_domain,_and_NmrA-like_family


id: CL:2660
description: Mixed, incl. NmrA-like family, and Rare lipoprotein A
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2660_Mixed,_incl._NmrA-like_family,_and_Rare_lipoprotein_A


id: CL:2682
description: Mixed, incl. Peptidase S26A, signal peptidase I, and Metal ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2682_Mixed,_incl._Peptidase_S26A,_signal_peptidase_I,_and_Metal_ion_transport


id: CL:2684
description: Mixed, incl. Ferric-uptake regulator, and Transcriptional repressor, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2684_Mixed,_incl._Ferric-uptake_regulator,_and_Transcriptional_repressor,_C-terminal


id: CL:2705
description: Mixed, incl. Peptidase S26A, signal peptidase I, and Redoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2705_Mixed,_incl._Peptidase_S26A,_signal_peptidase_I,_and_Redoxin


id: CL:274
description: Mixed, incl. Enoyl-CoA hydratase/isomerase, and Microbody
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:274_Mixed,_incl._Enoyl-CoA_hydratase/isomerase,_and_Microbody


id: CL:2786
description: Histidine kinase domain, and Nucleotide cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2786_Histidine_kinase_domain,_and_Nucleotide_cyclase


id: CL:2787
description: Histidine kinase domain, and Nucleotide cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2787_Histidine_kinase_domain,_and_Nucleotide_cyclase


id: CL:2789
description: PAS domain superfamily, and Signal transduction histidine kinase-related protein, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2789_PAS_domain_superfamily,_and_Signal_transduction_histidine_kinase-related_protein,_C-terminal


id: CL:2792
description: PAS domain superfamily, and Signal transduction histidine kinase-related protein, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2792_PAS_domain_superfamily,_and_Signal_transduction_histidine_kinase-related_protein,_C-terminal


id: CL:2794
description: Histidine kinase domain, and Nucleotide cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2794_Histidine_kinase_domain,_and_Nucleotide_cyclase


id: CL:2797
description: PAS domain superfamily, and Signal transduction histidine kinase-related protein, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2797_PAS_domain_superfamily,_and_Signal_transduction_histidine_kinase-related_protein,_C-terminal


id: CL:2801
description: His Kinase A (phosphoacceptor) domain, and GGDEF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2801_His_Kinase_A_(phosphoacceptor)_domain,_and_GGDEF_domain


id: CL:2806
description: His Kinase A (phosphoacceptor) domain, and GGDEF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2806_His_Kinase_A_(phosphoacceptor)_domain,_and_GGDEF_domain


id: CL:2810
description: His Kinase A (phosphoacceptor) domain, and GGDEF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2810_His_Kinase_A_(phosphoacceptor)_domain,_and_GGDEF_domain


id: CL:2813
description: His Kinase A (phosphoacceptor) domain, and GGDEF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2813_His_Kinase_A_(phosphoacceptor)_domain,_and_GGDEF_domain


id: CL:2818
description: His Kinase A (phosphoacceptor) domain, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2818_His_Kinase_A_(phosphoacceptor)_domain,_and_Diguanylate_cyclase


id: CL:2821
description: His Kinase A (phosphoacceptor) domain, and EAL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2821_His_Kinase_A_(phosphoacceptor)_domain,_and_EAL_domain


id: CL:2825
description: Signal transduction histidine kinase, dimerisation/phosphoacceptor domain, and EAL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2825_Signal_transduction_histidine_kinase,_dimerisation/phosphoacceptor_domain,_and_EAL_domain


id: CL:2827
description: His Kinase A (phosphoacceptor) domain, and EAL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2827_His_Kinase_A_(phosphoacceptor)_domain,_and_EAL_domain


id: CL:2830
description: Histidine kinase domain, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2830_Histidine_kinase_domain,_and_Diguanylate_cyclase


id: CL:2833
description: Mixed, incl. PAC motif, and Double Cache domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2833_Mixed,_incl._PAC_motif,_and_Double_Cache_domain_1


id: CL:2836
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2836_Signal_transduction_histidine_kinase-related_protein,_C-terminal,_and_7TM_diverse_intracellular_signalling

description:
  Signal transduction histidine kinase-related protein, C-terminal, and 7TM diverse intracellular signalling


id: CL:2837
description: PAC motif, and Double Cache domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2837_PAC_motif,_and_Double_Cache_domain_1


id: CL:2860
description: Mixed, incl. PAS fold-3, and Double Cache domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2860_Mixed,_incl._PAS_fold-3,_and_Double_Cache_domain_1


id: CL:2871
description: 7TM diverse intracellular signalling, and Double Cache domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2871_7TM_diverse_intracellular_signalling,_and_Double_Cache_domain_1


id: CL:2899
description: HPT domain superfamily, and PAS fold
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2899_HPT_domain_superfamily,_and_PAS_fold


id: CL:2919
description: PAS fold-3, and Sodium/solute symporter
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2919_PAS_fold-3,_and_Sodium/solute_symporter


id: CL:292
description: AMP-binding, conserved site, and Domain of unknown function DUF11
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:292_AMP-binding,_conserved_site,_and_Domain_of_unknown_function_DUF11


id: CL:2998
description: Bacterial periplasmic substrate-binding proteins, and Type II/IV secretion system protein
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:2998_Bacterial_periplasmic_substrate-binding_proteins,_and_Type_II/IV_secretion_system_protein


id: CL:3016
description: OmpR/PhoB-type DNA-binding domain, and Peptidyl-histidine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3016_OmpR/PhoB-type_DNA-binding_domain,_and_Peptidyl-histidine_modification


id: CL:3018
description: OmpR/PhoB-type DNA-binding domain, and Type II secretion system protein GspE, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3018_OmpR/PhoB-type_DNA-binding_domain,_and_Type_II_secretion_system_protein_GspE,_N-terminal


id: CL:3037
description: Two-component regulatory system, and Type II secretion system protein GspE, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3037_Two-component_regulatory_system,_and_Type_II_secretion_system_protein_GspE,_N-terminal


id: CL:304
description: Mixed, incl. Oxidative phosphorylation, and Anaerobic respiration
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:304_Mixed,_incl._Oxidative_phosphorylation,_and_Anaerobic_respiration


id: CL:305
description: Oxidative phosphorylation, and Anaerobic respiration
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:305_Oxidative_phosphorylation,_and_Anaerobic_respiration


id: CL:306
description: Oxidative phosphorylation, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:306_Oxidative_phosphorylation,_and_Electron_transfer_flavoprotein_domain


id: CL:3068
description: Mixed, incl. CheW-like domain, and Demethylation
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3068_Mixed,_incl._CheW-like_domain,_and_Demethylation


id: CL:3070
description: Mixed, incl. CheW-like domain, and Chemotaxis protein methyltransferase CheR
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3070_Mixed,_incl._CheW-like_domain,_and_Chemotaxis_protein_methyltransferase_CheR


id: CL:3072
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3072_Mixed,_incl._Chemotaxis_protein_methyltransferase_CheR,_and_Protein-glutamate_methylesterase/protein-glutamine_glutaminase,_CheB_type

description:
  Mixed, incl. Chemotaxis protein methyltransferase CheR, and Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type


id: CL:308
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:308_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor,_and_Thioredoxin-like_[2Fe-2S]_ferredoxin

description:
  Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor, and Thioredoxin-like [2Fe-2S] ferredoxin


id: CL:3084
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3084_Mixed,_incl._Chemotaxis_protein_methyltransferase_CheR,_and_Protein-glutamate_methylesterase/protein-glutamine_glutaminase,_CheB_type

description:
  Mixed, incl. Chemotaxis protein methyltransferase CheR, and Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type


id: CL:310
description: Mixed, incl. Quinone binding, and Thioredoxin-like [2Fe-2S] ferredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:310_Mixed,_incl._Quinone_binding,_and_Thioredoxin-like_[2Fe-2S]_ferredoxin


id: CL:3101
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3101_Mixed,_incl._Single_cache_domain_3,_and_Putative_sensory_transducer_protein_YvaQ-like,_ligand-binding_sensor_domain

description:
  Mixed, incl. Single cache domain 3, and Putative sensory transducer protein YvaQ-like, ligand-binding sensor domain


id: CL:3117
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3117_Mixed,_incl._Chemotaxis_protein_methyltransferase_CheR,_and_Protein-glutamate_methylesterase/protein-glutamine_glutaminase,_CheB_type

description:
  Mixed, incl. Chemotaxis protein methyltransferase CheR, and Protein-glutamate methylesterase/protein-glutamine glutaminase, CheB type


id: CL:312
description: Quinone binding, and Respiratory chain complex
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:312_Quinone_binding,_and_Respiratory_chain_complex


id: CL:3145
description: CheY-P phosphatase CheX-like, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3145_CheY-P_phosphatase_CheX-like,_and_Bacterial_chemotaxis


id: CL:3165
description: Negative regulation of locomotion, and HD-GYP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3165_Negative_regulation_of_locomotion,_and_HD-GYP_domain


id: CL:3167
description: HD-GYP domain, and Diguanylate cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3167_HD-GYP_domain,_and_Diguanylate_cyclase_activity


id: CL:3204
description: RNA polymerase sigma factor 54 interaction domain, and tRNA-dihydrouridine synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3204_RNA_polymerase_sigma_factor_54_interaction_domain,_and_tRNA-dihydrouridine_synthase


id: CL:3207
description: DNA-binding transcription activator activity, and Sigma-54 interaction domain, ATP-binding site 2
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3207_DNA-binding_transcription_activator_activity,_and_Sigma-54_interaction_domain,_ATP-binding_site_2


id: CL:3266
description: Cilium, and Anti-sigma factor antagonist
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3266_Cilium,_and_Anti-sigma_factor_antagonist


id: CL:3268
description: Cilium, and FliK-like, C-terminal domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3268_Cilium,_and_FliK-like,_C-terminal_domain_superfamily


id: CL:3277
description: Bacterial-type flagellum basal body, and Bacterial flagellum protein export
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3277_Bacterial-type_flagellum_basal_body,_and_Bacterial_flagellum_protein_export


id: CL:3279
description: Cytoskeletal motor activity, and ATPase-coupled ion transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3279_Cytoskeletal_motor_activity,_and_ATPase-coupled_ion_transmembrane_transporter_activity


id: CL:3295
description: Bacterial flagellum protein export, and Bacterial-type flagellum assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3295_Bacterial_flagellum_protein_export,_and_Bacterial-type_flagellum_assembly


id: CL:3306
description: Bacterial-type flagellum basal body, distal rod, and Flagellar hook-basal body protein, FlgE/F/G
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3306_Bacterial-type_flagellum_basal_body,_distal_rod,_and_Flagellar_hook-basal_body_protein,_FlgE/F/G


id: CL:3354
description: Anti-sigma factor antagonist, and PPM-type phosphatase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3354_Anti-sigma_factor_antagonist,_and_PPM-type_phosphatase-like_domain


id: CL:338
description: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region, and Respiratory chain complex
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:338_NADH-ubiquinone_oxidoreductase-F_iron-sulfur_binding_region,_and_Respiratory_chain_complex


id: CL:3382
description: Protein serine/threonine phosphatase activity, and Forkhead associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3382_Protein_serine/threonine_phosphatase_activity,_and_Forkhead_associated_domain


id: CL:3402
description: Mixed, incl. C4-dicarboxylate transport, and Carbohydrate binding
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3402_Mixed,_incl._C4-dicarboxylate_transport,_and_Carbohydrate_binding


id: CL:3414
description: Mixed, incl. Universal stress protein A family, and FAD/NAD(P)-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3414_Mixed,_incl._Universal_stress_protein_A_family,_and_FAD/NAD(P)-binding_domain_superfamily


id: CL:3427
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3427_Mixed,_incl._Putative_MetA-pathway_of_phenol_degradation,_and_Bacterial_extracellular_solute-binding_proteins,_family_3

description:
  Mixed, incl. Putative MetA-pathway of phenol degradation, and Bacterial extracellular solute-binding proteins, family 3


id: CL:3456
description: Mixed, incl. GxxExxY protein, and Single cache domain 3
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3456_Mixed,_incl._GxxExxY_protein,_and_Single_cache_domain_3


id: CL:3468
description: Mixed, incl. Import across plasma membrane, and Ribosomal small subunit binding
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3468_Mixed,_incl._Import_across_plasma_membrane,_and_Ribosomal_small_subunit_binding


id: CL:3505
description: Mixed, incl. Regulation of locomotion, and EF-hand domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3505_Mixed,_incl._Regulation_of_locomotion,_and_EF-hand_domain


id: CL:3528
description: Mixed, incl. Lon protease (S16) C-terminal proteolytic domain, and Gas transport
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3528_Mixed,_incl._Lon_protease_(S16)_C-terminal_proteolytic_domain,_and_Gas_transport


