# geneInfo

ensembl_gene_id: RBI_I00001
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: RBI_I00002
symbol: dnaN
gene_biotype: protein_coding
description:
  DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of  [...]


ensembl_gene_id: RBI_I00004
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.


ensembl_gene_id: RBI_I00006
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: RBI_I00008
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: RBI_I00010
symbol: secD
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: RBI_I00011
symbol: secF
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: RBI_I00014
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: RBI_I00018
symbol: CCO03758.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Lactate dehydrogenase and related dehydrogenases; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: RBI_I00019
symbol: proB
gene_biotype: protein_coding
description:
  Gamma-glutamyl kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: RBI_I00020
symbol: proA
gene_biotype: protein_coding
description:
  Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: RBI_I00024
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: RBI_I00025
symbol: cobD
gene_biotype: protein_coding
description:
  Adenosylcobinamide-phosphate synthase CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: RBI_I00046
symbol: punA
gene_biotype: protein_coding
description:
  Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: RBI_I00051
symbol: alr
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: RBI_I00055
symbol: rimP
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: RBI_I00056
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription termination factor NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: RBI_I00059
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: RBI_I00060
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: RBI_I00062
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: RBI_I00065
symbol: gltX
gene_biotype: protein_coding
description:
  Glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: RBI_I00086
symbol: groES
gene_biotype: protein_coding
description:
  Co-chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: RBI_I00087
symbol: groEL
gene_biotype: protein_coding
description:
  Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: RBI_I00102
symbol: cheB
gene_biotype: protein_coding
description:
  Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: RBI_I00107
symbol: dut
gene_biotype: protein_coding
description:
  dUTP pyrophosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.


ensembl_gene_id: RBI_I00109
symbol: CCO03849.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: RBI_I00118
symbol: metF
gene_biotype: protein_coding
description:
  5,10-methylenetetrahydrofolate reductase; Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: RBI_I00120
symbol: spo0A
gene_biotype: protein_coding
description:
  Stage 0 sporulation protein A homolog; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.


ensembl_gene_id: RBI_I00131
symbol: glmU
gene_biotype: protein_coding
description:
  Bifunctional protein GlmU; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: RBI_I00135
symbol: pth
gene_biotype: protein_coding
description:
  Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: RBI_I00136
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor (superfamily II helicase); Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: RBI_I00143
symbol: CCO03877.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1.


ensembl_gene_id: RBI_I00171
symbol: feoB1
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: RBI_I00183
symbol: hypF
gene_biotype: protein_coding
description:
  Carbamoyltransferase/(NiFe) hydrogenase maturation protein HypF; Belongs to the carbamoyltransferase HypF family.


ensembl_gene_id: RBI_I00190
symbol: hemC
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: RBI_I00192
symbol: hemA
gene_biotype: protein_coding
description:
  Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: RBI_I00282
symbol: pstC
gene_biotype: protein_coding
description:
  Phosphate ABC transporter permease component PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: RBI_I00284
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter, ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: RBI_I00285
symbol: phoU
gene_biotype: protein_coding
description:
  Phosphate transport system regulator protein PhoU; Plays a role in the regulation of phosphate uptake.


ensembl_gene_id: RBI_I00300
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: RBI_I00303
symbol: rsmH
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: RBI_I00306
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramyl-tripeptide synthetase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: RBI_I00307
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: RBI_I00310
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: RBI_I00312
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: RBI_I00314
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: RBI_I00325
symbol: cls1
gene_biotype: protein_coding
description:
  Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.


ensembl_gene_id: RBI_I00372
symbol: ppk1
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: RBI_I00375
symbol: proS
gene_biotype: protein_coding
description:
  Prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).


ensembl_gene_id: RBI_I00381
symbol: ptsI1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: RBI_I00384
symbol: CCO04112.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.


ensembl_gene_id: RBI_I00388
symbol: CCO04116.1
gene_biotype: protein_coding
description:
  ABC transporter membrane component; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: RBI_I00392
symbol: CCO04120.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; Belongs to the TtcA family.


ensembl_gene_id: RBI_I00412
symbol: spoIIAB
gene_biotype: protein_coding
description:
  Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.


ensembl_gene_id: RBI_I00417
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: RBI_I00423
symbol: pfkA3
gene_biotype: protein_coding
description:
  Putative 6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.


ensembl_gene_id: RBI_I00424
symbol: valS
gene_biotype: protein_coding
description:
  Valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: RBI_I00425
symbol: ileS
gene_biotype: protein_coding
description:
  Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.


ensembl_gene_id: RBI_I00435
symbol: CCO04163.1
gene_biotype: protein_coding
description:
  Xylan 1,4-beta-xylosidase (Glycoside Hydrolase Family 43 protein); Belongs to the glycosyl hydrolase 43 family.


ensembl_gene_id: RBI_I00436
symbol: putP
gene_biotype: protein_coding
description:
  Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: RBI_I00450
symbol: CCO04178.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Inactive homolog of metal-dependent proteases,putative molecular chaperone.


ensembl_gene_id: RBI_I00464
symbol: coaD
gene_biotype: protein_coding
description:
  Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: RBI_I00494
symbol: CCO04218.1
gene_biotype: protein_coding
description:
  Carbohydrate-Binding Module Family 35 protein / Glycoside Hydrolase Family 26 protein; Belongs to the glycosyl hydrolase 26 family.


ensembl_gene_id: RBI_I00496
symbol: CCO04220.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain.


ensembl_gene_id: RBI_I00518
symbol: CCO04242.1
gene_biotype: protein_coding
description:
  apbE family protein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: RBI_I00519
symbol: rnfC
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.


ensembl_gene_id: RBI_I00520
symbol: rnfD
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: RBI_I00522
symbol: rnfE
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfE; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: RBI_I00523
symbol: rnfA
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: RBI_I00525
symbol: rnfB
gene_biotype: protein_coding
description:
  Electron transport complex protein RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.


ensembl_gene_id: RBI_I00540
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: RBI_I00542
symbol: spoIVA
gene_biotype: protein_coding
description:
  Stage IV sporulation protein A; ATPase. Has a role at an early stage in the morphogenesis of the spore coat.


ensembl_gene_id: RBI_I00551
symbol: CCO04275.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: RBI_I00558
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: RBI_I00560
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.


ensembl_gene_id: RBI_I00562
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: RBI_I00570
symbol: birA
gene_biotype: protein_coding
description:
  Bifunctional protein birA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: RBI_I00572
symbol: mprF
gene_biotype: protein_coding
description:
  Conserved hypothetical membrane protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.


ensembl_gene_id: RBI_I00575
symbol: pulA
gene_biotype: protein_coding
description:
  Pullulanase, type I (Carbohydrate-Binding Module Family 48 protein / Glycoside Hydrolase Family 13 protein); Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: RBI_I00613
symbol: RBI_I00613
gene_biotype: protein_coding
description:
  Putative (Di)nucleoside polyphosphate hydrolase; Transposase and inactivated derivatives; Belongs to the Nudix hydrolase family.


ensembl_gene_id: RBI_I00614
symbol: glmS
gene_biotype: protein_coding
description:
  L-glutamine:D-fructose-6-phosphate isomerase (deaminating); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: RBI_I00637
symbol: manA
gene_biotype: protein_coding
description:
  Mannan endo-1,4-beta-mannosidase (Glycoside Hydrolase Family 5 protein / Carbohydrate-Binding Module Family 13 protein); Belongs to the glycosyl hydrolase 5 (cellulase A) family.


ensembl_gene_id: RBI_I00653
symbol: RBI_I00653
gene_biotype: protein_coding
description:
  Putative alcohol dehydrogenase; Branched-chain amino acid ABC-type transport system, permease components.


ensembl_gene_id: RBI_I00665
symbol: scrB
gene_biotype: protein_coding
description:
  Sucrose-6-phosphate hydrolase (Glycoside Hydrolase Family 32 protein); Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.


ensembl_gene_id: RBI_I00676
symbol: CCO04399.1
gene_biotype: protein_coding
description:
  Uncharacterized protein involved in cytokinesis,contains TGc (transglutaminase/protease-like) domain.


ensembl_gene_id: RBI_I00679
symbol: pyrK
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).


ensembl_gene_id: RBI_I00682
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: RBI_I00691
symbol: CCO04414.1
gene_biotype: protein_coding
description:
  Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: RBI_I00694
symbol: CCO04417.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted RNA-binding protein (contains KH domain); Belongs to the UPF0109 family.


ensembl_gene_id: RBI_I00696
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: RBI_I00697
symbol: CCO04420.1
gene_biotype: protein_coding
description:
  Putative helix-turn-helix protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.


ensembl_gene_id: RBI_I00706
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: RBI_I00707
symbol: tmcAL
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.


ensembl_gene_id: RBI_I00712
symbol: pfkA2
gene_biotype: protein_coding
description:
  6-phosphofructokinase (pyrophosphate); Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.


ensembl_gene_id: RBI_I00713
symbol: metE
gene_biotype: protein_coding
description:
  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.


ensembl_gene_id: RBI_I00714
symbol: glgA1
gene_biotype: protein_coding
description:
  Glycosyltransferase Family 5 protein possible glycogen/starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.


ensembl_gene_id: RBI_I00727
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: RBI_I00728
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: RBI_I00731
symbol: rpsL
gene_biotype: protein_coding
description:
  Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: RBI_I00732
symbol: rpsG
gene_biotype: protein_coding
description:
  Ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: RBI_I00733
symbol: fusA2
gene_biotype: protein_coding
description:
  Translation elongation factor EF-G2; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF [...]


ensembl_gene_id: RBI_I00734
symbol: tuf
gene_biotype: protein_coding
description:
  Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: RBI_I00736
symbol: tadA
gene_biotype: protein_coding
description:
  Putative deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: RBI_I00737
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: RBI_I00738
symbol: CCO04461.1
gene_biotype: protein_coding
description:
  UPF0133 protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: RBI_I00739
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: RBI_I00756
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: RBI_I00760
symbol: ftsX
gene_biotype: protein_coding
description:
  Putative protein insertion permease FtsX; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: RBI_I00761
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: RBI_I00763
symbol: rimM
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: RBI_I00765
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: RBI_I00767
symbol: CCO04489.1
gene_biotype: protein_coding
description:
  RNA methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: RBI_I00772
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein lepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: RBI_I00774
symbol: hemN
gene_biotype: protein_coding
description:
  Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: RBI_I00780
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase, F0 subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: RBI_I00781
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: RBI_I00782
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase F0, B subunit; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: RBI_I00783
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase F1, delta subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: RBI_I00784
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: RBI_I00785
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase F1, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: RBI_I00786
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase F1, beta subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: RBI_I00787
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase F1, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: RBI_I00789
symbol: pncB
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: RBI_I00810
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: RBI_I00811
symbol: CCO04533.1
gene_biotype: protein_coding
description:
  Glycoside Hydrolase Family 130 protein; Converts 4-O-beta-D-mannopyranosyl-D-glucopyranose (Man-Glc) to mannose 1-phosphate (Man1P) and glucose; Belongs to the glycosyl hydrolase 130 family.


ensembl_gene_id: RBI_I00814
symbol: CCO04536.1
gene_biotype: protein_coding
description:
  Propanediol utilization protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.


ensembl_gene_id: RBI_I00837
symbol: hflX
gene_biotype: protein_coding
description:
  GTPase; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: RBI_I00840
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: RBI_I00841
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: RBI_I00842
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: RBI_I00876
symbol: nadE
gene_biotype: protein_coding
description:
  Glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: RBI_I00885
symbol: sig11
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor; Replicative DNA helicase; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: RBI_I00956
symbol: gatB
gene_biotype: protein_coding
description:
  glutamyl-tRNA (Gln) amidotransferase, subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: RBI_I00957
symbol: gatA
gene_biotype: protein_coding
description:
  glutamyl-tRNA (Gln) amidotransferase, subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: RBI_I00958
symbol: gatC
gene_biotype: protein_coding
description:
  glutamyl-tRNA (Gln) amidotransferase, subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: RBI_I00959
symbol: ligA
gene_biotype: protein_coding
description:
  NAD-dependent DNA ligase LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: RBI_I00962
symbol: mutS2
gene_biotype: protein_coding
description:
  MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: RBI_I00964
symbol: era
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: RBI_I00966
symbol: ybeY
gene_biotype: protein_coding
description:
  Translation metalloprotein YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: RBI_I00974
symbol: rnj
gene_biotype: protein_coding
description:
  Ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: RBI_I00975
symbol: CCO04690.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.


ensembl_gene_id: RBI_I00977
symbol: dnaB
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: RBI_I00978
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: RBI_I00979
symbol: hpt
gene_biotype: protein_coding
description:
  Hypoxanthine-guanine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: RBI_I00980
symbol: ftsH
gene_biotype: protein_coding
description:
  Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: RBI_I00995
symbol: bglB
gene_biotype: protein_coding
description:
  beta-D-glucoside glucohydrolase (Glycoside Hydrolase Family 3 protein); Belongs to the glycosyl hydrolase 3 family.


ensembl_gene_id: RBI_I00999
symbol: glmS-2
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: RBI_I01004
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: RBI_I01005
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: RBI_I01006
symbol: def
gene_biotype: protein_coding
description:
  Polypeptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: RBI_I01007
symbol: fmt
gene_biotype: protein_coding
description:
  Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: RBI_I01008
symbol: rsmB
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: RBI_I01009
symbol: rlmN
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: RBI_I01012
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: RBI_I01018
symbol: CCO04732.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Response regulator containing a CheY-like receiver domain and an HD-GYP domain.


ensembl_gene_id: RBI_I01020
symbol: CCO04734.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold.


ensembl_gene_id: RBI_I01031
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: RBI_I01035
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: RBI_I01043
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: RBI_I01044
symbol: pbp1A
gene_biotype: protein_coding
description:
  Penicillin-binding protein 1A; Putative bifunctional transglycosylase/transpeptidase penicillin-binding protein (Glycosyltransferase Family 51 protein).


ensembl_gene_id: RBI_I01049
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: RBI_I01053
symbol: sigG
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor, sigma-G factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: RBI_I01058
symbol: sigE
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor, sigma-E factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: RBI_I01062
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: RBI_I01063
symbol: CCO04777.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: RBI_I01064
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: RBI_I01070
symbol: gatC-2
gene_biotype: protein_coding
description:
  Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase,C subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: RBI_I01071
symbol: gatA-2
gene_biotype: protein_coding
description:
  Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase,A subunit; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: RBI_I01072
symbol: gatB-2
gene_biotype: protein_coding
description:
  Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase,B subunit; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: RBI_I01074
symbol: CCO04788.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.


ensembl_gene_id: RBI_I01097
symbol: rluC
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase C; Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: RBI_I01099
symbol: uvrB
gene_biotype: protein_coding
description:
  UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...]


ensembl_gene_id: RBI_I01100
symbol: uvrA
gene_biotype: protein_coding
description:
  UvrABC system protein A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: RBI_I01104
symbol: rplS
gene_biotype: protein_coding
description:
  Ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: RBI_I01109
symbol: CCO04823.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: RBI_I01115
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: RBI_I01116
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp endopeptidase, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: RBI_I01117
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit clpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: RBI_I01119
symbol: CCO04833.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; ATPase related to the helicase subunit of the Holliday junction resolvase.


ensembl_gene_id: RBI_I01120
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: RBI_I01121
symbol: metA
gene_biotype: protein_coding
description:
  Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.


ensembl_gene_id: RBI_I01135
symbol: eno
gene_biotype: protein_coding
description:
  Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: RBI_I01136
symbol: ispD1
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.


ensembl_gene_id: RBI_I01138
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: RBI_I01143
symbol: hprK
gene_biotype: protein_coding
description:
  HPr kinase/phosphorylase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon [...]


ensembl_gene_id: RBI_I01152
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: RBI_I01153
symbol: folD
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: RBI_I01154
symbol: rpsO
gene_biotype: protein_coding
description:
  Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: RBI_I01155
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: RBI_I01159
symbol: recD2
gene_biotype: protein_coding
description:
  Helicase, RecD/TraA family protein; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.


ensembl_gene_id: RBI_I01165
symbol: gcdB
gene_biotype: protein_coding
description:
  Sodium ion-translocating decarboxylase, beta subunit; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).


ensembl_gene_id: RBI_I01170
symbol: speD
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 2 subfamily.


ensembl_gene_id: RBI_I01172
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family.


ensembl_gene_id: RBI_I01185
symbol: scpA
gene_biotype: protein_coding
description:
  Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: RBI_I01186
symbol: scpB
gene_biotype: protein_coding
description:
  Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: RBI_I01190
symbol: rluB
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: RBI_I01199
symbol: trmU
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: RBI_I01201
symbol: iscS
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.


ensembl_gene_id: RBI_I01204
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: RBI_I01205
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: RBI_I01208
symbol: trpGD
gene_biotype: protein_coding
description:
  Anthranilate synthase component II; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: RBI_I01210
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]


ensembl_gene_id: RBI_I01217
symbol: udp
gene_biotype: protein_coding
description:
  Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the PNP/UDP phosphorylase family.


ensembl_gene_id: RBI_I01221
symbol: adhE
gene_biotype: protein_coding
description:
  Acetaldehyde dehydrogenase / alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.


ensembl_gene_id: RBI_I01224
symbol: rex
gene_biotype: protein_coding
description:
  Putative redox-sensing transcriptional regulator; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: RBI_I01237
symbol: CCO04950.1
gene_biotype: protein_coding
description:
  ABC transporter ATPase component; Belongs to the ABC transporter superfamily. Sulfate/tungstate importer (TC 3.A.1.6) family.


ensembl_gene_id: RBI_I01271
symbol: CCO04983.1
gene_biotype: protein_coding
description:
  RelA/SpoT family protein; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: RBI_I01274
symbol: rumA1
gene_biotype: protein_coding
description:
  23S rRNA (uracil-5-)-methyltransferase RumA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: RBI_I01321
symbol: galT
gene_biotype: protein_coding
description:
  Multidrug resistance protein, MATE family,drug/sodium antiporter; Galactose-1-phosphate uridyltransferase.


ensembl_gene_id: RBI_I01322
symbol: CCO05034.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; NTP pyrophosphohydrolases including oxidative damage repair enzymes.


ensembl_gene_id: RBI_I01326
symbol: gltS
gene_biotype: protein_coding
description:
  Sodium/glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family.


ensembl_gene_id: RBI_I01340
symbol: nusB
gene_biotype: protein_coding
description:
  Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: RBI_I01342
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: RBI_I01343
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: RBI_I01345
symbol: dxs1
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: RBI_I01347
symbol: nadF
gene_biotype: protein_coding
description:
  NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: RBI_I01355
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: RBI_I01357
symbol: rplT
gene_biotype: protein_coding
description:
  Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: RBI_I01360
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: RBI_I01361
symbol: trmFO
gene_biotype: protein_coding
description:
  Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: RBI_I01362
symbol: plsX
gene_biotype: protein_coding
description:
  Putative glycerol-3-phosphate acyltransferase PlsY (together with PlsY); Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: RBI_I01363
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: RBI_I01365
symbol: smc
gene_biotype: protein_coding
description:
  SMC protein (Structural Maintenance of Chromosomes); Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: RBI_I01366
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: RBI_I01368
symbol: rdgB
gene_biotype: protein_coding
description:
  Non-canonical purine NTP pyrophosphatase,RdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: RBI_I01370
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: RBI_I01372
symbol: rsfS
gene_biotype: protein_coding
description:
  Hypothetical protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: RBI_I01377
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: RBI_I01379
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: RBI_I01381
symbol: ribU
gene_biotype: protein_coding
description:
  Putative substrat specific component RibU of riboflavin ECF transporter; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family.


ensembl_gene_id: RBI_I01382
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: RBI_I01385
symbol: icd
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.


ensembl_gene_id: RBI_I01389
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase; Belongs to the HisA/HisF family.


ensembl_gene_id: RBI_I01397
symbol: trmH2
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: RBI_I01399
symbol: ung
gene_biotype: protein_coding
description:
  uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: RBI_I01402
symbol: mltG
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: RBI_I01403
symbol: CCO05115.1
gene_biotype: protein_coding
description:
  5-formyltetrahydrofolate cyclo-ligase; AltName: Full=5,10-methenyl-tetrahydrofolate synthetase; Short=Methenyl-THF synthetase; Short=MTHFS.


ensembl_gene_id: RBI_I01407
symbol: thyX
gene_biotype: protein_coding
description:
  FAD-dependent thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: RBI_I01419
symbol: nrdG
gene_biotype: protein_coding
description:
  Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.


ensembl_gene_id: RBI_I01454
symbol: ppiD
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: RBI_I01458
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.


ensembl_gene_id: RBI_I01459
symbol: folC
gene_biotype: protein_coding
description:
  FolC probable bifunctional protein (folylpolyglutamate synthetase/dihydrofolate synthetase); Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: RBI_I01460
symbol: uvrC
gene_biotype: protein_coding
description:
  UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: RBI_I01463
symbol: cobB
gene_biotype: protein_coding
description:
  NAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.


ensembl_gene_id: RBI_I01468
symbol: metG
gene_biotype: protein_coding
description:
  Methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: RBI_I01479
symbol: CCO05181.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain.


ensembl_gene_id: RBI_I01486
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA/Sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: RBI_I01490
symbol: coaX
gene_biotype: protein_coding
description:
  Pantothenate kinase, type III; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: RBI_I01494
symbol: CCO05196.1
gene_biotype: protein_coding
description:
  Glycoside Hydrolase Family 43 protein / Carbohydrate-Binding Module Family 6 protein; Belongs to the glycosyl hydrolase 43 family.


ensembl_gene_id: RBI_I01495
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: RBI_I01505
symbol: vsr
gene_biotype: protein_coding
description:
  DNA mismatch endonuclease, patch repair protein; May nick specific sequences that contain T:G mispairs resulting from m5C-deamination.


ensembl_gene_id: RBI_I01528
symbol: hsdS
gene_biotype: protein_coding
description:
  Phage_integrase domain-containing protein; Restriction endonuclease S subunits; Belongs to the 'phage' integrase family.


ensembl_gene_id: RBI_I01548
symbol: CCO05250.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases.


ensembl_gene_id: RBI_I01562
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: RBI_I01623
symbol: rplU
gene_biotype: protein_coding
description:
  Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: RBI_I01626
symbol: cgtA
gene_biotype: protein_coding
description:
  Obg family GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: RBI_I01627
symbol: mrnC
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.


ensembl_gene_id: RBI_I01637
symbol: malP
gene_biotype: protein_coding
description:
  Maltodextrin phosphorylase (Glycosyltransferase Family 35 protein); Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: RBI_I01649
symbol: ppiD-2
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: RBI_I01651
symbol: B-mannanase
gene_biotype: protein_coding
description:
  B-mannanase; b-1,3-xylanase (Carbohydrate-Binding Module Family 35 protein / Glycoside Hydrolase Family 26 protein); Belongs to the glycosyl hydrolase 26 family.


ensembl_gene_id: RBI_I01654
symbol: gpr
gene_biotype: protein_coding
description:
  GPR endopeptidase; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.


ensembl_gene_id: RBI_I01661
symbol: ilvA
gene_biotype: protein_coding
description:
  K01754 threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: RBI_I01666
symbol: maf
gene_biotype: protein_coding
description:
  Septum formation protein Maf; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: RBI_I01671
symbol: CCO05373.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Uncharacterized protein (competence- and mitomycin-induced); Belongs to the CinA family.


