# geneInfo

ensembl_gene_id: HCN_0001
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiation protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: HCN_0004
symbol: gap_1
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: HCN_0005
symbol: HCN_0005
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase; SDR superfamily protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: HCN_0036
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: HCN_0037
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: HCN_0064
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: HCN_0066
symbol: HCN_0066
gene_biotype: protein_coding
description:
  Type III restriction-modification system methylation subunit; Putative adenine-specific DNA methylase.


ensembl_gene_id: HCN_0074
symbol: mqnE
gene_biotype: protein_coding
description:
  Putative radical SAM domain-containing protein; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate.


ensembl_gene_id: HCN_0075
symbol: moaA
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: HCN_0076
symbol: HCN_0076
gene_biotype: protein_coding
description:
  Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.


ensembl_gene_id: HCN_0077
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: HCN_0079
symbol: minC
gene_biotype: protein_coding
description:
  Septum formation inhibitor MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization.


ensembl_gene_id: HCN_0080
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosaminedeacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: HCN_0082
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: HCN_0084
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: HCN_0087
symbol: lpxK
gene_biotype: protein_coding
description:
  Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: HCN_0088
symbol: nadE
gene_biotype: protein_coding
description:
  NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.


ensembl_gene_id: HCN_0089
symbol: HCN_0089
gene_biotype: protein_coding
description:
  Ubiquinol cytochrome c oxidoreductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: HCN_0090
symbol: HCN_0090
gene_biotype: protein_coding
description:
  Ubiquinol cytochrome c oxidoreductase cytochromeb subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: HCN_0102
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: HCN_0105
symbol: rpoN
gene_biotype: protein_coding
description:
  RNA polymerase factor sigma-54; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: HCN_0109
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: HCN_0119
symbol: HCN_0119
gene_biotype: protein_coding
description:
  Undecaprenyl diphosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: HCN_0126
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: HCN_0128
symbol: HCN_0128
gene_biotype: protein_coding
description:
  16S ribosomal RNA methyltransferase RsmE; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: HCN_0131
symbol: mqnC
gene_biotype: protein_coding
description:
  Putative radical SAM domain-containing protein; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: HCN_0150
symbol: argF
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: HCN_0156
symbol: glmU
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine pyrophosphorylase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: HCN_0157
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: HCN_0158
symbol: trmA
gene_biotype: protein_coding
description:
  tRNA (uracil-5-)-methyltransferase; Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA).


ensembl_gene_id: HCN_0162
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: HCN_0163
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: HCN_0164
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA amidotransferase subunitA; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: HCN_0165
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine 5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: HCN_0166
symbol: HCN_0166
gene_biotype: protein_coding
description:
  Hypothetical protein; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: HCN_0167
symbol: fliR
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: HCN_0170
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription elongation factor NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: HCN_0171
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: HCN_0175
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: HCN_0176
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA-(guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: HCN_0177
symbol: rimM
gene_biotype: protein_coding
description:
  Putative 16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: HCN_0184
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: HCN_0185
symbol: fliW
gene_biotype: protein_coding
description:
  Flagellar assembly protein FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.


ensembl_gene_id: HCN_0195
symbol: murG
gene_biotype: protein_coding
description:
  N-acetylglucosaminyl transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: HCN_0196
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: HCN_0200
symbol: plsY
gene_biotype: protein_coding
description:
  Putative glycerol-3-phosphate acyltransferase PlsY; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: HCN_0205
symbol: grpE
gene_biotype: protein_coding
description:
  Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...]


ensembl_gene_id: HCN_0212
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: HCN_0224
symbol: HCN_0224
gene_biotype: protein_coding
description:
  iron(III) ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: HCN_0226
symbol: HCN_0226
gene_biotype: protein_coding
description:
  Hypothetical protein; Similar to plasmid stabilization system addiction module toxin RelE/StbE family.


ensembl_gene_id: HCN_0235
symbol: HCN_0235
gene_biotype: protein_coding
description:
  Hypothetical protein; Similar to cytotoxic translational repressor of toxin-antitoxin stability system RelE/StbE family.


ensembl_gene_id: HCN_0251
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: HCN_0254
symbol: eno
gene_biotype: protein_coding
description:
  Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: HCN_0255
symbol: recA
gene_biotype: protein_coding
description:
  Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: HCN_0256
symbol: mqnD
gene_biotype: protein_coding
description:
  succinyl-CoA ligase subunit alpha; Catalyzes the conversion of cyclic dehypoxanthine futalosine (cyclic DHFL) into 1,4-dihydroxy-6-naphthoate, a step in the biosynthesis of menaquinone (MK, vitamin K2); Belongs to the MqnA/MqnD family. MqnD subfamily.


ensembl_gene_id: HCN_0264
symbol: metAA
gene_biotype: protein_coding
description:
  Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.


ensembl_gene_id: HCN_0267
symbol: waaA
gene_biotype: protein_coding
description:
  Putative 3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: HCN_0271
symbol: HCN_0271
gene_biotype: protein_coding
description:
  Cobalt-zinc-cadmium resistance protein CzcA; Heavy metal efflux pump CzcA family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: HCN_0279
symbol: HCN_0279
gene_biotype: protein_coding
description:
  Dinucleoside polyphosphate hydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family.


ensembl_gene_id: HCN_0280
symbol: HCN_0280
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: HCN_0295
symbol: modB
gene_biotype: protein_coding
description:
  Molybdenum ABC transporter permease protein ModB; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: HCN_0302
symbol: lldP
gene_biotype: protein_coding
description:
  L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: HCN_0308
symbol: HCN_0308
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: HCN_0314
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: HCN_0315
symbol: fliF
gene_biotype: protein_coding
description:
  Flagellar MS-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: HCN_0318
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: HCN_0319
symbol: nrdF
gene_biotype: protein_coding
description:
  Ribonucleotide-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.


ensembl_gene_id: HCN_0324
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: HCN_0327
symbol: lptD
gene_biotype: protein_coding
description:
  Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.


ensembl_gene_id: HCN_0329
symbol: pnp
gene_biotype: protein_coding
description:
  Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: HCN_0330
symbol: atpE
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: HCN_0332
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: HCN_0333
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking GTPase FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.


ensembl_gene_id: HCN_0338
symbol: HCN_0338
gene_biotype: protein_coding
description:
  Hypothetical protein; Hydrolyzes 6-aminopenicillinic acid and 7- aminocephalosporanic acid (ACA) derivatives.


ensembl_gene_id: HCN_0339
symbol: HCN_0339
gene_biotype: protein_coding
description:
  Transcriptional regulator; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: HCN_0342
symbol: pssA
gene_biotype: protein_coding
description:
  Phosphatidylserine synthase PssA; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: HCN_0344
symbol: ftsH_2
gene_biotype: protein_coding
description:
  Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: HCN_0345
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: HCN_0347
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide isomerase.


ensembl_gene_id: HCN_0351
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.


ensembl_gene_id: HCN_0352
symbol: spoT
gene_biotype: protein_coding
description:
  Guanosine-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: HCN_0353
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: HCN_0358
symbol: rimP
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: HCN_0359
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: HCN_0360
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: HCN_0361
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: HCN_0364
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: HCN_0377
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophanyl-tRNA synthetase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: HCN_0382
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: HCN_0384
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: HCN_0387
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: HCN_0388
symbol: ssb
gene_biotype: protein_coding
description:
  Single-strand DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: HCN_0397
symbol: purE
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylasecatalytic subunit; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: HCN_0401
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: HCN_0410
symbol: HCN_0410
gene_biotype: protein_coding
description:
  DNA transformation competence protein ComM; Mg-chetalase related protein/sigma-54 interacting protein.


ensembl_gene_id: HCN_0411
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: HCN_0413
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: HCN_0414
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: HCN_0419
symbol: cmoB
gene_biotype: protein_coding
description:
  Putative methyltransferase; Catalyzes carboxymethyl transfer from carboxy-S-adenosyl-L- methionine (Cx-SAM) to 5-hydroxyuridine (ho5U) to form 5- carboxymethoxyuridine (cmo5U) at position 34 in tRNAs.


ensembl_gene_id: HCN_0421
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: HCN_0429
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: HCN_0432
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: HCN_0433
symbol: fabF
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl carrier protein) synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: HCN_0435
symbol: fabG
gene_biotype: protein_coding
description:
  3-ketoacyl-(acyl-carrier-protein) reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: HCN_0442
symbol: HCN_0442
gene_biotype: protein_coding
description:
  Phosphate ABC transporter permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: HCN_0444
symbol: pstB3
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: HCN_0449
symbol: HCN_0449
gene_biotype: protein_coding
description:
  NifU-like protein; May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins.


ensembl_gene_id: HCN_0460
symbol: rplY
gene_biotype: protein_coding
description:
  50S ribosomal protein L25/general stress proteinCtc; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: HCN_0461
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: HCN_0463
symbol: atpB
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: HCN_0471
symbol: mpr
gene_biotype: protein_coding
description:
  ATP/GTP-binding protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: HCN_0474
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: HCN_0482
symbol: truD
gene_biotype: protein_coding
description:
  Putative tRNA pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.


ensembl_gene_id: HCN_0483
symbol: alr
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: HCN_0485
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: HCN_0486
symbol: dnaJ_2
gene_biotype: protein_coding
description:
  Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]


ensembl_gene_id: HCN_0488
symbol: gmhA
gene_biotype: protein_coding
description:
  Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.


ensembl_gene_id: HCN_0489
symbol: hldE
gene_biotype: protein_coding
description:
  ADP-heptose synthase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: HCN_0493
symbol: HCN_0493
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; A part of nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase.


ensembl_gene_id: HCN_0499
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: HCN_0502
symbol: priA
gene_biotype: protein_coding
description:
  Primosome assembly protein PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: HCN_0504
symbol: fliL
gene_biotype: protein_coding
description:
  Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: HCN_0505
symbol: acpS
gene_biotype: protein_coding
description:
  4'-phosphopantetheinyl transferase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: HCN_0506
symbol: rsfS
gene_biotype: protein_coding
description:
  Putative iojap-related protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: HCN_0507
symbol: nadD
gene_biotype: protein_coding
description:
  Putative nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: HCN_0508
symbol: HCN_0508
gene_biotype: protein_coding
description:
  Nickel responsive regulator; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family.


ensembl_gene_id: HCN_0511
symbol: HCN_0511
gene_biotype: protein_coding
description:
  Siderophore-mediated iron transporter; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.


ensembl_gene_id: HCN_0521
symbol: surE
gene_biotype: protein_coding
description:
  Stationary phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: HCN_0524
symbol: ybaB
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: HCN_0525
symbol: panD
gene_biotype: protein_coding
description:
  Aspartate alpha-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: HCN_0535
symbol: HCN_0535
gene_biotype: protein_coding
description:
  Hydrogenase maturation protein HypF; Involved in the maturation of [NiFe] hydrogenases. Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of [NiFe]-hydrogenases. HypF functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide.


ensembl_gene_id: HCN_0544
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: HCN_0545
symbol: lolA
gene_biotype: protein_coding
description:
  Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: HCN_0547
symbol: trpD
gene_biotype: protein_coding
description:
  Bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: HCN_0550
symbol: hslV
gene_biotype: protein_coding
description:
  ATP-dependent protease peptidase subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: HCN_0551
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity.


ensembl_gene_id: HCN_0552
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: HCN_0555
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: HCN_0558
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: HCN_0559
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: HCN_0560
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: HCN_0561
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: HCN_0562
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: HCN_0563
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: HCN_0565
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: HCN_0566
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: HCN_0567
symbol: rplX
gene_biotype: protein_coding
description:
  50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: HCN_0568
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: HCN_0569
symbol: rpsZ
gene_biotype: protein_coding
description:
  30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: HCN_0570
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: HCN_0571
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: HCN_0572
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: HCN_0573
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: HCN_0574
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: HCN_0575
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: HCN_0576
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: HCN_0577
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: HCN_0578
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: HCN_0579
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: HCN_0580
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: HCN_0581
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: HCN_0589
symbol: HCN_0589
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; A part of formate dehydrogenase alpha subunit; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: HCN_0592
symbol: fdhD
gene_biotype: protein_coding
description:
  Formate dehydrogenase accessory protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.


ensembl_gene_id: HCN_0595
symbol: HCN_0595
gene_biotype: protein_coding
description:
  Cytoplasmic pump protein of the hefABC efflux system HefC; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: HCN_0598
symbol: dgkA
gene_biotype: protein_coding
description:
  Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.


ensembl_gene_id: HCN_0606
symbol: napA
gene_biotype: protein_coding
description:
  Neutrophil-activating protein NapA; Starvation-inducible DNA-binding protein Dps; Belongs to the Dps family.


ensembl_gene_id: HCN_0607
symbol: ribB
gene_biotype: protein_coding
description:
  Bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.


ensembl_gene_id: HCN_0616
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: HCN_0619
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: HCN_0620
symbol: nuoJ
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: HCN_0621
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: HCN_0622
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: HCN_0626
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: HCN_0628
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: HCN_0631
symbol: prsA
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: HCN_0633
symbol: engA
gene_biotype: protein_coding
description:
  GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: HCN_0636
symbol: hisI
gene_biotype: protein_coding
description:
  Bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase; Histidine biosynthesis bifunctional protein hisIE; In the N-terminal section; belongs to the PRA-CH family.


ensembl_gene_id: HCN_0638
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: HCN_0648
symbol: gidB
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase GidB; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.


ensembl_gene_id: HCN_0649
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: HCN_0650
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent protein secretion pathway component TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: HCN_0651
symbol: tatB
gene_biotype: protein_coding
description:
  Putative Sec-independent protein secretion pathway component TatB; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.


ensembl_gene_id: HCN_0652
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: HCN_0655
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: HCN_0657
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: HCN_0659
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: HCN_0660
symbol: secG
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: HCN_0666
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: HCN_0670
symbol: tolB
gene_biotype: protein_coding
description:
  Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: HCN_0674
symbol: atpC
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: HCN_0675
symbol: atpD
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: HCN_0676
symbol: atpG
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: HCN_0677
symbol: atpA
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: HCN_0678
symbol: atpH
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: HCN_0679
symbol: atpF
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: HCN_0685
symbol: proB
gene_biotype: protein_coding
description:
  Gamma-glutamyl kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: HCN_0686
symbol: fcl
gene_biotype: protein_coding
description:
  GDP-fucose synthetase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.


ensembl_gene_id: HCN_0694
symbol: gmd
gene_biotype: protein_coding
description:
  GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.


ensembl_gene_id: HCN_0714
symbol: napD
gene_biotype: protein_coding
description:
  Periplasmic nitrate reductase component NapD; Chaperone for NapA, the catalytic subunit of the periplasmic nitrate reductase. It binds directly and specifically to the twin- arginine signal peptide of NapA, preventing premature interaction with the Tat translocase and premature export.


ensembl_gene_id: HCN_0716
symbol: napB
gene_biotype: protein_coding
description:
  Periplasmic nitrate reductase cytochrome c-type subunit NapB; Electron transfer subunit of the periplasmic nitrate reductase complex NapAB; Belongs to the NapB family.


ensembl_gene_id: HCN_0719
symbol: napA-2
gene_biotype: protein_coding
description:
  Periplasmic nitrate reductase large catalytic subunit NapA; Catalytic subunit of the periplasmic nitrate reductase complex NapAB. Receives electrons from NapB and catalyzes the reduction of nitrate to nitrite.


ensembl_gene_id: HCN_0721
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: HCN_0722
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: HCN_0725
symbol: coaX
gene_biotype: protein_coding
description:
  Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: HCN_0726
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase catalytic subunit; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: HCN_0729
symbol: HCN_0729
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Hydrolyzes 6-aminopenicillinic acid and 7- aminocephalosporanic acid (ACA) derivatives.


ensembl_gene_id: HCN_0742
symbol: ppiA
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: HCN_0746
symbol: purS
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase PurS; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assis [...]


ensembl_gene_id: HCN_0747
symbol: purQ
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase subunit I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to  [...]


ensembl_gene_id: HCN_0749
symbol: plsC
gene_biotype: protein_coding
description:
  1-acyl-glycerol-3-phosphate acyltransferase PlsC; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: HCN_0772
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: HCN_0774
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: HCN_0776
symbol: HCN_0776
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation.


ensembl_gene_id: HCN_0782
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: HCN_0783
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: HCN_0784
symbol: HCN_0784
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Belongs to the GHMP kinase family. IspE subfamily.


ensembl_gene_id: HCN_0785
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: HCN_0790
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: HCN_0791
symbol: yidC
gene_biotype: protein_coding
description:
  Putative inner membrane protein translocase component YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: HCN_0793
symbol: trmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase TrmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: HCN_0796
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: HCN_0797
symbol: flgB
gene_biotype: protein_coding
description:
  Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: HCN_0802
symbol: feoB
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: HCN_0810
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase subunit alpha; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: HCN_0811
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: HCN_0818
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: HCN_0822
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: HCN_0827
symbol: moaC
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: HCN_0832
symbol: moeA_1
gene_biotype: protein_coding
description:
  Molybdopterin biosynthesis protein MoeA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: HCN_0833
symbol: ribA
gene_biotype: protein_coding
description:
  GTP cyclohydrolase II; Catalyzes the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate; Belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: HCN_0835
symbol: icfA
gene_biotype: protein_coding
description:
  Carbonic anhydrase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.


ensembl_gene_id: HCN_0837
symbol: ribH
gene_biotype: protein_coding
description:
  Riboflavin synthase subunit beta; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: HCN_0838
symbol: nusB
gene_biotype: protein_coding
description:
  Transcription antitermination protein NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: HCN_0839
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP).


ensembl_gene_id: HCN_0840
symbol: panC
gene_biotype: protein_coding
description:
  Pantoate-beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: HCN_0852
symbol: dnaB
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: HCN_0854
symbol: HCN_0854
gene_biotype: protein_coding
description:
  UDP-glucose/GDP-mannose dehydrogenase; Polysaccharide biosynthesis protein; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: HCN_0859
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: HCN_0862
symbol: ubiA
gene_biotype: protein_coding
description:
  Prenyltransferase; 4-hydroxybenzoate polyprenyltransferase; Belongs to the UbiA prenyltransferase family.


ensembl_gene_id: HCN_0870
symbol: flaB
gene_biotype: protein_coding
description:
  Flagellin B; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: HCN_0871
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: HCN_0872
symbol: HCN_0872
gene_biotype: protein_coding
description:
  Histidinol-phosphatase; PHP family histidinol phosphatase/hydrolase; Belongs to the PHP hydrolase family. HisK subfamily.


ensembl_gene_id: HCN_0877
symbol: ubiE
gene_biotype: protein_coding
description:
  Ubiquinone/menaquinone biosynthesis methyltransferase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: HCN_0879
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: HCN_0883
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: HCN_0884
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]


ensembl_gene_id: HCN_0885
symbol: hemC
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: HCN_0887
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: HCN_0888
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: HCN_0892
symbol: acnB
gene_biotype: protein_coding
description:
  Bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Belongs to the aconitase/IPM isomerase family.


ensembl_gene_id: HCN_0896
symbol: nrdA
gene_biotype: protein_coding
description:
  Ribonucleotide-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: HCN_0899
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: HCN_0901
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: HCN_0902
symbol: lspA
gene_biotype: protein_coding
description:
  Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: HCN_0909
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: HCN_0910
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: HCN_0918
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: HCN_0920
symbol: tpx
gene_biotype: protein_coding
description:
  Thiol peroxidase; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. Tpx subfamily.


ensembl_gene_id: HCN_0925
symbol: ppsA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: HCN_0926
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase II; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist  [...]


ensembl_gene_id: HCN_0928
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine monophosphate synthase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: HCN_0931
symbol: bpt
gene_biotype: protein_coding
description:
  arginyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate. Belongs to the R-transferase family. Bpt subfamily.


ensembl_gene_id: HCN_0935
symbol: sodF
gene_biotype: protein_coding
description:
  Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: HCN_0938
symbol: HCN_0938
gene_biotype: protein_coding
description:
  Putative Ham1 family protein; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: HCN_0941
symbol: HCN_0941
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: HCN_0942
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: HCN_0943
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: HCN_0944
symbol: gcp
gene_biotype: protein_coding
description:
  O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: HCN_0947
symbol: xerD
gene_biotype: protein_coding
description:
  Integrase/recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Belongs to the 'phage' integrase family. XerH subfamily.


ensembl_gene_id: HCN_0951
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: HCN_0952
symbol: HCN_0952
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: HCN_0953
symbol: nnrD
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. In the C-terminal section; belongs to the NnrD/CARKD family.


ensembl_gene_id: HCN_0954
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: HCN_0955
symbol: cmoA
gene_biotype: protein_coding
description:
  Putative methyltransferase; Catalyzes the conversion of S-adenosyl-L-methionine (SAM) to carboxy-S-adenosyl-L-methionine (Cx-SAM).


ensembl_gene_id: HCN_0964
symbol: HCN_0964
gene_biotype: protein_coding
description:
  RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: HCN_0980
symbol: dapE
gene_biotype: protein_coding
description:
  Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.


ensembl_gene_id: HCN_0982
symbol: ligA
gene_biotype: protein_coding
description:
  NAD-dependent DNA ligase LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: HCN_0984
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: HCN_0985
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: HCN_0996
symbol: HCN_0996
gene_biotype: protein_coding
description:
  Phosphotyrosine protein phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: HCN_1008
symbol: HCN_1008
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: HCN_1009
symbol: rsmI
gene_biotype: protein_coding
description:
  Putative methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: HCN_1010
symbol: rpmE
gene_biotype: protein_coding
description:
  50S ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.


ensembl_gene_id: HCN_1025
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: HCN_1026
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: HCN_1032
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: HCN_1038
symbol: HCN_1038
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: HCN_1045
symbol: trpB-2
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: HCN_1046
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: HCN_1076
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine.


ensembl_gene_id: HCN_1077
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: HCN_1078
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family.


ensembl_gene_id: HCN_1084
symbol: purU
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).


ensembl_gene_id: HCN_1093
symbol: HCN_1093
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: HCN_1095
symbol: pgsA
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphate synthase; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: HCN_1096
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium and cobalt transporter; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: HCN_1100
symbol: HCN_1100
gene_biotype: protein_coding
description:
  Catalase-like protein; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.


