# geneInfo

ensembl_gene_id: LFA_0001
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA, DNA-binding transcriptional dual regulator; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: LFA_0002
symbol: dnaN
gene_biotype: protein_coding
description:
  DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of  [...]


ensembl_gene_id: LFA_0003
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP.


ensembl_gene_id: LFA_0004
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase, subunit B (type II topoisomerase); A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP [...]


ensembl_gene_id: LFA_0009
symbol: aguA
gene_biotype: protein_coding
description:
  Putative agmatine deiminase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_0010
symbol: speA
gene_biotype: protein_coding
description:
  Biosynthetic arginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. Belongs to the Orn/Lys/Arg decarboxylase class-II family. SpeA subfamily.


ensembl_gene_id: LFA_0013
symbol: hfq
gene_biotype: protein_coding
description:
  RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: LFA_0014
symbol: hflX
gene_biotype: protein_coding
description:
  Putative GTPase; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: LFA_0015
symbol: kup
gene_biotype: protein_coding
description:
  Putative potassium transport system protein kup 1; Transport of potassium into the cell; Belongs to the HAK/KUP transporter (TC 2.A.72) family.


ensembl_gene_id: LFA_0028
symbol: rlmL
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase K/L [Includes: 23S rRNA m2G2445 methyltransferase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family.


ensembl_gene_id: LFA_0031
symbol: LFA_0031
gene_biotype: protein_coding
description:
  Conserved exported protein of unknown function; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors.


ensembl_gene_id: LFA_0033
symbol: pit
gene_biotype: protein_coding
description:
  Putative low-affinity inorganic phosphate transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_0034
symbol: coq
gene_biotype: protein_coding
description:
  2-nonaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.


ensembl_gene_id: LFA_0038
symbol: LFA_0038
gene_biotype: protein_coding
description:
  Putative Sensory box sensor histidine kinase/response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.


ensembl_gene_id: LFA_0043
symbol: truD
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.


ensembl_gene_id: LFA_0044
symbol: LFA_0044
gene_biotype: protein_coding
description:
  Putative outer membrane efflux protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_0049
symbol: LFA_0049
gene_biotype: protein_coding
description:
  Putative sulfatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_0051
symbol: LFA_0051
gene_biotype: protein_coding
description:
  Conserved protein of unknown function with CBS domain; Homologs of previously reported genes of unknown function.


ensembl_gene_id: LFA_0052
symbol: thlA
gene_biotype: protein_coding
description:
  Acetyl-CoA acetyltransferase; Function of strongly homologous gene; enzyme; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: LFA_0056
symbol: legA
gene_biotype: protein_coding
description:
  Ankyrin-repeat containing protein. Substrate of the Dot/Icm secretion system; Function of strongly homologous gene; factor.


ensembl_gene_id: LFA_0059
symbol: LFA_0059
gene_biotype: protein_coding
description:
  Protein of unknown function [Tetratricopeptide repeat]; No homology to any previously reported sequences.


ensembl_gene_id: LFA_0062
symbol: LFA_0062
gene_biotype: protein_coding
description:
  Protein of unknown function [Cyclic nucleotide-binding]; No homology to any previously reported sequences.


ensembl_gene_id: LFA_0064
symbol: adhI
gene_biotype: protein_coding
description:
  S-(hydroxymethyl)glutathione dehydrogenase; Function of strongly homologous gene; enzyme; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.


ensembl_gene_id: LFA_0068
symbol: LFA_0068
gene_biotype: protein_coding
description:
  Conserved protein of unknown function [Heat shock protein DnaJ, N-terminal]; Homologs of previously reported genes of unknown function.


ensembl_gene_id: LFA_0075
symbol: LFA_0075
gene_biotype: protein_coding
description:
  Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; membrane component.


ensembl_gene_id: LFA_0077
symbol: LFA_0077
gene_biotype: protein_coding
description:
  Succinylglutamate desuccinylase / aspartoacylase family; Function of strongly homologous gene; enzyme.


ensembl_gene_id: LFA_0080
symbol: mgtA
gene_biotype: protein_coding
description:
  Magnesium transporter; Function of homologous gene experimentally demonstrated in an other organism; transporter.


ensembl_gene_id: LFA_0081
symbol: LFA_0081
gene_biotype: protein_coding
description:
  Conserved protein of unknown function [Leucine-rich repeat]; Homologs of previously reported genes of unknown function.


ensembl_gene_id: LFA_0089
symbol: LFA_0089
gene_biotype: protein_coding
description:
  Putative Dot/Icm T4SS effector; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.


ensembl_gene_id: LFA_0095
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B (ATP-dependent DNA excision repair enzyme UvrAC); The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. I [...]


ensembl_gene_id: LFA_0098
symbol: LFA_0098
gene_biotype: protein_coding
description:
  Putative glutamate synthase (NADPH); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the glutamate synthase family.


ensembl_gene_id: LFA_0099
symbol: zapA
gene_biotype: protein_coding
description:
  Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: LFA_0101
symbol: pepP
gene_biotype: protein_coding
description:
  Proline aminopeptidase P II; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_0113
symbol: yaiI
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0178 family.


ensembl_gene_id: LFA_0117
symbol: rnr
gene_biotype: protein_coding
description:
  Exoribonuclease R, RNase R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: LFA_0118
symbol: rlmB
gene_biotype: protein_coding
description:
  23S rRNA (Gm2251)-methyltransferase; Specifically methylates the ribose of guanosine 2251 in 23S rRNA.


ensembl_gene_id: LFA_0119
symbol: rpiA
gene_biotype: protein_coding
description:
  Ribose 5-phosphate isomerase, constitutive; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.


ensembl_gene_id: LFA_0121
symbol: LFA_0121
gene_biotype: protein_coding
description:
  Putative Response regulator receiver; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.


ensembl_gene_id: LFA_0125
symbol: polA
gene_biotype: protein_coding
description:
  Fused DNA polymerase I 5'->3' exonuclease; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: LFA_0126
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-acylglucosamine N-acyltransferase 1; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: LFA_0130
symbol: LFA_0130
gene_biotype: protein_coding
description:
  Putative Histidinol-phosphate transaminase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_0133
symbol: mdcC
gene_biotype: protein_coding
description:
  Putative malonate decarboxylase, delta subunit; Subunit of malonate decarboxylase, it is an acyl carrier protein to which acetyl and malonyl thioester residues are bound via a 2'-(5''-phosphoribosyl)-3'-dephospho-CoA prosthetic group and turn over during the catalytic mechanism.


ensembl_gene_id: LFA_0139
symbol: LFA_0139
gene_biotype: protein_coding
description:
  Putative adenylate-forming enzyme; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_0140
symbol: LFA_0140
gene_biotype: protein_coding
description:
  Beta-lactamase domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_0143
symbol: LFA_0143
gene_biotype: protein_coding
description:
  Putative Glucosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_0149
symbol: glnP
gene_biotype: protein_coding
description:
  Putative glutamine transport system permease protein GlnP; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_0150
symbol: LFA_0150
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: LFA_0160
symbol: fabF
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase 2; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: LFA_0167
symbol: LFA_0167
gene_biotype: protein_coding
description:
  Putative Diguanylate phosphodiesterase (EAL domain); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_0169
symbol: gcvPB
gene_biotype: protein_coding
description:
  Putative glycine dehydrogenase (decarboxylating) subunit 2; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily.


ensembl_gene_id: LFA_0171
symbol: gcvPA
gene_biotype: protein_coding
description:
  Putative glycine dehydrogenase (decarboxylating) subunit 1; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: LFA_0172
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage complex lipoylprotein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: LFA_0173
symbol: gcvT
gene_biotype: protein_coding
description:
  Aminomethyltransferase, tetrahydrofolate-dependent, subunit (T protein) of glycine cleavage complex; The glycine cleavage system catalyzes the degradation of glycine.


ensembl_gene_id: LFA_0175
symbol: LFA_0175
gene_biotype: protein_coding
description:
  Putative IcmL; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_0181
symbol: yihA
gene_biotype: protein_coding
description:
  GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: LFA_0184
symbol: acs
gene_biotype: protein_coding
description:
  acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.


ensembl_gene_id: LFA_0185
symbol: hibA
gene_biotype: protein_coding
description:
  Putative 3-hydroxyisobutyrate dehydrogenase, mitochondrial; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the HIBADH-related family.


ensembl_gene_id: LFA_0189
symbol: dapB
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: LFA_0190
symbol: LFA_0190
gene_biotype: protein_coding
description:
  Conserved protein of unknown function; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family.


ensembl_gene_id: LFA_0197
symbol: pgk
gene_biotype: protein_coding
description:
  Phosphoglycerate kinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the phosphoglycerate kinase family.


ensembl_gene_id: LFA_0198
symbol: epd
gene_biotype: protein_coding
description:
  D-erythrose 4-phosphate dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: LFA_0199
symbol: tktA
gene_biotype: protein_coding
description:
  Transketolase 1, thiamin-binding; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.


ensembl_gene_id: LFA_0203
symbol: int
gene_biotype: protein_coding
description:
  Integrase; Function of strongly homologous gene; extrachromosomal origin; Belongs to the 'phage' integrase family.


ensembl_gene_id: LFA_0204
symbol: LFA_0204
gene_biotype: protein_coding
description:
  Putative protein with box helicase and with type III restriction enzyme motif; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_0212
symbol: LFA_0212
gene_biotype: protein_coding
description:
  Exported protein of unknown function [Pentapeptide repeat]; No homology to any previously reported sequences.


ensembl_gene_id: LFA_0216
symbol: LFA_0216
gene_biotype: protein_coding
description:
  Conserved protein of unknown function [ATPase, AAA-4]; Homologs of previously reported genes of unknown function.