ensembl_gene_id: RBI_I01672
symbol: thiI
gene_biotype: protein_coding
description:
  Probable thiamine biosynthesis protein thiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.


ensembl_gene_id: RBI_I01673
symbol: CCO05375.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.


ensembl_gene_id: RBI_I01730
symbol: serA
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: RBI_I01731
symbol: serC
gene_biotype: protein_coding
description:
  Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.


ensembl_gene_id: RBI_I01741
symbol: CCO05440.1
gene_biotype: protein_coding
description:
  Transporter, solute:sodium symporter (SSS) family; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: RBI_I01744
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, carboxyl transferase,alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: RBI_I01745
symbol: accD-2
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: RBI_I01746
symbol: accC
gene_biotype: protein_coding
description:
  Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: RBI_I01748
symbol: fabE
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: RBI_I01749
symbol: fabF
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: RBI_I01750
symbol: fabG
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: RBI_I01752
symbol: fabH
gene_biotype: protein_coding
description:
  Beta-ketoacyl-acyl-carrier-protein synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: RBI_I01757
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: RBI_I01761
symbol: xpt
gene_biotype: protein_coding
description:
  Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.


ensembl_gene_id: RBI_I01773
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: RBI_I01774
symbol: argJ
gene_biotype: protein_coding
description:
  Glutamate N-acetyltransferase / amino-acid N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: RBI_I01775
symbol: argB
gene_biotype: protein_coding
description:
  Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: RBI_I01776
symbol: argD
gene_biotype: protein_coding
description:
  Acetylornithine/N-succinyldiaminopimelate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: RBI_I01777
symbol: argF
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: RBI_I01793
symbol: CCO05492.1
gene_biotype: protein_coding
description:
  Uncharacterized conserved protein (some members contain a von Willebrand factor type A (vWA) domain).


ensembl_gene_id: RBI_I01802
symbol: CCO05501.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Predicted Co/Zn/Cd cation transporters; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: RBI_I01808
symbol: CCO05507.1
gene_biotype: protein_coding
description:
  Predicted redox protein, regulator of disulfide bond formation; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: RBI_I01809
symbol: CCO05508.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: RBI_I01814
symbol: atpB-2
gene_biotype: protein_coding
description:
  ATP synthase F0, subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: RBI_I01815
symbol: atpE-2
gene_biotype: protein_coding
description:
  ATP synthase FO, subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: RBI_I01817
symbol: atpF-2
gene_biotype: protein_coding
description:
  ATP synthase FO, subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: RBI_I01818
symbol: atpH-2
gene_biotype: protein_coding
description:
  ATP synthase F1, subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: RBI_I01823
symbol: rplJ
gene_biotype: protein_coding
description:
  Ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: RBI_I01824
symbol: rpsD
gene_biotype: protein_coding
description:
  Ribosomal protein S4; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: RBI_I01900
symbol: ureE
gene_biotype: protein_coding
description:
  Urease accessory protein UreE; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.


ensembl_gene_id: RBI_I01901
symbol: ureF
gene_biotype: protein_coding
description:
  Urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: RBI_I01902
symbol: ureG
gene_biotype: protein_coding
description:
  Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.


ensembl_gene_id: RBI_I01903
symbol: ureD
gene_biotype: protein_coding
description:
  Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: RBI_I01915
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: RBI_I01916
symbol: rpsD-2
gene_biotype: protein_coding
description:
  Ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: RBI_I01917
symbol: rpsK
gene_biotype: protein_coding
description:
  Ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: RBI_I01918
symbol: rpsM
gene_biotype: protein_coding
description:
  Ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: RBI_I01920
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: RBI_I01922
symbol: pepM
gene_biotype: protein_coding
description:
  Methionine Aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: RBI_I01923
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: RBI_I01924
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: RBI_I01925
symbol: rplO
gene_biotype: protein_coding
description:
  Ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: RBI_I01927
symbol: rpsE
gene_biotype: protein_coding
description:
  Ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: RBI_I01928
symbol: rplR
gene_biotype: protein_coding
description:
  Ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: RBI_I01929
symbol: rplF
gene_biotype: protein_coding
description:
  Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: RBI_I01930
symbol: rpsH
gene_biotype: protein_coding
description:
  Ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: RBI_I01931
symbol: rpsN
gene_biotype: protein_coding
description:
  Ribosomal protein S14 type Z; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: RBI_I01932
symbol: rplE
gene_biotype: protein_coding
description:
  Ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: RBI_I01933
symbol: rplX
gene_biotype: protein_coding
description:
  Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: RBI_I01934
symbol: rplN
gene_biotype: protein_coding
description:
  Ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: RBI_I01935
symbol: rpsQ
gene_biotype: protein_coding
description:
  Ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: RBI_I01937
symbol: rplP
gene_biotype: protein_coding
description:
  Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: RBI_I01938
symbol: rpsC
gene_biotype: protein_coding
description:
  Ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: RBI_I01939
symbol: rplV
gene_biotype: protein_coding
description:
  Ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: RBI_I01940
symbol: rpsS
gene_biotype: protein_coding
description:
  Ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: RBI_I01941
symbol: rplB
gene_biotype: protein_coding
description:
  Ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: RBI_I01942
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: RBI_I01944
symbol: rplC
gene_biotype: protein_coding
description:
  Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: RBI_I01945
symbol: rpsJ
gene_biotype: protein_coding
description:
  Ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: RBI_I01951
symbol: rplA
gene_biotype: protein_coding
description:
  Ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: RBI_I01952
symbol: rplK
gene_biotype: protein_coding
description:
  Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: RBI_I01953
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: RBI_I01954
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: RBI_I01964
symbol: rsuA
gene_biotype: protein_coding
description:
  Ribosomal small subunit pseudouridine synthase A; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: RBI_I01972
symbol: aspS
gene_biotype: protein_coding
description:
  Aspartyl-tRNA synthetase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: RBI_I01977
symbol: ntpD
gene_biotype: protein_coding
description:
  V-type H+-transporting ATPase, subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: RBI_I01979
symbol: ntpB
gene_biotype: protein_coding
description:
  V-type H+-transporting ATPase, subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.


ensembl_gene_id: RBI_I01980
symbol: ntpA
gene_biotype: protein_coding
description:
  V-type H+-transporting ATPase, subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.


ensembl_gene_id: RBI_I01991
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: RBI_I02019
symbol: lexA
gene_biotype: protein_coding
description:
  Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: RBI_I02039
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.


ensembl_gene_id: RBI_I02041
symbol: gcp
gene_biotype: protein_coding
description:
  Probable O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: RBI_I02045
symbol: rsmI
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: RBI_I02046
symbol: dusB
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: RBI_I02050
symbol: glyS
gene_biotype: protein_coding
description:
  Glycyl-tRNA synthetase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: RBI_I02067
symbol: trmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: RBI_I02068
symbol: gidA
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: RBI_I02071
symbol: jag
gene_biotype: protein_coding
description:
  RNA binding protein Jag; Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division.


ensembl_gene_id: RBI_I02073
symbol: CCO05771.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: RBI_I02074
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: RBI_II00003
symbol: thiC
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.


ensembl_gene_id: RBI_II00005
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: RBI_II00007
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: RBI_II00012
symbol: pflA
gene_biotype: protein_coding
description:
  Pyruvate formate lyase activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.


ensembl_gene_id: RBI_II00015
symbol: carB
gene_biotype: protein_coding
description:
  Carbamoyl phosphate synthase large subunit/diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. Belongs to the diaminopimelate epimerase family.


ensembl_gene_id: RBI_II00016
symbol: dapL
gene_biotype: protein_coding
description:
  LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate.


ensembl_gene_id: RBI_II00023
symbol: CCO05797.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: RBI_II00030
symbol: engA
gene_biotype: protein_coding
description:
  GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: RBI_II00031
symbol: plsY
gene_biotype: protein_coding
description:
  Putative glycerol-3-phosphate acyltransferase PlsY (together with PlsX); Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: RBI_II00032
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: RBI_II00035
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: RBI_II00036
symbol: uppS
gene_biotype: protein_coding
description:
  Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: RBI_II00038
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: RBI_II00040
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: RBI_II00041
symbol: polC
gene_biotype: protein_coding
description:
  DNA polymerase III PolC, alpha subunit; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: RBI_II00042
symbol: hisZ
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: RBI_II00043
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase catalytic subunit; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: RBI_II00044
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: RBI_II00046
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: RBI_II00047
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazoleglycerol phosphate synthase, cyclase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: RBI_II00049
symbol: hisI
gene_biotype: protein_coding
description:
  phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.


ensembl_gene_id: RBI_II00052
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: RBI_II00054
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: RBI_II00056
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: RBI_II00057
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: RBI_II00058
symbol: hfq
gene_biotype: protein_coding
description:
  RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: RBI_II00060
symbol: CCO05834.1
gene_biotype: protein_coding
description:
  Pyridoxal phosphate enzyme, YggS family; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: RBI_II00061
symbol: sepF
gene_biotype: protein_coding
description:
  Cell division protein SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: RBI_II00064
symbol: lspA
gene_biotype: protein_coding
description:
  Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: RBI_II00065
symbol: rluA
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: RBI_II00078
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: RBI_II00080
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: RBI_II00081
symbol: purF-2
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: RBI_II00083
symbol: purE
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase,catalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: RBI_II00085
symbol: ksgA
gene_biotype: protein_coding
description:
  Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: RBI_II00087
symbol: glgB1
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: RBI_II00088
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase, GlgC subunit; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: RBI_II00090
symbol: glgA2
gene_biotype: protein_coding
description:
  Glycogen synthase (Glycosyltransferase Family 5 protein); Synthesizes alpha-1,4-glucan chains using ADP-glucose.


ensembl_gene_id: RBI_II00094
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: RBI_II00098
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: RBI_II00105
symbol: queH
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: RBI_II00115
symbol: recA
gene_biotype: protein_coding
description:
  Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: RBI_II00118
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: RBI_II00119
symbol: pgsA
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: RBI_II00126
symbol: dacA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: RBI_II00136
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: RBI_II00137
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: RBI_II00141
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: RBI_II00152
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.


ensembl_gene_id: RBI_II00153
symbol: ppk2
gene_biotype: protein_coding
description:
  K00937 polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: RBI_II00169
symbol: livH
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter membrane component; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: RBI_II00176
symbol: ahcY
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: RBI_II00181
symbol: alaS
gene_biotype: protein_coding
description:
  Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: RBI_II00188
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase catalytic subunit; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: RBI_II00199
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: RBI_II00200
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: RBI_II00219
symbol: cas4
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.


ensembl_gene_id: RBI_II00220
symbol: cas1
gene_biotype: protein_coding
description:
  CRISPR-associated endonuclease Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: RBI_II00221
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: RBI_II00227
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: RBI_II00228
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: RBI_II00230
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: RBI_II00233
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: RBI_II00234
symbol: mntP
gene_biotype: protein_coding
description:
  Hypothetical protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.


ensembl_gene_id: RBI_II00239
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase subunit alpha; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: RBI_II00241
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: RBI_II00251
symbol: CCO06025.1
gene_biotype: protein_coding
description:
  Hypothetical protein; ABC-type transport systems, involved in lipoprotein release, permease component.


ensembl_gene_id: RBI_II00253
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: RBI_II00261
symbol: rplM
gene_biotype: protein_coding
description:
  Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: RBI_II00270
symbol: pfkA1
gene_biotype: protein_coding
description:
  6-phosphofructokinase (ATP); Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: RBI_II00272
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: RBI_II00275
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: RBI_II00279
symbol: rpsR
gene_biotype: protein_coding
description:
  Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: RBI_II00280
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: RBI_II00281
symbol: engB
gene_biotype: protein_coding
description:
  GTPase of unknown function; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: RBI_II00284
symbol: hslO
gene_biotype: protein_coding
description:
  33 kDa chaperonin; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: RBI_II00309
symbol: clpB
gene_biotype: protein_coding
description:
  Chaperone protein ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: RBI_II00312
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: RBI_II00316
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: RBI_II00318
symbol: ce
gene_biotype: protein_coding
description:
  Cellobiose 2-epimerase; Catalyzes the reversible epimerization of cellobiose to 4-O- beta-D-glucopyranosyl-D-mannose (Glc-Man).


ensembl_gene_id: RBI_II00321
symbol: celB
gene_biotype: protein_coding
description:
  Cellulase (Glycoside Hydrolase Family 5 protein); Belongs to the glycosyl hydrolase 5 (cellulase A) family.


ensembl_gene_id: RBI_II00323
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: RBI_II00331
symbol: yjeF
gene_biotype: protein_coding
description:
  Uncharacterized protein YjeF; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of  [...]


ensembl_gene_id: RBI_II00332
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-[acyl-carrier-protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: RBI_II00337
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase (D-amino acid-tRNA deacylase); An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochiral [...]


ensembl_gene_id: RBI_II00354
symbol: dnaJ
gene_biotype: protein_coding
description:
  Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]


ensembl_gene_id: RBI_II00356
symbol: grpE
gene_biotype: protein_coding
description:
  Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...]


ensembl_gene_id: RBI_II00357
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor hrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: RBI_II00375
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: RBI_II00377
symbol: coaBC
gene_biotype: protein_coding
description:
  Coenzyme A biosynthesis bifunctional protein CoaBC; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: RBI_II00381
symbol: mscL
gene_biotype: protein_coding
description:
  Large-conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: RBI_II00388
symbol: secG
gene_biotype: protein_coding
description:
  Preprotein translocase, SecG subunit; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: RBI_II00389
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R (EC:; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: RBI_II00390
symbol: glgP
gene_biotype: protein_coding
description:
  Glycogen/starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: RBI_II00426
symbol: CCO06183.1
gene_biotype: protein_coding
description:
  Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain.


ensembl_gene_id: RBI_II00440
symbol: CCO06197.1
gene_biotype: protein_coding
description:
  Hypothetical protein; 4-aminobutyrate aminotransferase and related aminotransferases; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: RBI_II00449
symbol: potA
gene_biotype: protein_coding
description:
  Polyamine ABC transporter, ATPase component; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.


ensembl_gene_id: RBI_II00479
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.


ensembl_gene_id: RBI_II00497
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: RBI_II00501
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: RBI_II00504
symbol: iorA
gene_biotype: protein_coding
description:
  Indolepyruvate ferredoxin oxidoreductase, alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.


ensembl_gene_id: RBI_II00507
symbol: paaK
gene_biotype: protein_coding
description:
  Phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).


ensembl_gene_id: RBI_II00509
symbol: CCO06263.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: RBI_II00616
symbol: rlmH
gene_biotype: protein_coding
description:
  Hypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: RBI_II00622
symbol: ruvC
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: RBI_II00623
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: RBI_II00624
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: RBI_II00625
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: RBI_II00629
symbol: ecfA
gene_biotype: protein_coding
description:
  ABC transporter ATPase component; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: RBI_II00633
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: RBI_II00639
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: RBI_II00641
symbol: gpmI
gene_biotype: protein_coding
description:
  2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: RBI_II00643
symbol: gap
gene_biotype: protein_coding
description:
  Glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: RBI_II00647
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


# pathwayInfo

id: CL:1002
description: Mixed, incl. Peptidase M24, and Vitamin transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1002_Mixed,_incl._Peptidase_M24,_and_Vitamin_transport


id: CL:101
description: Ribosome, and Translational elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:101_Ribosome,_and_Translational_elongation


id: CL:1011
description: Nicotinate and nicotinamide metabolism, and UMP salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1011_Nicotinate_and_nicotinamide_metabolism,_and_UMP_salvage


id: CL:1013
description: Nicotinate and nicotinamide metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1013_Nicotinate_and_nicotinamide_metabolism


id: CL:1036
description: Mixed, incl. Base excision repair, and Histone-like DNA-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1036_Mixed,_incl._Base_excision_repair,_and_Histone-like_DNA-binding_protein


id: CL:1050
description: Cellular amino acid metabolic process, and Pyruvate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1050_Cellular_amino_acid_metabolic_process,_and_Pyruvate_metabolism


id: CL:1051
description: Cellular amino acid metabolic process, and Ribonucleoside monophosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1051_Cellular_amino_acid_metabolic_process,_and_Ribonucleoside_monophosphate_biosynthetic_process


id: CL:1052
description: Cellular amino acid biosynthetic process, and Transsulfuration
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1052_Cellular_amino_acid_biosynthetic_process,_and_Transsulfuration


id: CL:1053
description: Amino-acid biosynthesis, and Diaminopimelate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1053_Amino-acid_biosynthesis,_and_Diaminopimelate_metabolic_process


id: CL:1054
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Histidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1054_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Histidine_metabolism


id: CL:1055
description: Phenylalanine, tyrosine and tryptophan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1055_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis


id: CL:1075
description: Tryptophan biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1075_Tryptophan_biosynthetic_process


id: CL:108
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:108_Structural_constituent_of_ribosome


id: CL:109
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:109_Structural_constituent_of_ribosome


id: CL:1105
description: Diaminopimelate metabolic process, and Arginine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1105_Diaminopimelate_metabolic_process,_and_Arginine_metabolic_process


id: CL:1107
description: Diaminopimelate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1107_Diaminopimelate_metabolic_process


id: CL:113
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:113_Structural_constituent_of_ribosome


id: CL:1132
description: Sulfur amino acid metabolic process, and L-serine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1132_Sulfur_amino_acid_metabolic_process,_and_L-serine_biosynthetic_process


id: CL:1134
description: Sulfur amino acid metabolic process, and One-carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1134_Sulfur_amino_acid_metabolic_process,_and_One-carbon_metabolism


id: CL:1135
description: Homoserine metabolic process, and Threonine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1135_Homoserine_metabolic_process,_and_Threonine_biosynthesis


id: CL:1150
description: S-methyltransferase activity, and One-carbon metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1150_S-methyltransferase_activity,_and_One-carbon_metabolic_process


id: CL:1175
description: Ribonucleoside monophosphate biosynthetic process, and Alanine, aspartate and glutamate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1175_Ribonucleoside_monophosphate_biosynthetic_process,_and_Alanine,_aspartate_and_glutamate_metabolism


id: CL:1177
description: Ribonucleoside monophosphate biosynthetic process, and One-carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1177_Ribonucleoside_monophosphate_biosynthetic_process,_and_One-carbon_metabolism


id: CL:1178
description: Purine nucleoside monophosphate biosynthetic process, and One-carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1178_Purine_nucleoside_monophosphate_biosynthetic_process,_and_One-carbon_metabolism


id: CL:1179
description: De novo IMP biosynthetic process, and One-carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1179_De_novo_IMP_biosynthetic_process,_and_One-carbon_metabolism


id: CL:1181
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1181_De_novo_IMP_biosynthetic_process


id: CL:119
description: Mixed, incl. mRNA binding, and Small ribosomal subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:119_Mixed,_incl._mRNA_binding,_and_Small_ribosomal_subunit


id: CL:1208
description: Mixed, incl. Purine salvage, and GMP biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1208_Mixed,_incl._Purine_salvage,_and_GMP_biosynthesis


id: CL:1222
description: De novo UMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1222_De_novo_UMP_biosynthetic_process


id: CL:1225
description: De novo UMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1225_De_novo_UMP_biosynthetic_process


id: CL:1248
description: Nitrogen metabolism, and L-glutamine aminotransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1248_Nitrogen_metabolism,_and_L-glutamine_aminotransferase_activity


id: CL:1250
description: Glutamate biosynthetic process, and Ammonia ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1250_Glutamate_biosynthetic_process,_and_Ammonia_ligase_activity


id: CL:1274
description: Pyruvate metabolism, and Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1274_Pyruvate_metabolism,_and_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:1275
description: Valine, leucine and isoleucine biosynthesis, and Citrate cycle (TCA cycle)
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1275_Valine,_leucine_and_isoleucine_biosynthesis,_and_Citrate_cycle_(TCA_cycle)


id: CL:1276
description: Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1276_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:1325
description: Fatty acid biosynthesis, and Propanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1325_Fatty_acid_biosynthesis,_and_Propanoate_metabolism


id: CL:1328
description: CoA carboxylase activity, and Tyrosine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1328_CoA_carboxylase_activity,_and_Tyrosine_metabolism


id: CL:1367
description: Mixed, incl. Starch and sucrose metabolism, and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1367_Mixed,_incl._Starch_and_sucrose_metabolism,_and_Pentose_phosphate_pathway


id: CL:1369
description: Mixed, incl. Starch and sucrose metabolism, and Pentose phosphate pathway
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1369_Mixed,_incl._Starch_and_sucrose_metabolism,_and_Pentose_phosphate_pathway


id: CL:1370
description: Mixed, incl. Pentose phosphate pathway, and Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1370_Mixed,_incl._Pentose_phosphate_pathway,_and_Phosphotransferase_system_(PTS)


id: CL:1371
description: Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1371_Pentose_phosphate_pathway,_and_Glycolysis


id: CL:1373
description: Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1373_Pentose_phosphate_pathway,_and_Glycolysis


id: CL:1376
description: Glycolysis, and Aldehyde-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1376_Glycolysis,_and_Aldehyde-lyase_activity


id: CL:1387
description: Phosphofructokinase, and Gluconeogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1387_Phosphofructokinase,_and_Gluconeogenesis


id: CL:1399
description: NADPH regeneration, and Lactose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1399_NADPH_regeneration,_and_Lactose_metabolic_process


id: CL:1421
description: Phosphotransferase system (PTS), and Disaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1421_Phosphotransferase_system_(PTS),_and_Disaccharide_metabolic_process


id: CL:1435
description: Glucose permease domain IIB, and Disaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1435_Glucose_permease_domain_IIB,_and_Disaccharide_metabolic_process


id: CL:144
description: Large ribosomal subunit, and rRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:144_Large_ribosomal_subunit,_and_rRNA-binding


id: CL:1451
description: Glycogen metabolic process, and Carbohydrate phosphorylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1451_Glycogen_metabolic_process,_and_Carbohydrate_phosphorylase


id: CL:1452
description: Carbohydrate phosphorylase, and Glycosyl hydrolase, family 13, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1452_Carbohydrate_phosphorylase,_and_Glycosyl_hydrolase,_family_13,_catalytic_domain


id: CL:147
description: Large ribosomal subunit, and rRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:147_Large_ribosomal_subunit,_and_rRNA-binding


id: CL:1490
description: Mixed, incl. Sulfur relay system, and Thiamine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1490_Mixed,_incl._Sulfur_relay_system,_and_Thiamine_biosynthetic_process


id: CL:1491
description: Mixed, incl. Sulfur relay system, and Peptidase S1C
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1491_Mixed,_incl._Sulfur_relay_system,_and_Peptidase_S1C


id: CL:1492
description: Mixed, incl. Sulfur relay system, and Peptidase S1C
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1492_Mixed,_incl._Sulfur_relay_system,_and_Peptidase_S1C


id: CL:1494
description: Mixed, incl. Sulfur relay system, and Heme
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1494_Mixed,_incl._Sulfur_relay_system,_and_Heme


id: CL:1506
description: Mixed, incl. Peptidase S1C, and MPN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1506_Mixed,_incl._Peptidase_S1C,_and_MPN_domain


id: CL:1518
description: Iron-sulfur cluster assembly, and Sulfurtransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1518_Iron-sulfur_cluster_assembly,_and_Sulfurtransferase_activity