id: CL:3558
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3558_Mixed,_incl._Organic_radical-activating_enzymes,_and_Four_helix_bundle_sensory_module_for_signal_transduction

description:
  Mixed, incl. Organic radical-activating enzymes, and Four helix bundle sensory module for signal transduction


id: CL:3567
description: Mixed, incl. TAT protein transport complex, and TatD related DNase
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3567_Mixed,_incl._TAT_protein_transport_complex,_and_TatD_related_DNase


id: CL:3568
description: Mixed, incl. TorD-like superfamily, and Prokaryotic cytochrome b561
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3568_Mixed,_incl._TorD-like_superfamily,_and_Prokaryotic_cytochrome_b561


id: CL:358
description: NADH:ubiquinone oxidoreductase, and NADH dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:358_NADH:ubiquinone_oxidoreductase,_and_NADH_dehydrogenase


id: CL:3586
description: Mixed, incl. Citrate transporter, and Nucleoside transport
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3586_Mixed,_incl._Citrate_transporter,_and_Nucleoside_transport


id: CL:3599
description: Mixed, incl. CHAT domain, and Caspase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3599_Mixed,_incl._CHAT_domain,_and_Caspase_domain


id: CL:3608
description: Mixed, incl. EamA domain, and Modified amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3608_Mixed,_incl._EamA_domain,_and_Modified_amino_acid_transport


id: CL:3621
description: Mixed, incl. Potassium transport, and Alpha amylase, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3621_Mixed,_incl._Potassium_transport,_and_Alpha_amylase,_catalytic_domain


id: CL:3624
description: P-type ion transporter activity, and Ion channel
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3624_P-type_ion_transporter_activity,_and_Ion_channel


id: CL:3644
description: Mixed, incl. Aconitase, iron-sulfur domain, and Gas transport
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3644_Mixed,_incl._Aconitase,_iron-sulfur_domain,_and_Gas_transport


id: CL:3655
description: Mixed, incl. Smr domain, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3655_Mixed,_incl._Smr_domain,_and_Tetratricopeptide_repeat


id: CL:3670
description: Mixed, incl. Protein of unknown function DUF3373, and Peptidyl-histidine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3670_Mixed,_incl._Protein_of_unknown_function_DUF3373,_and_Peptidyl-histidine_modification


id: CL:3679
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3679_Mixed,_incl._CobQ/CobB/MinD/ParA_nucleotide_binding_domain,_and_Dinitrogenase_iron-molybdenum_cofactor

description:
  Mixed, incl. CobQ/CobB/MinD/ParA nucleotide binding domain, and Dinitrogenase iron-molybdenum cofactor


id: CL:3681
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3681_Mixed,_incl._CobQ/CobB/MinD/ParA_nucleotide_binding_domain,_and_Dinitrogenase_iron-molybdenum_cofactor

description:
  Mixed, incl. CobQ/CobB/MinD/ParA nucleotide binding domain, and Dinitrogenase iron-molybdenum cofactor


id: CL:3682
description: Mixed, incl. Response to nitrosative stress, and Dinitrogenase iron-molybdenum cofactor
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3682_Mixed,_incl._Response_to_nitrosative_stress,_and_Dinitrogenase_iron-molybdenum_cofactor


id: CL:3693
description: CobQ/CobB/MinD/ParA nucleotide binding domain, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3693_CobQ/CobB/MinD/ParA_nucleotide_binding_domain,_and_Sigma-70,_region_4


id: CL:3712
description: Mostly uncharacterized, incl. Cytochrome c, class III, and Hydrogenase (acceptor) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3712_Mostly_uncharacterized,_incl._Cytochrome_c,_class_III,_and_Hydrogenase_(acceptor)_activity


id: CL:3714
description: Mixed, incl. Cytochrome c, class III, and Hydrogenase (acceptor) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3714_Mixed,_incl._Cytochrome_c,_class_III,_and_Hydrogenase_(acceptor)_activity


id: CL:3729
description: Sequence-specific DNA binding, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3729_Sequence-specific_DNA_binding,_and_Signal


id: CL:374
description: Aerobic electron transport chain, and Type 1 protein exporter
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:374_Aerobic_electron_transport_chain,_and_Type_1_protein_exporter


id: CL:3742
description: Mixed, incl. RNA 3-end processing, and Aldehyde biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3742_Mixed,_incl._RNA_3-end_processing,_and_Aldehyde_biosynthetic_process


id: CL:3758
description: Mixed, incl. Sodium:solute symporter family, and Putative nucleotidyltransferase DUF294
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3758_Mixed,_incl._Sodium:solute_symporter_family,_and_Putative_nucleotidyltransferase_DUF294


id: CL:3760
description: Sodium:solute symporter family, and Putative nucleotidyltransferase DUF294
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3760_Sodium:solute_symporter_family,_and_Putative_nucleotidyltransferase_DUF294


id: CL:3782
description: Extracellular polysaccharide metabolic process, and LysM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3782_Extracellular_polysaccharide_metabolic_process,_and_LysM_domain


id: CL:3786
description: Extracellular polysaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3786_Extracellular_polysaccharide_metabolic_process


id: CL:3805
description: Mostly uncharacterized, incl. Domain of unknown function DUF4388, and Regulation of localization
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3805_Mostly_uncharacterized,_incl._Domain_of_unknown_function_DUF4388,_and_Regulation_of_localization


id: CL:3806
description: Mostly uncharacterized, incl. Domain of unknown function DUF4388, and Host cell cytoplasm
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3806_Mostly_uncharacterized,_incl._Domain_of_unknown_function_DUF4388,_and_Host_cell_cytoplasm


id: CL:3807
description: Mixed, incl. Domain of unknown function DUF4388, and Host cell cytoplasm
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3807_Mixed,_incl._Domain_of_unknown_function_DUF4388,_and_Host_cell_cytoplasm


id: CL:3808
description: Mixed, incl. Host cell cytoplasm, and Domain of unknown function DUF4388
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3808_Mixed,_incl._Host_cell_cytoplasm,_and_Domain_of_unknown_function_DUF4388


id: CL:3809
description: Mixed, incl. Host cell cytoplasm, and Domain of unknown function DUF4388
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3809_Mixed,_incl._Host_cell_cytoplasm,_and_Domain_of_unknown_function_DUF4388


id: CL:3811
description: Mixed, incl. Host cell cytoplasm, and Ras family
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3811_Mixed,_incl._Host_cell_cytoplasm,_and_Ras_family


id: CL:3813
description: Mixed, incl. Ras family, and Tetratricopeptide repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3813_Mixed,_incl._Ras_family,_and_Tetratricopeptide_repeat


id: CL:383
description: Mixed, incl. Multiheme cytochrome superfamily, and Molybdopterin oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:383_Mixed,_incl._Multiheme_cytochrome_superfamily,_and_Molybdopterin_oxidoreductase


id: CL:3835
description: Mixed, incl. Polysaccharide transport, and Phospholipase C/D
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3835_Mixed,_incl._Polysaccharide_transport,_and_Phospholipase_C/D


id: CL:3838
description: Mixed, incl. Phospholipase C/D, and Zinc finger/thioredoxin putative
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3838_Mixed,_incl._Phospholipase_C/D,_and_Zinc_finger/thioredoxin_putative


id: CL:385
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:385_Mixed,_incl._Molybdopterin_oxidoreductase,_and_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors

description:
  Mixed, incl. Molybdopterin oxidoreductase, and Oxidoreductase activity, acting on other nitrogenous compounds as donors


id: CL:3854
description: Mixed, incl. BON domain, and Aminoacyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3854_Mixed,_incl._BON_domain,_and_Aminoacyltransferase_activity


id: CL:3863
description: Mixed, incl. Nitrogen utilization, and Pilus retraction protein PilT/PilU
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3863_Mixed,_incl._Nitrogen_utilization,_and_Pilus_retraction_protein_PilT/PilU


id: CL:387
description: Mixed, incl. 4Fe-4S binding domain, and Molybdenum ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:387_Mixed,_incl._4Fe-4S_binding_domain,_and_Molybdenum_ion_binding


id: CL:3874
description: Mostly uncharacterized, incl. Protein of unknown function DUF3373, and Resolvase, N terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3874_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF3373,_and_Resolvase,_N_terminal_domain


id: CL:3876
description: Mostly uncharacterized, incl. Protein of unknown function DUF3373, and Resolvase, N terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3876_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF3373,_and_Resolvase,_N_terminal_domain


id: CL:3877
description: Mixed, incl. Resolvase, N terminal domain, and Protein insertion into membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3877_Mixed,_incl._Resolvase,_N_terminal_domain,_and_Protein_insertion_into_membrane


id: CL:3880
description: Mixed, incl. Protein insertion into membrane, and FecR protein
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3880_Mixed,_incl._Protein_insertion_into_membrane,_and_FecR_protein


id: CL:3903
description: Mixed, incl. Protein of unknown function DUF3373, and DsrEFH-like
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3903_Mixed,_incl._Protein_of_unknown_function_DUF3373,_and_DsrEFH-like


id: CL:3927
description: Mixed, incl. NosL, and Photosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3927_Mixed,_incl._NosL,_and_Photosynthesis


id: CL:3929
description: Mixed, incl. Photosynthesis, and ER-Phagosome pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3929_Mixed,_incl._Photosynthesis,_and_ER-Phagosome_pathway


id: CL:3942
description: Mixed, incl. NosL, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3942_Mixed,_incl._NosL,_and_MacB,_ATP-binding_domain


id: CL:3953
description: Mixed, incl. Phosphate ion transport, and ATP-binding cassette (ABC) transporter complex
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3953_Mixed,_incl._Phosphate_ion_transport,_and_ATP-binding_cassette_(ABC)_transporter_complex


id: CL:3954
description: Mixed, incl. Phosphate ion transport, and Alkanesulfonate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3954_Mixed,_incl._Phosphate_ion_transport,_and_Alkanesulfonate_transport


id: CL:3956
description: Phosphate ion transport, and Binding-protein-dependent transport system inner membrane component
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3956_Phosphate_ion_transport,_and_Binding-protein-dependent_transport_system_inner_membrane_component


id: CL:3958
description: Phosphate transport, and Binding-protein-dependent transport system inner membrane component
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3958_Phosphate_transport,_and_Binding-protein-dependent_transport_system_inner_membrane_component


id: CL:3987
description: Mixed, incl. Ppx/GppA phosphatase, and Polyphosphate kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3987_Mixed,_incl._Ppx/GppA_phosphatase,_and_Polyphosphate_kinase_activity


id: CL:3988
description: Mixed, incl. PhoU-like domain superfamily, and Phosphoglycerate mutase family
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3988_Mixed,_incl._PhoU-like_domain_superfamily,_and_Phosphoglycerate_mutase_family


id: CL:3999
description: Ppx/GppA phosphatase, and Polyphosphate kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:3999_Ppx/GppA_phosphatase,_and_Polyphosphate_kinase_activity


id: CL:4009
description: Mixed, incl. Amino acid transport, and Phenylacetate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4009_Mixed,_incl._Amino_acid_transport,_and_Phenylacetate_catabolic_process


id: CL:4010
description: Mixed, incl. Amino acid transport, and Phenylacetate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4010_Mixed,_incl._Amino_acid_transport,_and_Phenylacetate_catabolic_process


id: CL:4015
description: ABC transporter, permease, and Branched-chain amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4015_ABC_transporter,_permease,_and_Branched-chain_amino_acid_transport


id: CL:4038
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4038_Mixed,_incl._Phenylacetate_catabolic_process,_and_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_iron-sulfur_protein_as_acceptor

description:
  Mixed, incl. Phenylacetate catabolic process, and Oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor


id: CL:404
description: Mixed, incl. Acetylene hydratase activity, and NrfD family
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:404_Mixed,_incl._Acetylene_hydratase_activity,_and_NrfD_family


id: CL:4053
description: Mixed, incl. Toluene degradation, and Sodium/solute symporter superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4053_Mixed,_incl._Toluene_degradation,_and_Sodium/solute_symporter_superfamily


id: CL:4066
description: Mostly uncharacterized, incl. RDD family, and ATPase, AAA-3
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4066_Mostly_uncharacterized,_incl._RDD_family,_and_ATPase,_AAA-3


id: CL:4067
description: Mixed, incl. RDD family, and ATPase, AAA-3
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4067_Mixed,_incl._RDD_family,_and_ATPase,_AAA-3


id: CL:4069
description: Mixed, incl. RDD family, and ATPase, AAA-3
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4069_Mixed,_incl._RDD_family,_and_ATPase,_AAA-3


id: CL:4097
description: Mixed, incl. Aquaporin-like, and Chemotaxis phosphatase CheX
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4097_Mixed,_incl._Aquaporin-like,_and_Chemotaxis_phosphatase_CheX