ensembl_gene_id: LFA_0218
symbol: LFA_0218
gene_biotype: protein_coding
description:
  Putative Transcriptional regulator, TetR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.


ensembl_gene_id: LFA_0226
symbol: LFA_0226
gene_biotype: protein_coding
description:
  Conserved protein of unknown function[macro domain-like]; Homologs of previously reported genes of unknown function.


ensembl_gene_id: LFA_0238
symbol: LFA_0238
gene_biotype: protein_coding
description:
  Putative arsenate reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the ArsC family.


ensembl_gene_id: LFA_0239
symbol: LFA_0239
gene_biotype: protein_coding
description:
  Conserved exported protein of unknown function [Glycoside hydrolase domain]; Homologs of previously reported genes of unknown function.


ensembl_gene_id: LFA_0241
symbol: LFA_0241
gene_biotype: protein_coding
description:
  Putative Uridine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_0243
symbol: LFA_0243
gene_biotype: protein_coding
description:
  Putative Bacterial extracellular solute-binding family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.


ensembl_gene_id: LFA_0244
symbol: LFA_0244
gene_biotype: protein_coding
description:
  Putative protein translocase subunit SecA [5 coiled-coil domains]; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.


ensembl_gene_id: LFA_0251
symbol: LFA_0251
gene_biotype: protein_coding
description:
  Putative HAD-superfamily hydrolase subfamily IA, variant 3; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_0257
symbol: LFA_0257
gene_biotype: protein_coding
description:
  Putative FAD/FMN-containing dehydrogenases; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_0262
symbol: fur
gene_biotype: protein_coding
description:
  Fe2 /Zn2 uptake regulation protein; Function of strongly homologous gene; regulator; Belongs to the Fur family.


ensembl_gene_id: LFA_0263
symbol: LFA_0263
gene_biotype: protein_coding
description:
  Protein of unknown function [8 coiled-coil domains]; No homology to any previously reported sequences.


ensembl_gene_id: LFA_0265
symbol: ung
gene_biotype: protein_coding
description:
  Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: LFA_0269
symbol: catQ
gene_biotype: protein_coding
description:
  Chloramphenicol acetyltransferase; This enzyme is an effector of chloramphenicol resistance in bacteria; Belongs to the chloramphenicol acetyltransferase family.


ensembl_gene_id: LFA_0270
symbol: LFA_0270
gene_biotype: protein_coding
description:
  Putative short-chain dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_0274
symbol: LFA_0274
gene_biotype: protein_coding
description:
  Adenylyltransferase and sulfurtransferase MOCS3 [Includes: Molybdopterin-synthase adenylyltransferase; Molybdopterin-synthase sulfurtransferase].


ensembl_gene_id: LFA_0277
symbol: LFA_0277
gene_biotype: protein_coding
description:
  Putative OmpA-like transmembrane domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; membrane component.


ensembl_gene_id: LFA_0284
symbol: LFA_0284
gene_biotype: protein_coding
description:
  Protein of unknown function [FAD/NAD(P)-binding domain]; No homology to any previously reported sequences.


ensembl_gene_id: LFA_0288
symbol: LFA_0288
gene_biotype: protein_coding
description:
  Conserved exported protein of unknown function [amidase domain]; Homologs of previously reported genes of unknown function.


ensembl_gene_id: LFA_0290
symbol: LFA_0290
gene_biotype: protein_coding
description:
  Conserved protein of unknown function [coiled-coil domain]; Homologs of previously reported genes of unknown function.


ensembl_gene_id: LFA_0292
symbol: LFA_0292
gene_biotype: protein_coding
description:
  Protein of unknown function [F-BOX/LEUCINE RICH REPEAT PROTEIN]; No homology to any previously reported sequences.


ensembl_gene_id: LFA_0293
symbol: LFA_0293
gene_biotype: protein_coding
description:
  Protein of unknown function [Cu-oxidase_2 domain]; No homology to any previously reported sequences.


ensembl_gene_id: LFA_0294
symbol: LFA_0294
gene_biotype: protein_coding
description:
  Formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily.


ensembl_gene_id: LFA_0296
symbol: ydfG
gene_biotype: protein_coding
description:
  NADP-dependent L-serine/L-allo-threonine dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: LFA_0299
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family.


ensembl_gene_id: LFA_0300
symbol: yjeK
gene_biotype: protein_coding
description:
  Putative lysine aminomutase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_0301
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: LFA_0307
symbol: LFA_0307
gene_biotype: protein_coding
description:
  Aminoglycoside phosphotransferase involved in cell wall biosynthesis; Function of strongly homologous gene; enzyme.


ensembl_gene_id: LFA_0308
symbol: lptD
gene_biotype: protein_coding
description:
  LPS-assembly protein LptD; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.


ensembl_gene_id: LFA_0309
symbol: surA
gene_biotype: protein_coding
description:
  Chaperone SurA; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation.


ensembl_gene_id: LFA_0310
symbol: pdxA
gene_biotype: protein_coding
description:
  4-hydroxy-L-threonine phosphate dehydrogenase, NAD-dependent; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).


ensembl_gene_id: LFA_0311
symbol: folA
gene_biotype: protein_coding
description:
  Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: LFA_0316
symbol: rsgA
gene_biotype: protein_coding
description:
  Putative ribosome biogenesis GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: LFA_0317
symbol: cca
gene_biotype: protein_coding
description:
  Fused tRNA nucleotidyl transferase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases.


ensembl_gene_id: LFA_0318
symbol: orn
gene_biotype: protein_coding
description:
  Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family.


ensembl_gene_id: LFA_0319
symbol: queH
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: LFA_0323
symbol: LFA_0323
gene_biotype: protein_coding
description:
  Conserved protein of unknown function; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: LFA_0324
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: LFA_0331
symbol: dsbB
gene_biotype: protein_coding
description:
  Disulfide bond formation protein B; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family.


ensembl_gene_id: LFA_0332
symbol: LFA_0332
gene_biotype: protein_coding
description:
  Protein of unknown function [14 coiled-coil domains]; No homology to any previously reported sequences.


ensembl_gene_id: LFA_0333
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: LFA_0334
symbol: ppiB
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase B (rotamase B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: LFA_0339
symbol: LFA_0339
gene_biotype: protein_coding
description:
  Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.


ensembl_gene_id: LFA_0340
symbol: LFA_0340
gene_biotype: protein_coding
description:
  Putative Acylglycerol lipase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_0342
symbol: LFA_0342
gene_biotype: protein_coding
description:
  Acetylornithine transaminase; Function of strongly homologous gene; enzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: LFA_0348
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: LFA_0349
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: LFA_0351
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20, also posttranslational autoregulator; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: LFA_0352
symbol: pheS
gene_biotype: protein_coding
description:
  Phenylalanine tRNA synthetase, alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: LFA_0353
symbol: pheT
gene_biotype: protein_coding
description:
  Phenylalanine tRNA synthetase, beta subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: LFA_0354
symbol: ihfA
gene_biotype: protein_coding
description:
  Integration host factor (IHF), DNA-binding protein, alpha subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: LFA_0356
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: LFA_0357
symbol: rpsI
gene_biotype: protein_coding
description:
  30S ribosomal subunit protein S9; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the universal ribosomal protein uS9 family.


ensembl_gene_id: LFA_0358
symbol: petA
gene_biotype: protein_coding
description:
  Ubiquinol-cytochrome c reductase iron-sulfur subunit; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: LFA_0359
symbol: petB
gene_biotype: protein_coding
description:
  Cytochrome b; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.


ensembl_gene_id: LFA_0361
symbol: sspA
gene_biotype: protein_coding
description:
  Stringent starvation protein A; Function of homologous gene experimentally demonstrated in an other organism; regulator; Belongs to the GST superfamily.


ensembl_gene_id: LFA_0363
symbol: yjeF
gene_biotype: protein_coding
description:
  Putative carbohydrate kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of  [...]


ensembl_gene_id: LFA_0364
symbol: yjeE
gene_biotype: protein_coding
description:
  ATPase with strong ADP affinity; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_0367
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: LFA_0368
symbol: miaA
gene_biotype: protein_coding
description:
  Delta(2)-isopentenylpyrophosphate tRNA-adenosine transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: LFA_0376
symbol: icmV
gene_biotype: protein_coding
description:
  Component of the Dot/Icm secretion system; Function of strongly homologous gene; membrane component.


ensembl_gene_id: LFA_0385
symbol: yadG
gene_biotype: protein_coding
description:
  Putative transporter subunit: ATP-binding component of ABC superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.


ensembl_gene_id: LFA_0388
symbol: LFA_0388
gene_biotype: protein_coding
description:
  Putative cyanophycin synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_0392
symbol: LFA_0392
gene_biotype: protein_coding
description:
  Putative cyanophycin synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_0395
symbol: dotC
gene_biotype: protein_coding
description:
  Component of the Dot/Icm secretion system. Lipoprotein; Function of strongly homologous gene; membrane component.


ensembl_gene_id: LFA_0396
symbol: dotD
gene_biotype: protein_coding
description:
  Component of the Dot/Icm secretion system. Lipoprotein; Function of strongly homologous gene; structure.


ensembl_gene_id: LFA_0397
symbol: yhhF
gene_biotype: protein_coding
description:
  Putative methyltransferase; Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle; Belongs to the methyltransferase superfamily. RsmD family.


ensembl_gene_id: LFA_0398
symbol: LFA_0398
gene_biotype: protein_coding
description:
  Putative Peptidase M16; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_0400
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.


ensembl_gene_id: LFA_0401
symbol: ftsE
gene_biotype: protein_coding
description:
  Transporter subunit: ATP-binding component of ABC superfamily; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: LFA_0402
symbol: ftsX
gene_biotype: protein_coding
description:
  Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: LFA_0404
symbol: rpoH
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 32 (sigma H) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.