id: CL:1549
description: Mixed, incl. Chromosome segregation, and Pseudouridine synthase, RsuA/RluB/E/F
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1549_Mixed,_incl._Chromosome_segregation,_and_Pseudouridine_synthase,_RsuA/RluB/E/F


id: CL:1550
description: Mixed, incl. Chromosome partition, and Pseudouridine synthase, RsuA/RluB/E/F
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1550_Mixed,_incl._Chromosome_partition,_and_Pseudouridine_synthase,_RsuA/RluB/E/F


id: CL:1552
description: Mixed, incl. Chromosome partition, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1552_Mixed,_incl._Chromosome_partition,_and_AAA_domain


id: CL:1570
description: Benzoate degradation, and LSM domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1570_Benzoate_degradation,_and_LSM_domain_superfamily


id: CL:1581
description: Mixed, incl. Bile acid metabolic process, and Undecaprenyl-diphosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1581_Mixed,_incl._Bile_acid_metabolic_process,_and_Undecaprenyl-diphosphatase_activity


id: CL:1594
description: Mixed, incl. Porphyrin biosynthesis, and Coenzyme A metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1594_Mixed,_incl._Porphyrin_biosynthesis,_and_Coenzyme_A_metabolic_process


id: CL:1595
description: Mixed, incl. Coenzyme A metabolic process, and Nitroreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1595_Mixed,_incl._Coenzyme_A_metabolic_process,_and_Nitroreductase


id: CL:1597
description: Coenzyme A metabolic process, and Fn3 associated
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1597_Coenzyme_A_metabolic_process,_and_Fn3_associated


id: CL:1614
description: Mixed, incl. CNNM, transmembrane domain, and Cytoskeleton-dependent cytokinesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1614_Mixed,_incl._CNNM,_transmembrane_domain,_and_Cytoskeleton-dependent_cytokinesis


id: CL:162
description: Mixed, incl. Nucleotide-binding alpha-beta plait domain superfamily, and Large ribosomal subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:162_Mixed,_incl._Nucleotide-binding_alpha-beta_plait_domain_superfamily,_and_Large_ribosomal_subunit


id: CL:1626
description: Porphyrin biosynthesis, and Type I restriction modification DNA specificity domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1626_Porphyrin_biosynthesis,_and_Type_I_restriction_modification_DNA_specificity_domain


id: CL:1646
description: Mixed, incl. CarD-like/TRCF domain, and Carboxylic ester hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1646_Mixed,_incl._CarD-like/TRCF_domain,_and_Carboxylic_ester_hydrolase_activity


id: CL:1658
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1658_Mixed,_incl._Electron_transport_chain,_and_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors

description:
  Mixed, incl. Electron transport chain, and Oxidoreductase activity, acting on iron-sulfur proteins as donors


id: CL:1659
description: Mixed, incl. Electron transport chain, and Peptidase M16, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1659_Mixed,_incl._Electron_transport_chain,_and_Peptidase_M16,_C-terminal


id: CL:1660
description: Mixed, incl. 4Fe-4S ferredoxin-type, iron-sulphur binding domain, and Peptidase M16, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1660_Mixed,_incl._4Fe-4S_ferredoxin-type,_iron-sulphur_binding_domain,_and_Peptidase_M16,_C-terminal


id: CL:1662
description: 4Fe-4S ferredoxin, iron-sulphur binding, conserved site, and Peptidase M16, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1662_4Fe-4S_ferredoxin,_iron-sulphur_binding,_conserved_site,_and_Peptidase_M16,_C-terminal


id: CL:1679
description: Pyruvate ferredoxin/flavodoxin oxidoreductase, and CoA-ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1679_Pyruvate_ferredoxin/flavodoxin_oxidoreductase,_and_CoA-ligase_activity


id: CL:1689
description: Mixed, incl. Electron transport, and Porphyrin and chlorophyll metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1689_Mixed,_incl._Electron_transport,_and_Porphyrin_and_chlorophyll_metabolism


id: CL:1717
description: Mixed, incl. Oxidoreductase activity, acting on iron-sulfur proteins as donors, and ATPase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1717_Mixed,_incl._Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_and_ATPase_complex


id: CL:1720
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1720_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: CL:1750
description: Mixed, incl. Cell differentiation, and Membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1750_Mixed,_incl._Cell_differentiation,_and_Membrane


id: CL:1751
description: Mixed, incl. Cell differentiation, and Membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1751_Mixed,_incl._Cell_differentiation,_and_Membrane


id: CL:1752
description: Mixed, incl. Cell differentiation, and Carboxypeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1752_Mixed,_incl._Cell_differentiation,_and_Carboxypeptidase


id: CL:1753
description: Mixed, incl. Cell differentiation, and Cellular response to chemical stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1753_Mixed,_incl._Cell_differentiation,_and_Cellular_response_to_chemical_stimulus


id: CL:1754
description: Mixed, incl. Cell differentiation, and Cellular response to chemical stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1754_Mixed,_incl._Cell_differentiation,_and_Cellular_response_to_chemical_stimulus


id: CL:1755
description: Cell differentiation, and Cellular response to chemical stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1755_Cell_differentiation,_and_Cellular_response_to_chemical_stimulus


id: CL:1756
description: Cell differentiation, and Cellular response to chemical stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1756_Cell_differentiation,_and_Cellular_response_to_chemical_stimulus


id: CL:1758
description: Cell differentiation, and Virion
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1758_Cell_differentiation,_and_Virion


id: CL:1760
description: Cell differentiation, and Virion
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1760_Cell_differentiation,_and_Virion


id: CL:1770
description: Stage III sporulation protein AC/AD family, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1770_Stage_III_sporulation_protein_AC/AD_family,_and_Sporulation


id: CL:1789
description: Mixed, incl. SpoVA, and Calcium ion binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1789_Mixed,_incl._SpoVA,_and_Calcium_ion_binding


id: CL:1827
description: Spore germination, and Protein of unknown function DUF421
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1827_Spore_germination,_and_Protein_of_unknown_function_DUF421


id: CL:1842
description: Mixed, incl. Response to hydrogen peroxide, and Domain of unknown function DUF2179
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1842_Mixed,_incl._Response_to_hydrogen_peroxide,_and_Domain_of_unknown_function_DUF2179


id: CL:1854
description: Mixed, incl. Endospore-forming forespore, and Septum formation initiator
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1854_Mixed,_incl._Endospore-forming_forespore,_and_Septum_formation_initiator


id: CL:1868
description: Mixed, incl. Flavoprotein, and Xylose isomerase-like TIM barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1868_Mixed,_incl._Flavoprotein,_and_Xylose_isomerase-like_TIM_barrel


id: CL:1884
description: Mixed, incl. Protein of unknown function DUF421, and Chloride transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1884_Mixed,_incl._Protein_of_unknown_function_DUF421,_and_Chloride_transport


id: CL:1896
description: Mixed, incl. PRC-barrel domain, and Lytic endotransglycosylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1896_Mixed,_incl._PRC-barrel_domain,_and_Lytic_endotransglycosylase_activity


id: CL:1910
description: Carboxypeptidase, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1910_Carboxypeptidase,_and_ABC-2_family_transporter_protein


id: CL:1935
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1935_Mostly_uncharacterized,_incl._Acyltransferase_activity,_and_ATPase-coupled_transmembrane_transporter_activity

description:
  Mostly uncharacterized, incl. Acyltransferase activity, and ATPase-coupled transmembrane transporter activity


id: CL:1936
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1936_Mostly_uncharacterized,_incl._ATPase-coupled_transmembrane_transporter_activity,_and_protein-DNA_complex

description:
  Mostly uncharacterized, incl. ATPase-coupled transmembrane transporter activity, and protein-DNA complex


id: CL:1937
description: Mostly uncharacterized, incl. protein-DNA complex, and Protein processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1937_Mostly_uncharacterized,_incl._protein-DNA_complex,_and_Protein_processing


id: CL:1938
description: Mostly uncharacterized, incl. protein-DNA complex, and Protein processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1938_Mostly_uncharacterized,_incl._protein-DNA_complex,_and_Protein_processing


id: CL:1940
description: Mostly uncharacterized, incl. protein-DNA complex, and Protein processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1940_Mostly_uncharacterized,_incl._protein-DNA_complex,_and_Protein_processing


id: CL:1942
description: Mostly uncharacterized, incl. Protein processing, and protein-DNA complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1942_Mostly_uncharacterized,_incl._Protein_processing,_and_protein-DNA_complex


id: CL:1944
description: Mostly uncharacterized, incl. Protein processing, and LysM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1944_Mostly_uncharacterized,_incl._Protein_processing,_and_LysM_domain


id: CL:1946
description: Mostly uncharacterized, incl. LysM domain, and Bacterial PH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1946_Mostly_uncharacterized,_incl._LysM_domain,_and_Bacterial_PH_domain


id: CL:1947
description: Mostly uncharacterized, incl. LysM domain, and Septum formation initiator
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1947_Mostly_uncharacterized,_incl._LysM_domain,_and_Septum_formation_initiator


id: CL:1951
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1951_Mixed,_incl._Trigger_factor/SurA_domain_superfamily,_and_Organic_cation_transmembrane_transporter_activity

description:
  Mixed, incl. Trigger factor/SurA domain superfamily, and Organic cation transmembrane transporter activity


id: CL:197
description: Mixed, incl. Large ribosomal subunit rRNA binding, and Translation regulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:197_Mixed,_incl._Large_ribosomal_subunit_rRNA_binding,_and_Translation_regulation


id: CL:1973
description: Mixed, incl. Bacterial PH domain, and Phage portal protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:1973_Mixed,_incl._Bacterial_PH_domain,_and_Phage_portal_protein


id: CL:2000
description: Mixed, incl. HhH-GPD domain, and Regulation of DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2000_Mixed,_incl._HhH-GPD_domain,_and_Regulation_of_DNA_replication


id: CL:2041
description: Mixed, incl. ABC-2 family transporter protein, and ABC transporter-like, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2041_Mixed,_incl._ABC-2_family_transporter_protein,_and_ABC_transporter-like,_ATP-binding_domain


id: CL:2055
description: Mixed, incl. Bacterial PH domain, and Glycosyl hydrolases family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2055_Mixed,_incl._Bacterial_PH_domain,_and_Glycosyl_hydrolases_family_2


id: CL:2071
description: Mixed, incl. DHHW protein, and Membrane bound O-acyl transferase, MBOAT
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2071_Mixed,_incl._DHHW_protein,_and_Membrane_bound_O-acyl_transferase,_MBOAT


id: CL:2072
description: Mixed, incl. DHHW protein, and Membrane bound O-acyl transferase, MBOAT
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2072_Mixed,_incl._DHHW_protein,_and_Membrane_bound_O-acyl_transferase,_MBOAT


id: CL:2074
description: Mixed, incl. Alginate O-acetyltransferase AlgI, and Protein of unknown function DUF4358
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2074_Mixed,_incl._Alginate_O-acetyltransferase_AlgI,_and_Protein_of_unknown_function_DUF4358


id: CL:2088
description: Mixed, incl. Methyltransferase small domain, and DHHW protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2088_Mixed,_incl._Methyltransferase_small_domain,_and_DHHW_protein


id: CL:2098
description: Mixed, incl. ELP3/YhcC, and MnmG, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2098_Mixed,_incl._ELP3/YhcC,_and_MnmG,_N-terminal_domain


id: CL:2108
description: Mixed, incl. FldB/FldC dehydratase alpha/beta subunit, and Isomerase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2108_Mixed,_incl._FldB/FldC_dehydratase_alpha/beta_subunit,_and_Isomerase_activity


id: CL:2109
description: Mixed, incl. FldB/FldC dehydratase alpha/beta subunit, and Aldose 1-epimerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2109_Mixed,_incl._FldB/FldC_dehydratase_alpha/beta_subunit,_and_Aldose_1-epimerase


id: CL:2111
description: Mixed, incl. TatD related DNase, and Bacterial SH3 domain homologues
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2111_Mixed,_incl._TatD_related_DNase,_and_Bacterial_SH3_domain_homologues


id: CL:2133
description: Mixed, incl. Pentapeptide repeat, and Phosphoric diester hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2133_Mixed,_incl._Pentapeptide_repeat,_and_Phosphoric_diester_hydrolase_activity


id: CL:214
description: L28p-like, and Zinc-binding ribosomal protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:214_L28p-like,_and_Zinc-binding_ribosomal_protein


id: CL:2149
description: Mixed, incl. DNA topoisomerase, type IIA-like domain superfamily, and Protein kinase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2149_Mixed,_incl._DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_Protein_kinase_domain


id: CL:2168
description: Mixed, incl. Signal transduction, and Reverse transcriptase/Diguanylate cyclase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2168_Mixed,_incl._Signal_transduction,_and_Reverse_transcriptase/Diguanylate_cyclase_domain


id: CL:2169
description: Mixed, incl. Signal transduction, and Reverse transcriptase/Diguanylate cyclase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2169_Mixed,_incl._Signal_transduction,_and_Reverse_transcriptase/Diguanylate_cyclase_domain


id: CL:2170
description: Signal transduction, and Reverse transcriptase/Diguanylate cyclase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2170_Signal_transduction,_and_Reverse_transcriptase/Diguanylate_cyclase_domain


id: CL:2172
description: Signal transduction, and Reverse transcriptase/Diguanylate cyclase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2172_Signal_transduction,_and_Reverse_transcriptase/Diguanylate_cyclase_domain


id: CL:2173
description: Signal transduction, and Reverse transcriptase/Diguanylate cyclase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2173_Signal_transduction,_and_Reverse_transcriptase/Diguanylate_cyclase_domain


id: CL:2174
description: Reverse transcriptase/Diguanylate cyclase domain, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2174_Reverse_transcriptase/Diguanylate_cyclase_domain,_and_Bacterial_chemotaxis


id: CL:2177
description: Reverse transcriptase/Diguanylate cyclase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2177_Reverse_transcriptase/Diguanylate_cyclase_domain


id: CL:2180
description: EAL domain, and HPT domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2180_EAL_domain,_and_HPT_domain_superfamily


id: CL:2218
description: Two-component regulatory system
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2218_Two-component_regulatory_system


id: CL:2220
description: Two-component regulatory system
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2220_Two-component_regulatory_system


id: CL:2243
description: Mixed, incl. Peptidyl-glutamine methylation, and Regulation of response to stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2243_Mixed,_incl._Peptidyl-glutamine_methylation,_and_Regulation_of_response_to_stimulus


id: CL:2282
description: Mixed, incl. Prokaryotic N-terminal methylation site, and Type II/IV secretion system protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2282_Mixed,_incl._Prokaryotic_N-terminal_methylation_site,_and_Type_II/IV_secretion_system_protein


id: CL:2283
description: Pilin-like, and Type II/IV secretion system protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2283_Pilin-like,_and_Type_II/IV_secretion_system_protein


id: CL:2294
description: Prokaryotic N-terminal methylation site, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2294_Prokaryotic_N-terminal_methylation_site,_and_Cell_division


id: CL:2304
description: Mixed, incl. Lysozyme activity, and Phosphorelay sensor kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2304_Mixed,_incl._Lysozyme_activity,_and_Phosphorelay_sensor_kinase_activity


id: CL:2313
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2313_Mostly_uncharacterized,_incl._RNA_polymerase_sigma-70_like,_and_Glyoxylate_and_dicarboxylate_metabolism

description:
  Mostly uncharacterized, incl. RNA polymerase sigma-70 like, and Glyoxylate and dicarboxylate metabolism


id: CL:2314
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and Quinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2314_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_Quinone_metabolic_process


id: CL:2315
description: Mostly uncharacterized, incl. Quinone metabolic process, and Protein acylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2315_Mostly_uncharacterized,_incl._Quinone_metabolic_process,_and_Protein_acylation


id: CL:2316
description: Mixed, incl. Protein acylation, and Met-10+ like-protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2316_Mixed,_incl._Protein_acylation,_and_Met-10+_like-protein


id: CL:2318
description: Mixed, incl. Protein acylation, and Met-10+ like-protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2318_Mixed,_incl._Protein_acylation,_and_Met-10+_like-protein


id: CL:2335
description: Mixed, incl. TatD related DNase, and Quinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2335_Mixed,_incl._TatD_related_DNase,_and_Quinone_metabolic_process


id: CL:2347
description: tRNA threonylcarbamoyladenosine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2347_tRNA_threonylcarbamoyladenosine_modification


id: CL:2363
description: Mixed, incl. RNA polymerase sigma-70 like, and Proline biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2363_Mixed,_incl._RNA_polymerase_sigma-70_like,_and_Proline_biosynthesis


id: CL:2364
description: Mixed, incl. Proline biosynthesis, and Inorganic diphosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2364_Mixed,_incl._Proline_biosynthesis,_and_Inorganic_diphosphatase_activity


id: CL:2366
description: Proline biosynthesis, and Rubrerythrin
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2366_Proline_biosynthesis,_and_Rubrerythrin


id: CL:2387
description: Mixed, incl. Sigma-70, region 4, and Outer membrane-bounded periplasmic space
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2387_Mixed,_incl._Sigma-70,_region_4,_and_Outer_membrane-bounded_periplasmic_space


id: CL:2388
description: Mixed, incl. Von Willebrand factor, type A, and Transcriptional regulatory protein LytR-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2388_Mixed,_incl._Von_Willebrand_factor,_type_A,_and_Transcriptional_regulatory_protein_LytR-like


id: CL:2397
description: Outer membrane-bounded periplasmic space, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2397_Outer_membrane-bounded_periplasmic_space,_and_Sigma-70,_region_4


id: CL:2406
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2406_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Phosphotransferase_activity,_for_other_substituted_phosphate_groups

description:
  Mixed, incl. Polysaccharide biosynthetic process, and Phosphotransferase activity, for other substituted phosphate groups


id: CL:2407
description: Mixed, incl. Polysaccharide biosynthetic process, and Propanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2407_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Propanoate_metabolism


id: CL:2408
description: Mixed, incl. Polysaccharide biosynthetic process, and CDP-glycerol glycerophosphotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2408_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_CDP-glycerol_glycerophosphotransferase


id: CL:2409
description: Polysaccharide biosynthetic process, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2409_Polysaccharide_biosynthetic_process,_and_Nucleotide-diphospho-sugar_transferases


id: CL:2412
description: Polysaccharide biosynthetic process, and Trimeric LpxA-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2412_Polysaccharide_biosynthetic_process,_and_Trimeric_LpxA-like_superfamily


id: CL:2413
description: Polysaccharide biosynthetic process, and O-Antigen ligase
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2413_Polysaccharide_biosynthetic_process,_and_O-Antigen_ligase


id: CL:2415
description: O-Antigen nucleotide sugar biosynthesis, and Polysaccharide biosynthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2415_O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_biosynthesis_protein


id: CL:2431
description: Mixed, incl. O-Antigen ligase, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2431_Mixed,_incl._O-Antigen_ligase,_and_Glycosyl_transferase_family_2


id: CL:2440
description: Mixed, incl. Bacterial sugar transferase, and Hexapeptide repeat of succinyl-transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2440_Mixed,_incl._Bacterial_sugar_transferase,_and_Hexapeptide_repeat_of_succinyl-transferase


id: CL:2455
description: MobA-like NTP transferase, and Polysaccharide biosynthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2455_MobA-like_NTP_transferase,_and_Polysaccharide_biosynthesis_protein


id: CL:2466
description: Mixed, incl. CDP-glycerol glycerophosphotransferase, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2466_Mixed,_incl._CDP-glycerol_glycerophosphotransferase,_and_AAA_domain


id: CL:2467
description: Mixed, incl. AAA domain, and CDP-glycerol glycerophosphotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2467_Mixed,_incl._AAA_domain,_and_CDP-glycerol_glycerophosphotransferase


id: CL:2469
description: AAA domain, and 5-3 DNA helicase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2469_AAA_domain,_and_5-3_DNA_helicase_activity


id: CL:2483
description: Mixed, incl. xxxLxxG heptad repeat, and DNA-binding HTH domain, TetR-type, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2483_Mixed,_incl._xxxLxxG_heptad_repeat,_and_DNA-binding_HTH_domain,_TetR-type,_conserved_site


id: CL:2493
description: Mixed, incl. Glycosyltransferase like family 2, and Protein alkylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2493_Mixed,_incl._Glycosyltransferase_like_family_2,_and_Protein_alkylation


id: CL:2510
description: Mixed, incl. Iron-containing alcohol dehydrogenase, and VanZ-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2510_Mixed,_incl._Iron-containing_alcohol_dehydrogenase,_and_VanZ-like


id: CL:2512
description: Glycerol dehydrogenase, and MGS-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2512_Glycerol_dehydrogenase,_and_MGS-like_domain


id: CL:2538
description: Mixed, incl. Peptidase S26A, signal peptidase I, and Collagen binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2538_Mixed,_incl._Peptidase_S26A,_signal_peptidase_I,_and_Collagen_binding


id: CL:2539
description: Mixed, incl. Peptidase S26A, signal peptidase I, and Collagen binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2539_Mixed,_incl._Peptidase_S26A,_signal_peptidase_I,_and_Collagen_binding


id: CL:2541
description: Mixed, incl. Peptidase S26A, signal peptidase I, and Cna protein B-type domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2541_Mixed,_incl._Peptidase_S26A,_signal_peptidase_I,_and_Cna_protein_B-type_domain


id: CL:2543
description: Peptidase S26A, signal peptidase I, and RNA-DNA hybrid ribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2543_Peptidase_S26A,_signal_peptidase_I,_and_RNA-DNA_hybrid_ribonuclease_activity


id: CL:2553
description: Cna protein B-type domain, and Sortase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2553_Cna_protein_B-type_domain,_and_Sortase_domain


id: CL:2578
description: Mixed, incl. Cupin 2, conserved barrel, and EamA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2578_Mixed,_incl._Cupin_2,_conserved_barrel,_and_EamA_domain


id: CL:258
description: Protein targeting, and Protein carrier chaperone
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:258_Protein_targeting,_and_Protein_carrier_chaperone


id: CL:2589
description: Mixed, incl. HAD-like superfamily, and Polyphosphate kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2589_Mixed,_incl._HAD-like_superfamily,_and_Polyphosphate_kinase_activity


id: CL:2590
description: Mixed, incl. Polyphosphate kinase activity, and HAD-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2590_Mixed,_incl._Polyphosphate_kinase_activity,_and_HAD-like_superfamily


id: CL:2591
description: Mixed, incl. Polyphosphate kinase activity, and Cardiolipin synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2591_Mixed,_incl._Polyphosphate_kinase_activity,_and_Cardiolipin_synthase


id: CL:2594
description: PLD-like domain, and Cardiolipin synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2594_PLD-like_domain,_and_Cardiolipin_synthase


id: CL:2616
description: Mixed, incl. Cof family, and RNA 3-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2616_Mixed,_incl._Cof_family,_and_RNA_3-end_processing


id: CL:2627
description: Mostly uncharacterized, incl. Acyl carrier activity, and Domain of unknown function DUF262
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2627_Mostly_uncharacterized,_incl._Acyl_carrier_activity,_and_Domain_of_unknown_function_DUF262


id: CL:2628
description: Mixed, incl. Acyl carrier activity, and SGNH hydrolase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2628_Mixed,_incl._Acyl_carrier_activity,_and_SGNH_hydrolase_superfamily