ensembl_gene_id: HCN_1101
symbol: xseA-2
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: HCN_1114
symbol: trpC
gene_biotype: protein_coding
description:
  Bifunctional phosphoribosylanthranilate isomerase /indole-3-glycerol phosphate synthase; Belongs to the TrpF family.


ensembl_gene_id: HCN_1119
symbol: HCN_1119
gene_biotype: protein_coding
description:
  Putative amino acid ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: HCN_1123
symbol: obgE
gene_biotype: protein_coding
description:
  GTPase ObgE; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: HCN_1126
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: HCN_1136
symbol: HCN_1136
gene_biotype: protein_coding
description:
  Putative NAD dependent epimerase/dehydratase; Putative short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: HCN_1162
symbol: gidA
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: HCN_1179
symbol: HCN_1179
gene_biotype: protein_coding
description:
  Putative DNA-cytosine methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.


ensembl_gene_id: HCN_1188
symbol: HCN_1188
gene_biotype: protein_coding
description:
  dTDP-6-deoxy-D-xylo-hex-3-ulose aminase; DegT/DnrJ/EryC1/StrS aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: HCN_1192
symbol: HCN_1192
gene_biotype: protein_coding
description:
  dTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: HCN_1193
symbol: HCN_1193
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: HCN_1194
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: HCN_1216
symbol: HCN_1216
gene_biotype: protein_coding
description:
  Glutamate-1-semialdehyde 2,1-aminomutase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: HCN_1227
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: HCN_1235
symbol: ychF
gene_biotype: protein_coding
description:
  Translation-associated GTPase; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: HCN_1236
symbol: pepA
gene_biotype: protein_coding
description:
  Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: HCN_1238
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: HCN_1242
symbol: folD
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: HCN_1244
symbol: flaA_1
gene_biotype: protein_coding
description:
  Flagellin A; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: HCN_1249
symbol: secF
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: HCN_1250
symbol: secD
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: HCN_1251
symbol: yajC
gene_biotype: protein_coding
description:
  Preprotein translocase subunit YajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: HCN_1252
symbol: nhaA
gene_biotype: protein_coding
description:
  Sodium/proton antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.


ensembl_gene_id: HCN_1253
symbol: nhaA-2
gene_biotype: protein_coding
description:
  Putative sodium/proton antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.


ensembl_gene_id: HCN_1262
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: HCN_1269
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanyl-alanine synthetase A; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: HCN_1270
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: HCN_1271
symbol: serA
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: HCN_1274
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphatereductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: HCN_1275
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: HCN_1279
symbol: flgI
gene_biotype: protein_coding
description:
  Flagellar basal body P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: HCN_1282
symbol: nuoA-2
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain.


ensembl_gene_id: HCN_1302
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: HCN_1348
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette; Belongs to the CRISPR-associated endoribonucleas [...]


ensembl_gene_id: HCN_1349
symbol: cas1
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: HCN_1350
symbol: cas9
gene_biotype: protein_coding
description:
  CRISPR-associated protein Csn1; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). In type II CRISPR systems correct processing of pre-crRNA requires a trans- encoded small RNA (tracrRNA), endogenous ribonuclease 3 (rnc) and this protein. [...]


ensembl_gene_id: HCN_1427
symbol: HCN_1427
gene_biotype: protein_coding
description:
  Putative nucleobase:cation symporter; Putative type VI secretion-associated protein VC_A0119 family.


ensembl_gene_id: HCN_1430
symbol: HCN_1430
gene_biotype: protein_coding
description:
  Putative type IV/VI secretion system protein; Putative aspartyl/glutamyl-tRNA amidotransferase subunit B.


ensembl_gene_id: HCN_1483
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: HCN_1486
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: HCN_1488
symbol: HCN_1488
gene_biotype: protein_coding
description:
  SNF family sodium-dependent transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.


ensembl_gene_id: HCN_1496
symbol: hisH
gene_biotype: protein_coding
description:
  Glutamine amidotransferase HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: HCN_1498
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: HCN_1499
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: HCN_1503
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: HCN_1506
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: HCN_1513
symbol: fusA
gene_biotype: protein_coding
description:
  Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: HCN_1514
symbol: rpsG
gene_biotype: protein_coding
description:
  30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: HCN_1515
symbol: rpsL
gene_biotype: protein_coding
description:
  30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: HCN_1516
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta/beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: HCN_1517
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: HCN_1518
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: HCN_1519
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: HCN_1520
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: HCN_1521
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein NusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: HCN_1522
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family.


ensembl_gene_id: HCN_1524
symbol: tuf
gene_biotype: protein_coding
description:
  Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: HCN_1530
symbol: mutS
gene_biotype: protein_coding
description:
  Recombination and DNA strand exchange inhibitor protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: HCN_1536
symbol: accC
gene_biotype: protein_coding
description:
  Biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: HCN_1537
symbol: accB
gene_biotype: protein_coding
description:
  Biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: HCN_1542
symbol: flgD
gene_biotype: protein_coding
description:
  Flagellar basal body rod modification protein; Required for flagellar hook formation. May act as a scaffolding protein.


ensembl_gene_id: HCN_1554
symbol: trmL
gene_biotype: protein_coding
description:
  rRNA methylase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.


ensembl_gene_id: HCN_1555
symbol: HCN_1555
gene_biotype: protein_coding
description:
  Anaerobic C4-dicarboxylate transporter DcuA; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.


ensembl_gene_id: HCN_1559
symbol: prpB
gene_biotype: protein_coding
description:
  2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.


ensembl_gene_id: HCN_1564
symbol: HCN_1564
gene_biotype: protein_coding
description:
  Putative RND family efflux transporter MFP subunit CmeA; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: HCN_1565
symbol: ygaG
gene_biotype: protein_coding
description:
  S-ribosylhomocysteinase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family.


ensembl_gene_id: HCN_1568
symbol: argB
gene_biotype: protein_coding
description:
  Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: HCN_1571
symbol: pgpA
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphatase A; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).


ensembl_gene_id: HCN_1573
symbol: ispDF
gene_biotype: protein_coding
description:
  Bifunctional enzyme IspD/IspF; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF); Belongs to the IspF family.  In the N-terminal section; belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.


ensembl_gene_id: HCN_1574
symbol: thiC
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.


ensembl_gene_id: HCN_1580
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: HCN_1583
symbol: pabC
gene_biotype: protein_coding
description:
  Putative aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: HCN_1589
symbol: clpS
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease adaptor protein ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: HCN_1594
symbol: HCN_1594
gene_biotype: protein_coding
description:
  Short chain dehydrogenase/reductase family oxidoreductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: HCN_1597
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: HCN_1598
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: HCN_1601
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: HCN_1605
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: HCN_1607
symbol: murJ
gene_biotype: protein_coding
description:
  Virulence factor MviN; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: HCN_1612
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase catalytic subunit; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: HCN_1615
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: HCN_1653
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase MrsA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: HCN_1654
symbol: selA
gene_biotype: protein_coding
description:
  Selenocysteine synthase; Converts seryl-tRNA(Sec) to selenocysteinyl-tRNA(Sec) required for selenoprotein biosynthesis.


ensembl_gene_id: HCN_1657
symbol: moeA_2
gene_biotype: protein_coding
description:
  Molybdopterin biosynthesis enzyme; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: HCN_1668
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: HCN_1669
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: HCN_1671
symbol: ftsW_1
gene_biotype: protein_coding
description:
  Cell division membrane protein FtsW/MrdB/SpoVE; Rod shape-determining protein RodA; Belongs to the SEDS family.


ensembl_gene_id: HCN_1674
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: HCN_1679
symbol: fliD
gene_biotype: protein_coding
description:
  Flagellar capping protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: HCN_1683
symbol: gpsA
gene_biotype: protein_coding
description:
  NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: HCN_1685
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: HCN_1694
symbol: proA
gene_biotype: protein_coding
description:
  Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: HCN_1695
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: HCN_1696
symbol: hypA
gene_biotype: protein_coding
description:
  Hydrogenase nickel incorporation protein; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.


ensembl_gene_id: HCN_1698
symbol: lpxB
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: HCN_1705
symbol: HCN_1705
gene_biotype: protein_coding
description:
  Sodium- and chloride-dependent transporter; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.


ensembl_gene_id: HCN_1708
symbol: HCN_1708
gene_biotype: protein_coding
description:
  5-methyltetrahydropteroyltriglutamate- homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.


ensembl_gene_id: HCN_1709
symbol: pldA
gene_biotype: protein_coding
description:
  Phospholipase A; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family.


ensembl_gene_id: HCN_1711
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine-fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: HCN_1722
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: HCN_1724
symbol: pdxA
gene_biotype: protein_coding
description:
  4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).


ensembl_gene_id: HCN_1725
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: HCN_1744
symbol: ftsH_1
gene_biotype: protein_coding
description:
  Cell division protease FtsH; ATP-dependent zinc metalloproteinase; Belongs to the AAA ATPase family.


ensembl_gene_id: HCN_1747
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: HCN_1749
symbol: mqnA
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: HCN_1777
symbol: flgH
gene_biotype: protein_coding
description:
  Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: HCN_1781
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: HCN_1792
symbol: HCN_1792
gene_biotype: protein_coding
description:
  Type II 5-cytosoine methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.


ensembl_gene_id: HCN_1796
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: HCN_1807
symbol: HCN_1807
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.


ensembl_gene_id: HCN_1809
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: HCN_1812
symbol: plsX
gene_biotype: protein_coding
description:
  Putative glycerol-3-phosphate acyltransferase PlsX; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: HCN_1813
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-(acyl carrier protein) synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: HCN_1824
symbol: frdB
gene_biotype: protein_coding
description:
  Fumarate reductase iron-sulfur subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family.


ensembl_gene_id: HCN_1828
symbol: argJ
gene_biotype: protein_coding
description:
  Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: HCN_1837
symbol: HCN_1837
gene_biotype: protein_coding
description:
  5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.


ensembl_gene_id: HCN_1840
symbol: mraW
gene_biotype: protein_coding
description:
  S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: HCN_1845
symbol: miaB
gene_biotype: protein_coding
description:
  2-methylthioadenine synthetase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: HCN_1847
symbol: bisC
gene_biotype: protein_coding
description:
  Biotin sulfoxide reductase BisC; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: HCN_1851
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: HCN_1853
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA-specific 2-thiouridylase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: HCN_1862
symbol: tatA
gene_biotype: protein_coding
description:
  Putative Sec-independent protein translocase; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: HCN_1866
symbol: fldA
gene_biotype: protein_coding
description:
  Flavodoxin FldA; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family.


ensembl_gene_id: HCN_1871
symbol: yaeC
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; NLPA family lipoprotein; Belongs to the nlpA lipoprotein family.


ensembl_gene_id: HCN_1874
symbol: metN
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: HCN_1877
symbol: dapD
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase DapD; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA.


ensembl_gene_id: HCN_1883
symbol: argD
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: HCN_1889
symbol: nadK
gene_biotype: protein_coding
description:
  NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: HCN_1895
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: HCN_1898
symbol: rimO
gene_biotype: protein_coding
description:
  MiaB-like tRNA modifying enzyme; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: HCN_1901
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: HCN_1903
symbol: HCN_1903
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; A part of type III restriction/modification system modification methylase.


ensembl_gene_id: HCN_1948
symbol: HCN_1948
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Similar to relaxase/mobilization nuclease domain-containing protein.


ensembl_gene_id: HCN_1951
symbol: crcB
gene_biotype: protein_coding
description:
  Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: HCN_1957
symbol: rlpA
gene_biotype: protein_coding
description:
  Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: HCN_1962
symbol: engB
gene_biotype: protein_coding
description:
  GTPase EngB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: HCN_1968
symbol: dfp
gene_biotype: protein_coding
description:
  Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: HCN_1971
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: HCN_1977
symbol: fixP
gene_biotype: protein_coding
description:
  Cb-type cytochrome C oxidase subunit III; C-type cytochrome. Part of the cbb3-type cytochrome c oxidase complex.


ensembl_gene_id: HCN_1981
symbol: tilS
gene_biotype: protein_coding
description:
  Putative tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: HCN_1987
symbol: HCN_1987
gene_biotype: protein_coding
description:
  Glutathione-regulated potassium-efflux system protein KefB; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: HCN_1988
symbol: ung
gene_biotype: protein_coding
description:
  uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: HCN_1989
symbol: gatC
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: HCN_1990
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate 5-dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: HCN_2000
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: HCN_2001
symbol: rlmH
gene_biotype: protein_coding
description:
  rRNA large subunit methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: HCN_2005
symbol: speA
gene_biotype: protein_coding
description:
  Arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.


ensembl_gene_id: HCN_2006
symbol: ybeY
gene_biotype: protein_coding
description:
  Putative metalloprotease; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: HCN_2008
symbol: HCN_2008
gene_biotype: protein_coding
description:
  Holliday junction resolvase-like protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: HCN_2011
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: HCN_2036
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: HCN_2037
symbol: ppc
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle.


ensembl_gene_id: HCN_2040
symbol: groEL
gene_biotype: protein_coding
description:
  Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: HCN_2041
symbol: groES
gene_biotype: protein_coding
description:
  Co-chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: HCN_2043
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase DnaG; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: HCN_2051
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: HCN_2057
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: HCN_2058
symbol: lpxA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: HCN_2059
symbol: fabZ
gene_biotype: protein_coding
description:
  (3R)-hydroxymyristoyl-ACP dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: HCN_2060
symbol: queH
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: HCN_2061
symbol: rlmN
gene_biotype: protein_coding
description:
  Radical SAM domain-containing protein; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: HCN_2063
symbol: hisF
gene_biotype: protein_coding
description:
  Cyclase HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: HCN_2064
symbol: ksgA
gene_biotype: protein_coding
description:
  Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: HCN_2065
symbol: rnj
gene_biotype: protein_coding
description:
  Putative metallo-beta-lactamase family protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: HCN_2066
symbol: HCN_2066
gene_biotype: protein_coding
description:
  Arabinose 5-phosphate isomerase; Polysialic acid capsule expression protein; Belongs to the SIS family. GutQ/KpsF subfamily.


ensembl_gene_id: HCN_2070
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.


ensembl_gene_id: HCN_2072
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: HCN_2073
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.


ensembl_gene_id: HCN_2074
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: HCN_2080
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: HCN_2081
symbol: dnaN
gene_biotype: protein_coding
description:
  DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of  [...]


ensembl_gene_id: HCN_2087
symbol: thyX
gene_biotype: protein_coding
description:
  FAD-dependent thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: HCN_2096
symbol: ruvC
gene_biotype: protein_coding
description:
  Holliday junction resolvase; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


# pathwayInfo

id: CL:1020
description: Asparagine metabolic process, and De novo AMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1020_Asparagine_metabolic_process,_and_De_novo_AMP_biosynthetic_process


id: CL:1032
description: Mixed, incl. Vitamin metabolic process, and Terpenoid backbone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1032_Mixed,_incl._Vitamin_metabolic_process,_and_Terpenoid_backbone_biosynthesis


id: CL:1033
description: Mixed, incl. Terpenoid backbone biosynthesis, and Pyridine nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1033_Mixed,_incl._Terpenoid_backbone_biosynthesis,_and_Pyridine_nucleotide_biosynthetic_process


id: CL:1034
description: Pyridine nucleotide biosynthetic process, and Cellular modified amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1034_Pyridine_nucleotide_biosynthetic_process,_and_Cellular_modified_amino_acid_metabolic_process


id: CL:1035
description: Cellular modified amino acid metabolic process, and Riboflavin metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1035_Cellular_modified_amino_acid_metabolic_process,_and_Riboflavin_metabolism


id: CL:1053
description: Pantothenate metabolic process, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1053_Pantothenate_metabolic_process,_and_Coenzyme_A_biosynthesis


id: CL:1064
description: Pyridine nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1064_Pyridine_nucleotide_biosynthetic_process


id: CL:1077
description: Terpenoid backbone biosynthesis, and Host cell
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1077_Terpenoid_backbone_biosynthesis,_and_Host_cell


id: CL:1100
description: DNA catabolic process, and 2Fe-2S
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1100_DNA_catabolic_process,_and_2Fe-2S


id: CL:1111
description: Mixed, incl. Carbon metabolism, and Fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1111_Mixed,_incl._Carbon_metabolism,_and_Fatty_acid_metabolic_process


id: CL:1112
description: Mixed, incl. Ubiquinone, and Fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1112_Mixed,_incl._Ubiquinone,_and_Fatty_acid_metabolic_process


id: CL:1113
description: Mixed, incl. Ubiquinone, and Phosphopantetheine attachment site
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1113_Mixed,_incl._Ubiquinone,_and_Phosphopantetheine_attachment_site


id: CL:1115
description: Ubiquinone, and Peptidase M16 inactive domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1115_Ubiquinone,_and_Peptidase_M16_inactive_domain


id: CL:1118
description: Ubiquinone, and Peptidase M16 inactive domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1118_Ubiquinone,_and_Peptidase_M16_inactive_domain


id: CL:113
description: Mixed, incl. Large ribosomal subunit, and KOW (Kyprides, Ouzounis, Woese) motif.
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:113_Mixed,_incl._Large_ribosomal_subunit,_and_KOW_(Kyprides,_Ouzounis,_Woese)_motif.


id: CL:1152
description: Peptidase M16 inactive domain, and 4Fe-4S ferredoxin-type, iron-sulphur binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1152_Peptidase_M16_inactive_domain,_and_4Fe-4S_ferredoxin-type,_iron-sulphur_binding_domain


id: CL:1172
description: Mixed, incl. Phosphopantetheine, and Alginic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1172_Mixed,_incl._Phosphopantetheine,_and_Alginic_acid_metabolic_process


id: CL:1182
description: Mixed, incl. Fatty acid metabolism, and Sulfuric ester hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1182_Mixed,_incl._Fatty_acid_metabolism,_and_Sulfuric_ester_hydrolase_activity


id: CL:1183
description: Fatty acid metabolism, and ANK repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1183_Fatty_acid_metabolism,_and_ANK_repeat


id: CL:1188
description: 3-oxoacyl-[acyl-carrier-protein] synthase activity, and Fatty acid synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1188_3-oxoacyl-[acyl-carrier-protein]_synthase_activity,_and_Fatty_acid_synthase_activity


id: CL:1217
description: Mixed, incl. ANK repeat, and DHHA1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1217_Mixed,_incl._ANK_repeat,_and_DHHA1_domain


id: CL:1228
description: Mostly uncharacterized, incl. Fatty acid degradation, and Cell redox homeostasis
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1228_Mostly_uncharacterized,_incl._Fatty_acid_degradation,_and_Cell_redox_homeostasis


id: CL:1231
description: Mixed, incl. Fatty acid degradation, and Acid-thiol ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1231_Mixed,_incl._Fatty_acid_degradation,_and_Acid-thiol_ligase_activity


id: CL:1250
description: Citrate cycle (TCA cycle), and Propanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1250_Citrate_cycle_(TCA_cycle),_and_Propanoate_metabolism


id: CL:1251
description: Pyruvate metabolism, and Tricarboxylic acid cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1251_Pyruvate_metabolism,_and_Tricarboxylic_acid_cycle


id: CL:1254
description: Malate dehydrogenase activity, and HMGL-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1254_Malate_dehydrogenase_activity,_and_HMGL-like


id: CL:1276
description: acyl-CoA biosynthetic process, and Biotin-requiring enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1276_acyl-CoA_biosynthetic_process,_and_Biotin-requiring_enzyme


id: CL:1297
description: Fumarate hydratase activity, and Butanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1297_Fumarate_hydratase_activity,_and_Butanoate_metabolism


id: CL:1318
description: Pentose phosphate pathway, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1318_Pentose_phosphate_pathway,_and_Glycolysis


id: CL:1319
description: Glycolytic process, and Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1319_Glycolytic_process,_and_Glyceraldehyde_3-phosphate_dehydrogenase,_C-terminal_domain


id: CL:1321
description: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain, and Glycolytic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1321_Glyceraldehyde_3-phosphate_dehydrogenase,_C-terminal_domain,_and_Glycolytic_process


id: CL:1354
description: Mixed, incl. Dephosphorylation, and Cation channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1354_Mixed,_incl._Dephosphorylation,_and_Cation_channel_activity


id: CL:1363
description: Mixed, incl. Phospholipid metabolism, and Response to pH
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1363_Mixed,_incl._Phospholipid_metabolism,_and_Response_to_pH


id: CL:1366
description: Glycerolipid metabolic process, and CDP-alcohol phosphatidyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1366_Glycerolipid_metabolic_process,_and_CDP-alcohol_phosphatidyltransferase


id: CL:1385
description: Mixed, incl. Response to pH, and Transition metal ion transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1385_Mixed,_incl._Response_to_pH,_and_Transition_metal_ion_transmembrane_transporter_activity


id: CL:139
description: Mixed, incl. Large ribosomal subunit rRNA binding, and Elongation factor Tu GTP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:139_Mixed,_incl._Large_ribosomal_subunit_rRNA_binding,_and_Elongation_factor_Tu_GTP_binding_domain


id: CL:1424
description: Lipopolysaccharide biosynthesis, and Cyclo-ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1424_Lipopolysaccharide_biosynthesis,_and_Cyclo-ligase_activity


id: CL:1425
description: Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1425_Lipopolysaccharide_biosynthesis


id: CL:1427
description: Lipid A biosynthesis, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1427_Lipid_A_biosynthesis,_and_Lipopolysaccharide_biosynthesis


id: CL:1429
description: Lipopolysaccharide biosynthesis, and Haloacid dehalogenase-like hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1429_Lipopolysaccharide_biosynthesis,_and_Haloacid_dehalogenase-like_hydrolase


id: CL:1455
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1455_Carbohydrate_metabolism,_and_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives

description:
  Carbohydrate metabolism, and Racemase and epimerase activity, acting on carbohydrates and derivatives


id: CL:1470
description: Mixed, incl. Cyclo-ligase activity, and Regulation of DNA-templated transcription, elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1470_Mixed,_incl._Cyclo-ligase_activity,_and_Regulation_of_DNA-templated_transcription,_elongation


id: CL:1484
description: Small Multidrug Resistance protein, and Lipoprotein metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1484_Small_Multidrug_Resistance_protein,_and_Lipoprotein_metabolic_process