ensembl_gene_id: LFA_0405
symbol: LFA_0405
gene_biotype: protein_coding
description:
  Putative alpha/beta hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_0409
symbol: LFA_0409
gene_biotype: protein_coding
description:
  Non-ribosomal peptide synthetase terminal domain protein; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: LFA_0412
symbol: panC
gene_biotype: protein_coding
description:
  Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: LFA_0413
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: LFA_0414
symbol: LFA_0414
gene_biotype: protein_coding
description:
  Homologs of previously reported genes of unknown function; Belongs to the major facilitator superfamily.


ensembl_gene_id: LFA_0419
symbol: feoB
gene_biotype: protein_coding
description:
  Fused ferrous iron transporter, protein B: GTP-binding protein; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: LFA_0423
symbol: sdhC
gene_biotype: protein_coding
description:
  Succinate dehydrogenase, membrane subunit, binds cytochrome b556; Function of homologous gene experimentally demonstrated in an other organism; membrane component.


ensembl_gene_id: LFA_0424
symbol: sdhD
gene_biotype: protein_coding
description:
  Succinate dehydrogenase hydrophobic membrane anchor subunit; Membrane-anchoring subunit of succinate dehydrogenase (SDH).


ensembl_gene_id: LFA_0425
symbol: sdhA
gene_biotype: protein_coding
description:
  Succinate dehydrogenase, flavoprotein subunit; Function of homologous gene experimentally demonstrated in an other organism; carrier; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.


ensembl_gene_id: LFA_0426
symbol: sdhB
gene_biotype: protein_coding
description:
  Succinate dehydrogenase, iron-sulfur subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_0428
symbol: sucA
gene_biotype: protein_coding
description:
  2-oxoglutarate decarboxylase, thiamin-requiring; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_0429
symbol: sucB
gene_biotype: protein_coding
description:
  Dihydrolipoyltranssuccinase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: LFA_0430
symbol: sucC
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase beta chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: LFA_0431
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase alpha chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: LFA_0433
symbol: pdxH
gene_biotype: protein_coding
description:
  Pyridoxine/pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).


ensembl_gene_id: LFA_0444
symbol: LFA_0444
gene_biotype: protein_coding
description:
  Transcriptional regulator SkgA, mercury resistance (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.


ensembl_gene_id: LFA_0445
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase (Phosphoribosyl pyrophosphate synthetase); Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: LFA_0447
symbol: lolB
gene_biotype: protein_coding
description:
  Outer membrane lipoprotein LolB; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.


ensembl_gene_id: LFA_0448
symbol: coaD
gene_biotype: protein_coding
description:
  Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: LFA_0451
symbol: mutM
gene_biotype: protein_coding
description:
  Formamidopyrimidine/5-formyluracil/ 5-hydroxymethyluracil DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: LFA_0455
symbol: fabG
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_0457
symbol: LFA_0457
gene_biotype: protein_coding
description:
  Putative Polyhydroxyalkanoate synthesis repressor PhaR; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.


ensembl_gene_id: LFA_0463
symbol: tyrS
gene_biotype: protein_coding
description:
  Tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.


ensembl_gene_id: LFA_0472
symbol: LFA_0472
gene_biotype: protein_coding
description:
  Putative disulfide bond formation protein DsbB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.


ensembl_gene_id: LFA_0474
symbol: LFA_0474
gene_biotype: protein_coding
description:
  Protein of unknown function [Ankyrin repeat]; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_0483
symbol: LFA_0483
gene_biotype: protein_coding
description:
  Putative toxin higB-1, plasmid maintenance system killer protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; factor.


ensembl_gene_id: LFA_0484
symbol: LFA_0484
gene_biotype: protein_coding
description:
  Conserved protein of unknown function [Lambda repressor-like, DNA-binding]; Homologs of previously reported genes of unknown function.


ensembl_gene_id: LFA_0486
symbol: LFA_0486
gene_biotype: protein_coding
description:
  Putative addiction module antitoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.


ensembl_gene_id: LFA_0492
symbol: LFA_0492
gene_biotype: protein_coding
description:
  Conserved protein of unknown function [ankyrin domain]; Homologs of previously reported genes of unknown function.


ensembl_gene_id: LFA_0504
symbol: LFA_0504
gene_biotype: protein_coding
description:
  Protein of unknown function [Pentapeptide repeat][putative F-box domain]; No homology to any previously reported sequences.


ensembl_gene_id: LFA_0506
symbol: LFA_0506
gene_biotype: protein_coding
description:
  Conserved protein of unknown function [Helix-turn-helix type 3 domain]; Homologs of previously reported genes of unknown function.


ensembl_gene_id: LFA_0509
symbol: LFA_0509
gene_biotype: protein_coding
description:
  Surface protein bspA-like (TvBspA-like-625) (fragment); Function of strongly homologous gene; structure.


ensembl_gene_id: LFA_0513
symbol: ybcJ
gene_biotype: protein_coding
description:
  Putative RNA-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.


ensembl_gene_id: LFA_0526
symbol: LFA_0526
gene_biotype: protein_coding
description:
  UbiE/COQ5 family methlytransferase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.


ensembl_gene_id: LFA_0530
symbol: LFA_0530
gene_biotype: protein_coding
description:
  Protein of unknown function [Leucine-rich repeat]; No homology to any previously reported sequences.


ensembl_gene_id: LFA_0544
symbol: LFA_0544
gene_biotype: protein_coding
description:
  Conserved protein of unknown function (putative substrate of the Dot/Icm secretion system); Homologs of previously reported genes of unknown function.


ensembl_gene_id: LFA_0545
symbol: LFA_0545
gene_biotype: protein_coding
description:
  Protein of unknown function [LEUCINE RICH REPEAT-CONTAINING]; No homology to any previously reported sequences.


ensembl_gene_id: LFA_0547
symbol: rlpA
gene_biotype: protein_coding
description:
  Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: LFA_0549
symbol: gsiA
gene_biotype: protein_coding
description:
  Nickel-transporting ATPase; Function of strongly homologous gene; enzyme; Belongs to the ABC transporter superfamily.


ensembl_gene_id: LFA_0552
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]


ensembl_gene_id: LFA_0553
symbol: LFA_0553
gene_biotype: protein_coding
description:
  Homologs of previously reported genes of unknown function; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: LFA_0557
symbol: LFA_0557
gene_biotype: protein_coding
description:
  Cellulase; Function of strongly homologous gene; enzyme; Belongs to the glycosyl hydrolase 5 (cellulase A) family.


ensembl_gene_id: LFA_0558
symbol: ttcA
gene_biotype: protein_coding
description:
  tRNA 2-thiocytidine biosynthesis protein TtcA; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system.


ensembl_gene_id: LFA_0563
symbol: kbl
gene_biotype: protein_coding
description:
  Glycine C-acetyltransferase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.


ensembl_gene_id: LFA_0564
symbol: tdh
gene_biotype: protein_coding
description:
  Threonine 3-dehydrogenase, NAD(P)-binding; Catalyzes the NAD(+)-dependent oxidation of L-threonine to 2- amino-3-ketobutyrate; Belongs to the zinc-containing alcohol dehydrogenase family.


ensembl_gene_id: LFA_0565
symbol: yjjK
gene_biotype: protein_coding
description:
  Fused putative transporter subunits of ABC superfamily: ATP-binding components; Function of strongly homologous gene; putative transporter.


ensembl_gene_id: LFA_0571
symbol: hutG
gene_biotype: protein_coding
description:
  Formimidoylglutamase; Catalyzes the conversion of N-formimidoyl-L-glutamate to L- glutamate and formamide; Belongs to the arginase family.


ensembl_gene_id: LFA_0582
symbol: LFA_0582
gene_biotype: protein_coding
description:
  Putative Lytic transglycosylase-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_0588
symbol: LFA_0588
gene_biotype: protein_coding
description:
  Putative Cellulose synthase BcsB; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.


ensembl_gene_id: LFA_0592
symbol: LFA_0592
gene_biotype: protein_coding
description:
  Conserved exported protein of unknown function [TPR Domain containing protein]; Homologs of previously reported genes of unknown function.


ensembl_gene_id: LFA_0593
symbol: LFA_0593
gene_biotype: protein_coding
description:
  Conserved exported protein of unknown function [ATP-grasp fold]; Homologs of previously reported genes of unknown function.


ensembl_gene_id: LFA_0594
symbol: LFA_0594
gene_biotype: protein_coding
description:
  Putative phosphoglycerate mutase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the phosphoglycerate mutase family.


ensembl_gene_id: LFA_0595
symbol: LFA_0595
gene_biotype: protein_coding
description:
  Putative response regulator receiver protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.


ensembl_gene_id: LFA_0596
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: LFA_0597
symbol: LFA_0597
gene_biotype: protein_coding
description:
  Putative regulator of chromosome condensation, RCC1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.


ensembl_gene_id: LFA_0606
symbol: lepB
gene_biotype: protein_coding
description:
  Effector protein B, substrate of the Dot/Icm secretion system; Function of strongly homologous gene; factor.


ensembl_gene_id: LFA_0611
symbol: LFA_0611
gene_biotype: protein_coding
description:
  Putative Xenobiotic-transporting ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_0613
symbol: LFA_0613
gene_biotype: protein_coding
description:
  Putative Membrane-fusion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_0619
symbol: LFA_0619
gene_biotype: protein_coding
description:
  Putative Alcohol dehydrogenase GroES-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_0622
symbol: LFA_0622
gene_biotype: protein_coding
description:
  Putative Glyoxalase/Bleomycin resistance protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_0623
symbol: LFA_0623
gene_biotype: protein_coding
description:
  Putative isochorismatase hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_0624
symbol: LFA_0624
gene_biotype: protein_coding
description:
  Putative amidohydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_0626
symbol: LFA_0626
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family; Function of strongly homologous gene; regulator; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: LFA_0627
symbol: LFA_0627
gene_biotype: protein_coding
description:
  Conserved protein of unknown function [ Pirin domain]; Homologs of previously reported genes of unknown function; Belongs to the pirin family.