id: CL:2641
description: Mixed, incl. Domain of unknown function DUF262, and C-5 cytosine methyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2641_Mixed,_incl._Domain_of_unknown_function_DUF262,_and_C-5_cytosine_methyltransferase


id: CL:2650
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2650_Mixed,_incl._Deoxyribonucleotide_metabolic_process,_and_Ribonucleoside-triphosphate_reductase_activity

description:
  Mixed, incl. Deoxyribonucleotide metabolic process, and Ribonucleoside-triphosphate reductase activity


id: CL:2651
description: Mixed, incl. Deoxyribonucleotide biosynthetic process, and Chromate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2651_Mixed,_incl._Deoxyribonucleotide_biosynthetic_process,_and_Chromate_transport


id: CL:2652
description: Mixed, incl. Deoxyribonucleotide biosynthetic process, and Peptidase U32
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2652_Mixed,_incl._Deoxyribonucleotide_biosynthetic_process,_and_Peptidase_U32


id: CL:2653
description: Mixed, incl. Deoxyribonucleotide biosynthetic process, and Peptidase U32
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2653_Mixed,_incl._Deoxyribonucleotide_biosynthetic_process,_and_Peptidase_U32


id: CL:2655
description: Mixed, incl. Peptidase U32, and Cyclo-ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2655_Mixed,_incl._Peptidase_U32,_and_Cyclo-ligase_activity


id: CL:2665
description: Deoxyribonucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2665_Deoxyribonucleotide_biosynthetic_process


id: CL:2675
description: ABC transporter-like, conserved site, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2675_ABC_transporter-like,_conserved_site,_and_Signal


id: CL:2686
description: Chromate transport, and Cytidylate kinase-like family
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2686_Chromate_transport,_and_Cytidylate_kinase-like_family


id: CL:2698
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2698_Mixed,_incl._Triphosphoric_monoester_hydrolase_activity,_and_Ribonucleoside-triphosphate_reductase_activity

description:
  Mixed, incl. Triphosphoric monoester hydrolase activity, and Ribonucleoside-triphosphate reductase activity


id: CL:2700
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2700_Ribonucleoside-triphosphate_reductase_activity,_and_Ribonucleoside-triphosphate_reductase_activating,_anaerobic

description:
  Ribonucleoside-triphosphate reductase activity, and Ribonucleoside-triphosphate reductase activating, anaerobic


id: CL:2721
description: Mostly uncharacterized, incl. Alditol metabolic process, and Calcium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2721_Mostly_uncharacterized,_incl._Alditol_metabolic_process,_and_Calcium_ion_transport


id: CL:2722
description: Mostly uncharacterized, incl. Calcium ion transport, and Iron-type alcohol dehydrogenase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2722_Mostly_uncharacterized,_incl._Calcium_ion_transport,_and_Iron-type_alcohol_dehydrogenase-like


id: CL:2723
description: Mostly uncharacterized, incl. Calcium ion transport, and Peptidase C1A
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2723_Mostly_uncharacterized,_incl._Calcium_ion_transport,_and_Peptidase_C1A


id: CL:2725
description: Mixed, incl. Lysine degradation, and Aldehyde dehydrogenase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2725_Mixed,_incl._Lysine_degradation,_and_Aldehyde_dehydrogenase_domain


id: CL:2742
description: Mixed, incl. Cellulose binding, and CYTH-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2742_Mixed,_incl._Cellulose_binding,_and_CYTH-like_domain_superfamily


id: CL:2758
description: Mixed, incl. Iron-type alcohol dehydrogenase-like, and Protein acylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2758_Mixed,_incl._Iron-type_alcohol_dehydrogenase-like,_and_Protein_acylation


id: CL:2771
description: Mixed, incl. Alditol metabolic process, and Alkaline shock protein Asp23
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2771_Mixed,_incl._Alditol_metabolic_process,_and_Alkaline_shock_protein_Asp23


id: CL:2791
description: Mixed, incl. Hydrolase activity, hydrolyzing O-glycosyl compounds, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2791_Mixed,_incl._Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds,_and_Signal


id: CL:2792
description: Mixed, incl. Hydrolase activity, hydrolyzing O-glycosyl compounds, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2792_Mixed,_incl._Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds,_and_Signal


id: CL:2793
description: Mixed, incl. Hydrolase activity, hydrolyzing O-glycosyl compounds, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2793_Mixed,_incl._Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds,_and_Signal


id: CL:2794
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2794_Mixed,_incl._Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds,_and_Carbohydrate_esterase_2,_N-terminal

description:
  Mixed, incl. Hydrolase activity, hydrolyzing O-glycosyl compounds, and Carbohydrate esterase 2, N-terminal


id: CL:2796
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2796_Mixed,_incl._Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds,_and_Carbohydrate_esterase_2,_N-terminal

description:
  Mixed, incl. Hydrolase activity, hydrolyzing O-glycosyl compounds, and Carbohydrate esterase 2, N-terminal


id: CL:2798
description: Mixed, incl. Glycosidase, and Carbohydrate esterase 2, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2798_Mixed,_incl._Glycosidase,_and_Carbohydrate_esterase_2,_N-terminal


id: CL:2799
description: Glycosidase, and Carbohydrate esterase 2, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2799_Glycosidase,_and_Carbohydrate_esterase_2,_N-terminal


id: CL:280
description: RNA polymerase, and RNA polymerase sigma-70
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:280_RNA_polymerase,_and_RNA_polymerase_sigma-70


id: CL:2800
description: Glycosidase, and Six-hairpin glycosidase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2800_Glycosidase,_and_Six-hairpin_glycosidase_superfamily


id: CL:2801
description: Mixed, incl. Glycoside hydrolase, family 5, and Mannosidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2801_Mixed,_incl._Glycoside_hydrolase,_family_5,_and_Mannosidase_activity


id: CL:2802
description: Glycoside hydrolase, family 5, and Fibronectin type III-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2802_Glycoside_hydrolase,_family_5,_and_Fibronectin_type_III-like_domain


id: CL:2825
description: Mixed, incl. Mannosidase activity, and Carbohydrate esterase 2, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2825_Mixed,_incl._Mannosidase_activity,_and_Carbohydrate_esterase_2,_N-terminal


id: CL:2828
description: Mannosidase activity, and Carbohydrate binding module 65 domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2828_Mannosidase_activity,_and_Carbohydrate_binding_module_65_domain_1


id: CL:2845
description: Arabinose metabolic process, and Glycosyl hydrolases family 43
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2845_Arabinose_metabolic_process,_and_Glycosyl_hydrolases_family_43


id: CL:2859
description: Mixed, incl. Cellulose binding, and CtCE2-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2859_Mixed,_incl._Cellulose_binding,_and_CtCE2-like_domain


id: CL:2870
description: Mixed, incl. Fn3 associated, and Pretoxin HINT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2870_Mixed,_incl._Fn3_associated,_and_Pretoxin_HINT_domain


id: CL:2883
description: Mixed, incl. Hint domain N-terminal, and Thylakoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2883_Mixed,_incl._Hint_domain_N-terminal,_and_Thylakoid


id: CL:2886
description: Mixed, incl. Thylakoid, and DNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2886_Mixed,_incl._Thylakoid,_and_DNA_ligase_activity


id: CL:2917
description: Mixed, incl. MetI-like superfamily, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2917_Mixed,_incl._MetI-like_superfamily,_and_Bacterial_extracellular_solute-binding_protein


id: CL:2918
description: Mixed, incl. MetI-like superfamily, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2918_Mixed,_incl._MetI-like_superfamily,_and_Bacterial_extracellular_solute-binding_protein


id: CL:2920
description: Mixed, incl. MetI-like superfamily, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2920_Mixed,_incl._MetI-like_superfamily,_and_Bacterial_extracellular_solute-binding_protein


id: CL:2922
description: Mixed, incl. MetI-like superfamily, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2922_Mixed,_incl._MetI-like_superfamily,_and_Bacterial_extracellular_solute-binding_protein


id: CL:2923
description: MetI-like superfamily, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2923_MetI-like_superfamily,_and_Bacterial_extracellular_solute-binding_protein


id: CL:2925
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2925_Mixed,_incl._ABC-type_maltose_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein

description:
  Mixed, incl. ABC-type maltose transporter activity, and Bacterial extracellular solute-binding protein


id: CL:2928
description: ABC-type maltose transporter activity, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2928_ABC-type_maltose_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein


id: CL:2947
description: Mixed, incl. ABC-type maltose transporter activity, and Molybdate/tungstate binding, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2947_Mixed,_incl._ABC-type_maltose_transporter_activity,_and_Molybdate/tungstate_binding,_C-terminal


id: CL:2960
description: Mixed, incl. Membrane raft, and NAD dependent epimerase/dehydratase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2960_Mixed,_incl._Membrane_raft,_and_NAD_dependent_epimerase/dehydratase_family


id: CL:2975
description: Mixed, incl. Lipase activity, and DNA methylation on adenine
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2975_Mixed,_incl._Lipase_activity,_and_DNA_methylation_on_adenine


id: CL:2977
description: Mixed, incl. PAS domain, and Bacterial repeat domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:2977_Mixed,_incl._PAS_domain,_and_Bacterial_repeat_domain


id: CL:300
description: Mixed, incl. Transposase IS200 like, and tRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:300_Mixed,_incl._Transposase_IS200_like,_and_tRNA_pseudouridine_synthesis


id: CL:3014
description: Mixed, incl. Symport, and Cation/H+ exchanger
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3014_Mixed,_incl._Symport,_and_Cation/H+_exchanger


id: CL:3025
description: Mixed, incl. WYL domain, and Transposon Tn1545/Tn916, excisionase
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3025_Mixed,_incl._WYL_domain,_and_Transposon_Tn1545/Tn916,_excisionase


id: CL:3036
description: Mixed, incl. DDE transposase retroviral integrase sub-family, and Lipase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3036_Mixed,_incl._DDE_transposase_retroviral_integrase_sub-family,_and_Lipase_activity


id: CL:3047
description: Mostly uncharacterized, incl. Peptidoglycan metabolic process, and Peptidase S26B
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3047_Mostly_uncharacterized,_incl._Peptidoglycan_metabolic_process,_and_Peptidase_S26B


id: CL:3048
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3048_Mostly_uncharacterized,_incl._L,D-transpeptidase_catalytic_domain,_and_ABC-2_family_transporter_protein

description:
  Mostly uncharacterized, incl. L,D-transpeptidase catalytic domain, and ABC-2 family transporter protein


id: CL:3050
description: Mostly uncharacterized, incl. ABC-2 family transporter protein, and Mannosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3050_Mostly_uncharacterized,_incl._ABC-2_family_transporter_protein,_and_Mannosylation


id: CL:3051
description: Mixed, incl. ABC-2 family transporter protein, and Mannosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3051_Mixed,_incl._ABC-2_family_transporter_protein,_and_Mannosylation


id: CL:3053
description: ABC-2 family transporter protein, and Helix_turn_helix, Lux Regulon
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3053_ABC-2_family_transporter_protein,_and_Helix_turn_helix,_Lux_Regulon


id: CL:3073
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3073_Mixed,_incl._Glycoside_hydrolase,_family_25_subgroup,_and_Positive_regulation_of_RNA_biosynthetic_process

description:
  Mixed, incl. Glycoside hydrolase, family 25 subgroup, and Positive regulation of RNA biosynthetic process


id: CL:3092
description: Mixed, incl. Glycerophospholipid metabolism, and Aminoacyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3092_Mixed,_incl._Glycerophospholipid_metabolism,_and_Aminoacyltransferase_activity


id: CL:3094
description: Mixed, incl. Aminoacyltransferase activity, and CDP-alcohol phosphatidyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3094_Mixed,_incl._Aminoacyltransferase_activity,_and_CDP-alcohol_phosphatidyltransferase


id: CL:3114
description: Mixed, incl. Peptidase S26B, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3114_Mixed,_incl._Peptidase_S26B,_and_Coiled_coil


id: CL:3116
description: Peptidase S26B, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3116_Peptidase_S26B,_and_Coiled_coil


id: CL:3144
description: Mixed, incl. Fibronectin type III, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3144_Mixed,_incl._Fibronectin_type_III,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:3145
description: Mixed, incl. Fibronectin type III, and Domain of unknown function DUF4430
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3145_Mixed,_incl._Fibronectin_type_III,_and_Domain_of_unknown_function_DUF4430


id: CL:3146
description: Mixed, incl. Fibronectin type III, and Domain of unknown function DUF4430
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3146_Mixed,_incl._Fibronectin_type_III,_and_Domain_of_unknown_function_DUF4430


id: CL:3147
description: Mixed, incl. Fibronectin type III, and Domain of unknown function DUF4430
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3147_Mixed,_incl._Fibronectin_type_III,_and_Domain_of_unknown_function_DUF4430


id: CL:3149
description: Mixed, incl. Domain of unknown function DUF4430, and Transglutaminase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3149_Mixed,_incl._Domain_of_unknown_function_DUF4430,_and_Transglutaminase-like_superfamily


id: CL:3152
description: Mixed, incl. Domain of unknown function DUF4430, and ECF-type riboflavin transporter, S component
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3152_Mixed,_incl._Domain_of_unknown_function_DUF4430,_and_ECF-type_riboflavin_transporter,_S_component


id: CL:3184
description: Glycosyl hydrolases family 25, and Transcription regulator Rrf2
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3184_Glycosyl_hydrolases_family_25,_and_Transcription_regulator_Rrf2


id: CL:3193
description: Mixed, incl. Met-10+ like-protein, and Transglutaminase/protease-like homologues
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3193_Mixed,_incl._Met-10+_like-protein,_and_Transglutaminase/protease-like_homologues


id: CL:320
description: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:320_Aminoacyl-tRNA_synthetase,_class_Ia,_anticodon-binding


id: CL:3203
description: Mixed, incl. Cobalt transport protein, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3203_Mixed,_incl._Cobalt_transport_protein,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:3206
description: Cobalt transport protein, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3206_Cobalt_transport_protein,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:3217
description: Mixed, incl. tRNA pseudouridine synthesis, and Carbohydrate/purine kinase, PfkB, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3217_Mixed,_incl._tRNA_pseudouridine_synthesis,_and_Carbohydrate/purine_kinase,_PfkB,_conserved_site


id: CL:3231
description: Mixed, incl. DNA binding HTH domain, AraC-type, and Galactose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3231_Mixed,_incl._DNA_binding_HTH_domain,_AraC-type,_and_Galactose_metabolism


id: CL:3232
description: Mixed, incl. Galactose metabolism, and Bacterial membrane protein YfhO
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3232_Mixed,_incl._Galactose_metabolism,_and_Bacterial_membrane_protein_YfhO


id: CL:3233
description: Mixed, incl. Galactose metabolism, and Bacterial membrane protein YfhO
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3233_Mixed,_incl._Galactose_metabolism,_and_Bacterial_membrane_protein_YfhO


id: CL:3234
description: Mixed, incl. Galactose metabolism, and Bacterial membrane protein YfhO
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3234_Mixed,_incl._Galactose_metabolism,_and_Bacterial_membrane_protein_YfhO


id: CL:3236
description: Sphingolipid metabolism, and Galactose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3236_Sphingolipid_metabolism,_and_Galactose_metabolic_process


id: CL:3260
description: Mixed, incl. Bacterial membrane protein YfhO, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3260_Mixed,_incl._Bacterial_membrane_protein_YfhO,_and_Glycosyl_transferase_family_2


id: CL:3269
description: Mixed, incl. tRNA (guanine) methyltransferase activity, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3269_Mixed,_incl._tRNA_(guanine)_methyltransferase_activity,_and_Sigma-70,_region_4


id: CL:3278
description: Mixed, incl. CNNM, transmembrane domain, and GtrA-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3278_Mixed,_incl._CNNM,_transmembrane_domain,_and_GtrA-like_protein


id: CL:3287
description: Mixed, incl. DNA binding HTH domain, AraC-type, and Transcription regulator HTH, LysR
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3287_Mixed,_incl._DNA_binding_HTH_domain,_AraC-type,_and_Transcription_regulator_HTH,_LysR


id: CL:3289
description: DNA binding HTH domain, AraC-type, and Transcription regulator HTH, LysR
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3289_DNA_binding_HTH_domain,_AraC-type,_and_Transcription_regulator_HTH,_LysR


id: CL:3291
description: DNA binding HTH domain, AraC-type, and Transcription regulator HTH, LysR
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3291_DNA_binding_HTH_domain,_AraC-type,_and_Transcription_regulator_HTH,_LysR


id: CL:3294
description: DNA binding HTH domain, AraC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3294_DNA_binding_HTH_domain,_AraC-type


id: CL:3315
description: Mixed, incl. Alpha/beta hydrolase fold, and Protein of unknown function DUF1275
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3315_Mixed,_incl._Alpha/beta_hydrolase_fold,_and_Protein_of_unknown_function_DUF1275


id: CL:3329
description: Mixed, incl. Modulation by Mtb of host immune system, and HDIG domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3329_Mixed,_incl._Modulation_by_Mtb_of_host_immune_system,_and_HDIG_domain


id: CL:3343
description: Mostly uncharacterized, incl. Sodium/solute symporter, and Protein of unknown function DUF3789
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3343_Mostly_uncharacterized,_incl._Sodium/solute_symporter,_and_Protein_of_unknown_function_DUF3789


id: CL:3345
description: Mixed, incl. Alpha/Beta hydrolase fold, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3345_Mixed,_incl._Alpha/Beta_hydrolase_fold,_and_DNA_integration


id: CL:3359
description: Mixed, incl. Sodium/solute symporter, and Protein of unknown function DUF3789
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3359_Mixed,_incl._Sodium/solute_symporter,_and_Protein_of_unknown_function_DUF3789


id: CL:3370
description: Mixed, incl. ABC transporter-like, ATP-binding domain, and Signaling
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3370_Mixed,_incl._ABC_transporter-like,_ATP-binding_domain,_and_Signaling


id: CL:3371
description: Mixed, incl. ABC transporter-like, ATP-binding domain, and ABC3 transporter permease protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3371_Mixed,_incl._ABC_transporter-like,_ATP-binding_domain,_and_ABC3_transporter_permease_protein_domain


id: CL:3372
description: Mixed, incl. ABC transporter-like, ATP-binding domain, and ABC3 transporter permease protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3372_Mixed,_incl._ABC_transporter-like,_ATP-binding_domain,_and_ABC3_transporter_permease_protein_domain


id: CL:3373
description: Mixed, incl. ABC transporter-like, ATP-binding domain, and ABC3 transporter permease protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3373_Mixed,_incl._ABC_transporter-like,_ATP-binding_domain,_and_ABC3_transporter_permease_protein_domain


id: CL:3374
description: Mixed, incl. MacB, ATP-binding domain, and ABC3 transporter permease protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3374_Mixed,_incl._MacB,_ATP-binding_domain,_and_ABC3_transporter_permease_protein_domain


id: CL:3375
description: Mixed, incl. MacB, ATP-binding domain, and ABC3 transporter permease protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3375_Mixed,_incl._MacB,_ATP-binding_domain,_and_ABC3_transporter_permease_protein_domain


id: CL:3376
description: Mixed, incl. MacB, ATP-binding domain, and ABC3 transporter permease protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3376_Mixed,_incl._MacB,_ATP-binding_domain,_and_ABC3_transporter_permease_protein_domain


id: CL:3377
description: Mixed, incl. MacB, ATP-binding domain, and ABC3 transporter permease protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3377_Mixed,_incl._MacB,_ATP-binding_domain,_and_ABC3_transporter_permease_protein_domain


id: CL:3379
description: MacB, ATP-binding domain, and Membrane component of ABC transporter, predicted
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3379_MacB,_ATP-binding_domain,_and_Membrane_component_of_ABC_transporter,_predicted


id: CL:3380
description: Membrane component of ABC transporter, predicted, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3380_Membrane_component_of_ABC_transporter,_predicted,_and_MacB,_ATP-binding_domain


id: CL:3382
description: Lipoprotein transport, and FtsX-like permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3382_Lipoprotein_transport,_and_FtsX-like_permease_family


id: CL:3399
description: ABC transporter, lipoprotein release, LolD-like, and HlyD family secretion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3399_ABC_transporter,_lipoprotein_release,_LolD-like,_and_HlyD_family_secretion_protein


id: CL:3415
description: Mixed, incl. Membrane fusion protein, biotin-lipoyl like domain, and Phosphoglycerate mutase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3415_Mixed,_incl._Membrane_fusion_protein,_biotin-lipoyl_like_domain,_and_Phosphoglycerate_mutase_family


id: CL:3428
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3428_Mixed,_incl._Domain_of_unknown_function_DUF4367,_and_ABC_transporter,_lipoprotein_release,_LolD-like

description:
  Mixed, incl. Domain of unknown function DUF4367, and ABC transporter, lipoprotein release, LolD-like


id: CL:344
description: Proton-transporting ATP synthase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:344_Proton-transporting_ATP_synthase_complex


id: CL:3442
description: Mixed, incl. MacB-like periplasmic core domain, and ABC transporter, lipoprotein release, LolD-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3442_Mixed,_incl._MacB-like_periplasmic_core_domain,_and_ABC_transporter,_lipoprotein_release,_LolD-like


id: CL:3456
description: Ami_3, and Lipoprotein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3456_Ami_3,_and_Lipoprotein_transport


id: CL:3465
description: Mixed, incl. Type 1 protein exporter, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3465_Mixed,_incl._Type_1_protein_exporter,_and_Sigma-70,_region_4


id: CL:3467
description: Mixed, incl. Type 1 protein exporter, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3467_Mixed,_incl._Type_1_protein_exporter,_and_Sigma-70,_region_4


id: CL:3468
description: Type 1 protein exporter, and MarR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3468_Type_1_protein_exporter,_and_MarR-type_HTH_domain


id: CL:3479
description: Mixed, incl. Sigma-70, region 4, and Elongation factor
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3479_Mixed,_incl._Sigma-70,_region_4,_and_Elongation_factor


id: CL:348
description: Proton-transporting ATP synthase complex, catalytic core F(1)
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:348_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: CL:3504
description: Mixed, incl. ABC transporter-like, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3504_Mixed,_incl._ABC_transporter-like,_conserved_site


id: CL:3516
description: Mixed, incl. ABC transporter-like, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3516_Mixed,_incl._ABC_transporter-like,_conserved_site


id: CL:3526
description: Mixed, incl. Signaling, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3526_Mixed,_incl._Signaling,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:3527
description: Mixed, incl. Signaling, and Staphylococcal AgrD
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3527_Mixed,_incl._Signaling,_and_Staphylococcal_AgrD


id: CL:3529
description: Signaling, and Staphylococcal AgrD
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3529_Signaling,_and_Staphylococcal_AgrD


id: CL:3531
description: Mixed, incl. Sensor histidine kinase NatK, C-terminal domain, and LytTR DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3531_Mixed,_incl._Sensor_histidine_kinase_NatK,_C-terminal_domain,_and_LytTR_DNA-binding_domain


id: CL:3533
description: Sensor histidine kinase NatK, C-terminal domain, and LytTR DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3533_Sensor_histidine_kinase_NatK,_C-terminal_domain,_and_LytTR_DNA-binding_domain