id: CL:4112
description: Mixed, incl. Conserved hypothetical protein CHP03980, redox-disulphide, and Transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4112_Mixed,_incl._Conserved_hypothetical_protein_CHP03980,_redox-disulphide,_and_Transposase_sub-family


id: CL:4122
description: Mostly uncharacterized, incl. Chromosome segregation, and Nucleus
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4122_Mostly_uncharacterized,_incl._Chromosome_segregation,_and_Nucleus


id: CL:4123
description: Mostly uncharacterized, incl. Chromosome segregation, and Nucleus
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4123_Mostly_uncharacterized,_incl._Chromosome_segregation,_and_Nucleus


id: CL:4124
description: Mixed, incl. Chromosome segregation, and Nucleus
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4124_Mixed,_incl._Chromosome_segregation,_and_Nucleus


id: CL:4127
description: Chromosome segregation, and tRNA synthetases class I (W and Y)
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4127_Chromosome_segregation,_and_tRNA_synthetases_class_I_(W_and_Y)


id: CL:4143
description: Mixed, incl. Peptide deformylase, and Uncharacterised protein family UPF0758
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4143_Mixed,_incl._Peptide_deformylase,_and_Uncharacterised_protein_family_UPF0758


id: CL:4158
description: Mixed, incl. K Homology domain, type 1, and Bacterial transcriptional regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4158_Mixed,_incl._K_Homology_domain,_type_1,_and_Bacterial_transcriptional_regulator


id: CL:4176
description: Mixed, incl. Spermidine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4176_Mixed,_incl._Spermidine_metabolic_process


id: CL:4185
description: Mixed, incl. Nitrogen fixation, and Molybdenum
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4185_Mixed,_incl._Nitrogen_fixation,_and_Molybdenum


id: CL:4187
description: Mixed, incl. Nitrogen fixation, and Molybdenum
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4187_Mixed,_incl._Nitrogen_fixation,_and_Molybdenum


id: CL:4189
description: Mixed, incl. Nitrogen fixation, and Molybdenum
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4189_Mixed,_incl._Nitrogen_fixation,_and_Molybdenum


id: CL:4190
description: Nitrogen fixation, and Ammonium/urea transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4190_Nitrogen_fixation,_and_Ammonium/urea_transporter


id: CL:4192
description: Nitrogen fixation, and Ammonium/urea transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4192_Nitrogen_fixation,_and_Ammonium/urea_transporter


id: CL:4232
description: Mixed, incl. Dinitrogenase reductase ADP-ribosyltransferase, and Nuclear lumen
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4232_Mixed,_incl._Dinitrogenase_reductase_ADP-ribosyltransferase,_and_Nuclear_lumen


id: CL:4244
description: Molybdenum, and Molybdenum cofactor biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4244_Molybdenum,_and_Molybdenum_cofactor_biosynthesis


id: CL:4246
description: Molybdenum cofactor biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4246_Molybdenum_cofactor_biosynthesis


id: CL:4279
description: Mixed, incl. Macro domain-like, and YitH, acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4279_Mixed,_incl._Macro_domain-like,_and_YitH,_acetyltransferase_(GNAT)_domain


id: CL:4289
description: Mostly uncharacterized, incl. Efflux transmembrane transporter activity, and Antiport
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4289_Mostly_uncharacterized,_incl._Efflux_transmembrane_transporter_activity,_and_Antiport


id: CL:429
description: Mixed, incl. Cytochrome complex, and histidine-tRNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:429_Mixed,_incl._Cytochrome_complex,_and_histidine-tRNA_ligase_activity


id: CL:4291
description: Mixed, incl. AAA domain, and AI-2E family transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4291_Mixed,_incl._AAA_domain,_and_AI-2E_family_transporter


id: CL:4307
description: Mixed, incl. Transporter associated domain, and Fluoride transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4307_Mixed,_incl._Transporter_associated_domain,_and_Fluoride_transmembrane_transport


id: CL:4321
description: Mixed, incl. Transmembrane transporter activity, and Immunoglobulin-like fold
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4321_Mixed,_incl._Transmembrane_transporter_activity,_and_Immunoglobulin-like_fold


id: CL:4322
description: Mixed, incl. Immunoglobulin-like fold, and Siderophore transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4322_Mixed,_incl._Immunoglobulin-like_fold,_and_Siderophore_transmembrane_transporter_activity


id: CL:4323
description: Mixed, incl. Immunoglobulin-like fold, and Siderophore transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4323_Mixed,_incl._Immunoglobulin-like_fold,_and_Siderophore_transmembrane_transporter_activity


id: CL:4324
description: Mixed, incl. Siderophore transmembrane transporter activity, and Porin activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4324_Mixed,_incl._Siderophore_transmembrane_transporter_activity,_and_Porin_activity


id: CL:4325
description: Mixed, incl. Siderophore transmembrane transporter activity, and Porin activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4325_Mixed,_incl._Siderophore_transmembrane_transporter_activity,_and_Porin_activity


id: CL:4326
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4326_Mixed,_incl._Siderophore_transmembrane_transporter_activity,_and_Six-bladed_beta-propeller,_TolB-like

description:
  Mixed, incl. Siderophore transmembrane transporter activity, and Six-bladed beta-propeller, TolB-like


id: CL:4327
description: Mixed, incl. TonB-dependent receptor-like, and NHL repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4327_Mixed,_incl._TonB-dependent_receptor-like,_and_NHL_repeat


id: CL:4328
description: TonB-dependent receptor-like, and NHL repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4328_TonB-dependent_receptor-like,_and_NHL_repeat


id: CL:4329
description: NHL repeat, and TonB dependent receptor
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4329_NHL_repeat,_and_TonB_dependent_receptor


id: CL:4340
description: TonB, C-terminal, and Outer membrane protein beta-barrel family
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4340_TonB,_C-terminal,_and_Outer_membrane_protein_beta-barrel_family


id: CL:4350
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4350_Mixed,_incl._Outer_membrane_protein_beta-barrel_family,_and_Ligase_activity,_forming_nitrogen-metal_bonds

description:
  Mixed, incl. Outer membrane protein beta-barrel family, and Ligase activity, forming nitrogen-metal bonds


id: CL:4364
description: Mixed, incl. Protein domain specific binding, and MotA/TolQ/ExbB proton channel
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4364_Mixed,_incl._Protein_domain_specific_binding,_and_MotA/TolQ/ExbB_proton_channel


id: CL:4384
description: Outer membrane protein, OmpA-like, conserved site, and Domain of unknown function DUF11
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4384_Outer_membrane_protein,_OmpA-like,_conserved_site,_and_Domain_of_unknown_function_DUF11


id: CL:4401
description: Mixed, incl. Iron ion homeostasis, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4401_Mixed,_incl._Iron_ion_homeostasis,_and_Periplasmic_binding_protein


id: CL:4402
description: Mixed, incl. Iron ion homeostasis, and GxxExxY protein
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4402_Mixed,_incl._Iron_ion_homeostasis,_and_GxxExxY_protein


id: CL:4405
description: FecCD transport family, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4405_FecCD_transport_family,_and_Periplasmic_binding_protein


id: CL:441
description: Mixed, incl. Pentose phosphate pathway, and Starch and sucrose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:441_Mixed,_incl._Pentose_phosphate_pathway,_and_Starch_and_sucrose_metabolism


id: CL:442
description: Mixed, incl. Pentose phosphate pathway, and Starch and sucrose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:442_Mixed,_incl._Pentose_phosphate_pathway,_and_Starch_and_sucrose_metabolism


id: CL:4420
description: Bacterial extracellular solute-binding protein, and Hydrogenase maturation factor HypB
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4420_Bacterial_extracellular_solute-binding_protein,_and_Hydrogenase_maturation_factor_HypB


id: CL:443
description: Pentose phosphate pathway, and Glycolytic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:443_Pentose_phosphate_pathway,_and_Glycolytic_process


id: CL:4435
description: Mixed, incl. Lysine methyltransferase, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4435_Mixed,_incl._Lysine_methyltransferase,_and_Periplasmic_binding_protein


id: CL:4446
description: Mixed, incl. Bacterial repeat domain, and Immunoglobulin E-set
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4446_Mixed,_incl._Bacterial_repeat_domain,_and_Immunoglobulin_E-set


id: CL:4448
description: Bacterial repeat domain, and Immunoglobulin E-set
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4448_Bacterial_repeat_domain,_and_Immunoglobulin_E-set


id: CL:445
description: Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:445_Pentose_phosphate_pathway,_and_Glycolysis


id: CL:4450
description: Mixed, incl. LamG-like jellyroll fold, and YD repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4450_Mixed,_incl._LamG-like_jellyroll_fold,_and_YD_repeat


id: CL:447
description: Glycolysis, and NADPH regeneration
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:447_Glycolysis,_and_NADPH_regeneration


id: CL:4478
description: Immunoglobulin E-set, and EF-Hand 1, calcium-binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4478_Immunoglobulin_E-set,_and_EF-Hand_1,_calcium-binding_site


id: CL:449
description: NADPH regeneration, and Glycolytic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:449_NADPH_regeneration,_and_Glycolytic_process


id: CL:4493
description: The GLUG motif, and 7TM diverse intracellular signalling
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4493_The_GLUG_motif,_and_7TM_diverse_intracellular_signalling


id: CL:4512
description: Mixed, incl. Galactose-binding-like domain superfamily, and Metalloprotease
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4512_Mixed,_incl._Galactose-binding-like_domain_superfamily,_and_Metalloprotease


id: CL:4527
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4527_Mixed,_incl._beta-Lactam_resistance,_and_RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain

description:
  Mixed, incl. beta-Lactam resistance, and RND efflux pump, membrane fusion protein, barrel-sandwich domain


id: CL:4529
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4529_Mixed,_incl._Efflux_transmembrane_transporter_activity,_and_RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain

description:
  Mixed, incl. Efflux transmembrane transporter activity, and RND efflux pump, membrane fusion protein, barrel-sandwich domain


id: CL:4530
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4530_Mixed,_incl._Efflux_transmembrane_transporter_activity,_and_RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain

description:
  Mixed, incl. Efflux transmembrane transporter activity, and RND efflux pump, membrane fusion protein, barrel-sandwich domain


id: CL:4531
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4531_Efflux_transmembrane_transporter_activity,_and_RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain

description:
  Efflux transmembrane transporter activity, and RND efflux pump, membrane fusion protein, barrel-sandwich domain


id: CL:4533
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4533_Efflux_transmembrane_transporter_activity,_and_RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain

description:
  Efflux transmembrane transporter activity, and RND efflux pump, membrane fusion protein, barrel-sandwich domain


id: CL:4534
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4534_Efflux_transmembrane_transporter_activity,_and_RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain

description:
  Efflux transmembrane transporter activity, and RND efflux pump, membrane fusion protein, barrel-sandwich domain


id: CL:4536
description: Efflux transmembrane transporter activity, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4536_Efflux_transmembrane_transporter_activity,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:4539
description: Hydrophobe/amphiphile efflux-1 HAE1, and Palmitate
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4539_Hydrophobe/amphiphile_efflux-1_HAE1,_and_Palmitate


id: CL:4564
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4564_Mixed,_incl._MacB-like_periplasmic_core_domain,_and_RND_efflux_pump,_membrane_fusion_protein,_barrel-sandwich_domain

description:
  Mixed, incl. MacB-like periplasmic core domain, and RND efflux pump, membrane fusion protein, barrel-sandwich domain


id: CL:4565
description: Antibiotic resistance, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4565_Antibiotic_resistance,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:4576
description: Mixed, incl. Tll0287-like, and Cation efflux system protein CusB, domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4576_Mixed,_incl._Tll0287-like,_and_Cation_efflux_system_protein_CusB,_domain_1


id: CL:4585
description: Mixed, incl. Protein export membrane protein, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4585_Mixed,_incl._Protein_export_membrane_protein,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:4602
description: Mixed, incl. MarR-type HTH domain, and Drug resistance transporter EmrB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4602_Mixed,_incl._MarR-type_HTH_domain,_and_Drug_resistance_transporter_EmrB-like


id: CL:4616
description: ABC-2 family transporter protein, and HlyD family secretion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4616_ABC-2_family_transporter_protein,_and_HlyD_family_secretion_protein


id: CL:4628
description: Mixed, incl. MamQ/LemA, and Response to pH
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4628_Mixed,_incl._MamQ/LemA,_and_Response_to_pH


id: CL:4647
description: Mixed, incl. Peptidase U32, and Vitamin catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4647_Mixed,_incl._Peptidase_U32,_and_Vitamin_catabolic_process


id: CL:4660
description: Mixed, incl. Phospholipid transport, and Response to abiotic stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4660_Mixed,_incl._Phospholipid_transport,_and_Response_to_abiotic_stimulus