ensembl_gene_id: LFA_0628
symbol: LFA_0628
gene_biotype: protein_coding
description:
  Putative hydrolase (similar to SdbA protein, putative substrate of the Dot/Icm system); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_0631
symbol: LFA_0631
gene_biotype: protein_coding
description:
  Multidrug resistance efflux pum, Secretion protein HlyD; Function of strongly homologous gene; transporter; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: LFA_0632
symbol: LFA_0632
gene_biotype: protein_coding
description:
  Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_0633
symbol: LFA_0633
gene_biotype: protein_coding
description:
  Outer membrane efflux protein; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.


ensembl_gene_id: LFA_0635
symbol: yahK
gene_biotype: protein_coding
description:
  Putative oxidoreductase, Zn-dependent and NAD(P)-binding; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_0642
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: LFA_0644
symbol: LFA_0644
gene_biotype: protein_coding
description:
  Putative ABC transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_0646
symbol: gpo
gene_biotype: protein_coding
description:
  Glutathione peroxidase; Function of strongly homologous gene; enzyme; Belongs to the glutathione peroxidase family.


ensembl_gene_id: LFA_0648
symbol: LFA_0648
gene_biotype: protein_coding
description:
  Putative LysR-family transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: LFA_0652
symbol: LFA_0652
gene_biotype: protein_coding
description:
  ATP-dependent DNA ligase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.


ensembl_gene_id: LFA_0653
symbol: LFA_0653
gene_biotype: protein_coding
description:
  Protein of unknown function [Peptidase_C80 domain]; No homology to any previously reported sequences.


ensembl_gene_id: LFA_0657
symbol: LFA_0657
gene_biotype: protein_coding
description:
  Putative nitronate monooxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_0658
symbol: LFA_0658
gene_biotype: protein_coding
description:
  Putative methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_0671
symbol: LFA_0671
gene_biotype: protein_coding
description:
  Putative ribose/galactose isomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_0689
symbol: LFA_0689
gene_biotype: protein_coding
description:
  Exported protein of unknown function [leucine rich repeat]; No homology to any previously reported sequences.


ensembl_gene_id: LFA_0693
symbol: LFA_0693
gene_biotype: protein_coding
description:
  Protein of unknown function [ankyrin domain][F-box domain]; No homology to any previously reported sequences.


ensembl_gene_id: LFA_0695
symbol: LFA_0695
gene_biotype: protein_coding
description:
  Protein of unknown function [AhpD domain]; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: LFA_0696
symbol: LFA_0696
gene_biotype: protein_coding
description:
  Conserved protein of unknown function [Pirin domain]; Homologs of previously reported genes of unknown function; Belongs to the pirin family.


ensembl_gene_id: LFA_0703
symbol: LFA_0703
gene_biotype: protein_coding
description:
  Diguanylate cyclase with Serine/threonine-protein kinase-like domain; Function of strongly homologous gene; enzyme.


ensembl_gene_id: LFA_0708
symbol: LFA_0708
gene_biotype: protein_coding
description:
  Putative quinone oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_0719
symbol: LFA_0719
gene_biotype: protein_coding
description:
  Putative Cysteine-S-conjugate beta-lyase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_0721
symbol: LFA_0721
gene_biotype: protein_coding
description:
  Homologs of previously reported genes of unknown function; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: LFA_0726
symbol: LFA_0726
gene_biotype: protein_coding
description:
  Putative naringenin-chalcone synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_0732
symbol: ompR
gene_biotype: protein_coding
description:
  DNA-binding response regulator in two-component regulatory system with EnvZ; Function of homologous gene experimentally demonstrated in an other organism; regulator.


ensembl_gene_id: LFA_0733
symbol: LFA_0733
gene_biotype: protein_coding
description:
  Putative sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_0734
symbol: pfp
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.


ensembl_gene_id: LFA_0736
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: LFA_0750
symbol: kefC
gene_biotype: protein_coding
description:
  Glutathione-regulated potassium-efflux system protein KefC; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: LFA_0752
symbol: LFA_0752
gene_biotype: protein_coding
description:
  Putative SEC-C motif domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.


ensembl_gene_id: LFA_0756
symbol: mdtB
gene_biotype: protein_coding
description:
  Multidrug efflux system, subunit B; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: LFA_0757
symbol: mdtC
gene_biotype: protein_coding
description:
  Multidrug efflux system, subunit C; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: LFA_0774
symbol: cysNC
gene_biotype: protein_coding
description:
  Bifunctional enzyme CysN/CysC [Includes: Sulfate adenylyltransferase subunit 1; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.


ensembl_gene_id: LFA_0781
symbol: nemA
gene_biotype: protein_coding
description:
  N-ethylmaleimide reductase, FMN-linked; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_0786
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator homolog; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s).


ensembl_gene_id: LFA_0787
symbol: LFA_0787
gene_biotype: protein_coding
description:
  UDP-glucose 6-dehydrogenase; Function of strongly homologous gene; enzyme; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: LFA_0791
symbol: LFA_0791
gene_biotype: protein_coding
description:
  Putative dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.


ensembl_gene_id: LFA_0793
symbol: wbjD
gene_biotype: protein_coding
description:
  UDP-2-acetamido-2,6-dideoxy-beta-L-talose 2-epimerase WbjD; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: LFA_0794
symbol: LFA_0794
gene_biotype: protein_coding
description:
  Putative O-antigen chain length regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.


ensembl_gene_id: LFA_0809
symbol: pgi
gene_biotype: protein_coding
description:
  Peptide chain release factor 3 (RF-3) (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the GPI family.


ensembl_gene_id: LFA_0810
symbol: rdoA
gene_biotype: protein_coding
description:
  Protein RdoA; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response.


ensembl_gene_id: LFA_0812
symbol: birA
gene_biotype: protein_coding
description:
  Biotin operon repressor/biotin-(Acetyl-CoA-carboxylase) synthetase BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon.


ensembl_gene_id: LFA_0814
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, carboxytransferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: LFA_0815
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine.


ensembl_gene_id: LFA_0816
symbol: LFA_0816
gene_biotype: protein_coding
description:
  Putative major facilitator superfamily (MFS) transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_0817
symbol: LFA_0817
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase. DD-peptidase. DD-transpeptidase; Function of strongly homologous gene; enzyme.


ensembl_gene_id: LFA_0818
symbol: tdcG
gene_biotype: protein_coding
description:
  L-serine dehydratase 3; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the iron-sulfur dependent L-serine dehydratase family.


ensembl_gene_id: LFA_0830
symbol: LFA_0830
gene_biotype: protein_coding
description:
  Putative ABC transporter (Permease); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_0832
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: LFA_0837
symbol: LFA_0837
gene_biotype: protein_coding
description:
  Putative C-di-GMP-specific phosphodiesterase protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_0840
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: LFA_0842
symbol: purB
gene_biotype: protein_coding
description:
  Adenylosuccinate lyase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: LFA_0844
symbol: yvdB
gene_biotype: protein_coding
description:
  Putative sulfate transporter YvdB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_0845
symbol: pps
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: LFA_0848
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: LFA_0854
symbol: mreB
gene_biotype: protein_coding
description:
  Rod shape-determining protein; Function of homologous gene experimentally demonstrated in an other organism; phenotype.


ensembl_gene_id: LFA_0857
symbol: ymfC
gene_biotype: protein_coding
description:
  23S rRNA pseudouridine synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: LFA_0861
symbol: icd
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_0862
symbol: clpS
gene_biotype: protein_coding
description:
  Regulatory protein for ClpA substrate specificity; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: LFA_0863
symbol: clpA
gene_biotype: protein_coding
description:
  ATP-binding protease component; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the ClpA/ClpB family.


ensembl_gene_id: LFA_0868
symbol: thiD
gene_biotype: protein_coding
description:
  Bifunctional hydroxy-methylpyrimidine kinase and hydroxy-phosphomethylpyrimidine kinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_0869
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: LFA_0870
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate synthase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: LFA_0872
symbol: LFA_0872
gene_biotype: protein_coding
description:
  Putative rhomboid family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_0874
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease 7 large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: LFA_0877
symbol: LFA_0877
gene_biotype: protein_coding
description:
  Homologs of previously reported genes of unknown function; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: LFA_0881
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: LFA_0882
symbol: pabA
gene_biotype: protein_coding
description:
  Aminodeoxychorismate synthase, subunit II; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_0884
symbol: LFA_0884
gene_biotype: protein_coding
description:
  Conserved exported protein of unknown function [OmpA_membrane]; Homologs of previously reported genes of unknown function; Belongs to the outer membrane OOP (TC 1.B.6) superfamily.


ensembl_gene_id: LFA_0887
symbol: fabV
gene_biotype: protein_coding
description:
  Trans-2-enoyl-CoA reductase (NAD(+)); Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon- carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP); Belongs to the TER reductase family.


ensembl_gene_id: LFA_0889
symbol: LFA_0889
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase and Beta-ketoacyl synthase, active site; Function of strongly homologous gene; enzyme.


ensembl_gene_id: LFA_0892
symbol: LFA_0892
gene_biotype: protein_coding
description:
  Putative lipopolysaccharide transport protein B (ABC superfamily, atp_bind) (LptB); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.


ensembl_gene_id: LFA_0893
symbol: LFA_0893
gene_biotype: protein_coding
description:
  Putative conserved hypothetical protein OstA family; Homologs of previously reported genes of unknown function.