id: CL:1499
description: Mixed, incl. Base excision repair, and TrkA-N domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1499_Mixed,_incl._Base_excision_repair,_and_TrkA-N_domain


id: CL:1501
description: DNA N-glycosylase activity, and NAD metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1501_DNA_N-glycosylase_activity,_and_NAD_metabolic_process


id: CL:1529
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Lipopolysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1529_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Lipopolysaccharide_transport


id: CL:153
description: Mixed, incl. Ribosomal protein S5 domain 2-type fold, and Small ribosomal subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:153_Mixed,_incl._Ribosomal_protein_S5_domain_2-type_fold,_and_Small_ribosomal_subunit


id: CL:1531
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Regulation of cell death
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1531_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Regulation_of_cell_death


id: CL:1533
description: O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1533_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:1555
description: Mixed, incl. Lipopolysaccharide transport, and Ferric iron binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1555_Mixed,_incl._Lipopolysaccharide_transport,_and_Ferric_iron_binding


id: CL:1557
description: Mixed, incl. Lipopolysaccharide transport, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1557_Mixed,_incl._Lipopolysaccharide_transport,_and_Acetyltransferase_(GNAT)_domain


id: CL:1578
description: Mixed, incl. Queuosine metabolic process, and TAT protein transport complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1578_Mixed,_incl._Queuosine_metabolic_process,_and_TAT_protein_transport_complex


id: CL:1579
description: Mixed, incl. Queuosine biosynthesis, and TAT protein transport complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1579_Mixed,_incl._Queuosine_biosynthesis,_and_TAT_protein_transport_complex


id: CL:1581
description: TAT protein transport complex, and Integral component of membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1581_TAT_protein_transport_complex,_and_Integral_component_of_membrane


id: CL:1602
description: Mixed, incl. Queuine tRNA-ribosyltransferase, and Elongation factor G C-terminus
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1602_Mixed,_incl._Queuine_tRNA-ribosyltransferase,_and_Elongation_factor_G_C-terminus


id: CL:1628
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1628_Mixed,_incl._Cysteine_and_methionine_metabolism,_and_Pteridine-containing_compound_metabolic_process

description:
  Mixed, incl. Cysteine and methionine metabolism, and Pteridine-containing compound metabolic process


id: CL:1629
description: Mixed, incl. Cysteine and methionine metabolism, and GTP cyclohydrolase I activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1629_Mixed,_incl._Cysteine_and_methionine_metabolism,_and_GTP_cyclohydrolase_I_activity


id: CL:1631
description: C-5 methylation of cytosine, and One-carbon metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1631_C-5_methylation_of_cytosine,_and_One-carbon_metabolic_process


id: CL:1647
description: Mixed, incl. Homoserine metabolic process, and GTP cyclohydrolase I activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1647_Mixed,_incl._Homoserine_metabolic_process,_and_GTP_cyclohydrolase_I_activity


id: CL:1658
description: Mostly uncharacterized, incl. Phosphorylase superfamily, and Carbon-sulfur lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1658_Mostly_uncharacterized,_incl._Phosphorylase_superfamily,_and_Carbon-sulfur_lyase_activity


id: CL:166
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:166_Structural_constituent_of_ribosome


id: CL:1660
description: Mixed, incl. rRNA (cytosine) methyltransferase activity, and Cell projection assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1660_Mixed,_incl._rRNA_(cytosine)_methyltransferase_activity,_and_Cell_projection_assembly


id: CL:1672
description: Mixed, incl. Phosphorylase superfamily, and Carbon-sulfur lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1672_Mixed,_incl._Phosphorylase_superfamily,_and_Carbon-sulfur_lyase_activity


id: CL:1681
description: Mostly uncharacterized, incl. Rescue of stalled ribosome, and TM2 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1681_Mostly_uncharacterized,_incl._Rescue_of_stalled_ribosome,_and_TM2_domain


id: CL:1683
description: Mixed, incl. Rescue of stalled ribosome, and TM2 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1683_Mixed,_incl._Rescue_of_stalled_ribosome,_and_TM2_domain


id: CL:169
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:169_Structural_constituent_of_ribosome


id: CL:1704
description: Mixed, incl. Prosthetic group metabolic process, and Electron transport chain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1704_Mixed,_incl._Prosthetic_group_metabolic_process,_and_Electron_transport_chain


id: CL:1705
description: Mixed, incl. Electron transport chain, and Organic anion transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1705_Mixed,_incl._Electron_transport_chain,_and_Organic_anion_transmembrane_transporter_activity


id: CL:1707
description: Mixed, incl. Nitrogen metabolism, and C4-dicarboxylate transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1707_Mixed,_incl._Nitrogen_metabolism,_and_C4-dicarboxylate_transmembrane_transporter_activity


id: CL:1708
description: Mixed, incl. Nitrogen metabolism, and Molybdopterin oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1708_Mixed,_incl._Nitrogen_metabolism,_and_Molybdopterin_oxidoreductase


id: CL:1710
description: Mixed, incl. Nitrogen metabolism, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1710_Mixed,_incl._Nitrogen_metabolism,_and_4Fe-4S_binding_domain


id: CL:1713
description: Periplasm, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1713_Periplasm,_and_4Fe-4S_binding_domain


id: CL:1735
description: Nitrate assimilation, and Prokaryotic cytochrome b561
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1735_Nitrate_assimilation,_and_Prokaryotic_cytochrome_b561


id: CL:1749
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1749_Mixed,_incl._C4-dicarboxylate_transmembrane_transporter_activity,_and_tRNA_wobble_uridine_modification

description:
  Mixed, incl. C4-dicarboxylate transmembrane transporter activity, and tRNA wobble uridine modification


id: CL:1769
description: Mixed, incl. Heme, and Dynamin family
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1769_Mixed,_incl._Heme,_and_Dynamin_family


id: CL:1771
description: Mixed, incl. Respiratory chain, and PP-loop family
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1771_Mixed,_incl._Respiratory_chain,_and_PP-loop_family


id: CL:1773
description: Mixed, incl. Respiratory chain, and PP-loop family
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1773_Mixed,_incl._Respiratory_chain,_and_PP-loop_family


id: CL:1777
description: Respiratory chain, and Heme binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1777_Respiratory_chain,_and_Heme_binding


id: CL:1806
description: Dynamin family, and Aerobic electron transport chain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1806_Dynamin_family,_and_Aerobic_electron_transport_chain


id: CL:1819
description: Mixed, incl. Prosthetic group metabolic process, and Selenocompound metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1819_Mixed,_incl._Prosthetic_group_metabolic_process,_and_Selenocompound_metabolism


id: CL:1820
description: Prosthetic group metabolic process, and Transcription antitermination
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1820_Prosthetic_group_metabolic_process,_and_Transcription_antitermination


id: CL:1822
description: Prosthetic group metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1822_Prosthetic_group_metabolic_process


id: CL:1824
description: Probable molybdopterin binding domain, and MobA-like NTP transferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1824_Probable_molybdopterin_binding_domain,_and_MobA-like_NTP_transferase_domain


id: CL:1853
description: Mixed, incl. Selenocompound metabolism, and tRNA thio-modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1853_Mixed,_incl._Selenocompound_metabolism,_and_tRNA_thio-modification


id: CL:1873
description: Mixed, incl. Cilium, and Signal transduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1873_Mixed,_incl._Cilium,_and_Signal_transduction


id: CL:1874
description: Mixed, incl. Cilium, and Signal transduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1874_Mixed,_incl._Cilium,_and_Signal_transduction


id: CL:1875
description: Cilium, and Signal transduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1875_Cilium,_and_Signal_transduction


id: CL:1877
description: Cilium, and Signal transduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1877_Cilium,_and_Signal_transduction


id: CL:1879
description: Cilium, and Signal transduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1879_Cilium,_and_Signal_transduction


id: CL:1881
description: Cilium, and Signal transduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1881_Cilium,_and_Signal_transduction


id: CL:1882
description: Cilium, and Bacterial chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1882_Cilium,_and_Bacterial_chemotaxis


id: CL:1888
description: Bacterial-type flagellum basal body, and Bacterial flagellum protein export
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1888_Bacterial-type_flagellum_basal_body,_and_Bacterial_flagellum_protein_export


id: CL:1891
description: Cytoskeletal motor activity, and Protein secretion by the type III secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1891_Cytoskeletal_motor_activity,_and_Protein_secretion_by_the_type_III_secretion_system


id: CL:1904
description: Bacterial flagellum protein export, and Bacterial-type flagellum assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1904_Bacterial_flagellum_protein_export,_and_Bacterial-type_flagellum_assembly


id: CL:1914
description: Bacterial-type flagellum basal body, rod, and Flagella basal body rod protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1914_Bacterial-type_flagellum_basal_body,_rod,_and_Flagella_basal_body_rod_protein


id: CL:1942
description: Bacterial-type flagellum hook, and Bacterial flagellin N-terminal helical region
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1942_Bacterial-type_flagellum_hook,_and_Bacterial_flagellin_N-terminal_helical_region


id: CL:1964
description: Bacterial chemotaxis, and Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1964_Bacterial_chemotaxis,_and_Methyl-accepting_chemotaxis-like_domains_(chemotaxis_sensory_transducer).


id: CL:1971
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1971_Two_component_signalling_adaptor_domain,_and_HAMP_(Histidine_kinases,_Adenylyl_cyclases,_Methyl_binding_proteins,_Phosphatases)_domain

description:
  Two component signalling adaptor domain, and HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain


id: CL:1973
description: Two component signalling adaptor domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:1973_Two_component_signalling_adaptor_domain


id: CL:2009
description: Transmembrane signaling receptor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2009_Transmembrane_signaling_receptor_activity


id: CL:2024
description: Mixed, incl. Sigma factor, and HNH nucleases
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2024_Mixed,_incl._Sigma_factor,_and_HNH_nucleases


id: CL:2043
description: Mixed, incl. Thioesterase superfamily, and Acid-amino acid ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2043_Mixed,_incl._Thioesterase_superfamily,_and_Acid-amino_acid_ligase_activity


id: CL:2063
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2063_Mixed,_incl._DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity,_and_Response_to_host

description:
  Mixed, incl. DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity, and Response to host


id: CL:2066
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2066_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: CL:2086
description: Mixed, incl. MORN repeat variant, and Bacterial SH3 domain homologues
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2086_Mixed,_incl._MORN_repeat_variant,_and_Bacterial_SH3_domain_homologues


id: CL:2088
description: Mixed, incl. MORN repeat variant, and Transglycosylase SLT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2088_Mixed,_incl._MORN_repeat_variant,_and_Transglycosylase_SLT_domain


id: CL:2109
description: Mixed, incl. Glycosyl transferase family 2, and Xenobiotic transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2109_Mixed,_incl._Glycosyl_transferase_family_2,_and_Xenobiotic_transmembrane_transporter_activity


id: CL:2111
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2111_Mixed,_incl._Terpenoid_metabolic_process,_and_Methyl-accepting_chemotaxis-like_domains_(chemotaxis_sensory_transducer).

description:
  Mixed, incl. Terpenoid metabolic process, and Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).


id: CL:2128
description: Mostly uncharacterized, incl. Heavy-metal-associated domain, and Flavodoxin-like fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2128_Mostly_uncharacterized,_incl._Heavy-metal-associated_domain,_and_Flavodoxin-like_fold


id: CL:2129
description: Mixed, incl. Heavy-metal-associated domain, and Lipid degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2129_Mixed,_incl._Heavy-metal-associated_domain,_and_Lipid_degradation


id: CL:2130
description: Mixed, incl. Heavy-metal-associated domain, and Glycerophospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2130_Mixed,_incl._Heavy-metal-associated_domain,_and_Glycerophospholipid_metabolism


id: CL:2132
description: Heavy-metal-associated domain, and Copper ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2132_Heavy-metal-associated_domain,_and_Copper_ion_transport


id: CL:2156
description: Mixed, incl. rRNA (cytosine) methyltransferase activity, and Aminotransferase class I and II
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2156_Mixed,_incl._rRNA_(cytosine)_methyltransferase_activity,_and_Aminotransferase_class_I_and_II


id: CL:2174
description: Mixed, incl. Flavodoxin-like fold, and TrkA-N domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2174_Mixed,_incl._Flavodoxin-like_fold,_and_TrkA-N_domain


id: CL:2191
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2191_Mixed,_incl._Tetrapyrrole_metabolic_process,_and_Ubiquinone_and_other_terpenoid-quinone_biosynthesis

description:
  Mixed, incl. Tetrapyrrole metabolic process, and Ubiquinone and other terpenoid-quinone biosynthesis


id: CL:2192
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2192_Mixed,_incl._Tetrapyrrole_metabolic_process,_and_Ubiquinone_and_other_terpenoid-quinone_biosynthesis

description:
  Mixed, incl. Tetrapyrrole metabolic process, and Ubiquinone and other terpenoid-quinone biosynthesis


id: CL:2193
description: Ubiquinone and other terpenoid-quinone biosynthesis, and Thiamine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2193_Ubiquinone_and_other_terpenoid-quinone_biosynthesis,_and_Thiamine_metabolic_process


id: CL:2194
description: Thiamine metabolic process, and Ubiquinone and other terpenoid-quinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2194_Thiamine_metabolic_process,_and_Ubiquinone_and_other_terpenoid-quinone_biosynthesis


id: CL:2196
description: Ubiquinone and other terpenoid-quinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2196_Ubiquinone_and_other_terpenoid-quinone_biosynthesis


id: CL:2220
description: Mixed, incl. Ubiquitin-dependent protein catabolic process, and Transglycosylase SLT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2220_Mixed,_incl._Ubiquitin-dependent_protein_catabolic_process,_and_Transglycosylase_SLT_domain


id: CL:2234
description: Heme metabolic process, and META domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2234_Heme_metabolic_process,_and_META_domain


id: CL:2236
description: Protoporphyrinogen IX metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2236_Protoporphyrinogen_IX_metabolic_process


id: CL:2256
description: Mixed, incl. META domain, and Regulation of translational initiation
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2256_Mixed,_incl._META_domain,_and_Regulation_of_translational_initiation


id: CL:2268
description: Mixed, incl. Helicase, and Na+/H+ antiporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2268_Mixed,_incl._Helicase,_and_Na+/H+_antiporter_family


id: CL:2282
description: Mixed, incl. Phosphorelay signal transduction system, and Tricarboxylic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2282_Mixed,_incl._Phosphorelay_signal_transduction_system,_and_Tricarboxylic_acid_metabolic_process


id: CL:2284
description: Mixed, incl. Tricarboxylic acid metabolic process, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2284_Mixed,_incl._Tricarboxylic_acid_metabolic_process,_and_Methyltransferase_domain


id: CL:2286
description: Mixed, incl. Tricarboxylic acid metabolic process, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2286_Mixed,_incl._Tricarboxylic_acid_metabolic_process,_and_Methyltransferase_domain


id: CL:2287
description: Radical SAM superfamily, and Iron-sulfur cluster-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2287_Radical_SAM_superfamily,_and_Iron-sulfur_cluster-binding_domain


id: CL:2289
description: Pyrroloquinoline quinone biosynthetic process, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2289_Pyrroloquinoline_quinone_biosynthetic_process,_and_Methyltransferase_domain


id: CL:2308
description: Mixed, incl. Methyltransferase domain, and Methionine biosynthesis protein MetW
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2308_Mixed,_incl._Methyltransferase_domain,_and_Methionine_biosynthesis_protein_MetW


id: CL:2334
description: Mixed, incl. Phosphorelay signal transduction system, and PP-loop family
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2334_Mixed,_incl._Phosphorelay_signal_transduction_system,_and_PP-loop_family


id: CL:2335
description: Mixed, incl. Phosphorelay signal transduction system, and PP-loop family
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2335_Mixed,_incl._Phosphorelay_signal_transduction_system,_and_PP-loop_family


id: CL:2338
description: Mixed, incl. Major Facilitator Superfamily, and Transmembrane helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2338_Mixed,_incl._Major_Facilitator_Superfamily,_and_Transmembrane_helix


id: CL:2353
description: Two-component regulatory system, and His Kinase A (phosphoacceptor) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2353_Two-component_regulatory_system,_and_His_Kinase_A_(phosphoacceptor)_domain


id: CL:2370
description: Protein histidine kinase activity, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2370_Protein_histidine_kinase_activity,_and_Coiled_coil


id: CL:2381
description: Mixed, incl. Pantothenate and CoA biosynthesis, and RNA methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2381_Mixed,_incl._Pantothenate_and_CoA_biosynthesis,_and_RNA_methylation


id: CL:2383
description: Mixed, incl. Clp protease, and Deaminase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2383_Mixed,_incl._Clp_protease,_and_Deaminase_activity


id: CL:2397
description: Mixed, incl. Coenzyme A biosynthesis, and rRNA methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2397_Mixed,_incl._Coenzyme_A_biosynthesis,_and_rRNA_methylation


id: CL:2408
description: Mixed, incl. Amino sugar and nucleotide sugar metabolism, and Transferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2408_Mixed,_incl._Amino_sugar_and_nucleotide_sugar_metabolism,_and_Transferase_activity


id: CL:2409
description: Mixed, incl. Amino sugar and nucleotide sugar metabolism, and Transferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2409_Mixed,_incl._Amino_sugar_and_nucleotide_sugar_metabolism,_and_Transferase_activity


id: CL:2410
description: Amino sugar and nucleotide sugar metabolism, and Transferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2410_Amino_sugar_and_nucleotide_sugar_metabolism,_and_Transferase_activity


id: CL:2411
description: Amino sugar and nucleotide sugar metabolism, and Transferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2411_Amino_sugar_and_nucleotide_sugar_metabolism,_and_Transferase_activity


id: CL:2412
description: Mixed, incl. Amino sugar and nucleotide sugar metabolism, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2412_Mixed,_incl._Amino_sugar_and_nucleotide_sugar_metabolism,_and_Polysaccharide_biosynthetic_process


id: CL:2413
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Protein glycosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2413_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Protein_glycosylation


id: CL:2414
description: Mixed, incl. Galactose metabolism, and Glycosyltransferase like family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2414_Mixed,_incl._Galactose_metabolism,_and_Glycosyltransferase_like_family_2


id: CL:2415
description: Mixed, incl. Galactose metabolism, and Protein N-linked glycosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2415_Mixed,_incl._Galactose_metabolism,_and_Protein_N-linked_glycosylation


id: CL:2417
description: Galactose metabolism, and NAD+ binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2417_Galactose_metabolism,_and_NAD+_binding


id: CL:2432
description: Protein N-linked glycosylation, and Phosphoglucomutase/phosphomannomutase, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2432_Protein_N-linked_glycosylation,_and_Phosphoglucomutase/phosphomannomutase,_C-terminal_domain


id: CL:2444
description: Mixed, incl. Glycosyltransferase like family 2, and Galactose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2444_Mixed,_incl._Glycosyltransferase_like_family_2,_and_Galactose_metabolism


id: CL:2455
description: Mixed, incl. Polyketide sugar unit biosynthesis, and Tellurite resistance protein TehB
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2455_Mixed,_incl._Polyketide_sugar_unit_biosynthesis,_and_Tellurite_resistance_protein_TehB


id: CL:2457
description: Mixed, incl. Polyketide sugar unit biosynthesis, and Hexapeptide repeat of succinyl-transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2457_Mixed,_incl._Polyketide_sugar_unit_biosynthesis,_and_Hexapeptide_repeat_of_succinyl-transferase


id: CL:2478
description: Mixed, incl. Nucleotide-sugar metabolic process, and AMP-binding enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2478_Mixed,_incl._Nucleotide-sugar_metabolic_process,_and_AMP-binding_enzyme


id: CL:2479
description: Mixed, incl. Nucleotide-sugar metabolic process, and AMP-binding enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2479_Mixed,_incl._Nucleotide-sugar_metabolic_process,_and_AMP-binding_enzyme


id: CL:2480
description: Mixed, incl. Nucleotide-sugar metabolic process, and NeuB family
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2480_Mixed,_incl._Nucleotide-sugar_metabolic_process,_and_NeuB_family


id: CL:2482
description: Mixed, incl. UDP-N-acetylglucosamine 2-epimerase, and NeuB family
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2482_Mixed,_incl._UDP-N-acetylglucosamine_2-epimerase,_and_NeuB_family


id: CL:2501
description: Mixed, incl. AMP-binding enzyme, and Phenol-containing compound metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2501_Mixed,_incl._AMP-binding_enzyme,_and_Phenol-containing_compound_metabolic_process


id: CL:2516
description: Mixed, incl. Methyltransferase FkbM domain, and Response to antibiotic
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2516_Mixed,_incl._Methyltransferase_FkbM_domain,_and_Response_to_antibiotic


id: CL:2519
description: Response to antibiotic, and KR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2519_Response_to_antibiotic,_and_KR_domain


id: CL:253
description: aminoacyl-tRNA editing activity, and Putative tRNA binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:253_aminoacyl-tRNA_editing_activity,_and_Putative_tRNA_binding_domain


id: CL:2534
description: Mixed, incl. Regulation of single-species biofilm formation, and AMP-binding enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2534_Mixed,_incl._Regulation_of_single-species_biofilm_formation,_and_AMP-binding_enzyme


id: CL:2543
description: Mixed, incl. Cytidylyltransferase, and Ubiquinone biosynthesis complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2543_Mixed,_incl._Cytidylyltransferase,_and_Ubiquinone_biosynthesis_complex


id: CL:2545
description: Mixed, incl. Cytidylyltransferase, and Ubiquinone biosynthesis complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2545_Mixed,_incl._Cytidylyltransferase,_and_Ubiquinone_biosynthesis_complex


id: CL:2546
description: Cytidylyltransferase, and KR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2546_Cytidylyltransferase,_and_KR_domain


id: CL:2559
description: Ubiquinone biosynthesis complex, and N-acylneuraminate cytidylyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2559_Ubiquinone_biosynthesis_complex,_and_N-acylneuraminate_cytidylyltransferase_activity


id: CL:2573
description: Mixed, incl. Methyltransferase domain, and Methionine biosynthesis protein MetW
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2573_Mixed,_incl._Methyltransferase_domain,_and_Methionine_biosynthesis_protein_MetW