id: CL:4661
description: Mixed, incl. Phospholipid transport, and Domain of unknown function DUF4398
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4661_Mixed,_incl._Phospholipid_transport,_and_Domain_of_unknown_function_DUF4398


id: CL:4663
description: Phospholipid transport, and ABC transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4663_Phospholipid_transport,_and_ABC_transporter


id: CL:4685
description: Mixed, incl. Lon protease, bacterial, and Class I glutamine amidotransferase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4685_Mixed,_incl._Lon_protease,_bacterial,_and_Class_I_glutamine_amidotransferase-like


id: CL:4701
description: Mixed, incl. MlaA lipoprotein, and Domain of unknown function DUF4398
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4701_Mixed,_incl._MlaA_lipoprotein,_and_Domain_of_unknown_function_DUF4398


id: CL:4702
description: MlaA lipoprotein, and Domain of unknown function DUF4398
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4702_MlaA_lipoprotein,_and_Domain_of_unknown_function_DUF4398


id: CL:4713
description: Mixed, incl. Virulence factor BrkB, and Mechanosensitive ion channel MscS, transmembrane-2
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4713_Mixed,_incl._Virulence_factor_BrkB,_and_Mechanosensitive_ion_channel_MscS,_transmembrane-2


id: CL:4722
description: Mixed, incl. YtxH-like protein, and Response to osmotic stress
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4722_Mixed,_incl._YtxH-like_protein,_and_Response_to_osmotic_stress


id: CL:4723
description: Mixed, incl. Response to osmotic stress, and Outer membrane protein, bacterial
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4723_Mixed,_incl._Response_to_osmotic_stress,_and_Outer_membrane_protein,_bacterial


id: CL:4736
description: Mixed, incl. YtxH-like protein, and Universal stress protein A family
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4736_Mixed,_incl._YtxH-like_protein,_and_Universal_stress_protein_A_family


id: CL:4747
description: Mixed, incl. Bacterial secretion system, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4747_Mixed,_incl._Bacterial_secretion_system,_and_Pilus_organization


id: CL:4748
description: Mixed, incl. Bacterial secretion system, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4748_Mixed,_incl._Bacterial_secretion_system,_and_Pilus_organization


id: CL:4749
description: Mixed, incl. Bacterial secretion system, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4749_Mixed,_incl._Bacterial_secretion_system,_and_Pilus_organization


id: CL:4750
description: Mixed, incl. Bacterial secretion system, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4750_Mixed,_incl._Bacterial_secretion_system,_and_Pilus_organization


id: CL:4751
description: Bacterial secretion system, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4751_Bacterial_secretion_system,_and_Pilus_organization


id: CL:4752
description: Bacterial secretion system, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4752_Bacterial_secretion_system,_and_Pilus_organization


id: CL:4753
description: Bacterial secretion system, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4753_Bacterial_secretion_system,_and_Pilus_organization


id: CL:4754
description: Bacterial secretion system, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4754_Bacterial_secretion_system,_and_Pilus_organization


id: CL:4755
description: Bacterial secretion system, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4755_Bacterial_secretion_system,_and_Pilus_organization


id: CL:4756
description: Mixed, incl. Pilus organization, and NolW-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4756_Mixed,_incl._Pilus_organization,_and_NolW-like_superfamily


id: CL:4773
description: Type II/IV secretion system protein, and GspF/PilC family
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4773_Type_II/IV_secretion_system_protein,_and_GspF/PilC_family


id: CL:4785
description: Mixed, incl. Prokaryotic N-terminal methylation site, and GspF/PilC family
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4785_Mixed,_incl._Prokaryotic_N-terminal_methylation_site,_and_GspF/PilC_family


id: CL:4797
description: Prokaryotic N-terminal methylation site, and Concanavalin A-like lectin/glucanases superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4797_Prokaryotic_N-terminal_methylation_site,_and_Concanavalin_A-like_lectin/glucanases_superfamily


id: CL:4807
description: Mixed, incl. Modulation by symbiont of host intracellular transport, and GspF/PilC family
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4807_Mixed,_incl._Modulation_by_symbiont_of_host_intracellular_transport,_and_GspF/PilC_family


id: CL:4820
description: Mixed, incl. Fn3 associated, and Fimbrial assembly protein (PilN)
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4820_Mixed,_incl._Fn3_associated,_and_Fimbrial_assembly_protein_(PilN)


id: CL:4829
description: Mixed, incl. Prokaryotic N-terminal methylation site, and Pilus
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4829_Mixed,_incl._Prokaryotic_N-terminal_methylation_site,_and_Pilus


id: CL:4833
description: Prokaryotic N-terminal methylation site, and Pilus
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4833_Prokaryotic_N-terminal_methylation_site,_and_Pilus


id: CL:4853
description: Mixed, incl. Magnesium-chelatase subunit ChlI-like, and Horizontal gene transfer
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4853_Mixed,_incl._Magnesium-chelatase_subunit_ChlI-like,_and_Horizontal_gene_transfer


id: CL:4854
description: Magnesium-chelatase subunit ChlI-like, and Horizontal gene transfer
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4854_Magnesium-chelatase_subunit_ChlI-like,_and_Horizontal_gene_transfer


id: CL:4865
description: Mixed, incl. DNA integration, and Regulation of pH
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4865_Mixed,_incl._DNA_integration,_and_Regulation_of_pH


id: CL:4880
description: Mixed, incl. NUDIX hydrolase, and Pilus retraction protein PilT/PilU
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4880_Mixed,_incl._NUDIX_hydrolase,_and_Pilus_retraction_protein_PilT/PilU


id: CL:4892
description: Mixed, incl. Papain-like cysteine peptidase superfamily, and Nucleoside transport
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4892_Mixed,_incl._Papain-like_cysteine_peptidase_superfamily,_and_Nucleoside_transport


id: CL:4895
description: Mixed, incl. Nucleoside transport, and Nucleotidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4895_Mixed,_incl._Nucleoside_transport,_and_Nucleotidase_activity


id: CL:4916
description: Mixed, incl. NusB family, and PHP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4916_Mixed,_incl._NusB_family,_and_PHP_domain


id: CL:4926
description: Mixed, incl. Tetrapyrrole metabolic process, and Protein-containing complex assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4926_Mixed,_incl._Tetrapyrrole_metabolic_process,_and_Protein-containing_complex_assembly


id: CL:4927
description: Mixed, incl. Tetrapyrrole metabolic process, and NADPH-dependent FMN reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4927_Mixed,_incl._Tetrapyrrole_metabolic_process,_and_NADPH-dependent_FMN_reductase


id: CL:4928
description: Tetrapyrrole metabolic process, and Cytochrome complex assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4928_Tetrapyrrole_metabolic_process,_and_Cytochrome_complex_assembly


id: CL:4929
description: Tetrapyrrole metabolic process, and Cytochrome complex assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4929_Tetrapyrrole_metabolic_process,_and_Cytochrome_complex_assembly


id: CL:4931
description: Cobalamin metabolic process, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4931_Cobalamin_metabolic_process,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:4932
description: Cobalamin metabolic process, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4932_Cobalamin_metabolic_process,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:4936
description: Tetrapyrrole methylase, and Cobalamin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4936_Tetrapyrrole_methylase,_and_Cobalamin_metabolic_process


id: CL:4956
description: Cobalt ion transport, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4956_Cobalt_ion_transport,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:498
description: Glycogen biosynthesis, and Carbohydrate phosphorylase
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:498_Glycogen_biosynthesis,_and_Carbohydrate_phosphorylase


id: CL:4983
description: Porphyrin biosynthesis, and Cytochrome c assembly protein
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:4983_Porphyrin_biosynthesis,_and_Cytochrome_c_assembly_protein


id: CL:5006
description: Mixed, incl. PUA domain, and Cytochrome c-552/4
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5006_Mixed,_incl._PUA_domain,_and_Cytochrome_c-552/4


id: CL:5016
description: Mixed, incl. NADPH-dependent FMN reductase, and Tetracyclin repressor-like, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5016_Mixed,_incl._NADPH-dependent_FMN_reductase,_and_Tetracyclin_repressor-like,_C-terminal_domain


id: CL:5017
description: Mixed, incl. Alanine transport, and Tetracyclin repressor-like, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5017_Mixed,_incl._Alanine_transport,_and_Tetracyclin_repressor-like,_C-terminal_domain


id: CL:5019
description: Mixed, incl. Epoxyqueuosine reductase activity, and NADPH-dependent FMN reductase
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5019_Mixed,_incl._Epoxyqueuosine_reductase_activity,_and_NADPH-dependent_FMN_reductase


id: CL:5042
description: Mixed, incl. NADPH-dependent FMN reductase, and Nitroreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5042_Mixed,_incl._NADPH-dependent_FMN_reductase,_and_Nitroreductase


id: CL:5045
description: NADPH-dependent FMN reductase, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5045_NADPH-dependent_FMN_reductase,_and_4Fe-4S_dicluster_domain


id: CL:5056
description: Mixed, incl. Cytochrome C biogenesis protein transmembrane region, and AhpD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5056_Mixed,_incl._Cytochrome_C_biogenesis_protein_transmembrane_region,_and_AhpD-like


id: CL:5070
description: Mixed, incl. Paraquat-inducible protein A, and Identical protein binding
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5070_Mixed,_incl._Paraquat-inducible_protein_A,_and_Identical_protein_binding


id: CL:5072
description: Paraquat-inducible protein A, and Mce/MlaD
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5072_Paraquat-inducible_protein_A,_and_Mce/MlaD


id: CL:5086
description: Mixed, incl. Protein serine kinase activity, and Mechanosensitive ion channel MscS, transmembrane-2
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5086_Mixed,_incl._Protein_serine_kinase_activity,_and_Mechanosensitive_ion_channel_MscS,_transmembrane-2


id: CL:5101
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5101_Mixed,_incl._DNA-binding_transcription_factor_activity,_and_Chlorocyclohexane_and_chlorobenzene_degradation

description:
  Mixed, incl. DNA-binding transcription factor activity, and Chlorocyclohexane and chlorobenzene degradation


id: CL:5102
description: Mixed, incl. DNA binding HTH domain, AraC-type, and Cellular aldehyde metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5102_Mixed,_incl._DNA_binding_HTH_domain,_AraC-type,_and_Cellular_aldehyde_metabolic_process


id: CL:5103
description: Mixed, incl. DNA binding HTH domain, AraC-type, and Aldo/keto reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5103_Mixed,_incl._DNA_binding_HTH_domain,_AraC-type,_and_Aldo/keto_reductase_family


id: CL:5104
description: Mixed, incl. Aldo/keto reductase family, and DNA binding HTH domain, AraC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5104_Mixed,_incl._Aldo/keto_reductase_family,_and_DNA_binding_HTH_domain,_AraC-type


id: CL:5107
description: Mixed, incl. YaeB-like, and Isochorismatase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5107_Mixed,_incl._YaeB-like,_and_Isochorismatase-like


id: CL:5122
description: Mixed, incl. Aldo/keto reductase family, and MarR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5122_Mixed,_incl._Aldo/keto_reductase_family,_and_MarR-type_HTH_domain


id: CL:513
description: Amino acid salvage, and Monosaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:513_Amino_acid_salvage,_and_Monosaccharide_metabolic_process


id: CL:5135
description: Mixed, incl. Antioxidant, and SnoaL-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5135_Mixed,_incl._Antioxidant,_and_SnoaL-like_domain


id: CL:5148
description: DNA-binding HTH domain, TetR-type, and Butanol dehydrogenase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5148_DNA-binding_HTH_domain,_TetR-type,_and_Butanol_dehydrogenase-like


id: CL:5157
description: Mixed, incl. RNA polymerase sigma-70 like, and L-2-Haloacid dehalogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5157_Mixed,_incl._RNA_polymerase_sigma-70_like,_and_L-2-Haloacid_dehalogenase


id: CL:5158
description: Mixed, incl. L-2-Haloacid dehalogenase, and Putative MFS transporter YjiJ
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5158_Mixed,_incl._L-2-Haloacid_dehalogenase,_and_Putative_MFS_transporter_YjiJ


id: CL:5160
description: Mixed, incl. Establishment of competence for transformation, and RNA polymerase sigma-70 like
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5160_Mixed,_incl._Establishment_of_competence_for_transformation,_and_RNA_polymerase_sigma-70_like


id: CL:5177
description: Mixed, incl. Sigma-70, region 4, and Zinc-finger
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5177_Mixed,_incl._Sigma-70,_region_4,_and_Zinc-finger


id: CL:5188
description: L,L-diaminopimelate aminotransferase activity, and Transposase, IS116/IS110/IS902
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5188_L,L-diaminopimelate_aminotransferase_activity,_and_Transposase,_IS116/IS110/IS902