ensembl_gene_id: LFA_0895
symbol: kdsC
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8- phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate; Belongs to the KdsC family.


ensembl_gene_id: LFA_0896
symbol: kdsD
gene_biotype: protein_coding
description:
  D-arabinose 5-phosphate isomerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_0897
symbol: ttg2A
gene_biotype: protein_coding
description:
  Toluene tolerance efflux transporter (ABC superfamily, atp_bind); Function of strongly homologous gene; transporter.


ensembl_gene_id: LFA_0898
symbol: yrbE
gene_biotype: protein_coding
description:
  Toluene transporter subunit: membrane component of ABC superfamily; Function of strongly homologous gene; transporter.


ensembl_gene_id: LFA_0899
symbol: LFA_0899
gene_biotype: protein_coding
description:
  Putative ABC transporter-binding protein HI_1085; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_0901
symbol: LFA_0901
gene_biotype: protein_coding
description:
  Putative anti-sigma-B factor antagonist (Anti-anti-sigma-B factor); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.


ensembl_gene_id: LFA_0903
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: LFA_0915
symbol: sohB
gene_biotype: protein_coding
description:
  Putative protease SohB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_0916
symbol: ccmA
gene_biotype: protein_coding
description:
  Cytochrome c biogenesis ATP-binding export protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.


ensembl_gene_id: LFA_0917
symbol: ccmB
gene_biotype: protein_coding
description:
  Heme exporter subunit; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family.


ensembl_gene_id: LFA_0922
symbol: ccmC
gene_biotype: protein_coding
description:
  Heme exporter subunit; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.


ensembl_gene_id: LFA_0923
symbol: LFA_0923
gene_biotype: protein_coding
description:
  Heme exporter protein CcmD (fragment); Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family.


ensembl_gene_id: LFA_0924
symbol: ccmE
gene_biotype: protein_coding
description:
  Periplasmic heme chaperone; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.


ensembl_gene_id: LFA_0925
symbol: ccmF
gene_biotype: protein_coding
description:
  Heme lyase, CcmF subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_0926
symbol: ccmG
gene_biotype: protein_coding
description:
  Periplasmic thioredoxin of cytochrome c-type biogenesis; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_0930
symbol: LFA_0930
gene_biotype: protein_coding
description:
  Putative 3-methyladenine DNA glycosylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the DNA glycosylase MPG family.


ensembl_gene_id: LFA_0937
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor RF-3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: LFA_0940
symbol: pntB
gene_biotype: protein_coding
description:
  Pyridine nucleotide transhydrogenase, beta subunit; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.


ensembl_gene_id: LFA_0956
symbol: LFA_0956
gene_biotype: protein_coding
description:
  Sodium:dicarboxylate symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: LFA_0957
symbol: dapE
gene_biotype: protein_coding
description:
  Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.


ensembl_gene_id: LFA_0958
symbol: dapD
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the transferase hexapeptide repeat family.


ensembl_gene_id: LFA_0962
symbol: kmo
gene_biotype: protein_coding
description:
  Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily.


ensembl_gene_id: LFA_0967
symbol: LFA_0967
gene_biotype: protein_coding
description:
  Putative O-demethylpuromycin-O-methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_0969
symbol: LFA_0969
gene_biotype: protein_coding
description:
  Sel-1 protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative receptor.


ensembl_gene_id: LFA_0972
symbol: LFA_0972
gene_biotype: protein_coding
description:
  Putative asmA protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.


ensembl_gene_id: LFA_0978
symbol: HSD17B
gene_biotype: protein_coding
description:
  3-hydroxyacyl-CoA dehydrogenase type-2; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: LFA_0979
symbol: LFA_0979
gene_biotype: protein_coding
description:
  Putative flagella synthesis protein FlgN; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.


ensembl_gene_id: LFA_0981
symbol: flgA
gene_biotype: protein_coding
description:
  Flagella basal body P-ring formation protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.


ensembl_gene_id: LFA_0983
symbol: LFA_0983
gene_biotype: protein_coding
description:
  Putative Enhanced entry protein EnhA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; cell process.


ensembl_gene_id: LFA_0984
symbol: coaX
gene_biotype: protein_coding
description:
  Type III pantothenate kinase (Pantothenic acid kinase) (PanK-III); Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: LFA_0986
symbol: mraW
gene_biotype: protein_coding
description:
  S-adenosyl-dependent methyltransferase activity on membrane-located substrates; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: LFA_0987
symbol: ftsL
gene_biotype: protein_coding
description:
  Cell division protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: LFA_0988
symbol: ftsI
gene_biotype: protein_coding
description:
  Transpeptidase involved in septal peptidoglycan synthesis (penicillin-binding protein 3); Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily.


ensembl_gene_id: LFA_0989
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: LFA_0990
symbol: pdxB
gene_biotype: protein_coding
description:
  Erythronate-4-phosphate dehydrogenase; Catalyzes the oxidation of erythronate-4-phosphate to 3- hydroxy-2-oxo-4-phosphonooxybutanoate.


ensembl_gene_id: LFA_0994
symbol: LFA_0994
gene_biotype: protein_coding
description:
  Putative membrane-associated phospholipid phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_1000
symbol: LFA_1000
gene_biotype: protein_coding
description:
  Putative endonuclease containing a URI domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_1001
symbol: mrcA
gene_biotype: protein_coding
description:
  Fused penicillin-binding protein 1a: murein transglycosylase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_1009
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase I; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: LFA_1010
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: LFA_1013
symbol: ribF
gene_biotype: protein_coding
description:
  Bifunctional riboflavin kinase and FAD synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the ribF family.


ensembl_gene_id: LFA_1014
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: LFA_1015
symbol: lspA
gene_biotype: protein_coding
description:
  Prolipoprotein signal peptidase (signal peptidase II); This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: LFA_1017
symbol: LFA_1017
gene_biotype: protein_coding
description:
  Putative 2-dehydro-3-deoxy-phosphogluconate aldolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_1020
symbol: era
gene_biotype: protein_coding
description:
  Membrane-associated, 16S rRNA-binding GTPase; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: LFA_1022
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: LFA_1027
symbol: LFA_1027
gene_biotype: protein_coding
description:
  Oxidoreductase, short chain dehydrogenase/reductase family; Function of strongly homologous gene; enzyme.


ensembl_gene_id: LFA_1028
symbol: LFA_1028
gene_biotype: protein_coding
description:
  Putative oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_1030
symbol: LFA_1030
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.


ensembl_gene_id: LFA_1031
symbol: LFA_1031
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.


ensembl_gene_id: LFA_1033
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: LFA_1034
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: LFA_1035
symbol: fliR
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein fliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: LFA_1036
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar export pore protein; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: LFA_1037
symbol: flhA
gene_biotype: protein_coding
description:
  Putative flagellar export pore protein; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: LFA_1040
symbol: fliA
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.


ensembl_gene_id: LFA_1042
symbol: motB
gene_biotype: protein_coding
description:
  Putative flagellar motor protein MotD; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_1044
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: LFA_1045
symbol: lysS
gene_biotype: protein_coding
description:
  Lysine tRNA synthetase, constitutive; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: LFA_1051
symbol: nrdB
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase, beta subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.


ensembl_gene_id: LFA_1052
symbol: nrdA
gene_biotype: protein_coding
description:
  Ribonucleoside diphosphate reductase, alpha subunit; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: LFA_1057
symbol: infA
gene_biotype: protein_coding
description:
  Protein chain initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: LFA_1058
symbol: LFA_1058
gene_biotype: protein_coding
description:
  Proton/sodium-glutamate symport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: LFA_1061
symbol: LFA_1061
gene_biotype: protein_coding
description:
  Putative adenylate cyclase 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_1062
symbol: aat
gene_biotype: protein_coding
description:
  leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: LFA_1063
symbol: LFA_1063
gene_biotype: protein_coding
description:
  Putative Glycine-rich protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; lipoprotein.


ensembl_gene_id: LFA_1068
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: LFA_1069
symbol: proA
gene_biotype: protein_coding
description:
  Gamma-glutamylphosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: LFA_1081
symbol: trxB
gene_biotype: protein_coding
description:
  Thioredoxin reductase 1; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_1083
symbol: lolA
gene_biotype: protein_coding
description:
  Outer-membrane lipoprotein carrier protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: LFA_1084
symbol: ycaJ
gene_biotype: protein_coding
description:
  Recombination protein; Function of homologous gene experimentally demonstrated in an other organism; cell process.


ensembl_gene_id: LFA_1088
symbol: LFA_1088
gene_biotype: protein_coding
description:
  Flagellar M-ring protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: LFA_1089
symbol: fliG
gene_biotype: protein_coding
description:
  Flagellar motor switching and energizing component; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.


ensembl_gene_id: LFA_1091
symbol: fliI
gene_biotype: protein_coding
description:
  Flagellum-specific ATP synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_1095
symbol: mpl
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate. Belongs to the MurCDEF family. Mpl subfamily.


ensembl_gene_id: LFA_1105
symbol: yajQ
gene_biotype: protein_coding
description:
  Putative nucleotide binding protein (UPF0234 protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor; Belongs to the UPF0234 family.


ensembl_gene_id: LFA_1107
symbol: LFA_1107
gene_biotype: protein_coding
description:
  Putative Phytase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_1118
symbol: ribD
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: LFA_1120
symbol: ribBA
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibBA [Includes: 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: LFA_1121
symbol: ribE-2
gene_biotype: protein_coding
description:
  Riboflavin synthase beta chain; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family.