id: CL:2586
description: Mixed, incl. HIT domain, and Xenobiotic transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2586_Mixed,_incl._HIT_domain,_and_Xenobiotic_transmembrane_transporter_activity


id: CL:2599
description: Mixed, incl. Oxidoreductase family, NAD-binding Rossmann fold, and Ion transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2599_Mixed,_incl._Oxidoreductase_family,_NAD-binding_Rossmann_fold,_and_Ion_transport_protein


id: CL:2600
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2600_Mixed,_incl._Oxidoreductase_family,_NAD-binding_Rossmann_fold,_and_O-Antigen_nucleotide_sugar_biosynthesis

description:
  Mixed, incl. Oxidoreductase family, NAD-binding Rossmann fold, and O-Antigen nucleotide sugar biosynthesis


id: CL:2603
description: Mixed, incl. UDP binding domain, and Oxidoreductase family, C-terminal alpha/beta domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2603_Mixed,_incl._UDP_binding_domain,_and_Oxidoreductase_family,_C-terminal_alpha/beta_domain


id: CL:2618
description: Mixed, incl. AMIN domain, and DegT/DnrJ/EryC1/StrS aminotransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2618_Mixed,_incl._AMIN_domain,_and_DegT/DnrJ/EryC1/StrS_aminotransferase_family


id: CL:2627
description: Ion transport protein, and TM2 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2627_Ion_transport_protein,_and_TM2_domain


id: CL:2636
description: Mostly uncharacterized, incl. Phosphonate and phosphinate metabolism, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2636_Mostly_uncharacterized,_incl._Phosphonate_and_phosphinate_metabolism,_and_Methyltransferase_domain


id: CL:2637
description: Mixed, incl. Phosphonate and phosphinate metabolism, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2637_Mixed,_incl._Phosphonate_and_phosphinate_metabolism,_and_Methyltransferase_domain


id: CL:2654
description: Mixed, incl. Extracellular polysaccharide metabolic process, and Tellurite resistance protein TehB
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2654_Mixed,_incl._Extracellular_polysaccharide_metabolic_process,_and_Tellurite_resistance_protein_TehB


id: CL:2668
description: Localization, and Regulation of nucleobase-containing compound metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2668_Localization,_and_Regulation_of_nucleobase-containing_compound_metabolic_process


id: CL:2669
description: Localization, and Transcription regulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2669_Localization,_and_Transcription_regulation


id: CL:2670
description: Mixed, incl. Transporter activity, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2670_Mixed,_incl._Transporter_activity,_and_Lipopolysaccharide_biosynthesis


id: CL:2671
description: Mixed, incl. Efflux transmembrane transporter activity, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2671_Mixed,_incl._Efflux_transmembrane_transporter_activity,_and_Lipopolysaccharide_biosynthesis


id: CL:2672
description: Mixed, incl. Efflux transmembrane transporter activity, and Biotin-lipoyl like
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2672_Mixed,_incl._Efflux_transmembrane_transporter_activity,_and_Biotin-lipoyl_like


id: CL:2673
description: Mixed, incl. beta-Lactam resistance, and Lipoprotein localization
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2673_Mixed,_incl._beta-Lactam_resistance,_and_Lipoprotein_localization


id: CL:2675
description: Mixed, incl. beta-Lactam resistance, and Biotin-lipoyl like
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2675_Mixed,_incl._beta-Lactam_resistance,_and_Biotin-lipoyl_like


id: CL:2711
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2711_Mixed,_incl._Barrel-sandwich_domain_of_CusB_or_HlyD_membrane-fusion,_and_Sequence-specific_double-stranded_DNA_binding

description:
  Mixed, incl. Barrel-sandwich domain of CusB or HlyD membrane-fusion, and Sequence-specific double-stranded DNA binding


id: CL:2724
description: Mixed, incl. Acid phosphatase homologues, and Sulfuric ester hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2724_Mixed,_incl._Acid_phosphatase_homologues,_and_Sulfuric_ester_hydrolase_activity


id: CL:2726
description: Acid phosphatase homologues, and PAP2 superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2726_Acid_phosphatase_homologues,_and_PAP2_superfamily


id: CL:2753
description: Mixed, incl. Receptor, and Energy transducer activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2753_Mixed,_incl._Receptor,_and_Energy_transducer_activity


id: CL:2755
description: Mixed, incl. Siderophore transmembrane transporter activity, and ACT-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2755_Mixed,_incl._Siderophore_transmembrane_transporter_activity,_and_ACT-like_domain


id: CL:2757
description: Siderophore transmembrane transporter activity, and ACT-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2757_Siderophore_transmembrane_transporter_activity,_and_ACT-like_domain


id: CL:2775
description: Mixed, incl. ABC 3 transport family, and Iron coordination entity transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2775_Mixed,_incl._ABC_3_transport_family,_and_Iron_coordination_entity_transport


id: CL:2805
description: Mixed, incl. ABC transporters, and Organic acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2805_Mixed,_incl._ABC_transporters,_and_Organic_acid_transport


id: CL:2806
description: Mixed, incl. ABC transporters, and Organic acid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2806_Mixed,_incl._ABC_transporters,_and_Organic_acid_transport


id: CL:2807
description: ABC transporters, and Lactate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2807_ABC_transporters,_and_Lactate_metabolic_process


id: CL:2808
description: ABC transporters, and Lactate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2808_ABC_transporters,_and_Lactate_metabolic_process


id: CL:2809
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2809_Binding-protein-dependent_transport_system_inner_membrane_component,_and_Ligand-gated_channel_activity

description:
  Binding-protein-dependent transport system inner membrane component, and Ligand-gated channel activity


id: CL:2811
description: Mixed, incl. Ligand-gated channel activity, and ABC-type amino acid transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2811_Mixed,_incl._Ligand-gated_channel_activity,_and_ABC-type_amino_acid_transporter_activity


id: CL:2831
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2831_Amide_transmembrane_transporter_activity,_and_Binding-protein-dependent_transport_system_inner_membrane_component

description:
  Amide transmembrane transporter activity, and Binding-protein-dependent transport system inner membrane component


id: CL:2846
description: Molybdate ion transport, and Lactate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2846_Molybdate_ion_transport,_and_Lactate_metabolic_process


id: CL:2847
description: Molybdate ion transport, and Iron ion transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2847_Molybdate_ion_transport,_and_Iron_ion_transmembrane_transport


id: CL:285
description: Mixed, incl. ATP synthesis, and Protein import
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:285_Mixed,_incl._ATP_synthesis,_and_Protein_import


id: CL:2856
description: LUD domain, and FAD binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2856_LUD_domain,_and_FAD_binding_domain


id: CL:2866
description: Mixed, incl. NlpA lipoprotein, and rRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2866_Mixed,_incl._NlpA_lipoprotein,_and_rRNA_pseudouridine_synthesis


id: CL:2883
description: Mixed, incl. Phosphate ion transport, and PAS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2883_Mixed,_incl._Phosphate_ion_transport,_and_PAS_domain


id: CL:2913
description: Mixed, incl. NlpC/P60 family, and Dephosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2913_Mixed,_incl._NlpC/P60_family,_and_Dephosphorylation


id: CL:2935
description: Mixed, incl. Aspartic-type peptidase activity, and Base-excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2935_Mixed,_incl._Aspartic-type_peptidase_activity,_and_Base-excision_repair


id: CL:2947
description: Mixed, incl. Phospholipid transport, and Response to copper ion
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2947_Mixed,_incl._Phospholipid_transport,_and_Response_to_copper_ion


id: CL:2968
description: Mostly uncharacterized, incl. Response to chemical, and Horizontal gene transfer
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2968_Mostly_uncharacterized,_incl._Response_to_chemical,_and_Horizontal_gene_transfer


id: CL:2969
description: Mostly uncharacterized, incl. Small Multidrug Resistance protein, and NlpC/P60 family
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2969_Mostly_uncharacterized,_incl._Small_Multidrug_Resistance_protein,_and_NlpC/P60_family


id: CL:2970
description: Mixed, incl. Small Multidrug Resistance protein, and RNA 5-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2970_Mixed,_incl._Small_Multidrug_Resistance_protein,_and_RNA_5-end_processing


id: CL:2972
description: Mixed, incl. RNA 5-end processing, and Regulation of cellular component biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2972_Mixed,_incl._RNA_5-end_processing,_and_Regulation_of_cellular_component_biogenesis


id: CL:2982
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2982_Small_Multidrug_Resistance_protein,_and_Site-specific_DNA-methyltransferase_(adenine-specific)_activity

description:
  Small Multidrug Resistance protein, and Site-specific DNA-methyltransferase (adenine-specific) activity


id: CL:2993
description: Mixed, incl. NlpC/P60 family, and Peroxiredoxin activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:2993_Mixed,_incl._NlpC/P60_family,_and_Peroxiredoxin_activity


id: CL:3008
description: Mixed, incl. Terpenoid metabolic process, and Protein secretion
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3008_Mixed,_incl._Terpenoid_metabolic_process,_and_Protein_secretion


id: CL:3010
description: Mixed, incl. Type II/IV secretion system protein, and Identical protein binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3010_Mixed,_incl._Type_II/IV_secretion_system_protein,_and_Identical_protein_binding


id: CL:3030
description: Terpenoid metabolic process, and Establishment of competence for transformation
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3030_Terpenoid_metabolic_process,_and_Establishment_of_competence_for_transformation


id: CL:3039
description: Mixed, incl. Protease, and Response to copper ion
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3039_Mixed,_incl._Protease,_and_Response_to_copper_ion


id: CL:3040
description: Mostly uncharacterized, incl. Chaperone binding, and Response to copper ion
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3040_Mostly_uncharacterized,_incl._Chaperone_binding,_and_Response_to_copper_ion


id: CL:3041
description: Mixed, incl. Chaperone binding, and Clp amino terminal domain, pathogenicity island component
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3041_Mixed,_incl._Chaperone_binding,_and_Clp_amino_terminal_domain,_pathogenicity_island_component


id: CL:3054
description: Mixed, incl. Response to copper ion, and Transition metal ion transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3054_Mixed,_incl._Response_to_copper_ion,_and_Transition_metal_ion_transmembrane_transporter_activity


id: CL:306
description: Mixed, incl. Protein import, and Biopolymer transport protein ExbD/TolR
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:306_Mixed,_incl._Protein_import,_and_Biopolymer_transport_protein_ExbD/TolR


id: CL:3064
description: Mixed, incl. Lactone metabolic process, and Peptidyl-cysteine modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3064_Mixed,_incl._Lactone_metabolic_process,_and_Peptidyl-cysteine_modification


id: CL:3078
description: Mixed, incl. Polyphosphate kinase activity, and META domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3078_Mixed,_incl._Polyphosphate_kinase_activity,_and_META_domain


id: CL:3081
description: Polyphosphate kinase activity, and Purine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3081_Polyphosphate_kinase_activity,_and_Purine_metabolism


id: CL:3095
description: Mixed, incl. Phosphate transport, and CBS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3095_Mixed,_incl._Phosphate_transport,_and_CBS_domain


id: CL:3107
description: Mixed, incl. MBOAT, membrane-bound O-acyltransferase family, and Sel1-like repeats.
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3107_Mixed,_incl._MBOAT,_membrane-bound_O-acyltransferase_family,_and_Sel1-like_repeats.


id: CL:3108
description: Mixed, incl. Sel1-like repeats., and YceI-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3108_Mixed,_incl._Sel1-like_repeats.,_and_YceI-like_domain


id: CL:3110
description: Mixed, incl. YceI-like domain, and Response to organic substance
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3110_Mixed,_incl._YceI-like_domain,_and_Response_to_organic_substance


id: CL:3127
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3127_Mixed,_incl._UDP-N-acetylglucosamine_diphosphorylase_activity,_and_MBOAT,_membrane-bound_O-acyltransferase_family

description:
  Mixed, incl. UDP-N-acetylglucosamine diphosphorylase activity, and MBOAT, membrane-bound O-acyltransferase family


id: CL:3140
description: Mixed, incl. Protein N-linked glycosylation, and Glyoxylate and dicarboxylate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3140_Mixed,_incl._Protein_N-linked_glycosylation,_and_Glyoxylate_and_dicarboxylate_metabolism


id: CL:3141
description: Mixed, incl. Protein N-linked glycosylation, and Glyoxylate and dicarboxylate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3141_Mixed,_incl._Protein_N-linked_glycosylation,_and_Glyoxylate_and_dicarboxylate_metabolism


id: CL:3142
description: Mixed, incl. Glyoxylate and dicarboxylate metabolism, and Sulfate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3142_Mixed,_incl._Glyoxylate_and_dicarboxylate_metabolism,_and_Sulfate_transport


id: CL:3143
description: Mixed, incl. Sulfate transport, and Septum digestion after cytokinesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3143_Mixed,_incl._Sulfate_transport,_and_Septum_digestion_after_cytokinesis


id: CL:3156
description: Glyoxylate and dicarboxylate metabolism, and SNARE associated Golgi protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3156_Glyoxylate_and_dicarboxylate_metabolism,_and_SNARE_associated_Golgi_protein


id: CL:3167
description: Mixed, incl. Protein N-linked glycosylation, and LPP20 lipoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3167_Mixed,_incl._Protein_N-linked_glycosylation,_and_LPP20_lipoprotein


id: CL:3168
description: Mixed, incl. Protein N-linked glycosylation, and LPP20 lipoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3168_Mixed,_incl._Protein_N-linked_glycosylation,_and_LPP20_lipoprotein


id: CL:3179
description: Protein N-linked glycosylation, and Methyltransferase FkbM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3179_Protein_N-linked_glycosylation,_and_Methyltransferase_FkbM_domain


id: CL:3189
description: Mixed, incl. WYL domain, and Protein of unknown function DUF262
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3189_Mixed,_incl._WYL_domain,_and_Protein_of_unknown_function_DUF262


id: CL:3190
description: Mixed, incl. Protein of unknown function DUF262
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3190_Mixed,_incl._Protein_of_unknown_function_DUF262


id: CL:3199
description: Mixed, incl. WYL domain, and Large family of predicted nucleotide-binding domains
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3199_Mixed,_incl._WYL_domain,_and_Large_family_of_predicted_nucleotide-binding_domains


id: CL:3213
description: Mixed, incl. Protein maturation, and Oxidoreductase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3213_Mixed,_incl._Protein_maturation,_and_Oxidoreductase_complex


id: CL:3214
description: Mixed, incl. Protein maturation, and Ferredoxin hydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3214_Mixed,_incl._Protein_maturation,_and_Ferredoxin_hydrogenase_activity


id: CL:3215
description: Mixed, incl. Protein maturation, and Ferredoxin hydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3215_Mixed,_incl._Protein_maturation,_and_Ferredoxin_hydrogenase_activity


id: CL:3216
description: Mixed, incl. Protein maturation, and Acylphosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3216_Mixed,_incl._Protein_maturation,_and_Acylphosphatase


id: CL:3218
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3218_Mixed,_incl._Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_oxygen_as_acceptor,_and_Oxidoreductase_family,_NAD-binding_Rossmann_fold

description:
  Mixed, incl. Oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor, and Oxidoreductase family, NAD-binding Rossmann fold


id: CL:3243
description: Ferredoxin hydrogenase activity, and Protein processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3243_Ferredoxin_hydrogenase_activity,_and_Protein_processing


id: CL:3254
description: Mixed, incl. Extrinsic component of membrane, and ubiE/COQ5 methyltransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3254_Mixed,_incl._Extrinsic_component_of_membrane,_and_ubiE/COQ5_methyltransferase_family


id: CL:3265
description: Mostly uncharacterized, incl. Luciferase-like monooxygenase, and Voltage-dependent anion channel
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3265_Mostly_uncharacterized,_incl._Luciferase-like_monooxygenase,_and_Voltage-dependent_anion_channel


id: CL:3267
description: Mixed, incl. Luciferase-like monooxygenase, and Voltage-dependent anion channel
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3267_Mixed,_incl._Luciferase-like_monooxygenase,_and_Voltage-dependent_anion_channel


id: CL:3268
description: Mixed, incl. Sulfate assimilation, and Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3268_Mixed,_incl._Sulfate_assimilation,_and_Chromosome_segregation


id: CL:3281
description: Mixed, incl. Luciferase-like monooxygenase, and Voltage-dependent anion channel
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3281_Mixed,_incl._Luciferase-like_monooxygenase,_and_Voltage-dependent_anion_channel


id: CL:3298
description: Mixed, incl. Lactate oxidation, and Metalloprotease
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3298_Mixed,_incl._Lactate_oxidation,_and_Metalloprotease


id: CL:3310
description: Mixed, incl. Symport, and Citrate transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3310_Mixed,_incl._Symport,_and_Citrate_transporter


id: CL:3311
description: Mixed, incl. Symport, and Citrate transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3311_Mixed,_incl._Symport,_and_Citrate_transporter


id: CL:3326
description: Mixed, incl. Calcineurin-like phosphoesterase superfamily domain, and GtrA-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3326_Mixed,_incl._Calcineurin-like_phosphoesterase_superfamily_domain,_and_GtrA-like_protein


id: CL:3335
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3335_Mostly_uncharacterized,_incl._RNA_5-end_processing,_and_Bacterial_DNA_topoisomeraes_I_ATP-binding_domain

description:
  Mostly uncharacterized, incl. RNA 5-end processing, and Bacterial DNA topoisomeraes I ATP-binding domain


id: CL:3336
description: Mixed, incl. RNA 5-end processing, and Bacterial DNA topoisomeraes I ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3336_Mixed,_incl._RNA_5-end_processing,_and_Bacterial_DNA_topoisomeraes_I_ATP-binding_domain


id: CL:3356
description: Mixed, incl. Cellular polysaccharide biosynthetic process, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3356_Mixed,_incl._Cellular_polysaccharide_biosynthetic_process,_and_Signal


id: CL:337
description: Mixed, incl. rRNA modification, and 50S ribosome-binding GTPase
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:337_Mixed,_incl._rRNA_modification,_and_50S_ribosome-binding_GTPase


id: CL:3372
description: Mostly uncharacterized, incl. Peptidase family M23, and WYL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3372_Mostly_uncharacterized,_incl._Peptidase_family_M23,_and_WYL_domain


id: CL:3373
description: Mixed, incl. Peptidase family M23, and WYL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3373_Mixed,_incl._Peptidase_family_M23,_and_WYL_domain


id: CL:3376
description: Mixed, incl. Peptidase family M23, and Diguanylate cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3376_Mixed,_incl._Peptidase_family_M23,_and_Diguanylate_cyclase_activity


id: CL:339
description: Mixed, incl. Cytokinetic process, and SpoU rRNA Methylase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:339_Mixed,_incl._Cytokinetic_process,_and_SpoU_rRNA_Methylase_family


id: CL:3398
description: Mixed, incl. Mycoplasma protein of unknown function, DUF285, and Transmembrane helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3398_Mixed,_incl._Mycoplasma_protein_of_unknown_function,_DUF285,_and_Transmembrane_helix


id: CL:3417
description: Mixed, incl. Nucleic acid metabolic process, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3417_Mixed,_incl._Nucleic_acid_metabolic_process,_and_Coiled_coil


id: CL:3418
description: Mixed, incl. DNA modification, and Endonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3418_Mixed,_incl._DNA_modification,_and_Endonuclease_activity


id: CL:3419
description: Mixed, incl. DNA modification, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3419_Mixed,_incl._DNA_modification,_and_Response_to_virus


id: CL:3420
description: Mixed, incl. DNA modification, and Endonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3420_Mixed,_incl._DNA_modification,_and_Endonuclease_activity


id: CL:3421
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3421_Mixed,_incl._Site-specific_DNA-methyltransferase_(adenine-specific)_activity,_and_Restriction_endodeoxyribonuclease_activity

description:
  Mixed, incl. Site-specific DNA-methyltransferase (adenine-specific) activity, and Restriction endodeoxyribonuclease activity


id: CL:3422
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3422_Mixed,_incl._Site-specific_DNA-methyltransferase_(adenine-specific)_activity,_and_DEAD-like_helicases_superfamily

description:
  Mixed, incl. Site-specific DNA-methyltransferase (adenine-specific) activity, and DEAD-like helicases superfamily


id: CL:3424
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3424_Mixed,_incl._Site-specific_DNA-methyltransferase_(adenine-specific)_activity,_and_Rescue_of_stalled_ribosome

description:
  Mixed, incl. Site-specific DNA-methyltransferase (adenine-specific) activity, and Rescue of stalled ribosome


id: CL:3426
description: Mixed, incl. DNA restriction-modification system, and Endodeoxyribonuclease complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3426_Mixed,_incl._DNA_restriction-modification_system,_and_Endodeoxyribonuclease_complex


id: CL:3445
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3445_Mixed,_incl._TaqI-like_C-terminal_specificity_domain,_and_Site-specific_DNA-methyltransferase_(adenine-specific)_activity

description:
  Mixed, incl. TaqI-like C-terminal specificity domain, and Site-specific DNA-methyltransferase (adenine-specific) activity


id: CL:3469
description: Mixed, incl. TaqI-like C-terminal specificity domain, and Chromatin remodeling
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3469_Mixed,_incl._TaqI-like_C-terminal_specificity_domain,_and_Chromatin_remodeling


id: CL:3483
description: Mixed, incl. DNA methylase, and Restriction endodeoxyribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3483_Mixed,_incl._DNA_methylase,_and_Restriction_endodeoxyribonuclease_activity


id: CL:3485
description: Mixed, incl. DNA methylase, and Restriction endodeoxyribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3485_Mixed,_incl._DNA_methylase,_and_Restriction_endodeoxyribonuclease_activity


id: CL:3487
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3487_Mixed,_incl._Protein_secretion_by_the_type_IV_secretion_system,_and_D12_class_N6_adenine-specific_DNA_methyltransferase

description:
  Mixed, incl. Protein secretion by the type IV secretion system, and D12 class N6 adenine-specific DNA methyltransferase


id: CL:3499
description: Restriction endodeoxyribonuclease activity, and DNA methylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3499_Restriction_endodeoxyribonuclease_activity,_and_DNA_methylase


id: CL:3515
description: Calcineurin-like phosphoesterase superfamily domain, and Protein transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3515_Calcineurin-like_phosphoesterase_superfamily_domain,_and_Protein_transmembrane_transport