id: CL:5204
description: Mostly uncharacterized, incl. Protein lipoylation, and tRNA wobble uridine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5204_Mostly_uncharacterized,_incl._Protein_lipoylation,_and_tRNA_wobble_uridine_modification


id: CL:5205
description: Mixed, incl. Protein lipoylation, and tRNA wobble uridine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5205_Mixed,_incl._Protein_lipoylation,_and_tRNA_wobble_uridine_modification


id: CL:5207
description: Mixed, incl. Protein lipoylation, and Sulfur amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5207_Mixed,_incl._Protein_lipoylation,_and_Sulfur_amino_acid_transport


id: CL:5233
description: Mixed, incl. HIT domain, and Mechanosensitive ion channel MscS, transmembrane-2
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5233_Mixed,_incl._HIT_domain,_and_Mechanosensitive_ion_channel_MscS,_transmembrane-2


id: CL:524
description: Mixed, incl. Cellular amino acid metabolic process, and Nucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:524_Mixed,_incl._Cellular_amino_acid_metabolic_process,_and_Nucleoside_monophosphate_metabolic_process


id: CL:525
description: Cellular amino acid metabolic process, and Nucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:525_Cellular_amino_acid_metabolic_process,_and_Nucleoside_monophosphate_metabolic_process


id: CL:5252
description: Mixed, incl. Oxidoreductase activity, acting on hydrogen as donor, and Response to host
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5252_Mixed,_incl._Oxidoreductase_activity,_acting_on_hydrogen_as_donor,_and_Response_to_host


id: CL:5253
description: Mixed, incl. Oxidoreductase activity, acting on hydrogen as donor, and Response to host
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5253_Mixed,_incl._Oxidoreductase_activity,_acting_on_hydrogen_as_donor,_and_Response_to_host


id: CL:5254
description: Mixed, incl. Oxidoreductase activity, acting on hydrogen as donor, and Protein maturation
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5254_Mixed,_incl._Oxidoreductase_activity,_acting_on_hydrogen_as_donor,_and_Protein_maturation


id: CL:5255
description: Mixed, incl. Oxidoreductase activity, acting on hydrogen as donor, and Protein maturation
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5255_Mixed,_incl._Oxidoreductase_activity,_acting_on_hydrogen_as_donor,_and_Protein_maturation


id: CL:5256
description: Mixed, incl. Oxidoreductase activity, acting on hydrogen as donor, and Protein maturation
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5256_Mixed,_incl._Oxidoreductase_activity,_acting_on_hydrogen_as_donor,_and_Protein_maturation


id: CL:5257
description: Protein maturation, and Nitrotoluene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5257_Protein_maturation,_and_Nitrotoluene_degradation


id: CL:526
description: Cellular amino acid metabolic process, and Ribonucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:526_Cellular_amino_acid_metabolic_process,_and_Ribonucleoside_monophosphate_metabolic_process


id: CL:527
description: Alpha-amino acid metabolic process, and Ribonucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:527_Alpha-amino_acid_metabolic_process,_and_Ribonucleoside_monophosphate_metabolic_process


id: CL:5275
description: ATPase complex, and Protein maturation
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5275_ATPase_complex,_and_Protein_maturation


id: CL:528
description: Glutamine family amino acid biosynthetic process, and Glycine, serine and threonine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:528_Glutamine_family_amino_acid_biosynthetic_process,_and_Glycine,_serine_and_threonine_metabolism


id: CL:5286
description: Mixed, incl. NADH metabolic process, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5286_Mixed,_incl._NADH_metabolic_process,_and_4Fe-4S_dicluster_domain


id: CL:5288
description: Mixed, incl. 4Fe-4S dicluster domain, and Methanogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5288_Mixed,_incl._4Fe-4S_dicluster_domain,_and_Methanogenesis


id: CL:530
description: Arginine biosynthetic process, and Lysine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:530_Arginine_biosynthetic_process,_and_Lysine_biosynthetic_process


id: CL:5302
description: NADH metabolic process, and Peptidase A31 family
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5302_NADH_metabolic_process,_and_Peptidase_A31_family


id: CL:5312
description: YhcG, N-terminal, and HAD superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5312_YhcG,_N-terminal,_and_HAD_superfamily


id: CL:5322
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5322_Mixed,_incl._Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen,_and_DNA-binding_transcriptional_activator_AlpA

description:
  Mixed, incl. Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, and DNA-binding transcriptional activator AlpA


id: CL:5333
description: Mixed, incl. Response to host, and Sulfate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5333_Mixed,_incl._Response_to_host,_and_Sulfate_transport


id: CL:5335
description: Response to host defenses, and Sulfate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5335_Response_to_host_defenses,_and_Sulfate_transport


id: CL:5337
description: Regulator of chromosome condensation, RCC1, and Sulfate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5337_Regulator_of_chromosome_condensation,_RCC1,_and_Sulfate_transport


id: CL:5357
description: Mixed, incl. Negative regulation of growth, and Plasmid maintenance
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5357_Mixed,_incl._Negative_regulation_of_growth,_and_Plasmid_maintenance


id: CL:5359
description: Mixed, incl. Plasmid maintenance, and Negative regulation of growth
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5359_Mixed,_incl._Plasmid_maintenance,_and_Negative_regulation_of_growth


id: CL:5378
description: Mixed, incl. TatD related DNase, and Dimeric alpha-beta barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5378_Mixed,_incl._TatD_related_DNase,_and_Dimeric_alpha-beta_barrel


id: CL:5387
description: Mixed, incl. Ferritin-like, and Peroxidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5387_Mixed,_incl._Ferritin-like,_and_Peroxidase_activity


id: CL:5390
description: Mixed, incl. Rubredoxin-like domain, and Cytidylate kinase-like family
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5390_Mixed,_incl._Rubredoxin-like_domain,_and_Cytidylate_kinase-like_family


id: CL:5407
description: Mixed, incl. RNA polymerase binding, and Response to nitrosative stress
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5407_Mixed,_incl._RNA_polymerase_binding,_and_Response_to_nitrosative_stress


id: CL:5416
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5416_Mostly_uncharacterized,_incl._Lambda_repressor-like,_DNA-binding_domain_superfamily,_and_Protein_transmembrane_transport

description:
  Mostly uncharacterized, incl. Lambda repressor-like, DNA-binding domain superfamily, and Protein transmembrane transport


id: CL:5417
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5417_Mostly_uncharacterized,_incl._Lambda_repressor-like,_DNA-binding_domain_superfamily,_and_Protein_transmembrane_transport

description:
  Mostly uncharacterized, incl. Lambda repressor-like, DNA-binding domain superfamily, and Protein transmembrane transport


id: CL:5418
description: Mostly uncharacterized, incl. Integrase, catalytic domain, and Response to copper ion
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5418_Mostly_uncharacterized,_incl._Integrase,_catalytic_domain,_and_Response_to_copper_ion


id: CL:5419
description: Mostly uncharacterized, incl. Response to copper ion, and Protein transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5419_Mostly_uncharacterized,_incl._Response_to_copper_ion,_and_Protein_transmembrane_transport


id: CL:5420
description: Mostly uncharacterized, incl. Response to copper ion, and Protein transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5420_Mostly_uncharacterized,_incl._Response_to_copper_ion,_and_Protein_transmembrane_transport


id: CL:5423
description: Mixed, incl. Response to copper ion, and Peptidoglycan muralytic activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5423_Mixed,_incl._Response_to_copper_ion,_and_Peptidoglycan_muralytic_activity


id: CL:5427
description: Mixed, incl. Peptidoglycan muralytic activity, and Protein transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5427_Mixed,_incl._Peptidoglycan_muralytic_activity,_and_Protein_transmembrane_transport


id: CL:5430
description: Mixed, incl. Protein transport across the cell outer membrane, and Protein transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5430_Mixed,_incl._Protein_transport_across_the_cell_outer_membrane,_and_Protein_transmembrane_transport


id: CL:5456
description: Mixed, incl. Protein transport across the cell outer membrane, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5456_Mixed,_incl._Protein_transport_across_the_cell_outer_membrane,_and_Signal


id: CL:5458
description: Protein transport across the cell outer membrane, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5458_Protein_transport_across_the_cell_outer_membrane,_and_Signal


id: CL:5500
description: Mostly uncharacterized, incl. TSCPD domain, and Zinc finger, CHC2-type
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5500_Mostly_uncharacterized,_incl._TSCPD_domain,_and_Zinc_finger,_CHC2-type


id: CL:5501
description: Mixed, incl. TSCPD domain, and Zinc finger, CHC2-type
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5501_Mixed,_incl._TSCPD_domain,_and_Zinc_finger,_CHC2-type


id: CL:5512
description: Mixed, incl. PD-(D/E)XK endonuclease-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5512_Mixed,_incl._PD-(D/E)XK_endonuclease-like_domain_superfamily


id: CL:553
description: Lysine biosynthesis, and ACT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:553_Lysine_biosynthesis,_and_ACT_domain


id: CL:5533
description: Mixed, incl. HipA-like, C-terminal, and Cro/C1-type helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5533_Mixed,_incl._HipA-like,_C-terminal,_and_Cro/C1-type_helix-turn-helix_domain


id: CL:5534
description: Mixed, incl. HipA-like, C-terminal, and Cro/C1-type helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5534_Mixed,_incl._HipA-like,_C-terminal,_and_Cro/C1-type_helix-turn-helix_domain


id: CL:5536
description: Mixed, incl. dUMP metabolic process, and Putative zinc- or iron-chelating domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5536_Mixed,_incl._dUMP_metabolic_process,_and_Putative_zinc-_or_iron-chelating_domain


id: CL:5553
description: HipA-like, C-terminal, and Cro/C1-type helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5553_HipA-like,_C-terminal,_and_Cro/C1-type_helix-turn-helix_domain


id: CL:5565
description: Mixed, incl. Band 7 domain, and dGTP catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5565_Mixed,_incl._Band_7_domain,_and_dGTP_catabolic_process


id: CL:5574
description: Mixed, incl. Acetyltransferase (GNAT) family, and Cis-trans isomerase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5574_Mixed,_incl._Acetyltransferase_(GNAT)_family,_and_Cis-trans_isomerase_activity


id: CL:5585
description: Mixed, incl. Radical SAM, alpha/beta horseshoe, and Nucleus
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5585_Mixed,_incl._Radical_SAM,_alpha/beta_horseshoe,_and_Nucleus


id: CL:5587
description: Mixed, incl. Radical SAM, alpha/beta horseshoe, and HSP20-like chaperone
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5587_Mixed,_incl._Radical_SAM,_alpha/beta_horseshoe,_and_HSP20-like_chaperone


id: CL:5588
description: Mixed, incl. Cobalamin (vitamin B12)-binding domain, and HSP20-like chaperone
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5588_Mixed,_incl._Cobalamin_(vitamin_B12)-binding_domain,_and_HSP20-like_chaperone


id: CL:5589
description: Mixed, incl. Cobalamin (vitamin B12)-binding domain, and 4-vinyl reductase, 4VR
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5589_Mixed,_incl._Cobalamin_(vitamin_B12)-binding_domain,_and_4-vinyl_reductase,_4VR


id: CL:5591
description: Cobalamin (vitamin B12)-binding domain, and 4-vinyl reductase, 4VR
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5591_Cobalamin_(vitamin_B12)-binding_domain,_and_4-vinyl_reductase,_4VR


id: CL:5605
description: Mixed, incl. Cobalamin binding, and Thioesterase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5605_Mixed,_incl._Cobalamin_binding,_and_Thioesterase_domain


id: CL:5617
description: Mixed, incl. HSP20-like chaperone, and Lon protease, bacterial
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5617_Mixed,_incl._HSP20-like_chaperone,_and_Lon_protease,_bacterial


id: CL:5629
description: Mixed, incl. rRNA (guanine) methyltransferase activity, and Sugar (and other) transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5629_Mixed,_incl._rRNA_(guanine)_methyltransferase_activity,_and_Sugar_(and_other)_transporter


id: CL:5644
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5644_Mixed,_incl._Outer_membrane_protein_beta-barrel_domain,_and_protein-N(PI)-phosphohistidine-sugar_phosphotransferase_activity

description:
  Mixed, incl. Outer membrane protein beta-barrel domain, and protein-N(PI)-phosphohistidine-sugar phosphotransferase activity


id: CL:5657
description: Mixed, incl. Immunoglobulin-like fold, and Response to pH
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5657_Mixed,_incl._Immunoglobulin-like_fold,_and_Response_to_pH


id: CL:5658
description: Mixed, incl. Immunoglobulin-like fold, and Response to pH
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5658_Mixed,_incl._Immunoglobulin-like_fold,_and_Response_to_pH