ensembl_gene_id: LFA_1123
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: LFA_1128
symbol: LFA_1128
gene_biotype: protein_coding
description:
  Arginine ABC transporter, periplasmic binding protein; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: LFA_1129
symbol: bamD
gene_biotype: protein_coding
description:
  Outer membrane protein assembly factor BamD; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: LFA_1139
symbol: ppiA
gene_biotype: protein_coding
description:
  Putative peptidyl-prolyl cis-trans isomerase A; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: LFA_1147
symbol: hisI
gene_biotype: protein_coding
description:
  Fused phosphoribosyl-AMP cyclohydrolase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; In the N-terminal section; belongs to the PRA-CH family.


ensembl_gene_id: LFA_1148
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase, catalytic subunit with HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: LFA_1149
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.


ensembl_gene_id: LFA_1150
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit with HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: LFA_1151
symbol: hisB
gene_biotype: protein_coding
description:
  Fused histidinol-phosphatase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; In the N-terminal section; belongs to the histidinol- phosphatase family.


ensembl_gene_id: LFA_1152
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase 1; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: LFA_1153
symbol: hisD
gene_biotype: protein_coding
description:
  Bifunctional histidinal dehydrogenase and histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: LFA_1154
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Long subfamily.


ensembl_gene_id: LFA_1155
symbol: LFA_1155
gene_biotype: protein_coding
description:
  Putative Trp repressor fragment; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.


ensembl_gene_id: LFA_1156
symbol: cydA
gene_biotype: protein_coding
description:
  Cytochrome d terminal oxidase, subunit I; Function of homologous gene experimentally demonstrated in an other organism; carrier.


ensembl_gene_id: LFA_1157
symbol: cydB
gene_biotype: protein_coding
description:
  Cytochrome d terminal oxidase, subunit II; Function of homologous gene experimentally demonstrated in an other organism; carrier.


ensembl_gene_id: LFA_1159
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: LFA_1160
symbol: cspI
gene_biotype: protein_coding
description:
  Cold shock protein; Function of homologous gene experimentally demonstrated in an other organism; extrachromosomal origin.


ensembl_gene_id: LFA_1169
symbol: LFA_1169
gene_biotype: protein_coding
description:
  Putative Predicted metal-dependent hydrolases; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_1172
symbol: hemF
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.


ensembl_gene_id: LFA_1173
symbol: flgB
gene_biotype: protein_coding
description:
  Flagellar component of cell-proximal portion of basal-body rod; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: LFA_1174
symbol: flgC
gene_biotype: protein_coding
description:
  Flagellar component of cell-proximal portion of basal-body rod; Function of homologous gene experimentally demonstrated in an other organism; structure.


ensembl_gene_id: LFA_1175
symbol: LFA_1175
gene_biotype: protein_coding
description:
  Flagellar basal-body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.


ensembl_gene_id: LFA_1178
symbol: flgG
gene_biotype: protein_coding
description:
  Flagellar component of cell-distal portion of basal-body rod; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: LFA_1179
symbol: flgH
gene_biotype: protein_coding
description:
  Flagellar L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: LFA_1180
symbol: flgI
gene_biotype: protein_coding
description:
  Flagellar basal body P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: LFA_1185
symbol: VipD
gene_biotype: protein_coding
description:
  Lysophospholipase substrate of the Dot/Icm secretion system; Function of strongly homologous gene; enzyme.


ensembl_gene_id: LFA_1189
symbol: LFA_1189
gene_biotype: protein_coding
description:
  Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.


ensembl_gene_id: LFA_1197
symbol: LFA_1197
gene_biotype: protein_coding
description:
  Membrane protein of unknown function [UbiA prenyltransferase domain]; No homology to any previously reported sequences.


ensembl_gene_id: LFA_1198
symbol: hmgA
gene_biotype: protein_coding
description:
  3-hydroxy-3-methylglutaryl-coenzyme A reductase; Function of strongly homologous gene; enzyme; Belongs to the HMG-CoA reductase family.


ensembl_gene_id: LFA_1199
symbol: idi
gene_biotype: protein_coding
description:
  Isopentenyl-diphosphate Delta-isomerase; Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its highly electrophilic allylic isomer, dimethylallyl diphosphate (DMAPP).


ensembl_gene_id: LFA_1200
symbol: uppS
gene_biotype: protein_coding
description:
  Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific); Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di- trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide.


ensembl_gene_id: LFA_1202
symbol: LFA_1202
gene_biotype: protein_coding
description:
  All-trans-retinol dehydrogenase (NAD(+)); Function of strongly homologous gene; enzyme; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: LFA_1203
symbol: ispA
gene_biotype: protein_coding
description:
  (2E,6E)-farnesyl diphosphate synthase; Function of strongly homologous gene; enzyme; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: LFA_1210
symbol: LFA_1210
gene_biotype: protein_coding
description:
  Putative recombinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.


ensembl_gene_id: LFA_1214
symbol: LFA_1214
gene_biotype: protein_coding
description:
  Putative UDP-N-acetylmuramyl tripeptide synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_1215
symbol: LFA_1215
gene_biotype: protein_coding
description:
  Putative pyoverdine/dityrosine biosynthesis family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_1219
symbol: ETFQO
gene_biotype: protein_coding
description:
  Electron transfer flavoprotein-ubiquinone oxidoreductase, mitochondrial; Accepts electrons from ETF and reduces ubiquinone.


ensembl_gene_id: LFA_1227
symbol: surE
gene_biotype: protein_coding
description:
  Broad specificity 5'(3')-nucleotidase and polyphosphatase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: LFA_1229
symbol: rpoS
gene_biotype: protein_coding
description:
  RNA polymerase, sigma S (sigma 38) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response.


ensembl_gene_id: LFA_1233
symbol: ruvC
gene_biotype: protein_coding
description:
  Component of RuvABC resolvasome, endonuclease; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: LFA_1234
symbol: ruvA
gene_biotype: protein_coding
description:
  Component of RuvABC resolvasome, regulatory subunit; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: LFA_1237
symbol: qseB
gene_biotype: protein_coding
description:
  DNA-binding response regulator in two-component regulatory system with QseC; Function of homologous gene experimentally demonstrated in an other organism; regulator.


ensembl_gene_id: LFA_1238
symbol: LFA_1238
gene_biotype: protein_coding
description:
  Putative intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.


ensembl_gene_id: LFA_1240
symbol: gloB
gene_biotype: protein_coding
description:
  Putative hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.


ensembl_gene_id: LFA_1241
symbol: rlmJ
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase J; Specifically methylates the adenine in position 2030 of 23S rRNA.


ensembl_gene_id: LFA_1243
symbol: folD
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: LFA_1245
symbol: LFA_1245
gene_biotype: protein_coding
description:
  Putative Carbonic anhydrase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_1248
symbol: truA
gene_biotype: protein_coding
description:
  Pseudouridylate synthase I; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: LFA_1250
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: LFA_1251
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: LFA_1252
symbol: glnS
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_1253
symbol: cysS
gene_biotype: protein_coding
description:
  cysteinyl-tRNA synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: LFA_1254
symbol: gspE
gene_biotype: protein_coding
description:
  General secretory pathway component, cryptic; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.


ensembl_gene_id: LFA_1256
symbol: degQ
gene_biotype: protein_coding
description:
  Serine endoprotease, periplasmic; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the peptidase S1C family.


ensembl_gene_id: LFA_1257
symbol: LFA_1257
gene_biotype: protein_coding
description:
  Homologs of previously reported genes of unknown function; Belongs to the multicopper oxidase YfiH/RL5 family.


ensembl_gene_id: LFA_1258
symbol: rluD
gene_biotype: protein_coding
description:
  23S rRNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: LFA_1259
symbol: miaB
gene_biotype: protein_coding
description:
  Isopentenyl-adenosine A37 tRNA methylthiolase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: LFA_1261
symbol: LFA_1261
gene_biotype: protein_coding
description:
  Putative enhanced entry protein EnhA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_1264
symbol: fliD
gene_biotype: protein_coding
description:
  Flagellar hook associated protein 2 FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: LFA_1266
symbol: fla
gene_biotype: protein_coding
description:
  Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: LFA_1267
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, beta (carboxyltranferase) subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: LFA_1268
symbol: folC
gene_biotype: protein_coding
description:
  Bifunctional folylpolyglutamate synthase and dihydrofolate synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: LFA_1269
symbol: LFA_1269
gene_biotype: protein_coding
description:
  Sporulation domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; cell process.


ensembl_gene_id: LFA_1271
symbol: nadD
gene_biotype: protein_coding
description:
  Putative nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: LFA_1273
symbol: rlpB
gene_biotype: protein_coding
description:
  Rare lipoprotein B; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane.


ensembl_gene_id: LFA_1274
symbol: leuS
gene_biotype: protein_coding
description:
  leucyl-tRNA synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: LFA_1275
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: LFA_1277
symbol: alh
gene_biotype: protein_coding
description:
  Putative aldehyde dehydrogenase family 7 member A1 homolog; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: LFA_1281
symbol: LFA_1281
gene_biotype: protein_coding
description:
  Conserved exported protein of unknown function[B-lactamase][TPR domain][Sel1 domain]; Homologs of previously reported genes of unknown function.


ensembl_gene_id: LFA_1288
symbol: glnA
gene_biotype: protein_coding
description:
  Glutamine synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the glutamine synthetase family.


ensembl_gene_id: LFA_1296
symbol: lpxB
gene_biotype: protein_coding
description:
  Lipid-A-disaccharide synthase 1; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: LFA_1298
symbol: rnhB
gene_biotype: protein_coding
description:
  Ribonuclease HII, degrades RNA of DNA-RNA hybrids; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.


ensembl_gene_id: LFA_1299
symbol: mrdB
gene_biotype: protein_coding
description:
  Cell wall shape-determining protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: LFA_1300
symbol: mrdA
gene_biotype: protein_coding
description:
  Transpeptidase involved in peptidoglycan synthesis (penicillin-binding protein 2); Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.