id: CL:3524
description: Mixed, incl. Response to virus, and Transposition
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3524_Mixed,_incl._Response_to_virus,_and_Transposition


id: CL:3526
description: Mixed, incl. Transposition, and DNA methylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3526_Mixed,_incl._Transposition,_and_DNA_methylase


id: CL:3557
description: Mixed, incl. Antiviral defense, and Protein-containing complex organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3557_Mixed,_incl._Antiviral_defense,_and_Protein-containing_complex_organization


id: CL:3558
description: Mixed, incl. Antiviral defense, and tRNA thio-modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3558_Mixed,_incl._Antiviral_defense,_and_tRNA_thio-modification


id: CL:3560
description: Mixed, incl. tRNA thio-modification, and Lipase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3560_Mixed,_incl._tRNA_thio-modification,_and_Lipase_activity


id: CL:3582
description: Mixed, incl. Fic/DOC family, and ParE toxin of type II toxin-antitoxin system, parDE
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3582_Mixed,_incl._Fic/DOC_family,_and_ParE_toxin_of_type_II_toxin-antitoxin_system,_parDE


id: CL:359
description: Mixed, incl. RF-1 domain, and Negative regulation of catalytic activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:359_Mixed,_incl._RF-1_domain,_and_Negative_regulation_of_catalytic_activity


id: CL:3600
description: Mixed, incl. DNA modification, and Pyridoxine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3600_Mixed,_incl._DNA_modification,_and_Pyridoxine_biosynthesis


id: CL:3602
description: Mixed, incl. DNA methylase, and Type II site-specific deoxyribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3602_Mixed,_incl._DNA_methylase,_and_Type_II_site-specific_deoxyribonuclease_activity


id: CL:3603
description: Mixed, incl. DNA methylase, and Pyridoxine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3603_Mixed,_incl._DNA_methylase,_and_Pyridoxine_biosynthesis


id: CL:3605
description: DNA methylase, and Type II site-specific deoxyribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3605_DNA_methylase,_and_Type_II_site-specific_deoxyribonuclease_activity


id: CL:3617
description: Pyridoxine biosynthesis, and N-4 methylation of cytosine
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3617_Pyridoxine_biosynthesis,_and_N-4_methylation_of_cytosine


id: CL:3626
description: DpnII restriction endonuclease, and DNA methylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3626_DpnII_restriction_endonuclease,_and_DNA_methylase


id: CL:3642
description: Mostly uncharacterized, incl. D12 class N6 adenine-specific DNA methyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3642_Mostly_uncharacterized,_incl._D12_class_N6_adenine-specific_DNA_methyltransferase


id: CL:3644
description: Mixed, incl. D12 class N6 adenine-specific DNA methyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3644_Mixed,_incl._D12_class_N6_adenine-specific_DNA_methyltransferase


id: CL:3663
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3663_Mostly_uncharacterized,_incl._Toxin-antitoxin_complex,_and_Secretion_by_the_type_IV_secretion_system

description:
  Mostly uncharacterized, incl. Toxin-antitoxin complex, and Secretion by the type IV secretion system


id: CL:3664
description: Mixed, incl. Toxin-antitoxin complex, and Extracellular region
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3664_Mixed,_incl._Toxin-antitoxin_complex,_and_Extracellular_region


id: CL:3665
description: Mostly uncharacterized, incl. Chromatin remodeling, and Fic/DOC family
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3665_Mostly_uncharacterized,_incl._Chromatin_remodeling,_and_Fic/DOC_family


id: CL:3667
description: Mixed, incl. Fic/DOC family, and Calcineurin-like phosphoesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3667_Mixed,_incl._Fic/DOC_family,_and_Calcineurin-like_phosphoesterase


id: CL:3669
description: Mixed, incl. Fic/DOC family, and Extracellular region
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3669_Mixed,_incl._Fic/DOC_family,_and_Extracellular_region


id: CL:3681
description: Mixed, incl. Fic/DOC family, and Regulation of growth
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3681_Mixed,_incl._Fic/DOC_family,_and_Regulation_of_growth


id: CL:369
description: Mixed, incl. Peptidase family M41, and Prohibitin homologues
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:369_Mixed,_incl._Peptidase_family_M41,_and_Prohibitin_homologues


id: CL:3692
description: Chromatin remodeling, and Methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3692_Chromatin_remodeling,_and_Methyltransferase_activity


id: CL:3708
description: Mixed, incl. Toxin-antitoxin complex, and ParB-like nuclease domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3708_Mixed,_incl._Toxin-antitoxin_complex,_and_ParB-like_nuclease_domain


id: CL:3709
description: Mixed, incl. Regulation of growth, and ParB-like nuclease domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3709_Mixed,_incl._Regulation_of_growth,_and_ParB-like_nuclease_domain


id: CL:3712
description: Mixed, incl. Toxin-antitoxin complex, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3712_Mixed,_incl._Toxin-antitoxin_complex,_and_AAA_domain


id: CL:3727
description: Regulation of growth, and Ribbon-helix-helix protein, copG family
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3727_Regulation_of_growth,_and_Ribbon-helix-helix_protein,_copG_family


id: CL:3739
description: Mixed, incl. Mismatch repair, and DNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3739_Mixed,_incl._Mismatch_repair,_and_DNA_catabolic_process


id: CL:3749
description: Mixed, incl. Secretion by the type IV secretion system, and Cell wall
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3749_Mixed,_incl._Secretion_by_the_type_IV_secretion_system,_and_Cell_wall


id: CL:3751
description: Mostly uncharacterized, incl. Cell wall
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3751_Mostly_uncharacterized,_incl._Cell_wall


id: CL:3775
description: Carbamoyltransferase N-terminus, and Transmembrane helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3775_Carbamoyltransferase_N-terminus,_and_Transmembrane_helix


id: CL:3785
description: Mixed, incl. Eco57I restriction-modification methylase, and Citrate transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3785_Mixed,_incl._Eco57I_restriction-modification_methylase,_and_Citrate_transporter


id: CL:379
description: Mixed, incl. tRNA pseudouridine synthesis, and Biopolymer transport protein ExbD/TolR
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:379_Mixed,_incl._tRNA_pseudouridine_synthesis,_and_Biopolymer_transport_protein_ExbD/TolR


id: CL:3807
description: Mostly uncharacterized, incl. DNA replication, synthesis of RNA primer
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3807_Mostly_uncharacterized,_incl._DNA_replication,_synthesis_of_RNA_primer


id: CL:3826
description: Mostly uncharacterized, incl. Protein transmembrane transport, and Peptidoglycan muralytic activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3826_Mostly_uncharacterized,_incl._Protein_transmembrane_transport,_and_Peptidoglycan_muralytic_activity


id: CL:3827
description: Mostly uncharacterized, incl. Protein transmembrane transport, and Peptidoglycan muralytic activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3827_Mostly_uncharacterized,_incl._Protein_transmembrane_transport,_and_Peptidoglycan_muralytic_activity


id: CL:3829
description: Mixed, incl. Protein transmembrane transport, and Peptidoglycan muralytic activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3829_Mixed,_incl._Protein_transmembrane_transport,_and_Peptidoglycan_muralytic_activity


id: CL:3830
description: Mixed, incl. Protein transmembrane transport, and Prokaryotic Transcriptional repressor TraM
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3830_Mixed,_incl._Protein_transmembrane_transport,_and_Prokaryotic_Transcriptional_repressor_TraM


id: CL:3831
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3831_Mostly_uncharacterized,_incl._Host_cell_cytoplasm,_and_Type_VI_secretion_system_(T6SS),_amidase_effector_protein_4

description:
  Mostly uncharacterized, incl. Host cell cytoplasm, and Type VI secretion system (T6SS), amidase effector protein 4


id: CL:3832
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3832_Mostly_uncharacterized,_incl._Type_VI_secretion_system_(T6SS),_amidase_effector_protein_4,_and_Infection_with_Mycobacterium_tuberculosis

description:
  Mostly uncharacterized, incl. Type VI secretion system (T6SS), amidase effector protein 4, and Infection with Mycobacterium tuberculosis


id: CL:3834
description: Mixed, incl. Type VI secretion system (T6SS), amidase effector protein 4, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3834_Mixed,_incl._Type_VI_secretion_system_(T6SS),_amidase_effector_protein_4,_and_Signal


id: CL:3863
description: Mixed, incl. Host cell cytoplasm, and Lipid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3863_Mixed,_incl._Host_cell_cytoplasm,_and_Lipid_metabolic_process


id: CL:3875
description: Protein transmembrane transport, and Prokaryotic Transcriptional repressor TraM
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3875_Protein_transmembrane_transport,_and_Prokaryotic_Transcriptional_repressor_TraM


id: CL:3878
description: Protein transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3878_Protein_transmembrane_transport


id: CL:3901
description: Mostly uncharacterized, incl. Peptidoglycan muralytic activity, and Dipeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3901_Mostly_uncharacterized,_incl._Peptidoglycan_muralytic_activity,_and_Dipeptidase


id: CL:3902
description: Mostly uncharacterized, incl. Peptidoglycan muralytic activity, and Endoribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3902_Mostly_uncharacterized,_incl._Peptidoglycan_muralytic_activity,_and_Endoribonuclease_activity


id: CL:3903
description: Mostly uncharacterized, incl. Cytolysis, and Endoribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3903_Mostly_uncharacterized,_incl._Cytolysis,_and_Endoribonuclease_activity


id: CL:3905
description: Mixed, incl. Cytolysis, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3905_Mixed,_incl._Cytolysis,_and_Signal


id: CL:3927
description: Mixed, incl. Lytic transglycosylase activity, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3927_Mixed,_incl._Lytic_transglycosylase_activity,_and_Signal


id: CL:3939
description: Mixed, incl. Host cell cytoplasm, and Dipeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3939_Mixed,_incl._Host_cell_cytoplasm,_and_Dipeptidase


id: CL:394
description: Mixed, incl. Septation, and Initiation factor
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:394_Mixed,_incl._Septation,_and_Initiation_factor


id: CL:3941
description: Mixed, incl. Host cell cytoplasm, and Type VI secretion system (T6SS), amidase effector protein 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3941_Mixed,_incl._Host_cell_cytoplasm,_and_Type_VI_secretion_system_(T6SS),_amidase_effector_protein_4


id: CL:3955
description: Mixed, incl. Dipeptidase, and Sulfate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3955_Mixed,_incl._Dipeptidase,_and_Sulfate_transport


id: CL:3970
description: Mixed, incl. Actin binding, and Mycoplasma protein of unknown function, DUF285
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3970_Mixed,_incl._Actin_binding,_and_Mycoplasma_protein_of_unknown_function,_DUF285


id: CL:3972
description: Mixed, incl. Mycoplasma protein of unknown function, DUF285, and Pfam phage integrase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3972_Mixed,_incl._Mycoplasma_protein_of_unknown_function,_DUF285,_and_Pfam_phage_integrase_family


id: CL:3984
description: Mycoplasma protein of unknown function, DUF285, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:3984_Mycoplasma_protein_of_unknown_function,_DUF285,_and_Signal


id: CL:4021
description: Mostly uncharacterized, incl. Phage regulatory protein Rha (Phage_pRha)
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:4021_Mostly_uncharacterized,_incl._Phage_regulatory_protein_Rha_(Phage_pRha)


id: CL:4047
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:4047_Mixed,_incl._Cytolethal_distending_toxin_A/C_domain,_and_Endonuclease/Exonuclease/phosphatase_family

description:
  Mixed, incl. Cytolethal distending toxin A/C domain, and Endonuclease/Exonuclease/phosphatase family


id: CL:4049
description: Mixed, incl. Infection with Mycobacterium tuberculosis
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:4049_Mixed,_incl._Infection_with_Mycobacterium_tuberculosis


id: CL:4075
description: Mostly uncharacterized, incl. Double-stranded DNA binding, and Toxin-antitoxin complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:4075_Mostly_uncharacterized,_incl._Double-stranded_DNA_binding,_and_Toxin-antitoxin_complex


id: CL:4076
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:4076_Mostly_uncharacterized,_incl._Transcription_cis-regulatory_region_binding,_and_Toxin-antitoxin_complex

description:
  Mostly uncharacterized, incl. Transcription cis-regulatory region binding, and Toxin-antitoxin complex


id: CL:4077
description: Mostly uncharacterized, incl. Toxin-antitoxin complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:4077_Mostly_uncharacterized,_incl._Toxin-antitoxin_complex


id: CL:408
description: Mixed, incl. Glycerophospholipid metabolism, and Membrane assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:408_Mixed,_incl._Glycerophospholipid_metabolism,_and_Membrane_assembly


id: CL:409
description: Mixed, incl. Glycerophospholipid metabolism, and AMIN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:409_Mixed,_incl._Glycerophospholipid_metabolism,_and_AMIN_domain


id: CL:4092
description: Mixed, incl. Transcription cis-regulatory region binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:4092_Mixed,_incl._Transcription_cis-regulatory_region_binding


id: CL:4101
description: Mostly uncharacterized, incl. Mismatch repair, and Nuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:4101_Mostly_uncharacterized,_incl._Mismatch_repair,_and_Nuclease_activity


id: CL:411
description: Mixed, incl. AMIN domain, and Allosteric enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:411_Mixed,_incl._AMIN_domain,_and_Allosteric_enzyme


id: CL:427
description: Phosphatidylserine decarboxylase activity, and Calcium
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:427_Phosphatidylserine_decarboxylase_activity,_and_Calcium


id: CL:436
description: Mixed, incl. Membrane assembly, and Ribosomal small subunit biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:436_Mixed,_incl._Membrane_assembly,_and_Ribosomal_small_subunit_biogenesis


id: CL:452
description: Mixed, incl. Chaperone, and Antioxidant activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:452_Mixed,_incl._Chaperone,_and_Antioxidant_activity


id: CL:453
description: Chaperone, and Antioxidant activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:453_Chaperone,_and_Antioxidant_activity


id: CL:455
description: Unfolded protein binding, and Peptidase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:455_Unfolded_protein_binding,_and_Peptidase_complex


id: CL:456
description: Unfolded protein binding, and Peptidase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:456_Unfolded_protein_binding,_and_Peptidase_complex


id: CL:467
description: Unfolded protein binding, and Chaperone binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:467_Unfolded_protein_binding,_and_Chaperone_binding


id: CL:481
description: Catalase activity, and Peptide-methionine (R)-S-oxide reductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:481_Catalase_activity,_and_Peptide-methionine_(R)-S-oxide_reductase_activity


id: CL:496
description: tRNA methyl transferase HUP domain, and Iron-sulfur cluster assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:496_tRNA_methyl_transferase_HUP_domain,_and_Iron-sulfur_cluster_assembly


id: CL:512
description: Mixed, incl. Metallo-beta-lactamase superfamily, and carboxyl-O-methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:512_Mixed,_incl._Metallo-beta-lactamase_superfamily,_and_carboxyl-O-methyltransferase_activity


id: CL:529
description: Mixed, incl. Homologous recombination, and Nucleotide excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:529_Mixed,_incl._Homologous_recombination,_and_Nucleotide_excision_repair


id: CL:530
description: Homologous recombination, and Nucleotide excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:530_Homologous_recombination,_and_Nucleotide_excision_repair


id: CL:532
description: Homologous recombination, and Nucleotide excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:532_Homologous_recombination,_and_Nucleotide_excision_repair


id: CL:536
description: SOS response, and Nucleotide-excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:536_SOS_response,_and_Nucleotide-excision_repair


id: CL:549
description: UvrD-like helicase C-terminal domain, and Damaged DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:549_UvrD-like_helicase_C-terminal_domain,_and_Damaged_DNA_binding


id: CL:600
description: Pfam phage integrase family, and Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:600_Pfam_phage_integrase_family,_and_Chromosome_segregation


id: CL:609
description: Exodeoxyribonuclease V complex, and UvrD/REP helicase N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:609_Exodeoxyribonuclease_V_complex,_and_UvrD/REP_helicase_N-terminal_domain


id: CL:623
description: Mixed, incl. Regulation of cell shape, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:623_Mixed,_incl._Regulation_of_cell_shape,_and_Cell_division


id: CL:624
description: Mostly uncharacterized, incl. RNA methyltransferase activity, and ABC transporters
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:624_Mostly_uncharacterized,_incl._RNA_methyltransferase_activity,_and_ABC_transporters


id: CL:625
description: Mostly uncharacterized, incl. ABC transporters, and Active transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:625_Mostly_uncharacterized,_incl._ABC_transporters,_and_Active_transmembrane_transporter_activity


id: CL:626
description: Mostly uncharacterized, incl. Lipopolysaccharide transport, and Mtb iron assimilation by chelation
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:626_Mostly_uncharacterized,_incl._Lipopolysaccharide_transport,_and_Mtb_iron_assimilation_by_chelation


id: CL:627
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:627_Mostly_uncharacterized,_incl._Lipopolysaccharide_transport,_and_Lipopolysaccharide_core_region_metabolic_process

description:
  Mostly uncharacterized, incl. Lipopolysaccharide transport, and Lipopolysaccharide core region metabolic process


id: CL:628
description: Mixed, incl. Lipopolysaccharide transport, and Cell wall organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:628_Mixed,_incl._Lipopolysaccharide_transport,_and_Cell_wall_organization


id: CL:630
description: Mixed, incl. Lipopolysaccharide transport, and RDD family
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:630_Mixed,_incl._Lipopolysaccharide_transport,_and_RDD_family


id: CL:632
description: Mostly uncharacterized, incl. TrkA-C domain, and Menaquinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:632_Mostly_uncharacterized,_incl._TrkA-C_domain,_and_Menaquinone_biosynthesis


id: CL:636
description: Mixed, incl. TrkA-C domain, and Menaquinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:636_Mixed,_incl._TrkA-C_domain,_and_Menaquinone_biosynthesis


id: CL:64
description: Gene expression, and Establishment of protein localization
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:64_Gene_expression,_and_Establishment_of_protein_localization


id: CL:65
description: Mixed, incl. Translation, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:65_Mixed,_incl._Translation,_and_Protein_transport


id: CL:66
description: Translation, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:66_Translation,_and_Protein_transport


id: CL:67
description: Translation, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:67_Translation,_and_Protein_transport


id: CL:675
description: Lipopolysaccharide core region metabolic process, and Thioredoxin-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:675_Lipopolysaccharide_core_region_metabolic_process,_and_Thioredoxin-like_domain


id: CL:68
description: Translation, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:68_Translation,_and_Protein_transport


id: CL:685
description: Mixed, incl. Sodium/hydrogen exchanger family, and ABC transporter transmembrane region
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:685_Mixed,_incl._Sodium/hydrogen_exchanger_family,_and_ABC_transporter_transmembrane_region


id: CL:69
description: Translation, and Protein transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:69_Translation,_and_Protein_transport


id: CL:705
description: Mixed, incl. ABC transporter-like, conserved site, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:705_Mixed,_incl._ABC_transporter-like,_conserved_site,_and_Cell_division_site


id: CL:719
description: rRNA (adenine) methyltransferase activity, and 5-3 exonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:719_rRNA_(adenine)_methyltransferase_activity,_and_5-3_exonuclease_activity


id: CL:731
description: Mixed, incl. Peptidoglycan biosynthesis, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:731_Mixed,_incl._Peptidoglycan_biosynthesis,_and_Cell_division_site


id: CL:733
description: Mixed, incl. Peptidoglycan biosynthesis, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:733_Mixed,_incl._Peptidoglycan_biosynthesis,_and_Cell_division_site


id: CL:735
description: Peptidoglycan biosynthesis, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:735_Peptidoglycan_biosynthesis,_and_Cell_division_site


id: CL:737
description: Peptidoglycan biosynthesis, and Cell cycle protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:737_Peptidoglycan_biosynthesis,_and_Cell_cycle_protein


id: CL:740
description: Mur ligase family, glutamate ligase domain, and Vancomycin resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:740_Mur_ligase_family,_glutamate_ligase_domain,_and_Vancomycin_resistance


id: CL:75
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:75_Ribosome,_and_Translation_regulator_activity


id: CL:78
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:78_Ribosome,_and_Translation_regulator_activity


id: CL:790
description: Mixed, incl. HIT domain, and Acylphosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:790_Mixed,_incl._HIT_domain,_and_Acylphosphatase


id: CL:800
description: Cellular amino acid biosynthetic process, and Nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:800_Cellular_amino_acid_biosynthetic_process,_and_Nucleotide_biosynthetic_process


id: CL:801
description: Cellular amino acid biosynthetic process, and Nucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:801_Cellular_amino_acid_biosynthetic_process,_and_Nucleoside_monophosphate_metabolic_process


id: CL:802
description: Cellular amino acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:802_Cellular_amino_acid_biosynthetic_process


id: CL:803
description: Amino-acid biosynthesis, and Aromatic amino acid family metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:803_Amino-acid_biosynthesis,_and_Aromatic_amino_acid_family_metabolic_process


id: CL:804
description: Amino-acid biosynthesis, and Aromatic amino acid family metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:804_Amino-acid_biosynthesis,_and_Aromatic_amino_acid_family_metabolic_process


id: CL:805
description: Aromatic amino acid family metabolic process, and Histidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:805_Aromatic_amino_acid_family_metabolic_process,_and_Histidine_metabolism


id: CL:806
description: Aromatic amino acid family metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:806_Aromatic_amino_acid_family_metabolic_process


id: CL:809
description: Tryptophan biosynthesis, and Chorismate binding enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:809_Tryptophan_biosynthesis,_and_Chorismate_binding_enzyme


id: CL:854
description: Branched-chain amino acid metabolic process, and Lysine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:854_Branched-chain_amino_acid_metabolic_process,_and_Lysine_metabolic_process


id: CL:856
description: C5-Branched dibasic acid metabolism, and Valine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:856_C5-Branched_dibasic_acid_metabolism,_and_Valine_metabolic_process


id: CL:889
description: Glutamine family amino acid biosynthetic process, and Diaminopimelate biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:889_Glutamine_family_amino_acid_biosynthetic_process,_and_Diaminopimelate_biosynthesis


id: CL:90
description: Small ribosomal subunit, and rRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:90_Small_ribosomal_subunit,_and_rRNA-binding


id: CL:912
description: Cysteine biosynthetic process, and Glutathione metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:912_Cysteine_biosynthetic_process,_and_Glutathione_metabolism