id: CL:5659
description: Mixed, incl. Response to pH, and Transporter associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5659_Mixed,_incl._Response_to_pH,_and_Transporter_associated_domain


id: CL:5670
description: Mixed, incl. ODP domain, and Outer membrane protein/outer membrane enzyme PagP, beta-barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5670_Mixed,_incl._ODP_domain,_and_Outer_membrane_protein/outer_membrane_enzyme_PagP,_beta-barrel


id: CL:5680
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5680_Mixed,_incl._Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen,_and_Putative_zinc-_or_iron-chelating_domain

description:
  Mixed, incl. Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen, and Putative zinc- or iron-chelating domain


id: CL:5698
description: Mixed, incl. Toluene degradation, and Glycerolipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5698_Mixed,_incl._Toluene_degradation,_and_Glycerolipid_metabolism


id: CL:5714
description: Lipoprotein localization to membrane, and Sterol-sensing domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5714_Lipoprotein_localization_to_membrane,_and_Sterol-sensing_domain


id: CL:572
description: Alpha-amino acid catabolic process, and Alanine, aspartate and glutamate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:572_Alpha-amino_acid_catabolic_process,_and_Alanine,_aspartate_and_glutamate_metabolism


id: CL:5723
description: Mixed, incl. Integration host factor, alpha subunit, and Phosphorylase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5723_Mixed,_incl._Integration_host_factor,_alpha_subunit,_and_Phosphorylase_superfamily


id: CL:5725
description: Mixed, incl. Phosphorylase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5725_Mixed,_incl._Phosphorylase_superfamily


id: CL:574
description: Glycine catabolic process, and Glutamate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:574_Glycine_catabolic_process,_and_Glutamate_metabolic_process


id: CL:5743
description: Mixed, incl. Multi antimicrobial extrusion protein, and HNH nuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5743_Mixed,_incl._Multi_antimicrobial_extrusion_protein,_and_HNH_nuclease


id: CL:5745
description: Mixed, incl. MatE, and HNH nuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5745_Mixed,_incl._MatE,_and_HNH_nuclease


id: CL:576
description: Glutamate metabolic process, and Glutamate dehydrogenase [NAD(P)+] activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:576_Glutamate_metabolic_process,_and_Glutamate_dehydrogenase_[NAD(P)+]_activity


id: CL:5772
description: Mixed, incl. Inorganic anion transmembrane transport, and LysR, substrate-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5772_Mixed,_incl._Inorganic_anion_transmembrane_transport,_and_LysR,_substrate-binding


id: CL:5774
description: Mixed, incl. LysR, substrate-binding, and Gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5774_Mixed,_incl._LysR,_substrate-binding,_and_Gated_channel_activity


id: CL:5804
description: Mostly uncharacterized, incl. Identical protein binding, and MamQ/LemA
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5804_Mostly_uncharacterized,_incl._Identical_protein_binding,_and_MamQ/LemA


id: CL:5805
description: Mostly uncharacterized, incl. MamQ/LemA, and Photosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5805_Mostly_uncharacterized,_incl._MamQ/LemA,_and_Photosynthesis


id: CL:5806
description: FlgT, N-terminal domain superfamily, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5806_FlgT,_N-terminal_domain_superfamily,_and_Signal


id: CL:5817
description: Mixed, incl. MamQ/LemA, and Photosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5817_Mixed,_incl._MamQ/LemA,_and_Photosynthesis


id: CL:5827
description: Mixed, incl. Response to UV, and Heparin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5827_Mixed,_incl._Response_to_UV,_and_Heparin_binding


id: CL:5841
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5841_Mixed,_incl._Dinitrogenase_iron-molybdenum_cofactor_biosynthesis_superfamily,_and_Sigma-54_interaction_domain,_conserved_site

description:
  Mixed, incl. Dinitrogenase iron-molybdenum cofactor biosynthesis superfamily, and Sigma-54 interaction domain, conserved site


id: CL:5852
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5852_Mostly_uncharacterized,_incl._Tetratricopeptide-like_helical_domain_superfamily,_and_Biological_process_involved_in_interspecies_interaction_between_organisms

description:
  Mostly uncharacterized, incl. Tetratricopeptide-like helical domain superfamily, and Biological process involved in interspecies interaction between organisms


id: CL:5853
description: Mostly uncharacterized, incl. Sel1-like repeat, and Outer membrane-bounded periplasmic space
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5853_Mostly_uncharacterized,_incl._Sel1-like_repeat,_and_Outer_membrane-bounded_periplasmic_space


id: CL:5854
description: Mostly uncharacterized, incl. Response to virus, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5854_Mostly_uncharacterized,_incl._Response_to_virus,_and_Sigma-70,_region_4


id: CL:5855
description: Mostly uncharacterized, incl. Response to virus, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5855_Mostly_uncharacterized,_incl._Response_to_virus,_and_Sigma-70,_region_4


id: CL:5857
description: Mixed, incl. Response to virus, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5857_Mixed,_incl._Response_to_virus,_and_Sigma-70,_region_4


id: CL:5869
description: Mixed, incl. Amidohydrolase-related, and Papain-like cysteine peptidase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5869_Mixed,_incl._Amidohydrolase-related,_and_Papain-like_cysteine_peptidase_superfamily


id: CL:5880
description: Mixed, incl. Anaerobic sulphatase maturase, radical SAM
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5880_Mixed,_incl._Anaerobic_sulphatase_maturase,_radical_SAM


id: CL:5891
description: Mixed, incl. Sel1-like repeat, and AMMECR1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5891_Mixed,_incl._Sel1-like_repeat,_and_AMMECR1_domain


id: CL:5893
description: Mixed, incl. Domain of unknown function DUF4124, and Restriction endonuclease type II-like
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5893_Mixed,_incl._Domain_of_unknown_function_DUF4124,_and_Restriction_endonuclease_type_II-like


id: CL:5905
description: Sel1-like repeat, and AMMECR1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5905_Sel1-like_repeat,_and_AMMECR1_domain


id: CL:5916
description: Mixed, incl. Xylanase activity, and Metalloendopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5916_Mixed,_incl._Xylanase_activity,_and_Metalloendopeptidase_activity


id: CL:5929
description: Mixed, incl. Nuclease activity, and DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5929_Mixed,_incl._Nuclease_activity,_and_DNA_binding


id: CL:5930
description: Mixed, incl. Nuclease activity, and DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5930_Mixed,_incl._Nuclease_activity,_and_DNA_binding


id: CL:5931
description: Mostly uncharacterized, incl. PIN domain, and Toxin-antitoxin complex
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5931_Mostly_uncharacterized,_incl._PIN_domain,_and_Toxin-antitoxin_complex


id: CL:5933
description: Mixed, incl. PIN domain, and YefM-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5933_Mixed,_incl._PIN_domain,_and_YefM-like_superfamily


id: CL:5934
description: Mixed, incl. PIN domain, and Ribbon-helix-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5934_Mixed,_incl._PIN_domain,_and_Ribbon-helix-helix


id: CL:5935
description: Mixed, incl. PIN domain, and Antitoxin Phd_YefM, type II toxin-antitoxin system
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5935_Mixed,_incl._PIN_domain,_and_Antitoxin_Phd_YefM,_type_II_toxin-antitoxin_system


id: CL:5936
description: Mixed, incl. PIN domain, and Antitoxin Phd_YefM, type II toxin-antitoxin system
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5936_Mixed,_incl._PIN_domain,_and_Antitoxin_Phd_YefM,_type_II_toxin-antitoxin_system


id: CL:5938
description: Mixed, incl. Toxin, and Arc-type ribbon-helix-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5938_Mixed,_incl._Toxin,_and_Arc-type_ribbon-helix-helix


id: CL:5940
description: Toxin, and Arc-type ribbon-helix-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5940_Toxin,_and_Arc-type_ribbon-helix-helix


id: CL:5975
description: Mixed, incl. ABC transporter Uup, C-terminal, and VapC-like Sll0205 protein, PIN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5975_Mixed,_incl._ABC_transporter_Uup,_C-terminal,_and_VapC-like_Sll0205_protein,_PIN_domain


id: CL:5984
description: Mixed, incl. Ribbon-helix-helix, and Toxin HigB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5984_Mixed,_incl._Ribbon-helix-helix,_and_Toxin_HigB-like


id: CL:5997
description: Mixed, incl. Purine nucleobase metabolic process, and YggU-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5997_Mixed,_incl._Purine_nucleobase_metabolic_process,_and_YggU-like_superfamily


id: CL:5999
description: Hypoxanthine catabolic process, and 2Fe-2S ferredoxin, iron-sulphur binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:5999_Hypoxanthine_catabolic_process,_and_2Fe-2S_ferredoxin,_iron-sulphur_binding_site


id: CL:6028
description: Mixed, incl. Ligase activity, forming phosphoric ester bonds, and Von Willebrand factor, type A
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6028_Mixed,_incl._Ligase_activity,_forming_phosphoric_ester_bonds,_and_Von_Willebrand_factor,_type_A


id: CL:6029
description: Mixed, incl. Ligase activity, forming phosphoric ester bonds, and Von Willebrand factor, type A
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6029_Mixed,_incl._Ligase_activity,_forming_phosphoric_ester_bonds,_and_Von_Willebrand_factor,_type_A


id: CL:6031
description: Mixed, incl. Ligase activity, forming phosphoric ester bonds, and Von Willebrand factor, type A
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6031_Mixed,_incl._Ligase_activity,_forming_phosphoric_ester_bonds,_and_Von_Willebrand_factor,_type_A


id: CL:6033
description: Mixed, incl. DNA ligase (ATP) activity, and Von Willebrand factor, type A
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6033_Mixed,_incl._DNA_ligase_(ATP)_activity,_and_Von_Willebrand_factor,_type_A


id: CL:6059
description: Mixed, incl. DNA ligase (ATP) activity, and Regulation of polysaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6059_Mixed,_incl._DNA_ligase_(ATP)_activity,_and_Regulation_of_polysaccharide_metabolic_process


id: CL:606
description: Threonine catabolic process, and 8-amino-7-oxononanoate synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:606_Threonine_catabolic_process,_and_8-amino-7-oxononanoate_synthase_activity


id: CL:6074
description: Mixed, incl. DNA modification, and Fido-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6074_Mixed,_incl._DNA_modification,_and_Fido-like_domain_superfamily


id: CL:6076
description: Mixed, incl. DNA modification, and Fido-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6076_Mixed,_incl._DNA_modification,_and_Fido-like_domain_superfamily


id: CL:6077
description: Mixed, incl. DNA modification, and Fido-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6077_Mixed,_incl._DNA_modification,_and_Fido-like_domain_superfamily


id: CL:6078
description: Mixed, incl. DNA modification, and Virulence protein RhuM-like
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6078_Mixed,_incl._DNA_modification,_and_Virulence_protein_RhuM-like


id: CL:6080
description: DNA modification, and Virulence protein RhuM-like
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6080_DNA_modification,_and_Virulence_protein_RhuM-like


id: CL:6108
description: Mixed, incl. DNA restriction-modification system, and ATPase, dynein-related, AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6108_Mixed,_incl._DNA_restriction-modification_system,_and_ATPase,_dynein-related,_AAA_domain


id: CL:6127
description: Mixed, incl. Fido-like domain superfamily, and AAA domain, group 14
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6127_Mixed,_incl._Fido-like_domain_superfamily,_and_AAA_domain,_group_14


id: CL:6140
description: Mixed, incl. Protein of unknown function DUF748, and Methylthiotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6140_Mixed,_incl._Protein_of_unknown_function_DUF748,_and_Methylthiotransferase


id: CL:615
description: Ribonucleoside monophosphate metabolic process, and One-carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:615_Ribonucleoside_monophosphate_metabolic_process,_and_One-carbon_metabolism


id: CL:6154
description: Mixed, incl. Double-strand break repair, and DDE transposase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6154_Mixed,_incl._Double-strand_break_repair,_and_DDE_transposase_sub-family


id: CL:6156
description: Mixed, incl. Double-strand break repair
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6156_Mixed,_incl._Double-strand_break_repair


id: CL:616
description: Purine nucleoside monophosphate biosynthetic process, and One-carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:616_Purine_nucleoside_monophosphate_biosynthetic_process,_and_One-carbon_metabolism


id: CL:6178
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6178_Mixed,_incl._Toxin-antitoxin_system,_RelE/ParE_toxin_domain_superfamily,_and_Antitoxin_Phd_YefM,_type_II_toxin-antitoxin_system

description:
  Mixed, incl. Toxin-antitoxin system, RelE/ParE toxin domain superfamily, and Antitoxin Phd_YefM, type II toxin-antitoxin system


id: CL:6179
description: Mixed, incl. Tautomerase enzyme, and Toxin-antitoxin system, RelE/ParE toxin family
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6179_Mixed,_incl._Tautomerase_enzyme,_and_Toxin-antitoxin_system,_RelE/ParE_toxin_family