id: CL:3534
description: Sensor histidine kinase NatK, C-terminal domain, and LytTR DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3534_Sensor_histidine_kinase_NatK,_C-terminal_domain,_and_LytTR_DNA-binding_domain


id: CL:3536
description: Quorum sensing, and Sensor histidine kinase NatK, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3536_Quorum_sensing,_and_Sensor_histidine_kinase_NatK,_C-terminal_domain


id: CL:3552
description: LytTR DNA-binding domain, and Sensor histidine kinase NatK, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3552_LytTR_DNA-binding_domain,_and_Sensor_histidine_kinase_NatK,_C-terminal_domain


id: CL:3561
description: Mixed, incl. Quorum sensing, and Transcriptional regulatory protein LytR-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3561_Mixed,_incl._Quorum_sensing,_and_Transcriptional_regulatory_protein_LytR-like


id: CL:3571
description: Mixed, incl. Carbohydrate transport, and ABC transporter-like, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3571_Mixed,_incl._Carbohydrate_transport,_and_ABC_transporter-like,_conserved_site


id: CL:3597
description: Sulfatase, N-terminal, and NUDIX hydrolase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3597_Sulfatase,_N-terminal,_and_NUDIX_hydrolase,_conserved_site


id: CL:3608
description: Mixed, incl. Helix-turn-helix XRE-family like proteins, and Core-binding (CB) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3608_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Core-binding_(CB)_domain


id: CL:3611
description: Mixed, incl. Terminase small subunit, and Primosome complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3611_Mixed,_incl._Terminase_small_subunit,_and_Primosome_complex


id: CL:3635
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3635_Mostly_uncharacterized,_incl._Calcineurin-like_phosphoesterase_domain,_ApaH_type,_and_NodB_homology_domain

description:
  Mostly uncharacterized, incl. Calcineurin-like phosphoesterase domain, ApaH type, and NodB homology domain


id: CL:3636
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3636_Mostly_uncharacterized,_incl._NodB_homology_domain,_and_Calcineurin-like_phosphoesterase_domain,_ApaH_type

description:
  Mostly uncharacterized, incl. NodB homology domain, and Calcineurin-like phosphoesterase domain, ApaH type


id: CL:3637
description: Mixed, incl. Calcineurin-like phosphoesterase domain, ApaH type, and ROK family
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3637_Mixed,_incl._Calcineurin-like_phosphoesterase_domain,_ApaH_type,_and_ROK_family


id: CL:3638
description: Mixed, incl. ROK family, and Protein of unknown function DUF4358
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3638_Mixed,_incl._ROK_family,_and_Protein_of_unknown_function_DUF4358


id: CL:364
description: Proton-transporting ATP synthase complex, catalytic core F(1)
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:364_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: CL:3641
description: Mixed, incl. ROK family, and RmlC-like cupin domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3641_Mixed,_incl._ROK_family,_and_RmlC-like_cupin_domain_superfamily


id: CL:3657
description: Calcineurin-like phosphoesterase domain, ApaH type, and RNA capping
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3657_Calcineurin-like_phosphoesterase_domain,_ApaH_type,_and_RNA_capping


id: CL:3667
description: Mixed, incl. Outer membrane, and NodB homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3667_Mixed,_incl._Outer_membrane,_and_NodB_homology_domain


id: CL:3681
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3681_Mixed,_incl._Acyl_transferase/acyl_hydrolase/lysophospholipase,_and_Calcineurin-like_phosphoesterase_superfamily_domain

description:
  Mixed, incl. Acyl transferase/acyl hydrolase/lysophospholipase, and Calcineurin-like phosphoesterase superfamily domain


id: CL:3690
description: Mixed, incl. Ion transport, and Winged helix DNA-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3690_Mixed,_incl._Ion_transport,_and_Winged_helix_DNA-binding_domain_superfamily


id: CL:3692
description: Mixed, incl. Metal ion transport, and DTXR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3692_Mixed,_incl._Metal_ion_transport,_and_DTXR-type_HTH_domain


id: CL:3693
description: Mixed, incl. Cation homeostasis, and P-type ATPase, subfamily IB
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3693_Mixed,_incl._Cation_homeostasis,_and_P-type_ATPase,_subfamily_IB


id: CL:3695
description: Mixed, incl. P-type ATPase, subfamily IB, and Transition metal ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3695_Mixed,_incl._P-type_ATPase,_subfamily_IB,_and_Transition_metal_ion_transport


id: CL:3698
description: Heavy-metal-associated domain, and ArsR-like helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3698_Heavy-metal-associated_domain,_and_ArsR-like_helix-turn-helix_domain


id: CL:3725
description: Mixed, incl. Cation homeostasis, and The GLUG motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3725_Mixed,_incl._Cation_homeostasis,_and_The_GLUG_motif


id: CL:3727
description: Mixed, incl. Ferrous iron transporter FeoA domain, and Iron ion homeostasis
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3727_Mixed,_incl._Ferrous_iron_transporter_FeoA_domain,_and_Iron_ion_homeostasis


id: CL:3753
description: Potassium ion transport, and AI-2E family transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3753_Potassium_ion_transport,_and_AI-2E_family_transporter


id: CL:3781
description: Mixed, incl. CAAX-box protein processing, and Amidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3781_Mixed,_incl._CAAX-box_protein_processing,_and_Amidase_activity


id: CL:379
description: ATPase-coupled ion transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:379_ATPase-coupled_ion_transmembrane_transporter_activity


id: CL:3800
description: Mixed, incl. Magnesium ion transport, and Queuosine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3800_Mixed,_incl._Magnesium_ion_transport,_and_Queuosine_biosynthesis


id: CL:3801
description: Mixed, incl. Magnesium ion transport, and Queuosine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3801_Mixed,_incl._Magnesium_ion_transport,_and_Queuosine_biosynthesis


id: CL:3814
description: AI-2E family transporter, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3814_AI-2E_family_transporter,_and_Signal


id: CL:3826
description: Mixed, incl. Pfam phage integrase family, and SinI-like, DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3826_Mixed,_incl._Pfam_phage_integrase_family,_and_SinI-like,_DNA-binding_domain


id: CL:3828
description: Core-binding (CB) domain, and Transcription regulator LuxR, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3828_Core-binding_(CB)_domain,_and_Transcription_regulator_LuxR,_C-terminal


id: CL:3840
description: Mixed, incl. Domain of unknown function DUF6291, and SinI-like, DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3840_Mixed,_incl._Domain_of_unknown_function_DUF6291,_and_SinI-like,_DNA-binding_domain


id: CL:3851
description: Mostly uncharacterized, incl. Dynamin family, and Protein kinase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3851_Mostly_uncharacterized,_incl._Dynamin_family,_and_Protein_kinase_domain


id: CL:3852
description: Mostly uncharacterized, incl. Calcineurin-like phosphoesterase, and WYL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3852_Mostly_uncharacterized,_incl._Calcineurin-like_phosphoesterase,_and_WYL_domain


id: CL:3853
description: Mostly uncharacterized, incl. Calcineurin-like phosphoesterase, and Zinc finger, SWIM-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3853_Mostly_uncharacterized,_incl._Calcineurin-like_phosphoesterase,_and_Zinc_finger,_SWIM-type


id: CL:3854
description: Mixed, incl. Calcineurin-like phosphoesterase, and Zinc finger, SWIM-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3854_Mixed,_incl._Calcineurin-like_phosphoesterase,_and_Zinc_finger,_SWIM-type


id: CL:3856
description: Mixed, incl. DNA/RNA polymerase superfamily, and Calcineurin-like phosphoesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3856_Mixed,_incl._DNA/RNA_polymerase_superfamily,_and_Calcineurin-like_phosphoesterase


id: CL:3872
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3872_Mixed,_incl._Regulatory_factor,_effector_binding_domain_superfamily,_and_Calcineurin-like_phosphoesterase

description:
  Mixed, incl. Regulatory factor, effector binding domain superfamily, and Calcineurin-like phosphoesterase


id: CL:3881
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3881_Mostly_uncharacterized,_incl._Arc-like_DNA_binding_domain,_and_Helix_turn_helix_multiple_antibiotic_resistance_protein

description:
  Mostly uncharacterized, incl. Arc-like DNA binding domain, and Helix_turn_helix multiple antibiotic resistance protein


id: CL:3882
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3882_Mixed,_incl._Arc-like_DNA_binding_domain,_and_Helix_turn_helix_multiple_antibiotic_resistance_protein

description:
  Mixed, incl. Arc-like DNA binding domain, and Helix_turn_helix multiple antibiotic resistance protein


id: CL:3893
description: Mixed, incl. Von Willebrand factor A-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3893_Mixed,_incl._Von_Willebrand_factor_A-like_domain_superfamily


id: CL:3903
description: Mixed, incl. Protein phosphopantetheinylation, and Serine/threonine-protein kinase, active site
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3903_Mixed,_incl._Protein_phosphopantetheinylation,_and_Serine/threonine-protein_kinase,_active_site


id: CL:3919
description: Mixed, incl. Dynamin family, and Zinc-ribbon domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3919_Mixed,_incl._Dynamin_family,_and_Zinc-ribbon_domain


id: CL:392
description: Mixed, incl. Protein folding, and Peptidyl-proline modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:392_Mixed,_incl._Protein_folding,_and_Peptidyl-proline_modification


id: CL:3920
description: Mixed, incl. Dynamin family, and Zinc-ribbon domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3920_Mixed,_incl._Dynamin_family,_and_Zinc-ribbon_domain


id: CL:3923
description: Mixed, incl. Zinc-ribbon domain, and Double zinc ribbon
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3923_Mixed,_incl._Zinc-ribbon_domain,_and_Double_zinc_ribbon


id: CL:393
description: Mixed, incl. Protein folding, and Peptidyl-proline modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:393_Mixed,_incl._Protein_folding,_and_Peptidyl-proline_modification


id: CL:3936
description: Mixed, incl. Dynamin family, and Ascorbate and aldarate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3936_Mixed,_incl._Dynamin_family,_and_Ascorbate_and_aldarate_metabolism


id: CL:394
description: Mixed, incl. Peptidyl-proline modification, and Unfolded protein binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:394_Mixed,_incl._Peptidyl-proline_modification,_and_Unfolded_protein_binding


id: CL:3947
description: Mixed, incl. Pentapeptide repeat, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3947_Mixed,_incl._Pentapeptide_repeat,_and_ABC_transporter,_permease


id: CL:395
description: Mixed, incl. Unfolded protein binding, and PP-loop family
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:395_Mixed,_incl._Unfolded_protein_binding,_and_PP-loop_family


id: CL:3956
description: Mixed, incl. ABC transporters, and Arginine and proline metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3956_Mixed,_incl._ABC_transporters,_and_Arginine_and_proline_metabolism


id: CL:3957
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3957_Mixed,_incl._Binding-protein-dependent_transport_system_inner_membrane_component,_and_Arginine_and_proline_metabolism

description:
  Mixed, incl. Binding-protein-dependent transport system inner membrane component, and Arginine and proline metabolism


id: CL:3958
description: Mixed, incl. Amino acid transport, and Quorum sensing
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3958_Mixed,_incl._Amino_acid_transport,_and_Quorum_sensing


id: CL:3960
description: Mixed, incl. Amino acid transport, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3960_Mixed,_incl._Amino_acid_transport,_and_Peptide_transport


id: CL:3962
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3962_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Solute-binding_protein_family_3/N-terminal_domain_of_MltF

description:
  Amino acid ABC transporter, permease protein, 3-TM domain, and Solute-binding protein family 3/N-terminal domain of MltF


id: CL:397
description: Unfolded protein binding, and Peptidyl-proline modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:397_Unfolded_protein_binding,_and_Peptidyl-proline_modification


id: CL:3982
description: Peptide transport, and Nickel cation transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:3982_Peptide_transport,_and_Nickel_cation_transmembrane_transporter_activity


id: CL:4001
description: Mixed, incl. Aminoacyltransferase activity, and Regulation of response to stimulus
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4001_Mixed,_incl._Aminoacyltransferase_activity,_and_Regulation_of_response_to_stimulus


id: CL:4017
description: Mixed, incl. Arginine and proline metabolism, and Polyamine transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4017_Mixed,_incl._Arginine_and_proline_metabolism,_and_Polyamine_transport


id: CL:4019
description: Arginine and proline metabolism, and Lysine degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4019_Arginine_and_proline_metabolism,_and_Lysine_degradation


id: CL:4021
description: Ureohydrolase, and Orn/Lys/Arg decarboxylase, major domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4021_Ureohydrolase,_and_Orn/Lys/Arg_decarboxylase,_major_domain


id: CL:4034
description: Mixed, incl. Polyamine metabolic process, and Non-membrane-bounded organelle
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4034_Mixed,_incl._Polyamine_metabolic_process,_and_Non-membrane-bounded_organelle


id: CL:4047
description: Mixed, incl. Polyamine transport, and Metallopeptidase family M81
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4047_Mixed,_incl._Polyamine_transport,_and_Metallopeptidase_family_M81


id: CL:4050
description: Polyamine transport, and ABC-type polyamine transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4050_Polyamine_transport,_and_ABC-type_polyamine_transporter_activity


id: CL:407
description: PP-loop family, and AMP-binding enzyme C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:407_PP-loop_family,_and_AMP-binding_enzyme_C-terminal_domain


id: CL:4070
description: Mixed, incl. Nickel cation binding, and Branched-chain amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4070_Mixed,_incl._Nickel_cation_binding,_and_Branched-chain_amino_acid_transport


id: CL:4087
description: Branched-chain amino acid transport, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4087_Branched-chain_amino_acid_transport,_and_ABC_transporter,_permease


id: CL:4097
description: Mostly uncharacterized, incl. Thioredoxin, and FMN-binding split barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4097_Mostly_uncharacterized,_incl._Thioredoxin,_and_FMN-binding_split_barrel


id: CL:4098
description: Mixed, incl. Thioredoxin, and FMN-binding split barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4098_Mixed,_incl._Thioredoxin,_and_FMN-binding_split_barrel


id: CL:4109
description: Mixed, incl. Cell wall/choline-binding repeat, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4109_Mixed,_incl._Cell_wall/choline-binding_repeat,_and_Signal


id: CL:4118
description: Mixed, incl. Heme, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4118_Mixed,_incl._Heme,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:4133
description: Mixed, incl. Xenobiotic transport, and Amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4133_Mixed,_incl._Xenobiotic_transport,_and_Amino_acid_transport


id: CL:4134
description: Mixed, incl. Xenobiotic transport, and Amino acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4134_Mixed,_incl._Xenobiotic_transport,_and_Amino_acid_transport


id: CL:4135
description: Xenobiotic transport, and PD-(D/E)XK nuclease superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4135_Xenobiotic_transport,_and_PD-(D/E)XK_nuclease_superfamily


id: CL:4151
description: Mixed, incl. Alanine transport, and Xenobiotic transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4151_Mixed,_incl._Alanine_transport,_and_Xenobiotic_transport


id: CL:416
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:416_Mixed,_incl._Pseudouridine_synthase,_RluA-like,_conserved_site,_and_Circularly_permuted_(CP)-type_guanine_nucleotide-binding_(G)_domain

description:
  Mixed, incl. Pseudouridine synthase, RluA-like, conserved site, and Circularly permuted (CP)-type guanine nucleotide-binding (G) domain


id: CL:4164
description: Mixed, incl. AzlC protein, and Branched-chain amino acid transport, AzlD
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4164_Mixed,_incl._AzlC_protein,_and_Branched-chain_amino_acid_transport,_AzlD


id: CL:4165
description: Mixed, incl. AzlC protein, and CYTH-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4165_Mixed,_incl._AzlC_protein,_and_CYTH-like_domain_superfamily


id: CL:4174
description: Mixed, incl. AzlC protein, and Branched-chain amino acid transport, AzlD
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4174_Mixed,_incl._AzlC_protein,_and_Branched-chain_amino_acid_transport,_AzlD


id: CL:4183
description: Mixed, incl. 5-3 DNA helicase activity, and Zinc-ribbon domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4183_Mixed,_incl._5-3_DNA_helicase_activity,_and_Zinc-ribbon_domain


id: CL:4200
description: Mostly uncharacterized, incl. Cellular modified amino acid catabolic process, and DNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4200_Mostly_uncharacterized,_incl._Cellular_modified_amino_acid_catabolic_process,_and_DNA_modification


id: CL:4201
description: Mostly uncharacterized, incl. Cellular modified amino acid catabolic process, and DNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4201_Mostly_uncharacterized,_incl._Cellular_modified_amino_acid_catabolic_process,_and_DNA_modification


id: CL:4202
description: Mixed, incl. Cellular modified amino acid catabolic process, and DNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4202_Mixed,_incl._Cellular_modified_amino_acid_catabolic_process,_and_DNA_modification


id: CL:4203
description: Mixed, incl. Cellular modified amino acid catabolic process, and Deubiquitinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4203_Mixed,_incl._Cellular_modified_amino_acid_catabolic_process,_and_Deubiquitinase_activity


id: CL:4205
description: Mixed, incl. Cellular modified amino acid catabolic process, and Deubiquitinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4205_Mixed,_incl._Cellular_modified_amino_acid_catabolic_process,_and_Deubiquitinase_activity


id: CL:4207
description: Mixed, incl. Deubiquitinase activity, and Cellular modified amino acid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4207_Mixed,_incl._Deubiquitinase_activity,_and_Cellular_modified_amino_acid_catabolic_process


id: CL:4209
description: Mixed, incl. Cellular modified amino acid catabolic process, and Sulfate reduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4209_Mixed,_incl._Cellular_modified_amino_acid_catabolic_process,_and_Sulfate_reduction


id: CL:4210
description: Mixed, incl. Protein of unknown function DUF3852, and Protein of unknown function DUF6045
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4210_Mixed,_incl._Protein_of_unknown_function_DUF3852,_and_Protein_of_unknown_function_DUF6045


id: CL:4212
description: Mixed, incl. Protein of unknown function DUF6045, and Helicase HerA, central domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4212_Mixed,_incl._Protein_of_unknown_function_DUF6045,_and_Helicase_HerA,_central_domain


id: CL:4229
description: Mixed, incl. Helix-turn-helix domain, and Protein of unknown function DUF3852
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4229_Mixed,_incl._Helix-turn-helix_domain,_and_Protein_of_unknown_function_DUF3852


id: CL:4244
description: Sulfate reduction, and Cellular modified amino acid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4244_Sulfate_reduction,_and_Cellular_modified_amino_acid_catabolic_process


id: CL:426
description: Protein folding, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:426_Protein_folding,_and_ATP-dependent_peptidase_activity


id: CL:4267
description: Mixed, incl. Deubiquitinase activity, and mRNA interferase PemK-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4267_Mixed,_incl._Deubiquitinase_activity,_and_mRNA_interferase_PemK-like


id: CL:428
description: Protein refolding, and GroES-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:428_Protein_refolding,_and_GroES-like_superfamily


id: CL:4283
description: Mixed, incl. Cellular modified amino acid catabolic process, and DNA-methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4283_Mixed,_incl._Cellular_modified_amino_acid_catabolic_process,_and_DNA-methyltransferase_activity


id: CL:4285
description: Mixed, incl. Antirepressor protein, C-terminal, and Cellular modified amino acid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4285_Mixed,_incl._Antirepressor_protein,_C-terminal,_and_Cellular_modified_amino_acid_catabolic_process


id: CL:4309
description: Mixed, incl. Cellular modified amino acid catabolic process, and DNA-methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4309_Mixed,_incl._Cellular_modified_amino_acid_catabolic_process,_and_DNA-methyltransferase_activity


id: CL:4311
description: Mixed, incl. Antirepressor protein, C-terminal, and C-5 cytosine methyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4311_Mixed,_incl._Antirepressor_protein,_C-terminal,_and_C-5_cytosine_methyltransferase


id: CL:4323
description: Mixed, incl. Protein of unknown function DUF3846, and SpoVG
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4323_Mixed,_incl._Protein_of_unknown_function_DUF3846,_and_SpoVG


id: CL:4334
description: Mixed, incl. DNA modification, and Protein of unknown function DUF3846
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4334_Mixed,_incl._DNA_modification,_and_Protein_of_unknown_function_DUF3846


id: CL:4336
description: Mixed, incl. Protein of unknown function DUF3846, and Sortase B family
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4336_Mixed,_incl._Protein_of_unknown_function_DUF3846,_and_Sortase_B_family


id: CL:4361
description: Mostly uncharacterized, incl. Toxin-antitoxin complex, and MobL relaxases
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4361_Mostly_uncharacterized,_incl._Toxin-antitoxin_complex,_and_MobL_relaxases


id: CL:4362
description: Mostly uncharacterized, incl. Toxin-antitoxin complex, and MobL relaxases
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4362_Mostly_uncharacterized,_incl._Toxin-antitoxin_complex,_and_MobL_relaxases


id: CL:4363
description: Mixed, incl. MobL relaxases, and TraG, P-loop domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4363_Mixed,_incl._MobL_relaxases,_and_TraG,_P-loop_domain


id: CL:4364
description: Mixed, incl. MobL relaxases, and TraG, P-loop domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4364_Mixed,_incl._MobL_relaxases,_and_TraG,_P-loop_domain


id: CL:4365
description: Mixed, incl. Helix-turn-helix domain, and Single-strand binding protein family
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4365_Mixed,_incl._Helix-turn-helix_domain,_and_Single-strand_binding_protein_family


id: CL:4378
description: TraG, P-loop domain, and Type IV secretion system protein TraG/VirD4
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4378_TraG,_P-loop_domain,_and_Type_IV_secretion_system_protein_TraG/VirD4


id: CL:4389
description: Mixed, incl. Phage MuF, C-terminal domain, and DNA Primase, CHC2-type zinc finger
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4389_Mixed,_incl._Phage_MuF,_C-terminal_domain,_and_DNA_Primase,_CHC2-type_zinc_finger


id: CL:4403
description: Toxin-antitoxin complex, and Fido domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4403_Toxin-antitoxin_complex,_and_Fido_domain


id: CL:4415
description: Mixed, incl. Nucleotidyltransferase domain, and Toxin-antitoxin complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4415_Mixed,_incl._Nucleotidyltransferase_domain,_and_Toxin-antitoxin_complex


id: CL:4425
description: Mixed, incl. mRNA interferase PemK-like, and Protein of unknown function DUF3789
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4425_Mixed,_incl._mRNA_interferase_PemK-like,_and_Protein_of_unknown_function_DUF3789


id: CL:4440
description: Mostly uncharacterized, incl. DNA strand exchange activity, and Cysteine-type peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4440_Mostly_uncharacterized,_incl._DNA_strand_exchange_activity,_and_Cysteine-type_peptidase_activity


id: CL:4441
description: Mostly uncharacterized, incl. DNA strand exchange activity, and Cysteine-type peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4441_Mostly_uncharacterized,_incl._DNA_strand_exchange_activity,_and_Cysteine-type_peptidase_activity


id: CL:4443
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4443_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF6075,_and_Exonuclease,_RNase_T/DNA_polymerase_III

description:
  Mostly uncharacterized, incl. Protein of unknown function DUF6075, and Exonuclease, RNase T/DNA polymerase III