id: CL:913
description: Cysteine biosynthetic process, and L-serine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:913_Cysteine_biosynthetic_process,_and_L-serine_biosynthetic_process


id: CL:926
description: Mixed, incl. Glutathione metabolism, and Transsulfuration
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:926_Mixed,_incl._Glutathione_metabolism,_and_Transsulfuration


id: CL:937
description: Nucleoside monophosphate metabolic process, and One carbon pool by folate
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:937_Nucleoside_monophosphate_metabolic_process,_and_One_carbon_pool_by_folate


id: CL:938
description: Nucleoside monophosphate metabolic process, and One carbon pool by folate
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:938_Nucleoside_monophosphate_metabolic_process,_and_One_carbon_pool_by_folate


id: CL:939
description: Nucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:939_Nucleoside_monophosphate_metabolic_process


id: CL:940
description: Ribonucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:940_Ribonucleoside_monophosphate_metabolic_process


id: CL:941
description: Purine nucleoside monophosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:941_Purine_nucleoside_monophosphate_metabolic_process


id: CL:963
description: GMP metabolic process, and Nucleoside phosphate catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:963_GMP_metabolic_process,_and_Nucleoside_phosphate_catabolic_process


id: CL:988
description: Deoxyribonucleotide metabolic process, and Nucleobase-containing compound kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1172562_STRINGid_CL:988_Deoxyribonucleotide_metabolic_process,_and_Nucleobase-containing_compound_kinase_activity


id: GO:0000701
description: Purine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0000701
golevel: 7
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0000701_Purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 10
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003864
description: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003864
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0003864_3-methyl-2-oxobutanoate_hydroxymethyltransferase_activity


id: GO:0003871
description: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003871
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0003871_5-methyltetrahydropteroyltriglutamate-homocysteine_S-methyltransferase_activity


id: GO:0003882
description: CDP-diacylglycerol-serine O-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003882
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0003882_CDP-diacylglycerol-serine_O-phosphatidyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0003961
description: O-acetylhomoserine aminocarboxypropyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003961
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0003961_O-acetylhomoserine_aminocarboxypropyltransferase_activity


id: GO:0004015
description: adenosylmethionine-8-amino-7-oxononanoate transaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004015
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0004015_adenosylmethionine-8-amino-7-oxononanoate_transaminase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004316
description: 3-oxoacyl-[acyl-carrier-protein] reductase (NADPH) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004316
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0004316_3-oxoacyl-[acyl-carrier-protein]_reductase_(NADPH)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004318
description: Enoyl-[acyl-carrier-protein] reductase (NADH) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004318
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0004318_Enoyl-[acyl-carrier-protein]_reductase_(NADH)_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004365
description: glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004365
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0004365_glyceraldehyde-3-phosphate_dehydrogenase_(NAD+)_(phosphorylating)_activity


id: GO:0004471
description: Malate dehydrogenase (decarboxylating) (NAD+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004471
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0004471_Malate_dehydrogenase_(decarboxylating)_(NAD+)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004489
description: Methylenetetrahydrofolate reductase (NAD(P)H) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004489
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0004489_Methylenetetrahydrofolate_reductase_(NAD(P)H)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004719
description: protein-L-isoaspartate (D-aspartate) O-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004719
golevel: 8
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0004719_protein-L-isoaspartate_(D-aspartate)_O-methyltransferase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0005315
description: Inorganic phosphate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005315
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0005315_Inorganic_phosphate_transmembrane_transporter_activity


id: GO:0005477
description: Pyruvate secondary active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005477
golevel: 7
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0005477_Pyruvate_secondary_active_transmembrane_transporter_activity


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 11
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0008028
description: Monocarboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008028
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0008028_Monocarboxylic_acid_transmembrane_transporter_activity


id: GO:0008425
description: 2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008425
golevel: 7
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0008425_2-polyprenyl-6-methoxy-1,4-benzoquinone_methyltransferase_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008666
description: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008666
golevel: 7
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0008666_2,3,4,5-tetrahydropyridine-2,6-dicarboxylate_N-succinyltransferase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008686
description: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008686
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0008686_3,4-dihydroxy-2-butanone-4-phosphate_synthase_activity


id: GO:0008690
description: 3-deoxy-manno-octulosonate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008690
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0008690_3-deoxy-manno-octulosonate_cytidylyltransferase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008759
description: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008759
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0008759_UDP-3-O-[3-hydroxymyristoyl]_N-acetylglucosamine_deacetylase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008780
description: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008780
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0008780_acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine_O-acyltransferase_activity


id: GO:0008825
description: Cyclopropane-fatty-acyl-phospholipid synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008825
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0008825_Cyclopropane-fatty-acyl-phospholipid_synthase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 9
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 9
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009139
description: Pyrimidine nucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009139
golevel: 9
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0009139_Pyrimidine_nucleoside_diphosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 9
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009157
description: Deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009157
golevel: 9
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0009157_Deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 10
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 9
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 10
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009175
description: Pyrimidine ribonucleoside monophosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009175
golevel: 10
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0009175_Pyrimidine_ribonucleoside_monophosphate_catabolic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 9
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 10
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 9
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 10
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 10
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 9
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 10
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 9
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 10
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 10
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009330
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009330
golevel: 3
name:
  GOCC.STRING_v12.0_1172562_STRINGid_GO:0009330_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_complex


id: GO:0009427
description: Bacterial-type flagellum basal body, distal rod, L ring
memo: https://amigo.geneontology.org/amigo/term/GO:0009427
golevel: 8
name:
  GOCC.STRING_v12.0_1172562_STRINGid_GO:0009427_Bacterial-type_flagellum_basal_body,_distal_rod,_L_ring


id: GO:0009428
description: Bacterial-type flagellum basal body, distal rod, P ring
memo: https://amigo.geneontology.org/amigo/term/GO:0009428
golevel: 8
name:
  GOCC.STRING_v12.0_1172562_STRINGid_GO:0009428_Bacterial-type_flagellum_basal_body,_distal_rod,_P_ring


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 6
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 6
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0010604
description: Positive regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010604
golevel: 5
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0010604_Positive_regulation_of_macromolecule_metabolic_process


id: GO:0010605
description: Negative regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010605
golevel: 5
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0010605_Negative_regulation_of_macromolecule_metabolic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
golevel: 3
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015355
description: Secondary active monocarboxylate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015355
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0015355_Secondary_active_monocarboxylate_transmembrane_transporter_activity


id: GO:0015415
description: ATPase-coupled phosphate ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015415
golevel: 7
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0015415_ATPase-coupled_phosphate_ion_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015667
description: Site-specific DNA-methyltransferase (cytosine-N4-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015667
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0015667_Site-specific_DNA-methyltransferase_(cytosine-N4-specific)_activity


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016625
memo: https://amigo.geneontology.org/amigo/term/GO:0016625
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016625_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_iron-sulfur_protein_as_acceptor

description:
  Oxidoreductase activity, acting on the aldehyde or oxo group of donors, iron-sulfur protein as acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016641
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016641
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016641_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_oxygen_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016662
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016662
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016662_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors,_cytochrome_as_acceptor


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016675
description: Oxidoreductase activity, acting on a heme group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016675
golevel: 3
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016675_Oxidoreductase_activity,_acting_on_a_heme_group_of_donors


id: GO:0016677
description: Oxidoreductase activity, acting on a heme group of donors, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016677
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016677_Oxidoreductase_activity,_acting_on_a_heme_group_of_donors,_nitrogenous_group_as_acceptor


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016699
description: Oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016699
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016699_Oxidoreductase_activity,_acting_on_hydrogen_as_donor,_iron-sulfur_protein_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016702
memo: https://amigo.geneontology.org/amigo/term/GO:0016702
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016702_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen


id: GO:0016703
memo: https://amigo.geneontology.org/amigo/term/GO:0016703
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016703_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_one_atom_of_oxygen_(internal_monooxygenases_or_internal_mixed_function_oxidases)

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)


id: GO:0016705
memo: https://amigo.geneontology.org/amigo/term/GO:0016705
golevel: 3
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016705_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: GO:0016721
description: Oxidoreductase activity, acting on superoxide radicals as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016721
golevel: 3
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016721_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016773
description: Phosphotransferase activity, alcohol group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016773
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016773_Phosphotransferase_activity,_alcohol_group_as_acceptor


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016825
description: Hydrolase activity, acting on acid phosphorus-nitrogen bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016825
golevel: 3
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016825_Hydrolase_activity,_acting_on_acid_phosphorus-nitrogen_bonds


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016864
description: Intramolecular oxidoreductase activity, transposing S-S bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016864
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016864_Intramolecular_oxidoreductase_activity,_transposing_S-S_bonds


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016869
description: Intramolecular transferase activity, transferring amino groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016869
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016869_Intramolecular_transferase_activity,_transferring_amino_groups


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016888
description: Endodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016888
golevel: 7
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016888_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016889
description: Endodeoxyribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016889
golevel: 7
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016889_Endodeoxyribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 7
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016894
memo: https://amigo.geneontology.org/amigo/term/GO:0016894
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016894_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_3-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 7
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016896
description: Exoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016896
golevel: 7
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016896_Exoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016899
description: Oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016899
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016899_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_oxygen_as_acceptor


id: GO:0016901
memo: https://amigo.geneontology.org/amigo/term/GO:0016901
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016901_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0018339
description: peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid
memo: https://amigo.geneontology.org/amigo/term/GO:0018339
golevel: 8
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0018339_peptidyl-L-beta-methylthioaspartic_acid_biosynthetic_process_from_peptidyl-aspartic_acid


id: GO:0019171
description: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019171
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0019171_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 5
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019279
description: L-methionine biosynthetic process from L-homoserine via cystathionine
memo: https://amigo.geneontology.org/amigo/term/GO:0019279
golevel: 13
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0019279_L-methionine_biosynthetic_process_from_L-homoserine_via_cystathionine


id: GO:0019281
description: L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
memo: https://amigo.geneontology.org/amigo/term/GO:0019281
golevel: 14
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0019281_L-methionine_biosynthetic_process_from_homoserine_via_O-succinyl-L-homoserine_and_cystathionine


id: GO:0019288
description: Isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019288
golevel: 8
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0019288_Isopentenyl_diphosphate_biosynthetic_process,_methylerythritol_4-phosphate_pathway


id: GO:0019294
description: keto-3-deoxy-D-manno-octulosonic acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019294
golevel: 8
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0019294_keto-3-deoxy-D-manno-octulosonic_acid_biosynthetic_process


id: GO:0019829
description: ATPase-coupled cation transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019829
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0019829_ATPase-coupled_cation_transmembrane_transporter_activity


id: GO:0030604
description: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030604
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0030604_1-deoxy-D-xylulose-5-phosphate_reductoisomerase_activity


id: GO:0030613
description: Oxidoreductase activity, acting on phosphorus or arsenic in donors
memo: https://amigo.geneontology.org/amigo/term/GO:0030613
golevel: 3
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0030613_Oxidoreductase_activity,_acting_on_phosphorus_or_arsenic_in_donors


id: GO:0030614
description: Oxidoreductase activity, acting on phosphorus or arsenic in donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0030614
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0030614_Oxidoreductase_activity,_acting_on_phosphorus_or_arsenic_in_donors,_disulfide_as_acceptor


id: GO:0030697
description: S-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030697
golevel: 9
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0030697_S-adenosylmethionine-dependent_tRNA_(m5U54)_methyltransferase_activity


id: GO:0031233
description: Intrinsic component of external side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031233
name:
  GOCC.STRING_v12.0_1172562_STRINGid_GO:0031233_Intrinsic_component_of_external_side_of_plasma_membrane


id: GO:0031234
description: Extrinsic component of cytoplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031234
golevel: 6
name:
  GOCC.STRING_v12.0_1172562_STRINGid_GO:0031234_Extrinsic_component_of_cytoplasmic_side_of_plasma_membrane


id: GO:0031235
description: Intrinsic component of the cytoplasmic side of the plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031235
name:
  GOCC.STRING_v12.0_1172562_STRINGid_GO:0031235_Intrinsic_component_of_the_cytoplasmic_side_of_the_plasma_membrane


id: GO:0031246
description: Intrinsic component of periplasmic side of cell outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031246
name:
  GOCC.STRING_v12.0_1172562_STRINGid_GO:0031246_Intrinsic_component_of_periplasmic_side_of_cell_outer_membrane


id: GO:0031554
description: Regulation of DNA-templated transcription, termination
memo: https://amigo.geneontology.org/amigo/term/GO:0031554
golevel: 11
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0031554_Regulation_of_DNA-templated_transcription,_termination


id: GO:0032414
description: Positive regulation of ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0032414
golevel: 8
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0032414_Positive_regulation_of_ion_transmembrane_transporter_activity


id: GO:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
golevel: 3
name:
  GOCC.STRING_v12.0_1172562_STRINGid_GO:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GO:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
golevel: 3
name:
  GOCC.STRING_v12.0_1172562_STRINGid_GO:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GO:0033283
description: ATPase-coupled organic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033283
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0033283_ATPase-coupled_organic_acid_transmembrane_transporter_activity


id: GO:0033284
description: ATPase-coupled carboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033284
golevel: 7
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0033284_ATPase-coupled_carboxylic_acid_transmembrane_transporter_activity


id: GO:0033467
description: CMP-keto-3-deoxy-D-manno-octulosonic acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033467
golevel: 7
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0033467_CMP-keto-3-deoxy-D-manno-octulosonic_acid_metabolic_process


id: GO:0033468
description: CMP-keto-3-deoxy-D-manno-octulosonic acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033468
golevel: 8
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0033468_CMP-keto-3-deoxy-D-manno-octulosonic_acid_biosynthetic_process


id: GO:0033744
description: L-methionine:thioredoxin-disulfide S-oxidoreductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033744
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0033744_L-methionine:thioredoxin-disulfide_S-oxidoreductase_activity


id: GO:0033818
description: Beta-ketoacyl-acyl-carrier-protein synthase III activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033818
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0033818_Beta-ketoacyl-acyl-carrier-protein_synthase_III_activity


id: GO:0034023
description: 5-(carboxyamino)imidazole ribonucleotide mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034023
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0034023_5-(carboxyamino)imidazole_ribonucleotide_mutase_activity


id: GO:0034249
description: Negative regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034249
golevel: 6
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0034249_Negative_regulation_of_cellular_amide_metabolic_process


id: GO:0034250
description: Positive regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034250
golevel: 6
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0034250_Positive_regulation_of_cellular_amide_metabolic_process


id: GO:0034404
description: Nucleobase-containing small molecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034404
golevel: 6
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0034404_Nucleobase-containing_small_molecule_biosynthetic_process


id: GO:0034656
description: Nucleobase-containing small molecule catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034656
golevel: 6
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0034656_Nucleobase-containing_small_molecule_catabolic_process


id: GO:0035592
description: Establishment of protein localization to extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0035592
golevel: 6
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0035592_Establishment_of_protein_localization_to_extracellular_region


id: GO:0035998
description: 7,8-dihydroneopterin 3-triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0035998
golevel: 6
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0035998_7,8-dihydroneopterin_3-triphosphate_biosynthetic_process


id: GO:0036361
description: Racemase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0036361
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0036361_Racemase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0042083
description: 5,10-methylenetetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042083
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0042083_5,10-methylenetetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042085
description: 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042085
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0042085_5-methyltetrahydropteroyltri-L-glutamate-dependent_methyltransferase_activity


id: GO:0042279
description: Nitrite reductase (cytochrome, ammonia-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042279
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0042279_Nitrite_reductase_(cytochrome,_ammonia-forming)_activity


id: GO:0042777
description: Proton motive force-driven plasma membrane ATP synthesis
memo: https://amigo.geneontology.org/amigo/term/GO:0042777
golevel: 13
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0042777_Proton_motive_force-driven_plasma_membrane_ATP_synthesis


id: GO:0043161
description: Proteasome-mediated ubiquitin-dependent protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0043161
golevel: 9
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0043161_Proteasome-mediated_ubiquitin-dependent_protein_catabolic_process


id: GO:0043165
description: Gram-negative-bacterium-type cell outer membrane assembly
memo: https://amigo.geneontology.org/amigo/term/GO:0043165
golevel: 6
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0043165_Gram-negative-bacterium-type_cell_outer_membrane_assembly


id: GO:0043225
description: ATPase-coupled inorganic anion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043225
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0043225_ATPase-coupled_inorganic_anion_transmembrane_transporter_activity


id: GO:0043333
description: 2-octaprenyl-6-methoxy-1,4-benzoquinone methylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043333
golevel: 8
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0043333_2-octaprenyl-6-methoxy-1,4-benzoquinone_methylase_activity


id: GO:0043632
description: Modification-dependent macromolecule catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0043632
golevel: 6
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0043632_Modification-dependent_macromolecule_catabolic_process


id: GO:0043772
description: Acyl-phosphate glycerol-3-phosphate acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043772
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0043772_Acyl-phosphate_glycerol-3-phosphate_acyltransferase_activity


id: GO:0043811
description: Phosphate:acyl-[acyl carrier protein] acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043811
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0043811_Phosphate:acyl-[acyl_carrier_protein]_acyltransferase_activity


id: GO:0043891
description: glyceraldehyde-3-phosphate dehydrogenase (NAD(P)+) (phosphorylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043891
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0043891_glyceraldehyde-3-phosphate_dehydrogenase_(NAD(P)+)_(phosphorylating)_activity


id: GO:0044419
description: Biological process involved in interspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0044419
golevel: 1
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0044419_Biological_process_involved_in_interspecies_interaction_between_organisms


id: GO:0044769
description: ATPase activity, coupled to transmembrane movement of ions, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0044769
golevel: 7
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0044769_ATPase_activity,_coupled_to_transmembrane_movement_of_ions,_rotational_mechanism


id: GO:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
golevel: 6
name:
  GOCC.STRING_v12.0_1172562_STRINGid_GO:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GO:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
golevel: 6
name:
  GOCC.STRING_v12.0_1172562_STRINGid_GO:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GO:0045934
description: Negative regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045934
golevel: 6
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0045934_Negative_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0045935
description: Positive regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045935
golevel: 6
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0045935_Positive_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0046400
description: keto-3-deoxy-D-manno-octulosonic acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0046400
golevel: 6
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0046400_keto-3-deoxy-D-manno-octulosonic_acid_metabolic_process


id: GO:0046429
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046429
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0046429_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_synthase_activity


id: GO:0046537
description: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046537
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0046537_2,3-bisphosphoglycerate-independent_phosphoglycerate_mutase_activity


id: GO:0046912
description: Acyltransferase activity, acyl groups converted into alkyl on transfer
memo: https://amigo.geneontology.org/amigo/term/GO:0046912
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0046912_Acyltransferase_activity,_acyl_groups_converted_into_alkyl_on_transfer


id: GO:0046915
description: Transition metal ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046915
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0046915_Transition_metal_ion_transmembrane_transporter_activity


id: GO:0046933
description: Proton-transporting ATP synthase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046933
golevel: 8
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0046933_Proton-transporting_ATP_synthase_activity,_rotational_mechanism


id: GO:0046961
description: Proton-transporting ATPase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046961
golevel: 8
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0046961_Proton-transporting_ATPase_activity,_rotational_mechanism


id: GO:0046992
description: Oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond
memo: https://amigo.geneontology.org/amigo/term/GO:0046992
golevel: 3
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0046992_Oxidoreductase_activity,_acting_on_X-H_and_Y-H_to_form_an_X-Y_bond


id: GO:0047451
description: 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047451
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0047451_3-hydroxyoctanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0047480
description: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047480
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0047480_UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine_ligase_activity


id: GO:0050511
description: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050511
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0050511_Undecaprenyldiphospho-muramoylpentapeptide_beta-N-acetylglucosaminyltransferase_activity


id: GO:0050515
description: 4-(cytidine 5-diphospho)-2-C-methyl-D-erythritol kinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050515
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0050515_4-(cytidine_5-diphospho)-2-C-methyl-D-erythritol_kinase_activity


id: GO:0050518
description: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050518
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0050518_2-C-methyl-D-erythritol_4-phosphate_cytidylyltransferase_activity


id: GO:0050566
description: asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050566
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0050566_asparaginyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0050567
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050567
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0050567_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0051075
description: S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051075
golevel: 3
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0051075_S-adenosylmethionine:tRNA_ribosyltransferase-isomerase_activity


id: GO:0051172
description: Negative regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051172
golevel: 5
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0051172_Negative_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051173
description: Positive regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051173
golevel: 5
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0051173_Positive_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051240
description: Positive regulation of multicellular organismal process
memo: https://amigo.geneontology.org/amigo/term/GO:0051240
golevel: 4
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0051240_Positive_regulation_of_multicellular_organismal_process


id: GO:0051703
description: Biological process involved in intraspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0051703
golevel: 1
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0051703_Biological_process_involved_in_intraspecies_interaction_between_organisms


id: GO:0051712
description: Positive regulation of killing of cells of another organism
memo: https://amigo.geneontology.org/amigo/term/GO:0051712
golevel: 7
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0051712_Positive_regulation_of_killing_of_cells_of_another_organism


id: GO:0051745
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051745
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0051745_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_reductase_activity


id: GO:0051748
description: UTP-monosaccharide-1-phosphate uridylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051748
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0051748_UTP-monosaccharide-1-phosphate_uridylyltransferase_activity


id: GO:0051991
memo: https://amigo.geneontology.org/amigo/term/GO:0051991
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0051991_UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol_4-beta-N-acetylglucosaminlytransferase_activity

description:
  UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity


id: GO:0051992
memo: https://amigo.geneontology.org/amigo/term/GO:0051992
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0051992_UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate_transferase_activity

description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity


id: GO:0052042
description: Positive regulation by symbiont of host programmed cell death
memo: https://amigo.geneontology.org/amigo/term/GO:0052042
golevel: 8
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0052042_Positive_regulation_by_symbiont_of_host_programmed_cell_death


id: GO:0052151
description: Positive regulation by symbiont of host apoptotic process
memo: https://amigo.geneontology.org/amigo/term/GO:0052151
golevel: 9
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0052151_Positive_regulation_by_symbiont_of_host_apoptotic_process


id: GO:0052592
description: Oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0052592
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0052592_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_with_an_iron-sulfur_protein_as_acceptor