id: CL:6180
description: Mixed, incl. Tautomerase enzyme, and Toxin-antitoxin system, RelE/ParE toxin family
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6180_Mixed,_incl._Tautomerase_enzyme,_and_Toxin-antitoxin_system,_RelE/ParE_toxin_family


id: CL:6181
description: Mixed, incl. ParE toxin of type II toxin-antitoxin system, parDE, and Tautomerase enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6181_Mixed,_incl._ParE_toxin_of_type_II_toxin-antitoxin_system,_parDE,_and_Tautomerase_enzyme


id: CL:6193
description: Mixed, incl. Toxin YoeB, and Antitoxin Phd_YefM, type II toxin-antitoxin system
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6193_Mixed,_incl._Toxin_YoeB,_and_Antitoxin_Phd_YefM,_type_II_toxin-antitoxin_system


id: CL:6203
description: Mixed, incl. Major Facilitator Superfamily, and DNA glycosylase
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6203_Mixed,_incl._Major_Facilitator_Superfamily,_and_DNA_glycosylase


id: CL:6215
description: Antitoxin Phd_YefM, type II toxin-antitoxin system, and Toxin YoeB
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6215_Antitoxin_Phd_YefM,_type_II_toxin-antitoxin_system,_and_Toxin_YoeB


id: CL:6236
description: Mixed, incl. Helix-turn-helix XRE-family like proteins, and Plasmid maintenance
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6236_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Plasmid_maintenance


id: CL:6239
description: Mixed, incl. Conserved hypothetical protein CHP04442, and Prolipoprotein diacylglyceryl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6239_Mixed,_incl._Conserved_hypothetical_protein_CHP04442,_and_Prolipoprotein_diacylglyceryl_transferase


id: CL:6252
description: Mixed, incl. SEC-C motif, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6252_Mixed,_incl._SEC-C_motif,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:6263
description: Mixed, incl. FMN-binding split barrel, and YaeB-like
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6263_Mixed,_incl._FMN-binding_split_barrel,_and_YaeB-like


id: CL:6264
description: Mixed, incl. Cellular response to starvation, and Heparin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6264_Mixed,_incl._Cellular_response_to_starvation,_and_Heparin_binding


id: CL:6277
description: Mixed, incl. YaeB-like, and Coenzyme F420 binding
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6277_Mixed,_incl._YaeB-like,_and_Coenzyme_F420_binding


id: CL:6288
description: Mixed, incl. Biosynthesis of siderophore group nonribosomal peptides, and Sodium
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6288_Mixed,_incl._Biosynthesis_of_siderophore_group_nonribosomal_peptides,_and_Sodium


id: CL:6289
description: Mixed, incl. Sodium, and Citrate transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6289_Mixed,_incl._Sodium,_and_Citrate_transporter


id: CL:6303
description: Transposase IS200-like, and Biosynthesis of siderophore group nonribosomal peptides
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6303_Transposase_IS200-like,_and_Biosynthesis_of_siderophore_group_nonribosomal_peptides


id: CL:6321
description: Mixed, incl. Integrase/recombinase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6321_Mixed,_incl._Integrase/recombinase,_N-terminal


id: CL:6333
description: Mixed, incl. Protein refolding, and Hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6333_Mixed,_incl._Protein_refolding,_and_Hydrolase


id: CL:6343
description: Mixed, incl. NlpC/P60 family, and C5-Branched dibasic acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6343_Mixed,_incl._NlpC/P60_family,_and_C5-Branched_dibasic_acid_metabolism


id: CL:635
description: Phosphoribosylglycinamide formyltransferase activity, and One-carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:635_Phosphoribosylglycinamide_formyltransferase_activity,_and_One-carbon_metabolism


id: CL:6359
description: Mostly uncharacterized, incl. DNA helicase, DnaB-like, N-terminal, and Homologous recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6359_Mostly_uncharacterized,_incl._DNA_helicase,_DnaB-like,_N-terminal,_and_Homologous_recombination


id: CL:6360
description: Mostly uncharacterized, incl. DNA helicase, DnaB-like, N-terminal, and Homologous recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6360_Mostly_uncharacterized,_incl._DNA_helicase,_DnaB-like,_N-terminal,_and_Homologous_recombination


id: CL:6362
description: Mixed, incl. DNA helicase, DnaB-like, N-terminal, and Homologous recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6362_Mixed,_incl._DNA_helicase,_DnaB-like,_N-terminal,_and_Homologous_recombination


id: CL:6391
description: Membrane-bounded organelle, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6391_Membrane-bounded_organelle,_and_Signal


id: CL:6401
description: Mixed, incl. Integrase, DNA-binding domain, and Domain of unknown function (DUF927)
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6401_Mixed,_incl._Integrase,_DNA-binding_domain,_and_Domain_of_unknown_function_(DUF927)


id: CL:6402
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6402_Mixed,_incl._Helix-turn-helix_domain,_group_17,_and_Type_I_restriction_enzyme_R_protein_N_terminus_(HSDR_N)

description:
  Mixed, incl. Helix-turn-helix domain, group 17, and Type I restriction enzyme R protein N terminus (HSDR_N)


id: CL:6404
description: Mixed, incl. Helix-turn-helix domain, group 17, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6404_Mixed,_incl._Helix-turn-helix_domain,_group_17,_and_Coiled_coil


id: CL:6421
description: Mixed, incl. Helix-turn-helix domain, group 17, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6421_Mixed,_incl._Helix-turn-helix_domain,_group_17,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:6432
description: Integrase, DNA-binding domain, and Domain of unknown function (DUF927)
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6432_Integrase,_DNA-binding_domain,_and_Domain_of_unknown_function_(DUF927)


id: CL:6434
description: Domain of unknown function (DUF927), and Prophage CP4-57 regulatory protein (AlpA)
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6434_Domain_of_unknown_function_(DUF927),_and_Prophage_CP4-57_regulatory_protein_(AlpA)


id: CL:644
description: Mixed, incl. Purine-containing compound salvage, and GMP biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:644_Mixed,_incl._Purine-containing_compound_salvage,_and_GMP_biosynthesis


id: CL:6459
description: Transposase activity, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6459_Transposase_activity,_and_DNA_integration


id: CL:646
description: GMP biosynthesis, and Nucleotidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:646_GMP_biosynthesis,_and_Nucleotidase_activity


id: CL:6460
description: Mixed, incl. DNA integration, and Transposase
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6460_Mixed,_incl._DNA_integration,_and_Transposase


id: CL:6462
description: DNA integration, and Transposase
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6462_DNA_integration,_and_Transposase


id: CL:6491
description: Mixed, incl. HUH transposase Y1 type, and Transposase IS200-like
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6491_Mixed,_incl._HUH_transposase_Y1_type,_and_Transposase_IS200-like


id: CL:6492
description: HUH transposase Y1 type, and Transposase IS200-like
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6492_HUH_transposase_Y1_type,_and_Transposase_IS200-like


id: CL:6513
description: Mixed, incl. BRO N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:6513_Mixed,_incl._BRO_N-terminal_domain


id: CL:680
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Histidine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:680_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Histidine_biosynthesis


id: CL:681
description: Phenylalanine, tyrosine and tryptophan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:681_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis


id: CL:682
description: Chorismate metabolic process, and NeuB family
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:682_Chorismate_metabolic_process,_and_NeuB_family


id: CL:685
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:685_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway,_and_Chorismate_biosynthetic_process

description:
  Aromatic amino acid family biosynthetic process, prephenate pathway, and Chorismate biosynthetic process


id: CL:726
description: Histidine biosynthesis protein, and Imidazoleglycerol-phosphate synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:726_Histidine_biosynthesis_protein,_and_Imidazoleglycerol-phosphate_synthase_activity


id: CL:747
description: Mixed, incl. Vitamin metabolic process, and tRNA threonylcarbamoyladenosine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:747_Mixed,_incl._Vitamin_metabolic_process,_and_tRNA_threonylcarbamoyladenosine_modification


id: CL:748
description: Mixed, incl. Vitamin metabolic process, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:748_Mixed,_incl._Vitamin_metabolic_process,_and_Coenzyme_A_biosynthesis


id: CL:749
description: Mixed, incl. Riboflavin metabolic process, and Cellular modified amino acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:749_Mixed,_incl._Riboflavin_metabolic_process,_and_Cellular_modified_amino_acid_biosynthetic_process


id: CL:751
description: Riboflavin metabolic process, and Folic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:751_Riboflavin_metabolic_process,_and_Folic_acid_metabolic_process


id: CL:776
description: Deoxyribonucleotide biosynthetic process, and Flavoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:776_Deoxyribonucleotide_biosynthetic_process,_and_Flavoprotein


id: CL:793
description: Mixed, incl. Pyridoxine biosynthesis, and Diadenylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:793_Mixed,_incl._Pyridoxine_biosynthesis,_and_Diadenylate_cyclase


id: CL:810
description: tRNA threonylcarbamoyladenosine modification, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:810_tRNA_threonylcarbamoyladenosine_modification,_and_Acetyltransferase_(GNAT)_domain


id: CL:811
description: tRNA threonylcarbamoyladenosine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:811_tRNA_threonylcarbamoyladenosine_modification


id: CL:82
description: Mixed, incl. Generation of precursor metabolites and energy, and Fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:82_Mixed,_incl._Generation_of_precursor_metabolites_and_energy,_and_Fatty_acid_metabolic_process


id: CL:820
description: Acetyltransferase (GNAT) domain, and Cupin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:820_Acetyltransferase_(GNAT)_domain,_and_Cupin_domain


id: CL:83
description: Mixed, incl. Fatty acid metabolic process, and Citrate cycle (TCA cycle)
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:83_Mixed,_incl._Fatty_acid_metabolic_process,_and_Citrate_cycle_(TCA_cycle)


id: CL:834
description: Biotin metabolic process, and Polyamine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:834_Biotin_metabolic_process,_and_Polyamine_biosynthetic_process


id: CL:84
description: Mixed, incl. Citrate cycle (TCA cycle), and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:84_Mixed,_incl._Citrate_cycle_(TCA_cycle),_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:86
description: Citrate cycle (TCA cycle), and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:86_Citrate_cycle_(TCA_cycle),_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:861
description: Glycerophospholipid metabolism, and Glycerolipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:861_Glycerophospholipid_metabolism,_and_Glycerolipid_metabolism


id: CL:864
description: Cytidylyltransferase family, and Glycerophospholipid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:864_Cytidylyltransferase_family,_and_Glycerophospholipid_biosynthetic_process


id: CL:87
description: Citrate cycle (TCA cycle), and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:87_Citrate_cycle_(TCA_cycle),_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:876
description: Alditol phosphate metabolic process, and Phosphate acyltransferases
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:876_Alditol_phosphate_metabolic_process,_and_Phosphate_acyltransferases


id: CL:88
description: Citrate cycle (TCA cycle), and Taurine and hypotaurine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:88_Citrate_cycle_(TCA_cycle),_and_Taurine_and_hypotaurine_metabolism


id: CL:887
description: Phospholipase D-like domain, and Phosphatidylserine decarboxylase
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:887_Phospholipase_D-like_domain,_and_Phosphatidylserine_decarboxylase


id: CL:89
description: Citrate cycle (TCA cycle), and Taurine and hypotaurine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:89_Citrate_cycle_(TCA_cycle),_and_Taurine_and_hypotaurine_metabolism


id: CL:903
description: Mixed, incl. NmrA-like family, and Lipid glycosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:903_Mixed,_incl._NmrA-like_family,_and_Lipid_glycosylation


id: CL:914
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:914_Mixed,_incl._Sulfur_compound_metabolic_process,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors

description:
  Mixed, incl. Sulfur compound metabolic process, and Oxidoreductase activity, acting on a sulfur group of donors


id: CL:915
description: Mixed, incl. Sulfur compound metabolic process, and Cellular response to chemical stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:915_Mixed,_incl._Sulfur_compound_metabolic_process,_and_Cellular_response_to_chemical_stimulus


id: CL:916
description: Mixed, incl. Sulfur compound metabolic process, and Cellular response to chemical stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:916_Mixed,_incl._Sulfur_compound_metabolic_process,_and_Cellular_response_to_chemical_stimulus


id: CL:917
description: Sulfur compound metabolic process, and Latent infection - Other responses of Mtb to phagocytosis
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:917_Sulfur_compound_metabolic_process,_and_Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis


id: CL:918
description: Sulfur compound metabolic process, and Transcription regulator Rrf2
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:918_Sulfur_compound_metabolic_process,_and_Transcription_regulator_Rrf2


id: CL:919
description: Mixed, incl. Iron-sulfur cluster assembly, and Rhodanese-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:919_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Rhodanese-like_domain_superfamily