ensembl_gene_id: LFA_1301
symbol: ybeA
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: LFA_1302
symbol: rsfS
gene_biotype: protein_coding
description:
  Conserved protein of unknown function; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: LFA_1306
symbol: calB
gene_biotype: protein_coding
description:
  Putative coniferyl aldehyde dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: LFA_1309
symbol: rnhA-dnaQ
gene_biotype: protein_coding
description:
  Fragment of bifunctional protein [Includes: ribonuclease HI; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_1312
symbol: yadR
gene_biotype: protein_coding
description:
  Putative chaperone involved in Fe-S cluster assembly and activation; Required for insertion of 4Fe-4S clusters for at least IspG.


ensembl_gene_id: LFA_1313
symbol: trmU
gene_biotype: protein_coding
description:
  tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: LFA_1320
symbol: rpmF
gene_biotype: protein_coding
description:
  50S ribosomal protein L32; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL32 family.


ensembl_gene_id: LFA_1321
symbol: plsX
gene_biotype: protein_coding
description:
  Fatty acid/phospholipid synthesis protein; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: LFA_1322
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: LFA_1323
symbol: fabD
gene_biotype: protein_coding
description:
  malonyl-CoA-[acyl-carrier-protein] transacylase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_1324
symbol: fabG-2
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: LFA_1326
symbol: fabF-2
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: LFA_1327
symbol: mltG
gene_biotype: protein_coding
description:
  Periplasmic solute-binding protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: LFA_1328
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: LFA_1331
symbol: ycfH
gene_biotype: protein_coding
description:
  Putative metallodependent hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_1332
symbol: anmK
gene_biotype: protein_coding
description:
  Anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.


ensembl_gene_id: LFA_1356
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: LFA_1357
symbol: trxC
gene_biotype: protein_coding
description:
  Putative thioredoxin-2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the thioredoxin family.


ensembl_gene_id: LFA_1358
symbol: glpD
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: LFA_1359
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.


ensembl_gene_id: LFA_1362
symbol: gltA
gene_biotype: protein_coding
description:
  Citrate synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the citrate synthase family.


ensembl_gene_id: LFA_1363
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase (type II topoisomerase), subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP [...]


ensembl_gene_id: LFA_1364
symbol: serC
gene_biotype: protein_coding
description:
  3-phosphoserine/phosphohydroxythreonine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.


ensembl_gene_id: LFA_1365
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: LFA_1366
symbol: cmk
gene_biotype: protein_coding
description:
  Cytidylate kinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_1367
symbol: rpsA
gene_biotype: protein_coding
description:
  30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.


ensembl_gene_id: LFA_1369
symbol: lapB
gene_biotype: protein_coding
description:
  Conserved protein of unknown function; Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane; Belongs to the LapB family.


ensembl_gene_id: LFA_1370
symbol: wbpE
gene_biotype: protein_coding
description:
  UDP-2-acetamido-2-deoxy-3-oxo-D-glucuronate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: LFA_1371
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: LFA_1372
symbol: LFA_1372
gene_biotype: protein_coding
description:
  Protein with patatin domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.


ensembl_gene_id: LFA_1377
symbol: ubiA
gene_biotype: protein_coding
description:
  4-hydroxybenzoate octaprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.


ensembl_gene_id: LFA_1381
symbol: deoC
gene_biotype: protein_coding
description:
  2-deoxyribose-5-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate.


ensembl_gene_id: LFA_1382
symbol: xapA
gene_biotype: protein_coding
description:
  Purine nucleoside phosphorylase 2; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: LFA_1383
symbol: cdd
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: LFA_1386
symbol: cpxR
gene_biotype: protein_coding
description:
  DNA-binding response regulator in two-component regulatory system with CpxA; Function of homologous gene experimentally demonstrated in an other organism; regulator.


ensembl_gene_id: LFA_1387
symbol: ybeX
gene_biotype: protein_coding
description:
  Putative protein involved in divalent ion export; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.


ensembl_gene_id: LFA_1388
symbol: ybeY
gene_biotype: protein_coding
description:
  Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: LFA_1389
symbol: ybeZ
gene_biotype: protein_coding
description:
  Putative enzyme with nucleoside triphosphate hydrolase domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_1391
symbol: LFA_1391
gene_biotype: protein_coding
description:
  Translation factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; factor; Belongs to the SUA5 family.


ensembl_gene_id: LFA_1393
symbol: scpA
gene_biotype: protein_coding
description:
  Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: LFA_1394
symbol: scpB
gene_biotype: protein_coding
description:
  Segregation and condensation protein B homolog; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: LFA_1400
symbol: rlmD
gene_biotype: protein_coding
description:
  23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.


ensembl_gene_id: LFA_1401
symbol: relA
gene_biotype: protein_coding
description:
  (p)ppGpp synthetase I/GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: LFA_1403
symbol: yfdZ
gene_biotype: protein_coding
description:
  Putative aminotransferase, PLP-dependent; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_1405
symbol: recJ
gene_biotype: protein_coding
description:
  ssDNA exonuclease, 5'--> 3'-specific; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_1406
symbol: yjbN
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase A; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: LFA_1407
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit, ATPase; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane. Belongs to the SecA family.


ensembl_gene_id: LFA_1412
symbol: LFA_1412
gene_biotype: protein_coding
description:
  Putative Permease of the major facilitator superfamily protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_1414
symbol: LFA_1414
gene_biotype: protein_coding
description:
  Conserved protein of unknown function; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.


ensembl_gene_id: LFA_1415
symbol: coaE
gene_biotype: protein_coding
description:
  Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: LFA_1418
symbol: bioA
gene_biotype: protein_coding
description:
  Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: LFA_1419
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: LFA_1421
symbol: bioH
gene_biotype: protein_coding
description:
  Pimeloyl-[acyl-carrier protein] methyl ester esterase; The physiological role of BioH is to remove the methyl group introduced by BioC when the pimeloyl moiety is complete. It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway through the hydrolysis of the ester bonds of pimeloyl-ACP esters.


ensembl_gene_id: LFA_1422
symbol: bioD
gene_biotype: protein_coding
description:
  Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: LFA_1425
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: LFA_1426
symbol: LFA_1426
gene_biotype: protein_coding
description:
  Putative mechanosensitive ion channel MscS; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; transporter.


ensembl_gene_id: LFA_1427
symbol: mutH
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair. Belongs to the MutH family.


ensembl_gene_id: LFA_1428
symbol: LFA_1428
gene_biotype: protein_coding
description:
  Putative transposase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.


ensembl_gene_id: LFA_1433
symbol: LFA_1433
gene_biotype: protein_coding
description:
  Protein of unknown function [Integrase catalytic region]; No homology to any previously reported sequences.


ensembl_gene_id: LFA_1436
symbol: LFA_1436
gene_biotype: protein_coding
description:
  Protein of unknown function [Heat shock protein DnaJ, N-terminal motif]; No homology to any previously reported sequences.


ensembl_gene_id: LFA_1439
symbol: LFA_1439
gene_biotype: protein_coding
description:
  Fragment of GCN5-related N-acetyltransferase (part 1); Function of strongly homologous gene; enzyme.


ensembl_gene_id: LFA_1447
symbol: LFA_1447
gene_biotype: protein_coding
description:
  Protein of unknown function [F-box]; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.


ensembl_gene_id: LFA_1448
symbol: LFA_1448
gene_biotype: protein_coding
description:
  Conserved protein of unknown function [PAS/PAC domain]; Homologs of previously reported genes of unknown function.


ensembl_gene_id: LFA_1449
symbol: LFA_1449
gene_biotype: protein_coding
description:
  Putative sterol desaturase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_1452
symbol: LFA_1452
gene_biotype: protein_coding
description:
  Conserved membrane protein of unknown function [coiled-coil]; Homologs of previously reported genes of unknown function.


ensembl_gene_id: LFA_1454
symbol: LFA_1454
gene_biotype: protein_coding
description:
  Protein of unknown function [Cupin 2 conserved barrel domain protein]; No homology to any previously reported sequences.


ensembl_gene_id: LFA_1455
symbol: thiD-2
gene_biotype: protein_coding
description:
  Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: LFA_1456
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: LFA_1460
symbol: wscI
gene_biotype: protein_coding
description:
  Putative integral membrane GtrA-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.


ensembl_gene_id: LFA_1465
symbol: LFA_1465
gene_biotype: protein_coding
description:
  Fragment of Glyoxalase/bleomycin resistance protein/dioxygenase (part 2); Function of strongly homologous gene; enzyme.


ensembl_gene_id: LFA_1466
symbol: LFA_1466
gene_biotype: protein_coding
description:
  Transposase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; extrachromosomal origin.


ensembl_gene_id: LFA_1472
symbol: LFA_1472
gene_biotype: protein_coding
description:
  Conserved protein of unknown function [ankyrin repeat]; Homologs of previously reported genes of unknown function.


ensembl_gene_id: LFA_1475
symbol: LFA_1475
gene_biotype: protein_coding
description:
  Putative alanine racemase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_1489
symbol: rhlE
gene_biotype: protein_coding
description:
  RNA helicase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the DEAD box helicase family.


ensembl_gene_id: LFA_1496
symbol: phtK
gene_biotype: protein_coding
description:
  Putative to nasA protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_1498
symbol: LFA_1498
gene_biotype: protein_coding
description:
  Protein of unknown function [ank domain][Ras domain][coiled-coil domain]; No homology to any previously reported sequences.