id: GO:0052740
description: 1-acyl-2-lysophosphatidylserine acylhydrolase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052740
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0052740_1-acyl-2-lysophosphatidylserine_acylhydrolase_activity


id: GO:0052908
description: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052908
golevel: 9
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0052908_16S_rRNA_(adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase_activity


id: GO:0055086
description: Nucleobase-containing small molecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0055086
golevel: 3
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0055086_Nucleobase-containing_small_molecule_metabolic_process


id: GO:0061504
description: Cyclic threonylcarbamoyladenosine biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0061504
golevel: 11
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0061504_Cyclic_threonylcarbamoyladenosine_biosynthetic_process


id: GO:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
golevel: 4
name:
  GOCC.STRING_v12.0_1172562_STRINGid_GO:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GO:0070290
description: N-acylphosphatidylethanolamine-specific phospholipase D activity
memo: https://amigo.geneontology.org/amigo/term/GO:0070290
golevel: 6
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0070290_N-acylphosphatidylethanolamine-specific_phospholipase_D_activity


id: GO:0070626
memo: https://amigo.geneontology.org/amigo/term/GO:0070626
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0070626_(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)_succinate_lyase_(fumarate-forming)_activity

description:
  (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity


id: GO:0070647
description: Protein modification by small protein conjugation or removal
memo: https://amigo.geneontology.org/amigo/term/GO:0070647
golevel: 6
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0070647_Protein_modification_by_small_protein_conjugation_or_removal


id: GO:0071575
description: Integral component of external side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0071575
name:
  GOCC.STRING_v12.0_1172562_STRINGid_GO:0071575_Integral_component_of_external_side_of_plasma_membrane


id: GO:0071596
description: Ubiquitin-dependent protein catabolic process via the N-end rule pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0071596
golevel: 10
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0071596_Ubiquitin-dependent_protein_catabolic_process_via_the_N-end_rule_pathway


id: GO:0071951
description: Conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
memo: https://amigo.geneontology.org/amigo/term/GO:0071951
golevel: 12
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0071951_Conversion_of_methionyl-tRNA_to_N-formyl-methionyl-tRNA


id: GO:0072599
description: Establishment of protein localization to endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0072599
golevel: 7
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0072599_Establishment_of_protein_localization_to_endoplasmic_reticulum


id: GO:0097171
description: ADP-L-glycero-beta-D-manno-heptose biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0097171
golevel: 8
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0097171_ADP-L-glycero-beta-D-manno-heptose_biosynthetic_process


id: GO:0097588
description: Archaeal or bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:0097588
golevel: 4
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0097588_Archaeal_or_bacterial-type_flagellum-dependent_cell_motility


id: GO:0102027
description: S-adenosylmethionine:2-demethylquinol-8 methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102027
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0102027_S-adenosylmethionine:2-demethylquinol-8_methyltransferase_activity


id: GO:0102028
description: Cystathionine gamma-synthase activity (acts on O-phosphohomoserine)
memo: https://amigo.geneontology.org/amigo/term/GO:0102028
golevel: 4
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0102028_Cystathionine_gamma-synthase_activity_(acts_on_O-phosphohomoserine)


id: GO:0102094
description: S-adenosylmethionine:2-demethylmenaquinol methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102094
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0102094_S-adenosylmethionine:2-demethylmenaquinol_methyltransferase_activity


id: GO:0102955
description: S-adenosylmethionine:2-demethylmenaquinol-7 methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0102955
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0102955_S-adenosylmethionine:2-demethylmenaquinol-7_methyltransferase_activity


id: GO:0106074
description: aminoacyl-tRNA metabolism involved in translational fidelity
memo: https://amigo.geneontology.org/amigo/term/GO:0106074
golevel: 9
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:0106074_aminoacyl-tRNA_metabolism_involved_in_translational_fidelity


id: GO:0140078
description: Class I DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0140078
golevel: 5
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:0140078_Class_I_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:1900191
description: Negative regulation of single-species biofilm formation
memo: https://amigo.geneontology.org/amigo/term/GO:1900191
golevel: 7
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:1900191_Negative_regulation_of_single-species_biofilm_formation


id: GO:1901381
description: Positive regulation of potassium ion transmembrane transport
memo: https://amigo.geneontology.org/amigo/term/GO:1901381
golevel: 10
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:1901381_Positive_regulation_of_potassium_ion_transmembrane_transport


id: GO:1901505
description: Carbohydrate derivative transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901505
golevel: 3
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:1901505_Carbohydrate_derivative_transmembrane_transporter_activity


id: GO:1901618
description: Organic hydroxy compound transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901618
golevel: 3
name:
  GOMF.STRING_v12.0_1172562_STRINGid_GO:1901618_Organic_hydroxy_compound_transmembrane_transporter_activity


id: GO:1901800
description: Positive regulation of proteasomal protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1901800
golevel: 9
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:1901800_Positive_regulation_of_proteasomal_protein_catabolic_process


id: GO:1902021
description: Regulation of bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:1902021
golevel: 6
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:1902021_Regulation_of_bacterial-type_flagellum-dependent_cell_motility


id: GO:1902221
description: Erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1902221
golevel: 8
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:1902221_Erythrose_4-phosphate/phosphoenolpyruvate_family_amino_acid_metabolic_process


id: GO:1902223
description: Erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:1902223
golevel: 9
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:1902223_Erythrose_4-phosphate/phosphoenolpyruvate_family_amino_acid_biosynthetic_process


id: GO:1903050
description: Regulation of proteolysis involved in protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1903050
golevel: 7
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:1903050_Regulation_of_proteolysis_involved_in_protein_catabolic_process


id: GO:1903052
description: Positive regulation of proteolysis involved in protein catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:1903052
golevel: 8
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:1903052_Positive_regulation_of_proteolysis_involved_in_protein_catabolic_process


id: GO:1903507
description: Negative regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903507
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:1903507_Negative_regulation_of_nucleic_acid-templated_transcription


id: GO:1903508
description: Positive regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903508
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:1903508_Positive_regulation_of_nucleic_acid-templated_transcription


id: GO:1904950
description: Negative regulation of establishment of protein localization
memo: https://amigo.geneontology.org/amigo/term/GO:1904950
golevel: 7
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:1904950_Negative_regulation_of_establishment_of_protein_localization


id: GO:1904951
description: Positive regulation of establishment of protein localization
memo: https://amigo.geneontology.org/amigo/term/GO:1904951
golevel: 7
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:1904951_Positive_regulation_of_establishment_of_protein_localization


id: GO:2000112
description: Regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000112
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:2000112_Regulation_of_cellular_macromolecule_biosynthetic_process


id: GO:2000113
description: Negative regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000113
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:2000113_Negative_regulation_of_cellular_macromolecule_biosynthetic_process


id: GO:2001060
description: D-glycero-D-manno-heptose 7-phosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:2001060
golevel: 5
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:2001060_D-glycero-D-manno-heptose_7-phosphate_metabolic_process


id: GO:2001061
description: D-glycero-D-manno-heptose 7-phosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2001061
golevel: 6
name:
  GOBP.STRING_v12.0_1172562_STRINGid_GO:2001061_D-glycero-D-manno-heptose_7-phosphate_biosynthetic_process


id: GOCC:0000015
description: Phosphopyruvate hydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000015
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0000015_Phosphopyruvate_hydratase_complex


id: GOCC:0000408
description: EKC/KEOPS complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000408
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0000408_EKC/KEOPS_complex


id: GOCC:0000428
description: DNA-directed RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000428
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0000428_DNA-directed_RNA_polymerase_complex


id: GOCC:0000502
description: Proteasome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000502
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0000502_Proteasome_complex


id: GOCC:0002189
description: Ribose phosphate diphosphokinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0002189
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0002189_Ribose_phosphate_diphosphokinase_complex


id: GOCC:0005576
description: Extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0005576
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0005576_Extracellular_region


id: GOCC:0005615
description: Extracellular space
memo: https://amigo.geneontology.org/amigo/term/GO:0005615
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0005615_Extracellular_space


id: GOCC:0005740
description: Mitochondrial envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0005740
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0005740_Mitochondrial_envelope


id: GOCC:0005743
description: Mitochondrial inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005743
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0005743_Mitochondrial_inner_membrane


id: GOCC:0005746
description: Mitochondrial respirasome
memo: https://amigo.geneontology.org/amigo/term/GO:0005746
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0005746_Mitochondrial_respirasome


id: GOCC:0005747
description: Mitochondrial respiratory chain complex I
memo: https://amigo.geneontology.org/amigo/term/GO:0005747
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0005747_Mitochondrial_respiratory_chain_complex_I


id: GOCC:0005759
description: Mitochondrial matrix
memo: https://amigo.geneontology.org/amigo/term/GO:0005759
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0005759_Mitochondrial_matrix


id: GOCC:0005783
description: Endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0005783
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0005783_Endoplasmic_reticulum


id: GOCC:0005788
description: Endoplasmic reticulum lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0005788
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0005788_Endoplasmic_reticulum_lumen


id: GOCC:0005789
description: Endoplasmic reticulum membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005789
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0005789_Endoplasmic_reticulum_membrane


id: GOCC:0005798
description: Golgi-associated vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0005798
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0005798_Golgi-associated_vesicle


id: GOCC:0005815
description: Microtubule organizing center
memo: https://amigo.geneontology.org/amigo/term/GO:0005815
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0005815_Microtubule_organizing_center


id: GOCC:0005835
description: Fatty acid synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005835
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0005835_Fatty_acid_synthase_complex


id: GOCC:0005838
description: Proteasome regulatory particle
memo: https://amigo.geneontology.org/amigo/term/GO:0005838
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0005838_Proteasome_regulatory_particle


id: GOCC:0005839
description: Proteasome core complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005839
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0005839_Proteasome_core_complex


id: GOCC:0005881
description: Cytoplasmic microtubule
memo: https://amigo.geneontology.org/amigo/term/GO:0005881
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0005881_Cytoplasmic_microtubule


id: GOCC:0005882
description: Intermediate filament
memo: https://amigo.geneontology.org/amigo/term/GO:0005882
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0005882_Intermediate_filament


id: GOCC:0005887
description: Integral component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005887
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0005887_Integral_component_of_plasma_membrane


id: GOCC:0005911
description: Cell-cell junction
memo: https://amigo.geneontology.org/amigo/term/GO:0005911
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0005911_Cell-cell_junction


id: GOCC:0005948
description: Acetolactate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005948
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0005948_Acetolactate_synthase_complex


id: GOCC:0005951
description: Carbamoyl-phosphate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005951
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0005951_Carbamoyl-phosphate_synthase_complex


id: GOCC:0005971
description: Ribonucleoside-diphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005971
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0005971_Ribonucleoside-diphosphate_reductase_complex


id: GOCC:0008023
description: Transcription elongation factor complex
memo: https://amigo.geneontology.org/amigo/term/GO:0008023
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0008023_Transcription_elongation_factor_complex


id: GOCC:0008076
description: Voltage-gated potassium channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0008076
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0008076_Voltage-gated_potassium_channel_complex


id: GOCC:0008540
description: Proteasome regulatory particle, base subcomplex
memo: https://amigo.geneontology.org/amigo/term/GO:0008540
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0008540_Proteasome_regulatory_particle,_base_subcomplex


id: GOCC:0009279
description: Cell outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009279
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009279_Cell_outer_membrane


id: GOCC:0009288
description: Bacterial-type flagellum
memo: https://amigo.geneontology.org/amigo/term/GO:0009288
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009288_Bacterial-type_flagellum


id: GOCC:0009316
description: 3-isopropylmalate dehydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009316
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009316_3-isopropylmalate_dehydratase_complex


id: GOCC:0009317
description: acetyl-CoA carboxylase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009317
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009317_acetyl-CoA_carboxylase_complex


id: GOCC:0009318
description: Exodeoxyribonuclease VII complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009318
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009318_Exodeoxyribonuclease_VII_complex


id: GOCC:0009326
description: Formate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009326
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009326_Formate_dehydrogenase_complex


id: GOCC:0009328
description: phenylalanine-tRNA ligase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009328
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009328_phenylalanine-tRNA_ligase_complex


id: GOCC:0009330
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009330
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009330_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_complex


id: GOCC:0009331
description: glycerol-3-phosphate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009331
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009331_glycerol-3-phosphate_dehydrogenase_complex


id: GOCC:0009338
description: Exodeoxyribonuclease V complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009338
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009338_Exodeoxyribonuclease_V_complex


id: GOCC:0009339
description: Glycolate oxidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009339
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009339_Glycolate_oxidase_complex


id: GOCC:0009345
description: glycine-tRNA ligase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009345
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009345_glycine-tRNA_ligase_complex


id: GOCC:0009347
description: Aspartate carbamoyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009347
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009347_Aspartate_carbamoyltransferase_complex


id: GOCC:0009349
description: Riboflavin synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009349
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009349_Riboflavin_synthase_complex


id: GOCC:0009358
description: Polyphosphate kinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009358
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009358_Polyphosphate_kinase_complex


id: GOCC:0009360
description: DNA polymerase III complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009360
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009360_DNA_polymerase_III_complex


id: GOCC:0009368
description: Endopeptidase Clp complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009368
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009368_Endopeptidase_Clp_complex


id: GOCC:0009375
description: Ferredoxin hydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009375
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009375_Ferredoxin_hydrogenase_complex


id: GOCC:0009376
description: HslUV protease complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009376
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009376_HslUV_protease_complex


id: GOCC:0009379
description: Holliday junction helicase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009379
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009379_Holliday_junction_helicase_complex


id: GOCC:0009380
description: Excinuclease repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009380
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009380_Excinuclease_repair_complex


id: GOCC:0009382
description: Imidazoleglycerol-phosphate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009382
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009382_Imidazoleglycerol-phosphate_synthase_complex


id: GOCC:0009420
description: Bacterial-type flagellum filament
memo: https://amigo.geneontology.org/amigo/term/GO:0009420
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009420_Bacterial-type_flagellum_filament


id: GOCC:0009421
description: Bacterial-type flagellum filament cap
memo: https://amigo.geneontology.org/amigo/term/GO:0009421
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009421_Bacterial-type_flagellum_filament_cap


id: GOCC:0009424
description: Bacterial-type flagellum hook
memo: https://amigo.geneontology.org/amigo/term/GO:0009424
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009424_Bacterial-type_flagellum_hook


id: GOCC:0009425
description: Bacterial-type flagellum basal body
memo: https://amigo.geneontology.org/amigo/term/GO:0009425
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009425_Bacterial-type_flagellum_basal_body


id: GOCC:0009426
description: Bacterial-type flagellum basal body, distal rod
memo: https://amigo.geneontology.org/amigo/term/GO:0009426
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009426_Bacterial-type_flagellum_basal_body,_distal_rod


id: GOCC:0009427
description: Bacterial-type flagellum basal body, distal rod, L ring
memo: https://amigo.geneontology.org/amigo/term/GO:0009427
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009427_Bacterial-type_flagellum_basal_body,_distal_rod,_L_ring


id: GOCC:0009428
description: Bacterial-type flagellum basal body, distal rod, P ring
memo: https://amigo.geneontology.org/amigo/term/GO:0009428
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009428_Bacterial-type_flagellum_basal_body,_distal_rod,_P_ring


id: GOCC:0009431
description: Bacterial-type flagellum basal body, MS ring
memo: https://amigo.geneontology.org/amigo/term/GO:0009431
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009431_Bacterial-type_flagellum_basal_body,_MS_ring


id: GOCC:0009538
description: Photosystem I reaction center
memo: https://amigo.geneontology.org/amigo/term/GO:0009538
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009538_Photosystem_I_reaction_center


id: GOCC:0009570
description: Chloroplast stroma
memo: https://amigo.geneontology.org/amigo/term/GO:0009570
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009570_Chloroplast_stroma


id: GOCC:0009654
description: Photosystem II oxygen evolving complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009654
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009654_Photosystem_II_oxygen_evolving_complex


id: GOCC:0009897
description: External side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009897
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009897_External_side_of_plasma_membrane


id: GOCC:0009898
description: Cytoplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009898
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0009898_Cytoplasmic_side_of_plasma_membrane


id: GOCC:0010008
description: Endosome membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0010008
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0010008_Endosome_membrane


id: GOCC:0012505
description: Endomembrane system
memo: https://amigo.geneontology.org/amigo/term/GO:0012505
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0012505_Endomembrane_system


id: GOCC:0012507
description: ER to Golgi transport vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0012507
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0012507_ER_to_Golgi_transport_vesicle_membrane


id: GOCC:0015627
description: Type II protein secretion system complex
memo: https://amigo.geneontology.org/amigo/term/GO:0015627
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0015627_Type_II_protein_secretion_system_complex


id: GOCC:0015630
description: Microtubule cytoskeleton
memo: https://amigo.geneontology.org/amigo/term/GO:0015630
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0015630_Microtubule_cytoskeleton


id: GOCC:0015934
description: Large ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0015934
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0015934_Large_ribosomal_subunit


id: GOCC:0015935
description: Small ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0015935
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0015935_Small_ribosomal_subunit


id: GOCC:0016021
description: Integral component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0016021
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0016021_Integral_component_of_membrane


id: GOCC:0016465
description: Chaperonin ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016465
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0016465_Chaperonin_ATPase_complex


id: GOCC:0016469
description: Proton-transporting two-sector ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016469
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0016469_Proton-transporting_two-sector_ATPase_complex


id: GOCC:0018995
description: Host cellular component
memo: https://amigo.geneontology.org/amigo/term/GO:0018995
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0018995_Host_cellular_component


id: GOCC:0019008
description: Molybdopterin synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0019008
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0019008_Molybdopterin_synthase_complex


id: GOCC:0019812
description: Type I site-specific deoxyribonuclease complex
memo: https://amigo.geneontology.org/amigo/term/GO:0019812
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0019812_Type_I_site-specific_deoxyribonuclease_complex


id: GOCC:0019866
description: Organelle inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019866
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0019866_Organelle_inner_membrane


id: GOCC:0019897
description: Extrinsic component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019897
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0019897_Extrinsic_component_of_plasma_membrane


id: GOCC:0019898
description: Extrinsic component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019898
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0019898_Extrinsic_component_of_membrane


id: GOCC:0022624
description: Proteasome accessory complex
memo: https://amigo.geneontology.org/amigo/term/GO:0022624
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0022624_Proteasome_accessory_complex


id: GOCC:0022625
description: Cytosolic large ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0022625
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0022625_Cytosolic_large_ribosomal_subunit


id: GOCC:0022626
description: Cytosolic ribosome
memo: https://amigo.geneontology.org/amigo/term/GO:0022626
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0022626_Cytosolic_ribosome


id: GOCC:0022627
description: Cytosolic small ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0022627
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0022627_Cytosolic_small_ribosomal_subunit


id: GOCC:0030076
description: Light-harvesting complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030076
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0030076_Light-harvesting_complex


id: GOCC:0030127
description: COPII vesicle coat
memo: https://amigo.geneontology.org/amigo/term/GO:0030127
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0030127_COPII_vesicle_coat


id: GOCC:0030133
description: Transport vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0030133
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0030133_Transport_vesicle


id: GOCC:0030134
description: COPII-coated ER to Golgi transport vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0030134
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0030134_COPII-coated_ER_to_Golgi_transport_vesicle


id: GOCC:0030176
description: Integral component of endoplasmic reticulum membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030176
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0030176_Integral_component_of_endoplasmic_reticulum_membrane


id: GOCC:0030256
description: Type I protein secretion system complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030256
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0030256_Type_I_protein_secretion_system_complex


id: GOCC:0030257
description: Type III protein secretion system complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030257
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0030257_Type_III_protein_secretion_system_complex


id: GOCC:0030288
description: Outer membrane-bounded periplasmic space
memo: https://amigo.geneontology.org/amigo/term/GO:0030288
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0030288_Outer_membrane-bounded_periplasmic_space


id: GOCC:0030312
description: External encapsulating structure
memo: https://amigo.geneontology.org/amigo/term/GO:0030312
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0030312_External_encapsulating_structure


id: GOCC:0030658
description: Transport vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030658
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0030658_Transport_vesicle_membrane


id: GOCC:0030659
description: Cytoplasmic vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030659
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0030659_Cytoplasmic_vesicle_membrane


id: GOCC:0030660
description: Golgi-associated vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030660
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0030660_Golgi-associated_vesicle_membrane


id: GOCC:0030662
description: Coated vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030662
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0030662_Coated_vesicle_membrane


id: GOCC:0030677
description: Ribonuclease P complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030677
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0030677_Ribonuclease_P_complex


id: GOCC:0030694
description: Bacterial-type flagellum basal body, rod
memo: https://amigo.geneontology.org/amigo/term/GO:0030694
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0030694_Bacterial-type_flagellum_basal_body,_rod


id: GOCC:0030880
description: RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030880
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0030880_RNA_polymerase_complex


id: GOCC:0030956
description: glutamyl-tRNA(Gln) amidotransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030956
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0030956_glutamyl-tRNA(Gln)_amidotransferase_complex


id: GOCC:0030964
description: NADH dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030964
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0030964_NADH_dehydrogenase_complex


id: GOCC:0031090
description: Organelle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031090
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0031090_Organelle_membrane


id: GOCC:0031224
description: Intrinsic component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031224
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0031224_Intrinsic_component_of_membrane


id: GOCC:0031226
description: Intrinsic component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031226
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0031226_Intrinsic_component_of_plasma_membrane


id: GOCC:0031227
description: Intrinsic component of endoplasmic reticulum membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031227
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0031227_Intrinsic_component_of_endoplasmic_reticulum_membrane


id: GOCC:0031230
description: Intrinsic component of cell outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031230
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0031230_Intrinsic_component_of_cell_outer_membrane


id: GOCC:0031233
description: Intrinsic component of external side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031233
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0031233_Intrinsic_component_of_external_side_of_plasma_membrane


id: GOCC:0031234
description: Extrinsic component of cytoplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031234
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0031234_Extrinsic_component_of_cytoplasmic_side_of_plasma_membrane


id: GOCC:0031235
description: Intrinsic component of the cytoplasmic side of the plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031235
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0031235_Intrinsic_component_of_the_cytoplasmic_side_of_the_plasma_membrane