id: CL:4444
description: Mostly uncharacterized, incl. Protein of unknown function DUF6075, and Prealbumin-like fold domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4444_Mostly_uncharacterized,_incl._Protein_of_unknown_function_DUF6075,_and_Prealbumin-like_fold_domain


id: CL:4445
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4445_Mostly_uncharacterized,_incl._Single-stranded_DNA_binding,_and_Intracellular_protein-containing_complex

description:
  Mostly uncharacterized, incl. Single-stranded DNA binding, and Intracellular protein-containing complex


id: CL:4448
description: Mostly uncharacterized, incl. Single-stranded DNA binding, and Toprim-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4448_Mostly_uncharacterized,_incl._Single-stranded_DNA_binding,_and_Toprim-like


id: CL:4450
description: Mostly uncharacterized, incl. Toprim-like, and Exodeoxyribonuclease V complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4450_Mostly_uncharacterized,_incl._Toprim-like,_and_Exodeoxyribonuclease_V_complex


id: CL:4454
description: Mixed, incl. Exodeoxyribonuclease V complex, and Single-stranded DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4454_Mixed,_incl._Exodeoxyribonuclease_V_complex,_and_Single-stranded_DNA_binding


id: CL:4466
description: Mixed, incl. Sortase B family, and Helicase HerA, central domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4466_Mixed,_incl._Sortase_B_family,_and_Helicase_HerA,_central_domain


id: CL:448
description: Mixed, incl. TPR repeat, and Transmembrane protein TMEM64
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:448_Mixed,_incl._TPR_repeat,_and_Transmembrane_protein_TMEM64


id: CL:4499
description: Mixed, incl. Protein of unknown function DUF6075, and N-acetyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4499_Mixed,_incl._Protein_of_unknown_function_DUF6075,_and_N-acetyltransferase_activity


id: CL:4511
description: Exonuclease, RNase T/DNA polymerase III, and Protein of unknown function DUF6075
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4511_Exonuclease,_RNase_T/DNA_polymerase_III,_and_Protein_of_unknown_function_DUF6075


id: CL:4527
description: Mixed, incl. Resolvase, N terminal domain, and Endonuclease relaxase, MobA/VirD2
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4527_Mixed,_incl._Resolvase,_N_terminal_domain,_and_Endonuclease_relaxase,_MobA/VirD2


id: CL:4529
description: Mixed, incl. Resolvase, N terminal domain, and Endonuclease relaxase, MobA/VirD2
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4529_Mixed,_incl._Resolvase,_N_terminal_domain,_and_Endonuclease_relaxase,_MobA/VirD2


id: CL:4532
description: DNA strand exchange activity, and Endonuclease relaxase, MobA/VirD2
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4532_DNA_strand_exchange_activity,_and_Endonuclease_relaxase,_MobA/VirD2


id: CL:4566
description: Mostly uncharacterized, incl. Toprim-like, and Phage MuF, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4566_Mostly_uncharacterized,_incl._Toprim-like,_and_Phage_MuF,_C-terminal_domain


id: CL:4568
description: Mixed, incl. Toprim-like, and Phage MuF, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4568_Mixed,_incl._Toprim-like,_and_Phage_MuF,_C-terminal_domain


id: CL:460
description: Mixed, incl. Protein phosphatase 2C family, and Thiamine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:460_Mixed,_incl._Protein_phosphatase_2C_family,_and_Thiamine_metabolism


id: CL:4603
description: Mixed, incl. Transposition, and DNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4603_Mixed,_incl._Transposition,_and_DNA_modification


id: CL:4604
description: Mixed, incl. Transposition, and Flavoprotein-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4604_Mixed,_incl._Transposition,_and_Flavoprotein-like_superfamily


id: CL:4606
description: Mixed, incl. Transposition, and Response to pH
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4606_Mixed,_incl._Transposition,_and_Response_to_pH


id: CL:4609
description: Transposition, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4609_Transposition,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:462
description: Mixed, incl. Thiamine metabolism, and rRNA methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:462_Mixed,_incl._Thiamine_metabolism,_and_rRNA_methyltransferase_activity


id: CL:4636
description: Flavoprotein-like superfamily, and Rubrerythrin
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4636_Flavoprotein-like_superfamily,_and_Rubrerythrin


id: CL:464
description: rRNA methyltransferase activity, and Formyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:464_rRNA_methyltransferase_activity,_and_Formyl_transferase


id: CL:4646
description: Mixed, incl. DNA methylase, adenine-specific, and Putative cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4646_Mixed,_incl._DNA_methylase,_adenine-specific,_and_Putative_cyclase


id: CL:4648
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4648_Mixed,_incl._Methyltransferase_small_domain,_and_Type_I_restriction_modification_DNA_specificity_domain

description:
  Mixed, incl. Methyltransferase small domain, and Type I restriction modification DNA specificity domain


id: CL:4677
description: Mostly uncharacterized, incl. Viral process, and Transposition
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4677_Mostly_uncharacterized,_incl._Viral_process,_and_Transposition


id: CL:4678
description: Mostly uncharacterized, incl. Transposition, and Viral process
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4678_Mostly_uncharacterized,_incl._Transposition,_and_Viral_process


id: CL:4679
description: Mostly uncharacterized, incl. Transposition, and NusG-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4679_Mostly_uncharacterized,_incl._Transposition,_and_NusG-like,_N-terminal


id: CL:4681
description: Mixed, incl. Transposition, and Extracellular region
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4681_Mixed,_incl._Transposition,_and_Extracellular_region


id: CL:4698
description: Mixed, incl. SpoVT / AbrB like domain, and Integrase, catalytic core
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4698_Mixed,_incl._SpoVT_/_AbrB_like_domain,_and_Integrase,_catalytic_core


id: CL:4712
description: Mixed, incl. Viral process, and Proteolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4712_Mixed,_incl._Viral_process,_and_Proteolysis


id: CL:4733
description: Mixed, incl. Viral process, and PGBD superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4733_Mixed,_incl._Viral_process,_and_PGBD_superfamily


id: CL:4735
description: Mixed, incl. Viral process, and Metallopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4735_Mixed,_incl._Viral_process,_and_Metallopeptidase_activity


id: CL:4761
description: Mostly uncharacterized, incl. ParB/Sulfiredoxin, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4761_Mostly_uncharacterized,_incl._ParB/Sulfiredoxin,_and_AAA_domain


id: CL:4762
description: Mostly uncharacterized, incl. Domain of unknown function DUF6273, and Lysozyme activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4762_Mostly_uncharacterized,_incl._Domain_of_unknown_function_DUF6273,_and_Lysozyme_activity


id: CL:4763
description: Mostly uncharacterized, incl. Pectin lyase fold, and Host cell cytoplasm
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4763_Mostly_uncharacterized,_incl._Pectin_lyase_fold,_and_Host_cell_cytoplasm


id: CL:4764
description: Mostly uncharacterized, incl. Pectin lyase fold, and Host cell cytoplasm
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4764_Mostly_uncharacterized,_incl._Pectin_lyase_fold,_and_Host_cell_cytoplasm


id: CL:4768
description: Mixed, incl. Host cell cytoplasm, and Protease
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4768_Mixed,_incl._Host_cell_cytoplasm,_and_Protease


id: CL:4782
description: Mixed, incl. Domain of unknown function DUF6273
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4782_Mixed,_incl._Domain_of_unknown_function_DUF6273


id: CL:4791
description: Mostly uncharacterized, incl. Sporulation initiation factor Spo0A C terminal, and ParB/Sulfiredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4791_Mostly_uncharacterized,_incl._Sporulation_initiation_factor_Spo0A_C_terminal,_and_ParB/Sulfiredoxin


id: CL:4792
description: Mostly uncharacterized, incl. ParB/Sulfiredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4792_Mostly_uncharacterized,_incl._ParB/Sulfiredoxin


id: CL:4803
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4803_Mixed,_incl._Sporulation_initiation_factor_Spo0A_C_terminal,_and_Helix-turn-helix_XRE-family_like_proteins

description:
  Mixed, incl. Sporulation initiation factor Spo0A C terminal, and Helix-turn-helix XRE-family like proteins


id: CL:4812
description: Mostly uncharacterized, incl. Lysozyme activity, and Reverse transcriptase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4812_Mostly_uncharacterized,_incl._Lysozyme_activity,_and_Reverse_transcriptase_domain


id: CL:4813
description: Mostly uncharacterized, incl. Domain of unknown function DUF6273, and Cytolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4813_Mostly_uncharacterized,_incl._Domain_of_unknown_function_DUF6273,_and_Cytolysis


id: CL:4816
description: Mixed, incl. Cytolysis, and Metallopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4816_Mixed,_incl._Cytolysis,_and_Metallopeptidase_activity


id: CL:4834
description: Mixed, incl. LysM domain, and Reverse transcriptase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4834_Mixed,_incl._LysM_domain,_and_Reverse_transcriptase_domain


id: CL:4845
description: Mixed, incl. ParB/Sulfiredoxin, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4845_Mixed,_incl._ParB/Sulfiredoxin,_and_AAA_domain


id: CL:4847
description: ParB/Spo0J, HTH domain, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4847_ParB/Spo0J,_HTH_domain,_and_AAA_domain


id: CL:4863
description: Mixed, incl. Protein of unknown function (DUF3849), and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4863_Mixed,_incl._Protein_of_unknown_function_(DUF3849),_and_AAA_domain


id: CL:4882
description: Maintenance of DNA repeat elements, and Antiviral defense
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4882_Maintenance_of_DNA_repeat_elements,_and_Antiviral_defense


id: CL:4899
description: Mixed, incl. Terminase small subunit, and EF-Hand 1, calcium-binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4899_Mixed,_incl._Terminase_small_subunit,_and_EF-Hand_1,_calcium-binding_site


id: CL:4911
description: Mixed, incl. DNA integration, and LexA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4911_Mixed,_incl._DNA_integration,_and_LexA-like


id: CL:4916
description: Mixed, incl. LexA-like, and DDE transposase retroviral integrase sub-family
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4916_Mixed,_incl._LexA-like,_and_DDE_transposase_retroviral_integrase_sub-family


id: CL:4936
description: Mixed, incl. ABC transporter, permease, and Sugar transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4936_Mixed,_incl._ABC_transporter,_permease,_and_Sugar_transport


id: CL:4938
description: ABC transporter, permease, and Sugar transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4938_ABC_transporter,_permease,_and_Sugar_transport


id: CL:4975
description: Mixed, incl. FMN-binding split barrel, and Integrase, catalytic core
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:4975_Mixed,_incl._FMN-binding_split_barrel,_and_Integrase,_catalytic_core


id: CL:498
description: Mixed, incl. TRAM domain, and Anaerobic coproporphyrinogen-III oxidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:498_Mixed,_incl._TRAM_domain,_and_Anaerobic_coproporphyrinogen-III_oxidase


id: CL:5062
description: Mixed, incl. Protein of unknown function DUF4869
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:5062_Mixed,_incl._Protein_of_unknown_function_DUF4869


id: CL:509
description: Isoprenoid metabolic process, and Glycerophospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:509_Isoprenoid_metabolic_process,_and_Glycerophospholipid_metabolism


id: CL:511
description: Mixed, incl. De novo CTP biosynthetic process, and Prenyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:511_Mixed,_incl._De_novo_CTP_biosynthetic_process,_and_Prenyltransferase_activity


id: CL:528
description: Isopentenyl diphosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:528_Isopentenyl_diphosphate_metabolic_process


id: CL:543
description: Mixed, incl. Zn-dependent metallo-hydrolase RNA specificity domain, and DHH family
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:543_Mixed,_incl._Zn-dependent_metallo-hydrolase_RNA_specificity_domain,_and_DHH_family


id: CL:566
description: K homology domain-like, alpha/beta, and Aldo/keto reductase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:566_K_homology_domain-like,_alpha/beta,_and_Aldo/keto_reductase_family


id: CL:583
description: Mixed, incl. Catalytic activity, acting on DNA, and Bacterial nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:583_Mixed,_incl._Catalytic_activity,_acting_on_DNA,_and_Bacterial_nucleoid


id: CL:584
description: Mixed, incl. Homologous recombination, and ATP-dependent activity, acting on DNA
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:584_Mixed,_incl._Homologous_recombination,_and_ATP-dependent_activity,_acting_on_DNA


id: CL:587
description: Mismatch repair, and DNA repair complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:587_Mismatch_repair,_and_DNA_repair_complex


id: CL:588
description: Nucleotide excision repair, and Mismatched DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:588_Nucleotide_excision_repair,_and_Mismatched_DNA_binding


id: CL:589
description: Mixed, incl. Mismatched DNA binding, and HRDC domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:589_Mixed,_incl._Mismatched_DNA_binding,_and_HRDC_domain


id: CL:592
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:592_Mixed,_incl._DNA_recombination_and_repair_protein_RecA-like,_ATP-binding_domain,_and_DNA/RNA_polymerase_superfamily

description:
  Mixed, incl. DNA recombination and repair protein RecA-like, ATP-binding domain, and DNA/RNA polymerase superfamily


id: CL:639
description: DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal, and Regulation of DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:639_DNA_helicase_DnaB,_N-terminal/DNA_primase_DnaG,_C-terminal,_and_Regulation_of_DNA_replication


id: CL:649
description: Mixed, incl. DNA topoisomerase, type IIA-like domain superfamily, and RecF/RecN/SMC, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:649_Mixed,_incl._DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_RecF/RecN/SMC,_N-terminal


id: CL:660
description: Mixed, incl. Horizontal gene transfer, and Holliday junction helicase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:660_Mixed,_incl._Horizontal_gene_transfer,_and_Holliday_junction_helicase_complex


id: CL:662
description: Horizontal gene transfer, and tRNA endonuclease-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:662_Horizontal_gene_transfer,_and_tRNA_endonuclease-like_domain_superfamily


id: CL:674
description: Holliday junction helicase complex, and Prenyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:674_Holliday_junction_helicase_complex,_and_Prenyltransferase_activity


id: CL:684
description: Mixed, incl. Domain of unknown function DUF262, and UvrD/REP helicase N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:684_Mixed,_incl._Domain_of_unknown_function_DUF262,_and_UvrD/REP_helicase_N-terminal_domain


id: CL:703
description: Mixed, incl. K Homology domain, type 2, and Bacterial nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:703_Mixed,_incl._K_Homology_domain,_type_2,_and_Bacterial_nucleoid


id: CL:718
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:718_Mixed,_incl._glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_Asparagine_metabolic_process

description:
  Mixed, incl. glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and Asparagine metabolic process


id: CL:719
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and Asparagine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:719_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_Asparagine_metabolic_process


id: CL:722
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:722_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: CL:740
description: Mixed, incl. Type 1 protein exporter, and RF-1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:740_Mixed,_incl._Type_1_protein_exporter,_and_RF-1_domain


id: CL:742
description: Mixed, incl. Telomere recombination, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:742_Mixed,_incl._Telomere_recombination,_and_Coenzyme_A_biosynthesis


id: CL:759
description: Mixed, incl. Endoribonuclease activity, and Fido domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:759_Mixed,_incl._Endoribonuclease_activity,_and_Fido_domain


id: CL:761
description: Mixed, incl. O-Antigen ligase, and Ribonuclease III domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:761_Mixed,_incl._O-Antigen_ligase,_and_Ribonuclease_III_domain


id: CL:776
description: Mixed, incl. Response to tellurium ion, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:776_Mixed,_incl._Response_to_tellurium_ion,_and_Acetyltransferase_(GNAT)_domain


id: CL:786
description: Mixed, incl. Cell cycle, and Cell wall organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:786_Mixed,_incl._Cell_cycle,_and_Cell_wall_organization


id: CL:787
description: Mixed, incl. Cell cycle, and Cell wall organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:787_Mixed,_incl._Cell_cycle,_and_Cell_wall_organization


id: CL:789
description: Mixed, incl. Regulation of cell shape, and Cell cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:789_Mixed,_incl._Regulation_of_cell_shape,_and_Cell_cycle


id: CL:793
description: Cell cycle, and Glycosyl transferase family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:793_Cell_cycle,_and_Glycosyl_transferase_family_4


id: CL:795
description: Cell shape, and Glycosyl transferase family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:795_Cell_shape,_and_Glycosyl_transferase_family_4


id: CL:797
description: Mur ligase, C-terminal, and Glycosyl transferase family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:797_Mur_ligase,_C-terminal,_and_Glycosyl_transferase_family_4


id: CL:845
description: Mixed, incl. Thylakoid, and TRAM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:845_Mixed,_incl._Thylakoid,_and_TRAM_domain


id: CL:848
description: Mixed, incl. Thylakoid, and LSM domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:848_Mixed,_incl._Thylakoid,_and_LSM_domain_superfamily


id: CL:86
description: Mixed, incl. Translation, and Proton transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:86_Mixed,_incl._Translation,_and_Proton_transmembrane_transport


id: CL:87
description: Translation, and Proton transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:87_Translation,_and_Proton_transmembrane_transport


id: CL:872
description: Mixed, incl. Peptidase M42, and Serine/threonine-protein kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:872_Mixed,_incl._Peptidase_M42,_and_Serine/threonine-protein_kinase


id: CL:88
description: Translation, and Bacterial secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:88_Translation,_and_Bacterial_secretion_system


id: CL:89
description: Mixed, incl. Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:89_Mixed,_incl._Ribosome,_and_Regulation_of_translation


id: CL:891
description: Peptidase M23, and PUA-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:891_Peptidase_M23,_and_PUA-like_superfamily


id: CL:90
description: Ribosome, and Bacterial secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:90_Ribosome,_and_Bacterial_secretion_system


id: CL:910
description: Mixed, incl. Ribosomal large subunit binding, and Folate biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:910_Mixed,_incl._Ribosomal_large_subunit_binding,_and_Folate_biosynthesis


id: CL:912
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:912_Mixed,_incl._Polysaccharide_biosynthesis_protein,_and_OBG-type_guanine_nucleotide-binding_(G)_domain

description:
  Mixed, incl. Polysaccharide biosynthesis protein, and OBG-type guanine nucleotide-binding (G) domain


id: CL:92
description: Ribosome, and Bacterial secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:92_Ribosome,_and_Bacterial_secretion_system


id: CL:927
description: Mixed, incl. Folate biosynthesis, and tRNA (adenine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:927_Mixed,_incl._Folate_biosynthesis,_and_tRNA_(adenine)_methyltransferase_activity


id: CL:942
description: Mixed, incl. Nicotinate and nicotinamide metabolism, and Exonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:942_Mixed,_incl._Nicotinate_and_nicotinamide_metabolism,_and_Exonuclease_activity


id: CL:943
description: Mixed, incl. Nicotinate and nicotinamide metabolism, and Exonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:943_Mixed,_incl._Nicotinate_and_nicotinamide_metabolism,_and_Exonuclease_activity


id: CL:944
description: Mostly uncharacterized, incl. Exonuclease, and Ribosome assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:944_Mostly_uncharacterized,_incl._Exonuclease,_and_Ribosome_assembly


id: CL:945
description: Mixed, incl. Exonuclease, and Receptor
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:945_Mixed,_incl._Exonuclease,_and_Receptor


id: CL:946
description: Mixed, incl. Exonuclease, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:946_Mixed,_incl._Exonuclease,_and_AAA_domain


id: CL:95
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:95_Ribosome,_and_Regulation_of_translation


id: CL:950
description: DNA catabolic process, and NusB family
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:950_DNA_catabolic_process,_and_NusB_family


id: CL:970
description: Mixed, incl. Receptor, and Amino-acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:970_Mixed,_incl._Receptor,_and_Amino-acid_transport


id: CL:98
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:98_Ribosome,_and_Regulation_of_translation


id: CL:984
description: Mixed, incl. Ribosome assembly, and NAD biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:984_Mixed,_incl._Ribosome_assembly,_and_NAD_biosynthetic_process


id: CL:986
description: Ribosome assembly, and NAD biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1160721_STRINGid_CL:986_Ribosome_assembly,_and_NAD_biosynthetic_process


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 10
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000724
description: Double-strand break repair via homologous recombination
memo: https://amigo.geneontology.org/amigo/term/GO:0000724
golevel: 9
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0000724_Double-strand_break_repair_via_homologous_recombination


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0002926
description: tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation
memo: https://amigo.geneontology.org/amigo/term/GO:0002926
golevel: 13
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0002926_tRNA_wobble_base_5-methoxycarbonylmethyl-2-thiouridinylation


id: GO:0003871
description: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003871
golevel: 6
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0003871_5-methyltetrahydropteroyltriglutamate-homocysteine_S-methyltransferase_activity


id: GO:0003882
description: CDP-diacylglycerol-serine O-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003882
golevel: 6
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0003882_CDP-diacylglycerol-serine_O-phosphatidyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0003992
description: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003992
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0003992_N2-acetyl-L-ornithine:2-oxoglutarate_5-aminotransferase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
golevel: 6
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004471
description: Malate dehydrogenase (decarboxylating) (NAD+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004471
golevel: 6
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0004471_Malate_dehydrogenase_(decarboxylating)_(NAD+)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 6
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004489
description: Methylenetetrahydrofolate reductase (NAD(P)H) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004489
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0004489_Methylenetetrahydrofolate_reductase_(NAD(P)H)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004648
description: O-phospho-L-serine:2-oxoglutarate aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004648
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0004648_O-phospho-L-serine:2-oxoglutarate_aminotransferase_activity


id: GO:0005315
description: Inorganic phosphate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005315
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0005315_Inorganic_phosphate_transmembrane_transporter_activity


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 11
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0008028
description: Monocarboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008028
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0008028_Monocarboxylic_acid_transmembrane_transporter_activity


id: GO:0008108
description: UDP-glucose:hexose-1-phosphate uridylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008108
golevel: 6
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0008108_UDP-glucose:hexose-1-phosphate_uridylyltransferase_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 7
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
golevel: 6
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0008965
description: Phosphoenolpyruvate-protein phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008965
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0008965_Phosphoenolpyruvate-protein_phosphotransferase_activity


id: GO:0008982
description: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008982
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0008982_protein-N(PI)-phosphohistidine-sugar_phosphotransferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 6
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 9
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 9
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009139
description: Pyrimidine nucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009139
golevel: 9
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0009139_Pyrimidine_nucleoside_diphosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 9
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009157
description: Deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009157
golevel: 9
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0009157_Deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 10
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 9
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 10
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 9
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 10
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 9
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 10
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 10
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 9
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 10
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009210
description: Pyrimidine ribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009210
golevel: 10
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0009210_Pyrimidine_ribonucleoside_triphosphate_catabolic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 9
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 10
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 10
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 9
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 10
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009401
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system
memo: https://amigo.geneontology.org/amigo/term/GO:0009401
golevel: 8
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0009401_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 6
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 6
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 6
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0010604
description: Positive regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010604
golevel: 5
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0010604_Positive_regulation_of_macromolecule_metabolic_process


id: GO:0010605
description: Negative regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010605
golevel: 5
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0010605_Negative_regulation_of_macromolecule_metabolic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
golevel: 3
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015415
description: ATPase-coupled phosphate ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015415
golevel: 7
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0015415_ATPase-coupled_phosphate_ion_transmembrane_transporter_activity


id: GO:0015451
description: Decarboxylation-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015451
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0015451_Decarboxylation-driven_active_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015651
description: Quaternary ammonium group transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015651
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0015651_Quaternary_ammonium_group_transmembrane_transporter_activity


id: GO:0015658
description: Branched-chain amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015658
golevel: 6
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0015658_Branched-chain_amino_acid_transmembrane_transporter_activity