id: CL:92
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:92_Pyruvate_flavodoxin/ferredoxin_oxidoreductase,_thiamine_diP-bdg,_and_Thiamine_pyrophosphate_enzyme,_TPP-binding

description:
  Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg, and Thiamine pyrophosphate enzyme, TPP-binding


id: CL:920
description: Mixed, incl. Rhodanese-like domain superfamily, and Methylglyoxal catabolic process to lactate
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:920_Mixed,_incl._Rhodanese-like_domain_superfamily,_and_Methylglyoxal_catabolic_process_to_lactate


id: CL:923
description: Rhodanese-like domain, and Methylglyoxal catabolic process to lactate
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:923_Rhodanese-like_domain,_and_Methylglyoxal_catabolic_process_to_lactate


id: CL:944
description: Cysteine desulfurase, and NIF system FeS cluster assembly, NifU, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:944_Cysteine_desulfurase,_and_NIF_system_FeS_cluster_assembly,_NifU,_N-terminal


id: CL:958
description: Mixed, incl. Sulfur amino acid metabolic process, and Sulfate assimilation
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:958_Mixed,_incl._Sulfur_amino_acid_metabolic_process,_and_Sulfate_assimilation


id: CL:960
description: Sulfur amino acid biosynthetic process, and S-adenosylmethionine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:960_Sulfur_amino_acid_biosynthetic_process,_and_S-adenosylmethionine_metabolic_process


id: CL:962
description: One-carbon metabolic process, and S-methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:962_One-carbon_metabolic_process,_and_S-methyltransferase_activity


id: CL:997
description: Oxidoreductase activity, acting on a sulfur group of donors, and AhpC/TSA family
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:997_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_and_AhpC/TSA_family


id: CL:999
description: AhpC/TSA family, and Protein-disulfide reductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_115783_STRINGid_CL:999_AhpC/TSA_family,_and_Protein-disulfide_reductase_activity


id: GO:0000462
description: Maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
memo: https://amigo.geneontology.org/amigo/term/GO:0000462
golevel: 11
name:
  GOBP.STRING_v12.0_115783_STRINGid_GO:0000462_Maturation_of_SSU-rRNA_from_tricistronic_rRNA_transcript_(SSU-rRNA,_5.8S_rRNA,_LSU-rRNA)


id: GO:0000701
description: Purine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0000701
golevel: 7
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0000701_Purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 10
name:
  GOBP.STRING_v12.0_115783_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000724
description: Double-strand break repair via homologous recombination
memo: https://amigo.geneontology.org/amigo/term/GO:0000724
golevel: 9
name:
  GOBP.STRING_v12.0_115783_STRINGid_GO:0000724_Double-strand_break_repair_via_homologous_recombination


id: GO:0000820
description: Regulation of glutamine family amino acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0000820
golevel: 9
name:
  GOBP.STRING_v12.0_115783_STRINGid_GO:0000820_Regulation_of_glutamine_family_amino_acid_metabolic_process


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0002926
description: tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation
memo: https://amigo.geneontology.org/amigo/term/GO:0002926
golevel: 13
name:
  GOBP.STRING_v12.0_115783_STRINGid_GO:0002926_tRNA_wobble_base_5-methoxycarbonylmethyl-2-thiouridinylation


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003864
description: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003864
golevel: 5
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0003864_3-methyl-2-oxobutanoate_hydroxymethyltransferase_activity


id: GO:0003871
description: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003871
golevel: 6
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0003871_5-methyltetrahydropteroyltriglutamate-homocysteine_S-methyltransferase_activity


id: GO:0003882
description: CDP-diacylglycerol-serine O-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003882
golevel: 6
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0003882_CDP-diacylglycerol-serine_O-phosphatidyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 6
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 5
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0004015
description: adenosylmethionine-8-amino-7-oxononanoate transaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004015
golevel: 5
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0004015_adenosylmethionine-8-amino-7-oxononanoate_transaminase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004316
description: 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004316
golevel: 6
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0004316_3-oxoacyl-[acyl-carrier-protein]_reductase_(NADPH)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
golevel: 6
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004473
description: Malate dehydrogenase (decarboxylating) (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004473
golevel: 6
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0004473_Malate_dehydrogenase_(decarboxylating)_(NADP+)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
golevel: 5
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 6
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004719
description: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004719
golevel: 8
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0004719_protein-L-isoaspartate_(D-aspartate)_O-methyltransferase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_115783_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 11
name:
  GOBP.STRING_v12.0_115783_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0007157
description: Heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
memo: https://amigo.geneontology.org/amigo/term/GO:0007157
golevel: 5
name:
  GOBP.STRING_v12.0_115783_STRINGid_GO:0007157_Heterophilic_cell-cell_adhesion_via_plasma_membrane_cell_adhesion_molecules


id: GO:0008108
description: UDP-glucose:hexose-1-phosphate uridylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008108
golevel: 6
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0008108_UDP-glucose:hexose-1-phosphate_uridylyltransferase_activity


id: GO:0008271
description: Secondary active sulfate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008271
golevel: 6
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0008271_Secondary_active_sulfate_transmembrane_transporter_activity


id: GO:0008425
description: 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008425
golevel: 7
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0008425_2-polyprenyl-6-methoxy-1,4-benzoquinone_methyltransferase_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 7
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008657
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) inhibitor activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008657
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0008657_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_inhibitor_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
golevel: 5
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008690
description: 3-deoxy-manno-octulosonate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008690
golevel: 6
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0008690_3-deoxy-manno-octulosonate_cytidylyltransferase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
golevel: 6
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008759
description: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008759
golevel: 5
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0008759_UDP-3-O-[3-hydroxymyristoyl]_N-acetylglucosamine_deacetylase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008780
description: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008780
golevel: 6
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0008780_acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine_O-acyltransferase_activity


id: GO:0008817
description: cob(I)yrinic acid a,c-diamide adenosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008817
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0008817_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008882
description: [Glutamate-ammonia-ligase] adenylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008882
golevel: 6
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0008882_[Glutamate-ammonia-ligase]_adenylyltransferase_activity


id: GO:0008939
description: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008939
golevel: 5
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0008939_Nicotinate-nucleotide-dimethylbenzimidazole_phosphoribosyltransferase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0008965
description: Phosphoenolpyruvate-protein phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008965
golevel: 5
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0008965_Phosphoenolpyruvate-protein_phosphotransferase_activity


id: GO:0008982
description: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008982
golevel: 5
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0008982_protein-N(PI)-phosphohistidine-sugar_phosphotransferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 6
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 9
name:
  GOBP.STRING_v12.0_115783_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 9
name:
  GOBP.STRING_v12.0_115783_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 9
name:
  GOBP.STRING_v12.0_115783_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 10
name:
  GOBP.STRING_v12.0_115783_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 9
name:
  GOBP.STRING_v12.0_115783_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 10
name:
  GOBP.STRING_v12.0_115783_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009175
description: Pyrimidine ribonucleoside monophosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009175
golevel: 10
name:
  GOBP.STRING_v12.0_115783_STRINGid_GO:0009175_Pyrimidine_ribonucleoside_monophosphate_catabolic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 9
name:
  GOBP.STRING_v12.0_115783_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 10
name:
  GOBP.STRING_v12.0_115783_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 9
name:
  GOBP.STRING_v12.0_115783_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 10
name:
  GOBP.STRING_v12.0_115783_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 10
name:
  GOBP.STRING_v12.0_115783_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 9
name:
  GOBP.STRING_v12.0_115783_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 10
name:
  GOBP.STRING_v12.0_115783_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009210
description: Pyrimidine ribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009210
golevel: 10
name:
  GOBP.STRING_v12.0_115783_STRINGid_GO:0009210_Pyrimidine_ribonucleoside_triphosphate_catabolic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 9
name:
  GOBP.STRING_v12.0_115783_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 10
name:
  GOBP.STRING_v12.0_115783_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 10
name:
  GOBP.STRING_v12.0_115783_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 9
name:
  GOBP.STRING_v12.0_115783_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 10
name:
  GOBP.STRING_v12.0_115783_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009401
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system
memo: https://amigo.geneontology.org/amigo/term/GO:0009401
golevel: 8
name:
  GOBP.STRING_v12.0_115783_STRINGid_GO:0009401_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system


id: GO:0009427
description: Bacterial-type flagellum basal body, distal rod, L ring
memo: https://amigo.geneontology.org/amigo/term/GO:0009427
golevel: 8
name:
  GOCC.STRING_v12.0_115783_STRINGid_GO:0009427_Bacterial-type_flagellum_basal_body,_distal_rod,_L_ring


id: GO:0009428
description: Bacterial-type flagellum basal body, distal rod, P ring
memo: https://amigo.geneontology.org/amigo/term/GO:0009428
golevel: 8
name:
  GOCC.STRING_v12.0_115783_STRINGid_GO:0009428_Bacterial-type_flagellum_basal_body,_distal_rod,_P_ring


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 6
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 6
name:
  GOBP.STRING_v12.0_115783_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 6
name:
  GOBP.STRING_v12.0_115783_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
golevel: 3
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015415
description: ATPase-coupled phosphate ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015415
golevel: 7
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0015415_ATPase-coupled_phosphate_ion_transmembrane_transporter_activity


id: GO:0015451
description: Decarboxylation-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015451
golevel: 5
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0015451_Decarboxylation-driven_active_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015651
description: Quaternary ammonium group transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015651
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0015651_Quaternary_ammonium_group_transmembrane_transporter_activity


id: GO:0015658
description: Branched-chain amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015658
golevel: 6
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0015658_Branched-chain_amino_acid_transmembrane_transporter_activity


id: GO:0015932
description: Nucleobase-containing compound transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015932
golevel: 3
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0015932_Nucleobase-containing_compound_transmembrane_transporter_activity


id: GO:0015975
description: Energy derivation by oxidation of reduced inorganic compounds
memo: https://amigo.geneontology.org/amigo/term/GO:0015975
golevel: 4
name:
  GOBP.STRING_v12.0_115783_STRINGid_GO:0015975_Energy_derivation_by_oxidation_of_reduced_inorganic_compounds


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016625
memo: https://amigo.geneontology.org/amigo/term/GO:0016625
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016625_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_iron-sulfur_protein_as_acceptor

description:
  Oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016641
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016641
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016641_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_oxygen_as_acceptor


id: GO:0016642
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016642
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016642_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_disulfide_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016652
description: Oxidoreductase activity, acting on NAD(P)H, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016652
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016652_Oxidoreductase_activity,_acting_on_NAD(P)H,_NAD(P)_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016657
description: Oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016657
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016657_Oxidoreductase_activity,_acting_on_NAD(P)H,_nitrogenous_group_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016662
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016662
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016662_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors,_cytochrome_as_acceptor


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016675
description: Oxidoreductase activity, acting on a heme group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016675
golevel: 3
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016675_Oxidoreductase_activity,_acting_on_a_heme_group_of_donors


id: GO:0016677
description: Oxidoreductase activity, acting on a heme group of donors, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016677
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016677_Oxidoreductase_activity,_acting_on_a_heme_group_of_donors,_nitrogenous_group_as_acceptor


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016699
description: Oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016699
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016699_Oxidoreductase_activity,_acting_on_hydrogen_as_donor,_iron-sulfur_protein_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016702
memo: https://amigo.geneontology.org/amigo/term/GO:0016702
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016702_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen


id: GO:0016703
memo: https://amigo.geneontology.org/amigo/term/GO:0016703
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016703_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_one_atom_of_oxygen_(internal_monooxygenases_or_internal_mixed_function_oxidases)

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)


id: GO:0016705
memo: https://amigo.geneontology.org/amigo/term/GO:0016705
golevel: 3
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016705_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: GO:0016721
description: Oxidoreductase activity, acting on superoxide radicals as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016721
golevel: 3
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016721_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016730
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016730
golevel: 3
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016730_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: GO:0016731
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016731
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016731_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_NAD_or_NADP_as_acceptor


id: GO:0016732
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors, dinitrogen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016732
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016732_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_dinitrogen_as_acceptor


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
golevel: 6
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016823
description: Hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances
memo: https://amigo.geneontology.org/amigo/term/GO:0016823
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016823_Hydrolase_activity,_acting_on_acid_carbon-carbon_bonds,_in_ketonic_substances


id: GO:0016825
description: Hydrolase activity, acting on acid phosphorus-nitrogen bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016825
golevel: 3
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016825_Hydrolase_activity,_acting_on_acid_phosphorus-nitrogen_bonds


id: GO:0016837
description: Carbon-oxygen lyase activity, acting on polysaccharides
memo: https://amigo.geneontology.org/amigo/term/GO:0016837
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016837_Carbon-oxygen_lyase_activity,_acting_on_polysaccharides


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_115783_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