id: GOCC:0031241
description: Periplasmic side of cell outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031241
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0031241_Periplasmic_side_of_cell_outer_membrane


id: GOCC:0031246
description: Intrinsic component of periplasmic side of cell outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031246
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0031246_Intrinsic_component_of_periplasmic_side_of_cell_outer_membrane


id: GOCC:0031300
description: Intrinsic component of organelle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031300
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0031300_Intrinsic_component_of_organelle_membrane


id: GOCC:0031301
description: Integral component of organelle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031301
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0031301_Integral_component_of_organelle_membrane


id: GOCC:0031304
description: Intrinsic component of mitochondrial inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031304
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0031304_Intrinsic_component_of_mitochondrial_inner_membrane


id: GOCC:0031305
description: Integral component of mitochondrial inner membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031305
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0031305_Integral_component_of_mitochondrial_inner_membrane


id: GOCC:0031317
description: Tripartite ATP-independent periplasmic transporter complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031317
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0031317_Tripartite_ATP-independent_periplasmic_transporter_complex


id: GOCC:0031410
description: Cytoplasmic vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0031410
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0031410_Cytoplasmic_vesicle


id: GOCC:0031469
description: Polyhedral organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0031469
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0031469_Polyhedral_organelle


id: GOCC:0031471
description: Ethanolamine degradation polyhedral organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0031471
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0031471_Ethanolamine_degradation_polyhedral_organelle


id: GOCC:0031522
description: Cell envelope Sec protein transport complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031522
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0031522_Cell_envelope_Sec_protein_transport_complex


id: GOCC:0031597
description: Cytosolic proteasome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031597
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0031597_Cytosolic_proteasome_complex


id: GOCC:0031901
description: Early endosome membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031901
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0031901_Early_endosome_membrane


id: GOCC:0031966
description: Mitochondrial membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031966
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0031966_Mitochondrial_membrane


id: GOCC:0031967
description: Organelle envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0031967
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0031967_Organelle_envelope


id: GOCC:0031974
description: Membrane-enclosed lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0031974
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0031974_Membrane-enclosed_lumen


id: GOCC:0031976
description: Plastid thylakoid
memo: https://amigo.geneontology.org/amigo/term/GO:0031976
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0031976_Plastid_thylakoid


id: GOCC:0031984
description: Organelle subcompartment
memo: https://amigo.geneontology.org/amigo/term/GO:0031984
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0031984_Organelle_subcompartment


id: GOCC:0032153
description: Cell division site
memo: https://amigo.geneontology.org/amigo/term/GO:0032153
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0032153_Cell_division_site


id: GOCC:0032299
description: Ribonuclease H2 complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032299
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0032299_Ribonuclease_H2_complex


id: GOCC:0032300
description: Mismatch repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032300
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0032300_Mismatch_repair_complex


id: GOCC:0032592
description: Integral component of mitochondrial membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0032592
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0032592_Integral_component_of_mitochondrial_membrane


id: GOCC:0032991
description: Protein-containing complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032991
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0032991_Protein-containing_complex


id: GOCC:0032993
description: protein-DNA complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032993
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0032993_protein-DNA_complex


id: GOCC:0033104
description: Type VI protein secretion system complex
memo: https://amigo.geneontology.org/amigo/term/GO:0033104
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0033104_Type_VI_protein_secretion_system_complex


id: GOCC:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GOCC:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GOCC:0033202
description: DNA helicase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0033202
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0033202_DNA_helicase_complex


id: GOCC:0033281
description: TAT protein transport complex
memo: https://amigo.geneontology.org/amigo/term/GO:0033281
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0033281_TAT_protein_transport_complex


id: GOCC:0034357
description: Photosynthetic membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0034357
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0034357_Photosynthetic_membrane


id: GOCC:0034451
description: Centriolar satellite
memo: https://amigo.geneontology.org/amigo/term/GO:0034451
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0034451_Centriolar_satellite


id: GOCC:0034702
description: Ion channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034702
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0034702_Ion_channel_complex


id: GOCC:0034703
description: Cation channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034703
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0034703_Cation_channel_complex


id: GOCC:0034705
description: Potassium channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034705
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0034705_Potassium_channel_complex


id: GOCC:0034708
description: Methyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034708
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0034708_Methyltransferase_complex


id: GOCC:0035796
description: ATP-binding cassette (ABC) transporter complex, transmembrane substrate-binding subunit-containing
memo: https://amigo.geneontology.org/amigo/term/GO:0035796
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0035796_ATP-binding_cassette_(ABC)_transporter_complex,_transmembrane_substrate-binding_subunit-containing


id: GOCC:0036477
description: Somatodendritic compartment
memo: https://amigo.geneontology.org/amigo/term/GO:0036477
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0036477_Somatodendritic_compartment


id: GOCC:0042175
description: Nuclear outer membrane-endoplasmic reticulum membrane network
memo: https://amigo.geneontology.org/amigo/term/GO:0042175
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0042175_Nuclear_outer_membrane-endoplasmic_reticulum_membrane_network


id: GOCC:0042575
description: DNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0042575
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0042575_DNA_polymerase_complex


id: GOCC:0042597
description: Periplasmic space
memo: https://amigo.geneontology.org/amigo/term/GO:0042597
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0042597_Periplasmic_space


id: GOCC:0042651
description: Thylakoid membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0042651
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0042651_Thylakoid_membrane


id: GOCC:0042788
description: Polysomal ribosome
memo: https://amigo.geneontology.org/amigo/term/GO:0042788
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0042788_Polysomal_ribosome


id: GOCC:0043005
description: Neuron projection
memo: https://amigo.geneontology.org/amigo/term/GO:0043005
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0043005_Neuron_projection


id: GOCC:0043190
description: ATP-binding cassette (ABC) transporter complex
memo: https://amigo.geneontology.org/amigo/term/GO:0043190
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0043190_ATP-binding_cassette_(ABC)_transporter_complex


id: GOCC:0043227
description: Membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043227
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0043227_Membrane-bounded_organelle


id: GOCC:0043228
description: Non-membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043228
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0043228_Non-membrane-bounded_organelle


id: GOCC:0043229
description: Intracellular organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043229
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0043229_Intracellular_organelle


id: GOCC:0043230
description: Extracellular organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043230
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0043230_Extracellular_organelle


id: GOCC:0043231
description: Intracellular membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043231
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0043231_Intracellular_membrane-bounded_organelle


id: GOCC:0043232
description: Intracellular non-membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043232
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0043232_Intracellular_non-membrane-bounded_organelle


id: GOCC:0043527
description: tRNA methyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0043527
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0043527_tRNA_methyltransferase_complex


id: GOCC:0043590
description: Bacterial nucleoid
memo: https://amigo.geneontology.org/amigo/term/GO:0043590
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0043590_Bacterial_nucleoid


id: GOCC:0043684
description: Type IV secretion system complex
memo: https://amigo.geneontology.org/amigo/term/GO:0043684
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0043684_Type_IV_secretion_system_complex


id: GOCC:0044391
description: Ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0044391
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0044391_Ribosomal_subunit


id: GOCC:0044776
description: DNA polymerase III, core complex
memo: https://amigo.geneontology.org/amigo/term/GO:0044776
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0044776_DNA_polymerase_III,_core_complex


id: GOCC:0044815
description: DNA packaging complex
memo: https://amigo.geneontology.org/amigo/term/GO:0044815
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0044815_DNA_packaging_complex


id: GOCC:0045111
description: Intermediate filament cytoskeleton
memo: https://amigo.geneontology.org/amigo/term/GO:0045111
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0045111_Intermediate_filament_cytoskeleton


id: GOCC:0045203
description: Integral component of cell outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0045203
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0045203_Integral_component_of_cell_outer_membrane


id: GOCC:0045259
description: Proton-transporting ATP synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0045259
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0045259_Proton-transporting_ATP_synthase_complex


id: GOCC:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GOCC:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GOCC:0045271
description: Respiratory chain complex I
memo: https://amigo.geneontology.org/amigo/term/GO:0045271
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0045271_Respiratory_chain_complex_I


id: GOCC:0045272
description: Plasma membrane respiratory chain complex I
memo: https://amigo.geneontology.org/amigo/term/GO:0045272
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0045272_Plasma_membrane_respiratory_chain_complex_I


id: GOCC:0045277
description: Respiratory chain complex IV
memo: https://amigo.geneontology.org/amigo/term/GO:0045277
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0045277_Respiratory_chain_complex_IV


id: GOCC:0045278
description: Plasma membrane respiratory chain complex IV
memo: https://amigo.geneontology.org/amigo/term/GO:0045278
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0045278_Plasma_membrane_respiratory_chain_complex_IV


id: GOCC:0048476
description: Holliday junction resolvase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0048476
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0048476_Holliday_junction_resolvase_complex


id: GOCC:0048500
description: Signal recognition particle
memo: https://amigo.geneontology.org/amigo/term/GO:0048500
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0048500_Signal_recognition_particle


id: GOCC:0055035
description: Plastid thylakoid membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0055035
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0055035_Plastid_thylakoid_membrane


id: GOCC:0055052
description: ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing
memo: https://amigo.geneontology.org/amigo/term/GO:0055052
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0055052_ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing


id: GOCC:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GOCC:0065010
description: Extracellular membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0065010
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0065010_Extracellular_membrane-bounded_organelle


id: GOCC:0070013
description: Intracellular organelle lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0070013
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0070013_Intracellular_organelle_lumen


id: GOCC:0070062
description: Extracellular exosome
memo: https://amigo.geneontology.org/amigo/term/GO:0070062
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0070062_Extracellular_exosome


id: GOCC:0070069
description: Cytochrome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0070069
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0070069_Cytochrome_complex


id: GOCC:0070161
description: Anchoring junction
memo: https://amigo.geneontology.org/amigo/term/GO:0070161
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0070161_Anchoring_junction


id: GOCC:0070470
description: Plasma membrane respirasome
memo: https://amigo.geneontology.org/amigo/term/GO:0070470
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0070470_Plasma_membrane_respirasome


id: GOCC:0071513
description: Phosphopantothenoylcysteine decarboxylase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0071513
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0071513_Phosphopantothenoylcysteine_decarboxylase_complex


id: GOCC:0071575
description: Integral component of external side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0071575
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0071575_Integral_component_of_external_side_of_plasma_membrane


id: GOCC:0097708
description: Intracellular vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0097708
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0097708_Intracellular_vesicle


id: GOCC:0098533
description: ATPase dependent transmembrane transport complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098533
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0098533_ATPase_dependent_transmembrane_transport_complex


id: GOCC:0098561
description: Methyl accepting chemotaxis protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098561
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0098561_Methyl_accepting_chemotaxis_protein_complex


id: GOCC:0098562
description: Cytoplasmic side of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0098562
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0098562_Cytoplasmic_side_of_membrane


id: GOCC:0098573
description: Intrinsic component of mitochondrial membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0098573
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0098573_Intrinsic_component_of_mitochondrial_membrane


id: GOCC:0098588
description: Bounding membrane of organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0098588
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0098588_Bounding_membrane_of_organelle


id: GOCC:0098796
description: Membrane protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098796
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0098796_Membrane_protein_complex


id: GOCC:0098797
description: Plasma membrane protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098797
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0098797_Plasma_membrane_protein_complex


id: GOCC:0098798
description: Mitochondrial protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098798
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0098798_Mitochondrial_protein_complex


id: GOCC:0098800
description: Inner mitochondrial membrane protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098800
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0098800_Inner_mitochondrial_membrane_protein_complex


id: GOCC:0098803
description: Respiratory chain complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098803
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0098803_Respiratory_chain_complex


id: GOCC:0098827
description: Endoplasmic reticulum subcompartment
memo: https://amigo.geneontology.org/amigo/term/GO:0098827
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0098827_Endoplasmic_reticulum_subcompartment


id: GOCC:0098858
description: Actin-based cell projection
memo: https://amigo.geneontology.org/amigo/term/GO:0098858
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0098858_Actin-based_cell_projection


id: GOCC:0098862
description: Cluster of actin-based cell projections
memo: https://amigo.geneontology.org/amigo/term/GO:0098862
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0098862_Cluster_of_actin-based_cell_projections


id: GOCC:0099080
description: Supramolecular complex
memo: https://amigo.geneontology.org/amigo/term/GO:0099080
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0099080_Supramolecular_complex


id: GOCC:0099081
description: Supramolecular polymer
memo: https://amigo.geneontology.org/amigo/term/GO:0099081
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0099081_Supramolecular_polymer


id: GOCC:0099512
description: Supramolecular fiber
memo: https://amigo.geneontology.org/amigo/term/GO:0099512
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0099512_Supramolecular_fiber


id: GOCC:0099513
description: Polymeric cytoskeletal fiber
memo: https://amigo.geneontology.org/amigo/term/GO:0099513
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0099513_Polymeric_cytoskeletal_fiber


id: GOCC:0101031
description: Chaperone complex
memo: https://amigo.geneontology.org/amigo/term/GO:0101031
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0101031_Chaperone_complex


id: GOCC:0110142
description: Ubiquinone biosynthesis complex
memo: https://amigo.geneontology.org/amigo/term/GO:0110142
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0110142_Ubiquinone_biosynthesis_complex


id: GOCC:0110165
description: Cellular anatomical entity
memo: https://amigo.geneontology.org/amigo/term/GO:0110165
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0110165_Cellular_anatomical_entity


id: GOCC:0120025
description: Plasma membrane bounded cell projection
memo: https://amigo.geneontology.org/amigo/term/GO:0120025
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:0120025_Plasma_membrane_bounded_cell_projection


id: GOCC:1902494
description: Catalytic complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902494
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1902494_Catalytic_complex


id: GOCC:1902495
description: Transmembrane transporter complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902495
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1902495_Transmembrane_transporter_complex


id: GOCC:1902503
description: Adenylyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902503
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1902503_Adenylyltransferase_complex


id: GOCC:1902508
description: 2-iminoacetate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902508
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1902508_2-iminoacetate_synthase_complex


id: GOCC:1902509
description: Methionine-importing complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902509
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1902509_Methionine-importing_complex


id: GOCC:1902555
description: Endoribonuclease complex
memo: https://amigo.geneontology.org/amigo/term/GO:1902555
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1902555_Endoribonuclease_complex


id: GOCC:1903561
description: Extracellular vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:1903561
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1903561_Extracellular_vesicle


id: GOCC:1905347
description: Endodeoxyribonuclease complex
memo: https://amigo.geneontology.org/amigo/term/GO:1905347
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1905347_Endodeoxyribonuclease_complex


id: GOCC:1905348
description: Endonuclease complex
memo: https://amigo.geneontology.org/amigo/term/GO:1905348
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1905348_Endonuclease_complex


id: GOCC:1905368
description: Peptidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1905368
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1905368_Peptidase_complex


id: GOCC:1905369
description: Endopeptidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1905369
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1905369_Endopeptidase_complex


id: GOCC:1990063
description: Bam protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990063
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1990063_Bam_protein_complex


id: GOCC:1990065
description: Dxr protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990065
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1990065_Dxr_protein_complex


id: GOCC:1990077
description: Primosome complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990077
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1990077_Primosome_complex


id: GOCC:1990078
description: Replication inhibiting complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990078
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1990078_Replication_inhibiting_complex


id: GOCC:1990101
description: DnaA-oriC complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990101
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1990101_DnaA-oriC_complex


id: GOCC:1990102
description: DnaA-DiaA complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990102
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1990102_DnaA-DiaA_complex


id: GOCC:1990104
description: DNA bending complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990104
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1990104_DNA_bending_complex


id: GOCC:1990140
description: MPT synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990140
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1990140_MPT_synthase_complex


id: GOCC:1990197
description: ATP-dependent methionine-importing complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990197
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1990197_ATP-dependent_methionine-importing_complex


id: GOCC:1990201
description: Alkanesulfonate monooxygenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990201
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1990201_Alkanesulfonate_monooxygenase_complex


id: GOCC:1990204
description: Oxidoreductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990204
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1990204_Oxidoreductase_complex


id: GOCC:1990207
description: EmrE multidrug transporter complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990207
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1990207_EmrE_multidrug_transporter_complex


id: GOCC:1990220
description: GroEL-GroES complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990220
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1990220_GroEL-GroES_complex


id: GOCC:1990221
description: L-cysteine desulfurase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990221
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1990221_L-cysteine_desulfurase_complex


id: GOCC:1990228
description: Sulfurtransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990228
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1990228_Sulfurtransferase_complex


id: GOCC:1990229
description: Iron-sulfur cluster assembly complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990229
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1990229_Iron-sulfur_cluster_assembly_complex


id: GOCC:1990234
description: Transferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990234
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1990234_Transferase_complex


id: GOCC:1990281
description: Efflux pump complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990281
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1990281_Efflux_pump_complex


id: GOCC:1990329
description: IscS-TusA complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990329
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1990329_IscS-TusA_complex


id: GOCC:1990330
description: IscS-IscU complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990330
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1990330_IscS-IscU_complex


id: GOCC:1990351
description: Transporter complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990351
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1990351_Transporter_complex


id: GOCC:1990391
description: DNA repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990391
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1990391_DNA_repair_complex


id: GOCC:1990531
description: Phospholipid-translocating ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990531
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1990531_Phospholipid-translocating_ATPase_complex


id: GOCC:1990904
description: Ribonucleoprotein complex
memo: https://amigo.geneontology.org/amigo/term/GO:1990904
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1172562_STRINGid_GOCC:1990904_Ribonucleoprotein_complex


id: IPR000114
description: Ribosomal protein L16
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000114
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR000114_Ribosomal_protein_L16


id: IPR000119
description: Histone-like DNA-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000119
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR000119_Histone-like_DNA-binding_protein


id: IPR000218
description: Ribosomal protein L14P
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000218
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR000218_Ribosomal_protein_L14P


id: IPR000266
description: Ribosomal protein S17/S11
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000266
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR000266_Ribosomal_protein_S17/S11


id: IPR000307
description: Ribosomal protein S16
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000307
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR000307_Ribosomal_protein_S16


id: IPR000424
description: Primosome PriB/single-strand DNA-binding
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000424
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR000424_Primosome_PriB/single-strand_DNA-binding


id: IPR000440
description: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000440
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR000440_NADH:ubiquinone/plastoquinone_oxidoreductase,_chain_3


id: IPR000504
description: RNA recognition motif domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000504
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR000504_RNA_recognition_motif_domain


id: IPR000515
description: ABC transporter type 1, transmembrane domain MetI-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000515
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR000515_ABC_transporter_type_1,_transmembrane_domain_MetI-like


id: IPR000630
description: Ribosomal protein S8
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000630
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR000630_Ribosomal_protein_S8


id: IPR000754
description: Ribosomal protein S9
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000754
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR000754_Ribosomal_protein_S9


id: IPR000795
description: Translational (tr)-type GTP-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000795
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR000795_Translational_(tr)-type_GTP-binding_domain


id: IPR000851
description: Ribosomal protein S5
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000851
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR000851_Ribosomal_protein_S5


id: IPR000866
description: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR000866
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR000866_Alkyl_hydroperoxide_reductase_subunit_C/_Thiol_specific_antioxidant


id: IPR001029
description: Flagellin, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001029
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR001029_Flagellin,_N-terminal_domain


id: IPR001062
description: Transcription antitermination protein, NusG
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001062
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR001062_Transcription_antitermination_protein,_NusG


id: IPR001133
description: NADH-ubiquinone oxidoreductase chain 4L/K
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001133
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR001133_NADH-ubiquinone_oxidoreductase_chain_4L/K


id: IPR001172
description: Flagellar motor switch FliN/Type III secretion HrcQb
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001172
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR001172_Flagellar_motor_switch_FliN/Type_III_secretion_HrcQb


id: IPR001351
description: Ribosomal protein S3, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001351
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR001351_Ribosomal_protein_S3,_C-terminal


id: IPR001444
description: Flagellar basal body rod protein, N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001444
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR001444_Flagellar_basal_body_rod_protein,_N-terminal


id: IPR001543
description: Flagellar motor switch protein FliN-like, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001543
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR001543_Flagellar_motor_switch_protein_FliN-like,_C-terminal_domain


id: IPR001694
description: NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001694
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR001694_NADH:ubiquinone_oxidoreductase,_subunit_1/F420H2_oxidoreductase_subunit_H


id: IPR001705
description: Ribosomal protein L33
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001705
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR001705_Ribosomal_protein_L33


id: IPR001706
description: Ribosomal protein L35, non-mitochondrial
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001706
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR001706_Ribosomal_protein_L35,_non-mitochondrial


id: IPR001789
description: Signal transduction response regulator, receiver domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001789
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR001789_Signal_transduction_response_regulator,_receiver_domain


id: IPR001848
description: Ribosomal protein S10
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001848
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR001848_Ribosomal_protein_S10


id: IPR001854
description: Ribosomal protein L29/L35
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001854
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR001854_Ribosomal_protein_L29/L35


id: IPR001857
description: Ribosomal protein L19
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001857
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR001857_Ribosomal_protein_L19


id: IPR001867
description: OmpR/PhoB-type DNA-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001867
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR001867_OmpR/PhoB-type_DNA-binding_domain


id: IPR001892
description: Ribosomal protein S13
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001892
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR001892_Ribosomal_protein_S13


id: IPR001911
description: Ribosomal protein S21
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001911
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR001911_Ribosomal_protein_S21


id: IPR001971
description: Ribosomal protein S11
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR001971
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR001971_Ribosomal_protein_S11


id: IPR002132
description: Ribosomal protein L5
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR002132
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR002132_Ribosomal_protein_L5


id: IPR002145
description: Ribbon-helix-helix protein, CopG
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR002145
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR002145_Ribbon-helix-helix_protein,_CopG


id: IPR002150
description: Ribosomal protein L31
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR002150
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR002150_Ribosomal_protein_L31


id: IPR002171
description: Ribosomal protein L2
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR002171
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR002171_Ribosomal_protein_L2


id: IPR002191
description: Bacterial export protein family 3
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR002191
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR002191_Bacterial_export_protein_family_3


id: IPR002205
description: DNA topoisomerase, type IIA, domain A
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR002205
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1172562_STRINGid_IPR002205_DNA_topoisomerase,_type_IIA,_domain_A