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016625
memo: https://amigo.geneontology.org/amigo/term/GO:0016625
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016625_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_iron-sulfur_protein_as_acceptor

description:
  Oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016641
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016641
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016641_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_oxygen_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016699
description: Oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016699
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016699_Oxidoreductase_activity,_acting_on_hydrogen_as_donor,_iron-sulfur_protein_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016703
memo: https://amigo.geneontology.org/amigo/term/GO:0016703
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016703_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_one_atom_of_oxygen_(internal_monooxygenases_or_internal_mixed_function_oxidases)

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)


id: GO:0016705
memo: https://amigo.geneontology.org/amigo/term/GO:0016705
golevel: 3
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016705_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016730
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016730
golevel: 3
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016730_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: GO:0016732
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors, dinitrogen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016732
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016732_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_dinitrogen_as_acceptor


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016773
description: Phosphotransferase activity, alcohol group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016773
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016773_Phosphotransferase_activity,_alcohol_group_as_acceptor


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
golevel: 6
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016837
description: Carbon-oxygen lyase activity, acting on polysaccharides
memo: https://amigo.geneontology.org/amigo/term/GO:0016837
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016837_Carbon-oxygen_lyase_activity,_acting_on_polysaccharides


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016869
description: Intramolecular transferase activity, transferring amino groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016869
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016869_Intramolecular_transferase_activity,_transferring_amino_groups


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016888
description: Endodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016888
golevel: 7
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016888_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016889
description: Endodeoxyribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016889
golevel: 7
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016889_Endodeoxyribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 7
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
golevel: 6
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016894
memo: https://amigo.geneontology.org/amigo/term/GO:0016894
golevel: 6
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016894_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_3-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 7
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016896
description: Exoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016896
golevel: 7
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016896_Exoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0018339
description: peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid
memo: https://amigo.geneontology.org/amigo/term/GO:0018339
golevel: 8
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0018339_peptidyl-L-beta-methylthioaspartic_acid_biosynthetic_process_from_peptidyl-aspartic_acid


id: GO:0019171
description: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019171
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0019171_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 5
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019279
description: L-methionine biosynthetic process from L-homoserine via cystathionine
memo: https://amigo.geneontology.org/amigo/term/GO:0019279
golevel: 13
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0019279_L-methionine_biosynthetic_process_from_L-homoserine_via_cystathionine


id: GO:0019281
description: L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
memo: https://amigo.geneontology.org/amigo/term/GO:0019281
golevel: 14
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0019281_L-methionine_biosynthetic_process_from_homoserine_via_O-succinyl-L-homoserine_and_cystathionine


id: GO:0019288
description: Isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019288
golevel: 8
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0019288_Isopentenyl_diphosphate_biosynthetic_process,_methylerythritol_4-phosphate_pathway


id: GO:0019556
description: Histidine catabolic process to glutamate and formamide
memo: https://amigo.geneontology.org/amigo/term/GO:0019556
golevel: 10
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0019556_Histidine_catabolic_process_to_glutamate_and_formamide


id: GO:0019829
description: ATPase-coupled cation transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019829
golevel: 6
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0019829_ATPase-coupled_cation_transmembrane_transporter_activity


id: GO:0030435
description: Sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0030435
golevel: 3
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0030435_Sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0030604
description: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030604
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0030604_1-deoxy-D-xylulose-5-phosphate_reductoisomerase_activity


id: GO:0030613
description: Oxidoreductase activity, acting on phosphorus or arsenic in donors
memo: https://amigo.geneontology.org/amigo/term/GO:0030613
golevel: 3
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0030613_Oxidoreductase_activity,_acting_on_phosphorus_or_arsenic_in_donors


id: GO:0030614
description: Oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0030614
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0030614_Oxidoreductase_activity,_acting_on_phosphorus_or_arsenic_in_donors,_disulfide_as_acceptor


id: GO:0030698
description: 5,10-methylenetetrahydrofolate-dependent tRNA (m5U54) methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030698
golevel: 9
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0030698_5,10-methylenetetrahydrofolate-dependent_tRNA_(m5U54)_methyltransferase_activity


id: GO:0031250
description: Anaerobic ribonucleoside-triphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031250
golevel: 4
name:
  GOCC.STRING_v12.0_1160721_STRINGid_GO:0031250_Anaerobic_ribonucleoside-triphosphate_reductase_complex


id: GO:0031554
description: Regulation of DNA-templated transcription, termination
memo: https://amigo.geneontology.org/amigo/term/GO:0031554
golevel: 11
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0031554_Regulation_of_DNA-templated_transcription,_termination


id: GO:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
golevel: 3
name:
  GOCC.STRING_v12.0_1160721_STRINGid_GO:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GO:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
golevel: 3
name:
  GOCC.STRING_v12.0_1160721_STRINGid_GO:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GO:0033362
description: Lysine biosynthetic process via diaminopimelate, diaminopimelate-aminotransferase pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0033362
golevel: 12
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0033362_Lysine_biosynthetic_process_via_diaminopimelate,_diaminopimelate-aminotransferase_pathway


id: GO:0033818
description: Beta-ketoacyl-acyl-carrier-protein synthase III activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033818
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0033818_Beta-ketoacyl-acyl-carrier-protein_synthase_III_activity


id: GO:0034023
description: 5-(carboxyamino)imidazole ribonucleotide mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034023
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0034023_5-(carboxyamino)imidazole_ribonucleotide_mutase_activity


id: GO:0034036
description: Purine ribonucleoside bisphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034036
golevel: 10
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0034036_Purine_ribonucleoside_bisphosphate_biosynthetic_process


id: GO:0034249
description: Negative regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034249
golevel: 6
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0034249_Negative_regulation_of_cellular_amide_metabolic_process


id: GO:0034250
description: Positive regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034250
golevel: 6
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0034250_Positive_regulation_of_cellular_amide_metabolic_process


id: GO:0034404
description: Nucleobase-containing small molecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034404
golevel: 6
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0034404_Nucleobase-containing_small_molecule_biosynthetic_process


id: GO:0034656
description: Nucleobase-containing small molecule catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034656
golevel: 6
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0034656_Nucleobase-containing_small_molecule_catabolic_process


id: GO:0035592
description: Establishment of protein localization to extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0035592
golevel: 6
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0035592_Establishment_of_protein_localization_to_extracellular_region


id: GO:0035598
description: N6-threonylcarbomyladenosine methylthiotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0035598
golevel: 6
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0035598_N6-threonylcarbomyladenosine_methylthiotransferase_activity


id: GO:0036361
description: Racemase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0036361
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0036361_Racemase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0042083
description: 5,10-methylenetetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042083
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0042083_5,10-methylenetetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042084
description: 5-methyltetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042084
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0042084_5-methyltetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042085
description: 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042085
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0042085_5-methyltetrahydropteroyltri-L-glutamate-dependent_methyltransferase_activity


id: GO:0042173
description: Regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042173
golevel: 6
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0042173_Regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0042174
description: Negative regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042174
golevel: 7
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0042174_Negative_regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0042777
description: Proton motive force-driven plasma membrane ATP synthesis
memo: https://amigo.geneontology.org/amigo/term/GO:0042777
golevel: 13
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0042777_Proton_motive_force-driven_plasma_membrane_ATP_synthesis


id: GO:0043225
description: ATPase-coupled inorganic anion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043225
golevel: 6
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0043225_ATPase-coupled_inorganic_anion_transmembrane_transporter_activity


id: GO:0043365
description: [formate-C-acetyltransferase]-activating enzyme activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043365
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0043365_[formate-C-acetyltransferase]-activating_enzyme_activity


id: GO:0043772
description: Acyl-phosphate glycerol-3-phosphate acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043772
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0043772_Acyl-phosphate_glycerol-3-phosphate_acyltransferase_activity


id: GO:0043811
description: Phosphate:acyl-[acyl carrier protein] acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043811
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0043811_Phosphate:acyl-[acyl_carrier_protein]_acyltransferase_activity


id: GO:0044419
description: Biological process involved in interspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0044419
golevel: 1
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0044419_Biological_process_involved_in_interspecies_interaction_between_organisms


id: GO:0044769
description: ATPase activity, coupled to transmembrane movement of ions, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0044769
golevel: 7
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0044769_ATPase_activity,_coupled_to_transmembrane_movement_of_ions,_rotational_mechanism


id: GO:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
golevel: 6
name:
  GOCC.STRING_v12.0_1160721_STRINGid_GO:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GO:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
golevel: 6
name:
  GOCC.STRING_v12.0_1160721_STRINGid_GO:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GO:0045881
description: Positive regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0045881
golevel: 7
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0045881_Positive_regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0045934
description: Negative regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045934
golevel: 6
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0045934_Negative_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0045935
description: Positive regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045935
golevel: 6
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0045935_Positive_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0046429
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046429
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0046429_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_synthase_activity


id: GO:0046537
description: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046537
golevel: 6
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0046537_2,3-bisphosphoglycerate-independent_phosphoglycerate_mutase_activity


id: GO:0046912
description: Acyltransferase activity, acyl groups converted into alkyl on transfer
memo: https://amigo.geneontology.org/amigo/term/GO:0046912
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0046912_Acyltransferase_activity,_acyl_groups_converted_into_alkyl_on_transfer


id: GO:0046915
description: Transition metal ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046915
golevel: 6
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0046915_Transition_metal_ion_transmembrane_transporter_activity


id: GO:0046933
description: Proton-transporting ATP synthase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046933
golevel: 8
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0046933_Proton-transporting_ATP_synthase_activity,_rotational_mechanism


id: GO:0046961
description: Proton-transporting ATPase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046961
golevel: 8
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0046961_Proton-transporting_ATPase_activity,_rotational_mechanism


id: GO:0047151
description: methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase (FADH2-oxidizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047151
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0047151_methylenetetrahydrofolate-tRNA-(uracil-5-)-methyltransferase_(FADH2-oxidizing)_activity


id: GO:0047334
description: diphosphate-fructose-6-phosphate 1-phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047334
golevel: 7
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0047334_diphosphate-fructose-6-phosphate_1-phosphotransferase_activity


id: GO:0047451
description: 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047451
golevel: 6
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0047451_3-hydroxyoctanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0047480
description: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047480
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0047480_UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine_ligase_activity


id: GO:0048646
description: Anatomical structure formation involved in morphogenesis
memo: https://amigo.geneontology.org/amigo/term/GO:0048646
golevel: 2
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0048646_Anatomical_structure_formation_involved_in_morphogenesis


id: GO:0050511
description: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050511
golevel: 6
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0050511_Undecaprenyldiphospho-muramoylpentapeptide_beta-N-acetylglucosaminyltransferase_activity


id: GO:0050515
description: 4-(cytidine 5-diphospho)-2-C-methyl-D-erythritol kinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050515
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0050515_4-(cytidine_5-diphospho)-2-C-methyl-D-erythritol_kinase_activity


id: GO:0050518
description: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050518
golevel: 6
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0050518_2-C-methyl-D-erythritol_4-phosphate_cytidylyltransferase_activity


id: GO:0050566
description: asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050566
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0050566_asparaginyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0050567
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050567
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0050567_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0051003
description: Ligase activity, forming nitrogen-metal bonds, forming coordination complexes
memo: https://amigo.geneontology.org/amigo/term/GO:0051003
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0051003_Ligase_activity,_forming_nitrogen-metal_bonds,_forming_coordination_complexes


id: GO:0051075
description: S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051075
golevel: 3
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0051075_S-adenosylmethionine:tRNA_ribosyltransferase-isomerase_activity


id: GO:0051172
description: Negative regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051172
golevel: 5
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0051172_Negative_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051173
description: Positive regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051173
golevel: 5
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0051173_Positive_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051703
description: Biological process involved in intraspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0051703
golevel: 1
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0051703_Biological_process_involved_in_intraspecies_interaction_between_organisms


id: GO:0051745
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051745
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0051745_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_reductase_activity


id: GO:0051991
memo: https://amigo.geneontology.org/amigo/term/GO:0051991
golevel: 6
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0051991_UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol_4-beta-N-acetylglucosaminlytransferase_activity

description:
  UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity


id: GO:0051992
memo: https://amigo.geneontology.org/amigo/term/GO:0051992
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0051992_UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate_transferase_activity

description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity


id: GO:0052592
description: Oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0052592
golevel: 4
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0052592_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_with_an_iron-sulfur_protein_as_acceptor


id: GO:0052908
description: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052908
golevel: 9
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0052908_16S_rRNA_(adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase_activity


id: GO:0055052
description: ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing
memo: https://amigo.geneontology.org/amigo/term/GO:0055052
golevel: 7
name:
  GOCC.STRING_v12.0_1160721_STRINGid_GO:0055052_ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing


id: GO:0055086
description: Nucleobase-containing small molecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0055086
golevel: 3
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0055086_Nucleobase-containing_small_molecule_metabolic_process


id: GO:0061504
description: Cyclic threonylcarbamoyladenosine biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0061504
golevel: 11
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0061504_Cyclic_threonylcarbamoyladenosine_biosynthetic_process


id: GO:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
golevel: 4
name:
  GOCC.STRING_v12.0_1160721_STRINGid_GO:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GO:0070626
memo: https://amigo.geneontology.org/amigo/term/GO:0070626
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0070626_(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)_succinate_lyase_(fumarate-forming)_activity

description:
  (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity


id: GO:0070647
description: Protein modification by small protein conjugation or removal
memo: https://amigo.geneontology.org/amigo/term/GO:0070647
golevel: 6
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0070647_Protein_modification_by_small_protein_conjugation_or_removal


id: GO:0071951
description: Conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
memo: https://amigo.geneontology.org/amigo/term/GO:0071951
golevel: 12
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0071951_Conversion_of_methionyl-tRNA_to_N-formyl-methionyl-tRNA


id: GO:0072349
description: Modified amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0072349
golevel: 3
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0072349_Modified_amino_acid_transmembrane_transporter_activity


id: GO:0072599
description: Establishment of protein localization to endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0072599
golevel: 7
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0072599_Establishment_of_protein_localization_to_endoplasmic_reticulum


id: GO:0097588
description: Archaeal or bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:0097588
golevel: 4
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0097588_Archaeal_or_bacterial-type_flagellum-dependent_cell_motility


id: GO:0102752
memo: https://amigo.geneontology.org/amigo/term/GO:0102752
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0102752_1,4-alpha-glucan_branching_enzyme_activity_(using_a_glucosylated_glycogenin_as_primer_for_glycogen_synthesis)

description:
  1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis)


id: GO:0106074
description: aminoacyl-tRNA metabolism involved in translational fidelity
memo: https://amigo.geneontology.org/amigo/term/GO:0106074
golevel: 9
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:0106074_aminoacyl-tRNA_metabolism_involved_in_translational_fidelity


id: GO:0140078
description: Class I DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0140078
golevel: 5
name:
  GOMF.STRING_v12.0_1160721_STRINGid_GO:0140078_Class_I_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:1900191
description: Negative regulation of single-species biofilm formation
memo: https://amigo.geneontology.org/amigo/term/GO:1900191
golevel: 7
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:1900191_Negative_regulation_of_single-species_biofilm_formation


id: GO:1900192
description: Positive regulation of single-species biofilm formation
memo: https://amigo.geneontology.org/amigo/term/GO:1900192
golevel: 7
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:1900192_Positive_regulation_of_single-species_biofilm_formation


id: GO:1903507
description: Negative regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903507
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:1903507_Negative_regulation_of_nucleic_acid-templated_transcription


id: GO:1903508
description: Positive regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903508
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:1903508_Positive_regulation_of_nucleic_acid-templated_transcription


id: GO:2000112
description: Regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000112
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:2000112_Regulation_of_cellular_macromolecule_biosynthetic_process


id: GO:2000113
description: Negative regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000113
name:
  GOBP.STRING_v12.0_1160721_STRINGid_GO:2000113_Negative_regulation_of_cellular_macromolecule_biosynthetic_process


id: GOCC:0000015
description: Phosphopyruvate hydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000015
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0000015_Phosphopyruvate_hydratase_complex


id: GOCC:0000159
description: Protein phosphatase type 2A complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000159
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0000159_Protein_phosphatase_type_2A_complex


id: GOCC:0000221
description: Vacuolar proton-transporting V-type ATPase, V1 domain
memo: https://amigo.geneontology.org/amigo/term/GO:0000221
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0000221_Vacuolar_proton-transporting_V-type_ATPase,_V1_domain


id: GOCC:0000325
description: Plant-type vacuole
memo: https://amigo.geneontology.org/amigo/term/GO:0000325
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0000325_Plant-type_vacuole


id: GOCC:0000408
description: EKC/KEOPS complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000408
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0000408_EKC/KEOPS_complex


id: GOCC:0000428
description: DNA-directed RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000428
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0000428_DNA-directed_RNA_polymerase_complex


id: GOCC:0000502
description: Proteasome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000502
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0000502_Proteasome_complex


id: GOCC:0000775
description: Chromosome, centromeric region
memo: https://amigo.geneontology.org/amigo/term/GO:0000775
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0000775_Chromosome,_centromeric_region


id: GOCC:0000779
description: Condensed chromosome, centromeric region
memo: https://amigo.geneontology.org/amigo/term/GO:0000779
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0000779_Condensed_chromosome,_centromeric_region


id: GOCC:0000781
description: Chromosome, telomeric region
memo: https://amigo.geneontology.org/amigo/term/GO:0000781
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0000781_Chromosome,_telomeric_region


id: GOCC:0000793
description: Condensed chromosome
memo: https://amigo.geneontology.org/amigo/term/GO:0000793
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0000793_Condensed_chromosome


id: GOCC:0000930
description: Gamma-tubulin complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000930
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0000930_Gamma-tubulin_complex


id: GOCC:0000931
description: Gamma-tubulin large complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000931
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0000931_Gamma-tubulin_large_complex


id: GOCC:0002189
description: Ribose phosphate diphosphokinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0002189
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0002189_Ribose_phosphate_diphosphokinase_complex


id: GOCC:0005576
description: Extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0005576
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0005576_Extracellular_region


id: GOCC:0005615
description: Extracellular space
memo: https://amigo.geneontology.org/amigo/term/GO:0005615
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0005615_Extracellular_space


id: GOCC:0005727
description: Extrachromosomal circular DNA
memo: https://amigo.geneontology.org/amigo/term/GO:0005727
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0005727_Extrachromosomal_circular_DNA


id: GOCC:0005759
description: Mitochondrial matrix
memo: https://amigo.geneontology.org/amigo/term/GO:0005759
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0005759_Mitochondrial_matrix


id: GOCC:0005774
description: Vacuolar membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005774
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0005774_Vacuolar_membrane


id: GOCC:0005778
description: Peroxisomal membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005778
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0005778_Peroxisomal_membrane


id: GOCC:0005783
description: Endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0005783
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0005783_Endoplasmic_reticulum


id: GOCC:0005788
description: Endoplasmic reticulum lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0005788
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0005788_Endoplasmic_reticulum_lumen


id: GOCC:0005789
description: Endoplasmic reticulum membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005789
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0005789_Endoplasmic_reticulum_membrane


id: GOCC:0005793
description: Endoplasmic reticulum-Golgi intermediate compartment
memo: https://amigo.geneontology.org/amigo/term/GO:0005793
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0005793_Endoplasmic_reticulum-Golgi_intermediate_compartment


id: GOCC:0005798
description: Golgi-associated vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0005798
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0005798_Golgi-associated_vesicle


id: GOCC:0005815
description: Microtubule organizing center
memo: https://amigo.geneontology.org/amigo/term/GO:0005815
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0005815_Microtubule_organizing_center


id: GOCC:0005835
description: Fatty acid synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005835
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0005835_Fatty_acid_synthase_complex


id: GOCC:0005847
description: mRNA cleavage and polyadenylation specificity factor complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005847
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0005847_mRNA_cleavage_and_polyadenylation_specificity_factor_complex


id: GOCC:0005849
description: mRNA cleavage factor complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005849
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0005849_mRNA_cleavage_factor_complex


id: GOCC:0005882
description: Intermediate filament
memo: https://amigo.geneontology.org/amigo/term/GO:0005882
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0005882_Intermediate_filament


id: GOCC:0005887
description: Integral component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005887
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0005887_Integral_component_of_plasma_membrane


id: GOCC:0005911
description: Cell-cell junction
memo: https://amigo.geneontology.org/amigo/term/GO:0005911
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0005911_Cell-cell_junction


id: GOCC:0005945
description: 6-phosphofructokinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005945
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0005945_6-phosphofructokinase_complex


id: GOCC:0005948
description: Acetolactate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005948
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0005948_Acetolactate_synthase_complex


id: GOCC:0005951
description: Carbamoyl-phosphate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005951
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0005951_Carbamoyl-phosphate_synthase_complex


id: GOCC:0005963
description: Magnesium-dependent protein serine/threonine phosphatase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005963
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0005963_Magnesium-dependent_protein_serine/threonine_phosphatase_complex


id: GOCC:0008076
description: Voltage-gated potassium channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0008076
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0008076_Voltage-gated_potassium_channel_complex


id: GOCC:0008287
description: Protein serine/threonine phosphatase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0008287
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0008287_Protein_serine/threonine_phosphatase_complex


id: GOCC:0009279
description: Cell outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009279
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0009279_Cell_outer_membrane


id: GOCC:0009288
description: Bacterial-type flagellum
memo: https://amigo.geneontology.org/amigo/term/GO:0009288
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0009288_Bacterial-type_flagellum


id: GOCC:0009316
description: 3-isopropylmalate dehydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009316
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0009316_3-isopropylmalate_dehydratase_complex


id: GOCC:0009317
description: acetyl-CoA carboxylase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009317
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0009317_acetyl-CoA_carboxylase_complex


id: GOCC:0009318
description: Exodeoxyribonuclease VII complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009318
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0009318_Exodeoxyribonuclease_VII_complex


id: GOCC:0009326
description: Formate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009326
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0009326_Formate_dehydrogenase_complex


id: GOCC:0009331
description: glycerol-3-phosphate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009331
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0009331_glycerol-3-phosphate_dehydrogenase_complex


id: GOCC:0009337
description: Sulfite reductase complex (NADPH)
memo: https://amigo.geneontology.org/amigo/term/GO:0009337
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0009337_Sulfite_reductase_complex_(NADPH)


id: GOCC:0009338
description: Exodeoxyribonuclease V complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009338
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0009338_Exodeoxyribonuclease_V_complex


id: GOCC:0009341
description: Beta-galactosidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009341
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0009341_Beta-galactosidase_complex


id: GOCC:0009347
description: Aspartate carbamoyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009347
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0009347_Aspartate_carbamoyltransferase_complex


id: GOCC:0009358
description: Polyphosphate kinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009358
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0009358_Polyphosphate_kinase_complex


id: GOCC:0009360
description: DNA polymerase III complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009360
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0009360_DNA_polymerase_III_complex


id: GOCC:0009368
description: Endopeptidase Clp complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009368
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0009368_Endopeptidase_Clp_complex


id: GOCC:0009376
description: HslUV protease complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009376
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0009376_HslUV_protease_complex


id: GOCC:0009379
description: Holliday junction helicase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009379
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0009379_Holliday_junction_helicase_complex


id: GOCC:0009380
description: Excinuclease repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009380
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0009380_Excinuclease_repair_complex


id: GOCC:0009505
description: Plant-type cell wall
memo: https://amigo.geneontology.org/amigo/term/GO:0009505
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0009505_Plant-type_cell_wall


id: GOCC:0009538
description: Photosystem I reaction center
memo: https://amigo.geneontology.org/amigo/term/GO:0009538
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0009538_Photosystem_I_reaction_center


id: GOCC:0009570
description: Chloroplast stroma
memo: https://amigo.geneontology.org/amigo/term/GO:0009570
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0009570_Chloroplast_stroma


id: GOCC:0009654
description: Photosystem II oxygen evolving complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009654
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0009654_Photosystem_II_oxygen_evolving_complex


id: GOCC:0009897
description: External side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009897
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0009897_External_side_of_plasma_membrane


id: GOCC:0009898
description: Cytoplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009898
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0009898_Cytoplasmic_side_of_plasma_membrane


id: GOCC:0009941
description: Chloroplast envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0009941
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0009941_Chloroplast_envelope


id: GOCC:0010170
description: glucose-1-phosphate adenylyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0010170
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0010170_glucose-1-phosphate_adenylyltransferase_complex


id: GOCC:0012505
description: Endomembrane system
memo: https://amigo.geneontology.org/amigo/term/GO:0012505
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0012505_Endomembrane_system


id: GOCC:0012507
description: ER to Golgi transport vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0012507
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0012507_ER_to_Golgi_transport_vesicle_membrane


id: GOCC:0015627
description: Type II protein secretion system complex
memo: https://amigo.geneontology.org/amigo/term/GO:0015627
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0015627_Type_II_protein_secretion_system_complex


id: GOCC:0015629
description: Actin cytoskeleton
memo: https://amigo.geneontology.org/amigo/term/GO:0015629
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0015629_Actin_cytoskeleton


id: GOCC:0015630
description: Microtubule cytoskeleton
memo: https://amigo.geneontology.org/amigo/term/GO:0015630
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0015630_Microtubule_cytoskeleton


id: GOCC:0015934
description: Large ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0015934
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0015934_Large_ribosomal_subunit


id: GOCC:0015935
description: Small ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0015935
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0015935_Small_ribosomal_subunit


id: GOCC:0016021
description: Integral component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0016021
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0016021_Integral_component_of_membrane


id: GOCC:0016465
description: Chaperonin ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016465
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0016465_Chaperonin_ATPase_complex


id: GOCC:0016469
description: Proton-transporting two-sector ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016469
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0016469_Proton-transporting_two-sector_ATPase_complex


id: GOCC:0016471
description: Vacuolar proton-transporting V-type ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016471
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0016471_Vacuolar_proton-transporting_V-type_ATPase_complex


id: GOCC:0016610
description: Nitrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016610
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0016610_Nitrogenase_complex


id: GOCC:0016612
description: Molybdenum-iron nitrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016612
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0016612_Molybdenum-iron_nitrogenase_complex


id: GOCC:0017122
description: Protein N-acetylglucosaminyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0017122
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0017122_Protein_N-acetylglucosaminyltransferase_complex


id: GOCC:0018995
description: Host cellular component
memo: https://amigo.geneontology.org/amigo/term/GO:0018995
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0018995_Host_cellular_component


id: GOCC:0019008
description: Molybdopterin synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0019008
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0019008_Molybdopterin_synthase_complex


id: GOCC:0019866
description: Organelle inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019866
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0019866_Organelle_inner_membrane


id: GOCC:0019897
description: Extrinsic component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019897
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0019897_Extrinsic_component_of_plasma_membrane


id: GOCC:0019898
description: Extrinsic component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019898
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0019898_Extrinsic_component_of_membrane


id: GOCC:0022625
description: Cytosolic large ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0022625
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0022625_Cytosolic_large_ribosomal_subunit


id: GOCC:0022626
description: Cytosolic ribosome
memo: https://amigo.geneontology.org/amigo/term/GO:0022626
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0022626_Cytosolic_ribosome


id: GOCC:0022627
description: Cytosolic small ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0022627
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0022627_Cytosolic_small_ribosomal_subunit


id: GOCC:0030075
description: Bacterial thylakoid
memo: https://amigo.geneontology.org/amigo/term/GO:0030075
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0030075_Bacterial_thylakoid


id: GOCC:0030076
description: Light-harvesting complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030076
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0030076_Light-harvesting_complex


id: GOCC:0030077
description: Plasma membrane light-harvesting complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030077
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0030077_Plasma_membrane_light-harvesting_complex


id: GOCC:0030127
description: COPII vesicle coat
memo: https://amigo.geneontology.org/amigo/term/GO:0030127
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0030127_COPII_vesicle_coat


id: GOCC:0030133
description: Transport vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0030133
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0030133_Transport_vesicle


id: GOCC:0030134
description: COPII-coated ER to Golgi transport vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0030134
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0030134_COPII-coated_ER_to_Golgi_transport_vesicle


id: GOCC:0030139
description: Endocytic vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0030139
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0030139_Endocytic_vesicle


id: GOCC:0030288
description: Outer membrane-bounded periplasmic space
memo: https://amigo.geneontology.org/amigo/term/GO:0030288
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0030288_Outer_membrane-bounded_periplasmic_space


id: GOCC:0030312
description: External encapsulating structure
memo: https://amigo.geneontology.org/amigo/term/GO:0030312
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0030312_External_encapsulating_structure


id: GOCC:0030658
description: Transport vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030658
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0030658_Transport_vesicle_membrane


id: GOCC:0030659
description: Cytoplasmic vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030659
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0030659_Cytoplasmic_vesicle_membrane


id: GOCC:0030660
description: Golgi-associated vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030660
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0030660_Golgi-associated_vesicle_membrane


id: GOCC:0030662
description: Coated vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030662
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0030662_Coated_vesicle_membrane


id: GOCC:0030677
description: Ribonuclease P complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030677
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0030677_Ribonuclease_P_complex


id: GOCC:0030880
description: RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030880
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0030880_RNA_polymerase_complex


id: GOCC:0030956
description: glutamyl-tRNA(Gln) amidotransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030956
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0030956_glutamyl-tRNA(Gln)_amidotransferase_complex


id: GOCC:0030964
description: NADH dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030964
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0030964_NADH_dehydrogenase_complex


id: GOCC:0031012
description: Extracellular matrix
memo: https://amigo.geneontology.org/amigo/term/GO:0031012
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0031012_Extracellular_matrix


id: GOCC:0031090
description: Organelle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031090
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0031090_Organelle_membrane


id: GOCC:0031224
description: Intrinsic component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031224
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0031224_Intrinsic_component_of_membrane


id: GOCC:0031225
description: Anchored component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031225
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0031225_Anchored_component_of_membrane


id: GOCC:0031226
description: Intrinsic component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031226
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0031226_Intrinsic_component_of_plasma_membrane


id: GOCC:0031250
description: Anaerobic ribonucleoside-triphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031250
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0031250_Anaerobic_ribonucleoside-triphosphate_reductase_complex


id: GOCC:0031410
description: Cytoplasmic vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0031410
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0031410_Cytoplasmic_vesicle


id: GOCC:0031469
description: Polyhedral organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0031469
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0031469_Polyhedral_organelle


id: GOCC:0031515
description: tRNA (m1A) methyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031515
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0031515_tRNA_(m1A)_methyltransferase_complex


id: GOCC:0031588
description: Nucleotide-activated protein kinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031588
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0031588_Nucleotide-activated_protein_kinase_complex


id: GOCC:0031597
description: Cytosolic proteasome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031597
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0031597_Cytosolic_proteasome_complex


id: GOCC:0031903
description: Microbody membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031903
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0031903_Microbody_membrane


id: GOCC:0031967
description: Organelle envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0031967
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0031967_Organelle_envelope


id: GOCC:0031974
description: Membrane-enclosed lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0031974
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0031974_Membrane-enclosed_lumen


id: GOCC:0031984
description: Organelle subcompartment
memo: https://amigo.geneontology.org/amigo/term/GO:0031984
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0031984_Organelle_subcompartment


id: GOCC:0032153
description: Cell division site
memo: https://amigo.geneontology.org/amigo/term/GO:0032153
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0032153_Cell_division_site


id: GOCC:0032299
description: Ribonuclease H2 complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032299
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0032299_Ribonuclease_H2_complex


id: GOCC:0032300
description: Mismatch repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032300
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0032300_Mismatch_repair_complex


id: GOCC:0032991
description: Protein-containing complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032991
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0032991_Protein-containing_complex


id: GOCC:0032993
description: protein-DNA complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032993
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0032993_protein-DNA_complex


id: GOCC:0033176
description: Proton-transporting V-type ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0033176
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0033176_Proton-transporting_V-type_ATPase_complex


id: GOCC:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GOCC:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GOCC:0033179
description: Proton-transporting V-type ATPase, V0 domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033179
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0033179_Proton-transporting_V-type_ATPase,_V0_domain


id: GOCC:0033180
description: Proton-transporting V-type ATPase, V1 domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033180
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0033180_Proton-transporting_V-type_ATPase,_V1_domain


id: GOCC:0033202
description: DNA helicase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0033202
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0033202_DNA_helicase_complex


id: GOCC:0033588
description: Elongator holoenzyme complex
memo: https://amigo.geneontology.org/amigo/term/GO:0033588
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0033588_Elongator_holoenzyme_complex


id: GOCC:0034357
description: Photosynthetic membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0034357
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0034357_Photosynthetic_membrane


id: GOCC:0034702
description: Ion channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034702
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0034702_Ion_channel_complex


id: GOCC:0034703
description: Cation channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034703
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0034703_Cation_channel_complex


id: GOCC:0034705
description: Potassium channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034705
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0034705_Potassium_channel_complex


id: GOCC:0034707
description: Chloride channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034707
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0034707_Chloride_channel_complex


id: GOCC:0034708
description: Methyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034708
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0034708_Methyltransferase_complex


id: GOCC:0035861
description: Site of double-strand break
memo: https://amigo.geneontology.org/amigo/term/GO:0035861
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0035861_Site_of_double-strand_break


id: GOCC:0042175
description: Nuclear outer membrane-endoplasmic reticulum membrane network
memo: https://amigo.geneontology.org/amigo/term/GO:0042175
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0042175_Nuclear_outer_membrane-endoplasmic_reticulum_membrane_network


id: GOCC:0042575
description: DNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0042575
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0042575_DNA_polymerase_complex


id: GOCC:0042597
description: Periplasmic space
memo: https://amigo.geneontology.org/amigo/term/GO:0042597
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0042597_Periplasmic_space


id: GOCC:0042601
description: Endospore-forming forespore
memo: https://amigo.geneontology.org/amigo/term/GO:0042601
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0042601_Endospore-forming_forespore


id: GOCC:0042651
description: Thylakoid membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0042651
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0042651_Thylakoid_membrane


id: GOCC:0042716
description: Plasma membrane-derived chromatophore
memo: https://amigo.geneontology.org/amigo/term/GO:0042716
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0042716_Plasma_membrane-derived_chromatophore


id: GOCC:0042717
description: Plasma membrane-derived chromatophore membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0042717
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0042717_Plasma_membrane-derived_chromatophore_membrane


id: GOCC:0042763
description: Intracellular immature spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042763
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0042763_Intracellular_immature_spore


id: GOCC:0043005
description: Neuron projection
memo: https://amigo.geneontology.org/amigo/term/GO:0043005
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0043005_Neuron_projection


id: GOCC:0043190
description: ATP-binding cassette (ABC) transporter complex
memo: https://amigo.geneontology.org/amigo/term/GO:0043190
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0043190_ATP-binding_cassette_(ABC)_transporter_complex


id: GOCC:0043227
description: Membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043227
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0043227_Membrane-bounded_organelle


id: GOCC:0043228
description: Non-membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043228
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0043228_Non-membrane-bounded_organelle


id: GOCC:0043229
description: Intracellular organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043229
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0043229_Intracellular_organelle


id: GOCC:0043230
description: Extracellular organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043230
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0043230_Extracellular_organelle


id: GOCC:0043231
description: Intracellular membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043231
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0043231_Intracellular_membrane-bounded_organelle


id: GOCC:0043232
description: Intracellular non-membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043232
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0043232_Intracellular_non-membrane-bounded_organelle


id: GOCC:0043527
description: tRNA methyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0043527
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0043527_tRNA_methyltransferase_complex


id: GOCC:0043590
description: Bacterial nucleoid
memo: https://amigo.geneontology.org/amigo/term/GO:0043590
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0043590_Bacterial_nucleoid


id: GOCC:0043684
description: Type IV secretion system complex
memo: https://amigo.geneontology.org/amigo/term/GO:0043684
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0043684_Type_IV_secretion_system_complex


id: GOCC:0044391
description: Ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0044391
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0044391_Ribosomal_subunit


id: GOCC:0044815
description: DNA packaging complex
memo: https://amigo.geneontology.org/amigo/term/GO:0044815
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0044815_DNA_packaging_complex


id: GOCC:0044853
description: Plasma membrane raft
memo: https://amigo.geneontology.org/amigo/term/GO:0044853
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0044853_Plasma_membrane_raft


id: GOCC:0045111
description: Intermediate filament cytoskeleton
memo: https://amigo.geneontology.org/amigo/term/GO:0045111
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0045111_Intermediate_filament_cytoskeleton


id: GOCC:0045259
description: Proton-transporting ATP synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0045259
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0045259_Proton-transporting_ATP_synthase_complex


id: GOCC:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GOCC:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GOCC:0045271
description: Respiratory chain complex I
memo: https://amigo.geneontology.org/amigo/term/GO:0045271
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0045271_Respiratory_chain_complex_I


id: GOCC:0045272
description: Plasma membrane respiratory chain complex I
memo: https://amigo.geneontology.org/amigo/term/GO:0045272
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0045272_Plasma_membrane_respiratory_chain_complex_I


id: GOCC:0045335
description: Phagocytic vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0045335
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0045335_Phagocytic_vesicle


id: GOCC:0046658
description: Anchored component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0046658
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0046658_Anchored_component_of_plasma_membrane


id: GOCC:0046821
description: Extrachromosomal DNA
memo: https://amigo.geneontology.org/amigo/term/GO:0046821
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0046821_Extrachromosomal_DNA


id: GOCC:0048471
description: Perinuclear region of cytoplasm
memo: https://amigo.geneontology.org/amigo/term/GO:0048471
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0048471_Perinuclear_region_of_cytoplasm


id: GOCC:0048476
description: Holliday junction resolvase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0048476
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0048476_Holliday_junction_resolvase_complex


id: GOCC:0048500
description: Signal recognition particle
memo: https://amigo.geneontology.org/amigo/term/GO:0048500
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0048500_Signal_recognition_particle


id: GOCC:0055040
description: Periplasmic flagellum
memo: https://amigo.geneontology.org/amigo/term/GO:0055040
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0055040_Periplasmic_flagellum


id: GOCC:0055052
description: ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing
memo: https://amigo.geneontology.org/amigo/term/GO:0055052
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0055052_ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing


id: GOCC:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GOCC:0065010
description: Extracellular membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0065010
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0065010_Extracellular_membrane-bounded_organelle


id: GOCC:0070013
description: Intracellular organelle lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0070013
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0070013_Intracellular_organelle_lumen


id: GOCC:0070062
description: Extracellular exosome
memo: https://amigo.geneontology.org/amigo/term/GO:0070062
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0070062_Extracellular_exosome


id: GOCC:0070161
description: Anchoring junction
memo: https://amigo.geneontology.org/amigo/term/GO:0070161
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0070161_Anchoring_junction


id: GOCC:0070470
description: Plasma membrane respirasome
memo: https://amigo.geneontology.org/amigo/term/GO:0070470
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0070470_Plasma_membrane_respirasome


id: GOCC:0072669
description: tRNA-splicing ligase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0072669
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0072669_tRNA-splicing_ligase_complex


id: GOCC:0090734
description: Site of DNA damage
memo: https://amigo.geneontology.org/amigo/term/GO:0090734
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0090734_Site_of_DNA_damage


id: GOCC:0097708
description: Intracellular vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0097708
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0097708_Intracellular_vesicle


id: GOCC:0098533
description: ATPase dependent transmembrane transport complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098533
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0098533_ATPase_dependent_transmembrane_transport_complex


id: GOCC:0098561
description: Methyl accepting chemotaxis protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098561
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0098561_Methyl_accepting_chemotaxis_protein_complex


id: GOCC:0098562
description: Cytoplasmic side of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0098562
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0098562_Cytoplasmic_side_of_membrane


id: GOCC:0098567
description: Periplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0098567
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0098567_Periplasmic_side_of_plasma_membrane


id: GOCC:0098588
description: Bounding membrane of organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0098588
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0098588_Bounding_membrane_of_organelle


id: GOCC:0098590
description: Plasma membrane region
memo: https://amigo.geneontology.org/amigo/term/GO:0098590
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0098590_Plasma_membrane_region


id: GOCC:0098687
description: Chromosomal region
memo: https://amigo.geneontology.org/amigo/term/GO:0098687
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0098687_Chromosomal_region


id: GOCC:0098796
description: Membrane protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098796
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0098796_Membrane_protein_complex


id: GOCC:0098797
description: Plasma membrane protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098797
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0098797_Plasma_membrane_protein_complex


id: GOCC:0098803
description: Respiratory chain complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098803
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0098803_Respiratory_chain_complex


id: GOCC:0098827
description: Endoplasmic reticulum subcompartment
memo: https://amigo.geneontology.org/amigo/term/GO:0098827
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0098827_Endoplasmic_reticulum_subcompartment


id: GOCC:0098857
description: Membrane microdomain
memo: https://amigo.geneontology.org/amigo/term/GO:0098857
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0098857_Membrane_microdomain


id: GOCC:0099023
description: Vesicle tethering complex
memo: https://amigo.geneontology.org/amigo/term/GO:0099023
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0099023_Vesicle_tethering_complex


id: GOCC:0099080
description: Supramolecular complex
memo: https://amigo.geneontology.org/amigo/term/GO:0099080
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0099080_Supramolecular_complex


id: GOCC:0099081
description: Supramolecular polymer
memo: https://amigo.geneontology.org/amigo/term/GO:0099081
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0099081_Supramolecular_polymer


id: GOCC:0099512
description: Supramolecular fiber
memo: https://amigo.geneontology.org/amigo/term/GO:0099512
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0099512_Supramolecular_fiber


id: GOCC:0099513
description: Polymeric cytoskeletal fiber
memo: https://amigo.geneontology.org/amigo/term/GO:0099513
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0099513_Polymeric_cytoskeletal_fiber


id: GOCC:0101031
description: Chaperone complex
memo: https://amigo.geneontology.org/amigo/term/GO:0101031
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0101031_Chaperone_complex


id: GOCC:0110165
description: Cellular anatomical entity
memo: https://amigo.geneontology.org/amigo/term/GO:0110165
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0110165_Cellular_anatomical_entity


id: GOCC:0120025
description: Plasma membrane bounded cell projection
memo: https://amigo.geneontology.org/amigo/term/GO:0120025
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:0120025_Plasma_membrane_bounded_cell_projection


id: GOCC:1902494
description: Catalytic complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902494
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:1902494_Catalytic_complex


id: GOCC:1902495
description: Transmembrane transporter complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902495
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:1902495_Transmembrane_transporter_complex


id: GOCC:1902503
description: Adenylyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902503
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:1902503_Adenylyltransferase_complex


id: GOCC:1902555
description: Endoribonuclease complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902555
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:1902555_Endoribonuclease_complex


id: GOCC:1902560
description: GMP reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902560
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:1902560_GMP_reductase_complex


id: GOCC:1902911
description: Protein kinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902911
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:1902911_Protein_kinase_complex


id: GOCC:1903293
description: Phosphatase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1903293
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:1903293_Phosphatase_complex


id: GOCC:1903561
description: Extracellular vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:1903561
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:1903561_Extracellular_vesicle


id: GOCC:1905347
description: Endodeoxyribonuclease complex
memo: https://amigo.geneontology.org/amigo/term/GO:1905347
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:1905347_Endodeoxyribonuclease_complex


id: GOCC:1905348
description: Endonuclease complex
memo: https://amigo.geneontology.org/amigo/term/GO:1905348
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:1905348_Endonuclease_complex


id: GOCC:1905368
description: Peptidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1905368
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:1905368_Peptidase_complex


id: GOCC:1905369
description: Endopeptidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1905369
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:1905369_Endopeptidase_complex


id: GOCC:1990065
description: Dxr protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990065
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:1990065_Dxr_protein_complex


id: GOCC:1990077
description: Primosome complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990077
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:1990077_Primosome_complex


id: GOCC:1990204
description: Oxidoreductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990204
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:1990204_Oxidoreductase_complex


id: GOCC:1990220
description: GroEL-GroES complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990220
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:1990220_GroEL-GroES_complex


id: GOCC:1990221
description: L-cysteine desulfurase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990221
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:1990221_L-cysteine_desulfurase_complex


id: GOCC:1990228
description: Sulfurtransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990228
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:1990228_Sulfurtransferase_complex


id: GOCC:1990229
description: Iron-sulfur cluster assembly complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990229
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:1990229_Iron-sulfur_cluster_assembly_complex


id: GOCC:1990234
description: Transferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990234
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:1990234_Transferase_complex


id: GOCC:1990281
description: Efflux pump complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990281
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:1990281_Efflux_pump_complex


id: GOCC:1990329
description: IscS-TusA complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990329
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:1990329_IscS-TusA_complex


id: GOCC:1990330
description: IscS-IscU complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990330
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:1990330_IscS-IscU_complex


id: GOCC:1990351
description: Transporter complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990351
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:1990351_Transporter_complex


id: GOCC:1990391
description: DNA repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990391
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:1990391_DNA_repair_complex


id: GOCC:1990904
description: Ribonucleoprotein complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990904
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1160721_STRINGid_GOCC:1990904_Ribonucleoprotein_complex


id: IPR000023
description: Phosphofructokinase domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000023
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1160721_STRINGid_IPR000023_Phosphofructokinase_domain


id: IPR000032
description: Phosphocarrier protein HPr-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000032
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1160721_STRINGid_IPR000032_Phosphocarrier_protein_HPr-like


id: IPR000037
description: SsrA-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000037
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1160721_STRINGid_IPR000037_SsrA-binding_protein


id: IPR000043
description: Adenosylhomocysteinase-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000043
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1160721_STRINGid_IPR000043_Adenosylhomocysteinase-like


id: IPR000045
description: Prepilin type IV endopeptidase, peptidase domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000045
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1160721_STRINGid_IPR000045_Prepilin_type_IV_endopeptidase,_peptidase_domain


id: IPR000055
description: Type I restriction modification DNA specificity domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000055
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1160721_STRINGid_IPR000055_Type_I_restriction_modification_DNA_specificity_domain


id: IPR000056
description: Ribulose-phosphate 3-epimerase-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000056
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1160721_STRINGid_IPR000056_Ribulose-phosphate_3-epimerase-like