ensembl_gene_id: LFA_1501
symbol: LFA_1501
gene_biotype: protein_coding
description:
  Putative sensory box histidine kinase/response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_1502
symbol: LFA_1502
gene_biotype: protein_coding
description:
  Putative two-component response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_1503
symbol: LFA_1503
gene_biotype: protein_coding
description:
  Putative regulatory protein (GGDEF domain); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_1506
symbol: LFA_1506
gene_biotype: protein_coding
description:
  Putative Membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_1513
symbol: LFA_1513
gene_biotype: protein_coding
description:
  Putative Lipoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_1515
symbol: LFA_1515
gene_biotype: protein_coding
description:
  Protein of unknown function [9 coiled coil domains]; No homology to any previously reported sequences.


ensembl_gene_id: LFA_1519
symbol: lpd
gene_biotype: protein_coding
description:
  Lipoamide dehydrogenase, E3 component is part of three enzyme complexes; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_1520
symbol: aceF
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase, dihydrolipoyltransacetylase component E2; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: LFA_1521
symbol: aceE
gene_biotype: protein_coding
description:
  Pyruvate decarboxylase, E1 component of the pyruvate dehydrogenase complex; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: LFA_1526
symbol: rlpA-2
gene_biotype: protein_coding
description:
  Conserved exported protein of unknown function; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: LFA_1530
symbol: lipB
gene_biotype: protein_coding
description:
  Lipoyl-protein ligase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: LFA_1534
symbol: LFA_1534
gene_biotype: protein_coding
description:
  Protein of unknown function [9 coiled-coil domains]; No homology to any previously reported sequences.


ensembl_gene_id: LFA_1552
symbol: pin
gene_biotype: protein_coding
description:
  Site-specific DNA recombinase; Function of homologous gene experimentally demonstrated in an other organism; extrachromosomal origin.


ensembl_gene_id: LFA_1565
symbol: pilD
gene_biotype: protein_coding
description:
  Type 4 prepilin-like proteins leader peptide-processing enzyme [Includes: Leader peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: LFA_1569
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched-chain-amino-acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: LFA_1572
symbol: LFA_1572
gene_biotype: protein_coding
description:
  Putative Transcriptional regulator, TetR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_1573
symbol: fabF-3
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: LFA_1581
symbol: AKHSDH
gene_biotype: protein_coding
description:
  Bifunctional aspartokinase/homoserine dehydrogenase 2, chloroplastic [Includes: Aspartokinase; Homoserine dehydrogenase]; In the C-terminal section; belongs to the homoserine dehydrogenase family.


ensembl_gene_id: LFA_1582
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: LFA_1587
symbol: LFA_1587
gene_biotype: protein_coding
description:
  Putative phosphotransferase; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: LFA_1589
symbol: prpD
gene_biotype: protein_coding
description:
  2-methylcitrate dehydratase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_1590
symbol: prpC
gene_biotype: protein_coding
description:
  2-methylcitrate synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the citrate synthase family.


ensembl_gene_id: LFA_1591
symbol: prpB
gene_biotype: protein_coding
description:
  Methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.


ensembl_gene_id: LFA_1592
symbol: mnmC
gene_biotype: protein_coding
description:
  tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.


ensembl_gene_id: LFA_1594
symbol: hemL
gene_biotype: protein_coding
description:
  Glutamate-1-semialdehyde aminotransferase (aminomutase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_1598
symbol: pcnB
gene_biotype: protein_coding
description:
  poly(A) polymerase I; Adds poly(A) tail to the 3' end of many RNAs, which usually targets these RNAs for decay. Plays a significant role in the global control of gene expression, through influencing the rate of transcript degradation, and in the general RNA quality control. Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: LFA_1599
symbol: folK
gene_biotype: protein_coding
description:
  2-amino-4-hydroxy-6-hydroxymethyldihyropteridine pyrophosphokinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_1601
symbol: der
gene_biotype: protein_coding
description:
  GTPase involved in ribosome synthesis and maintenance; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: LFA_1602
symbol: bamB
gene_biotype: protein_coding
description:
  Outer membrane protein assembly factor BamB; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: LFA_1604
symbol: hisS
gene_biotype: protein_coding
description:
  Histidyl tRNA synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_1606
symbol: LFA_1606
gene_biotype: protein_coding
description:
  Putative Type IV pilus biogenesis/stability protein PilW; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_1607
symbol: yfgB
gene_biotype: protein_coding
description:
  Putative Fe-S containing enzyme; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: LFA_1608
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase (NDK) (NDP kinase) (Nucleoside-2-P kinase); Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: LFA_1612
symbol: lpxH
gene_biotype: protein_coding
description:
  UDP-2,3-diacylglucosamine hydrolase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: LFA_1613
symbol: minC
gene_biotype: protein_coding
description:
  Putative septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: LFA_1614
symbol: fadD
gene_biotype: protein_coding
description:
  acyl-CoA synthetase (long-chain-fatty-acid--CoA ligase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_1615
symbol: artJ-2
gene_biotype: protein_coding
description:
  Arginine 3rd transport system periplasmic binding protein; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: LFA_1617
symbol: pabB
gene_biotype: protein_coding
description:
  Aminodeoxychorismate synthase, subunit I; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_1618
symbol: pdhA
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).


ensembl_gene_id: LFA_1625
symbol: tolB
gene_biotype: protein_coding
description:
  Protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: LFA_1627
symbol: tolR
gene_biotype: protein_coding
description:
  Protein TolR; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: LFA_1628
symbol: tolQ
gene_biotype: protein_coding
description:
  Membrane spanning protein in TolA-TolQ-TolR complex; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: LFA_1629
symbol: ybgC
gene_biotype: protein_coding
description:
  acyl-CoA thioesterase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_1630
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction helicase, subunit B; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: LFA_1638
symbol: LFA_1638
gene_biotype: protein_coding
description:
  Putative ErfK/YbiS/YcfS/YnhG protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_1639
symbol: pcsA
gene_biotype: protein_coding
description:
  Phosphatidylcholine synthase; Condenses choline with CDP-diglyceride to produce phosphatidylcholine and CMP; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: LFA_1642
symbol: LFA_1642
gene_biotype: protein_coding
description:
  Putative Thioredoxin-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_1646
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: LFA_1650
symbol: LFA_1650
gene_biotype: protein_coding
description:
  Putative ErfK/YbiS/YcfS/YnhG family protein precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_1651
symbol: LFA_1651
gene_biotype: protein_coding
description:
  Homologs of previously reported genes of unknown function; In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: LFA_1656
symbol: LFA_1656
gene_biotype: protein_coding
description:
  Putative permease of the major facilitator superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_1674
symbol: LFA_1674
gene_biotype: protein_coding
description:
  Putative sugar-proton symporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: LFA_1680
symbol: LFA_1680
gene_biotype: protein_coding
description:
  Permease of the major facilitator superfamily; Function of strongly homologous gene; membrane component.


ensembl_gene_id: LFA_1685
symbol: purE
gene_biotype: protein_coding
description:
  N5-carboxyaminoimidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: LFA_1686
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: LFA_1688
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: LFA_1690
symbol: purQ
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase I (FGAM synthase I); Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is t [...]


ensembl_gene_id: LFA_1691
symbol: purM
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_1692
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase 2; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]


ensembl_gene_id: LFA_1696
symbol: ybbO
gene_biotype: protein_coding
description:
  Uncharacterized oxidoreductase YbbO; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: LFA_1699
symbol: LFA_1699
gene_biotype: protein_coding
description:
  Putative Flagellar hook-length control protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_1703
symbol: LFA_1703
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: LFA_1705
symbol: LFA_1705
gene_biotype: protein_coding
description:
  Putative Universal stress protein UspA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.


ensembl_gene_id: LFA_1706
symbol: LFA_1706
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: LFA_1708
symbol: proQ
gene_biotype: protein_coding
description:
  Activator of osmoprotectant transporter ProP; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family.


ensembl_gene_id: LFA_1709
symbol: ubiG
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis O-methyltransferase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.


ensembl_gene_id: LFA_1710
symbol: LFA_1710
gene_biotype: protein_coding
description:
  Putative Uracil DNA glycosylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_1712
symbol: sfcA
gene_biotype: protein_coding
description:
  Malate dehydrogenase, (decarboxylating, NAD-requiring) (malic enzyme); Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_1717
symbol: ppeA
gene_biotype: protein_coding
description:
  Kinectin 1 (Kinesin receptor)-substrate of dot/icm secretion system [6 coiled coil domains]; Function of strongly homologous gene; factor.


ensembl_gene_id: LFA_1720
symbol: astA
gene_biotype: protein_coding
description:
  Arginine succinyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_1721
symbol: astD
gene_biotype: protein_coding
description:
  Succinylglutamic semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.


ensembl_gene_id: LFA_1722
symbol: astB
gene_biotype: protein_coding
description:
  Succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2).


ensembl_gene_id: LFA_1724
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: LFA_1726
symbol: tsf
gene_biotype: protein_coding
description:
  Protein chain elongation factor EF-Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: LFA_1727
symbol: rpsB
gene_biotype: protein_coding
description:
  30S ribosomal protein S2; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the universal ribosomal protein uS2 family.


ensembl_gene_id: LFA_1732
symbol: LFA_1732
gene_biotype: protein_coding
description:
  Transcriptional activator TenA, putative; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.


ensembl_gene_id: LFA_1741
symbol: LFA_1741
gene_biotype: protein_coding
description:
  Putative dot/icm effector [ankyrin domain][SET domain]; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.


ensembl_gene_id: LFA_1743
symbol: glnD
gene_biotype: protein_coding
description:
  Bifunctional uridylyltransferase/uridylyl-removing enzyme; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.


ensembl_gene_id: LFA_1745
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: LFA_1747
symbol: guaB
gene_biotype: protein_coding
description:
  IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: LFA_1748
symbol: minD
gene_biotype: protein_coding
description:
  Cell division inhibitor, a membrane ATPase,activates minC; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_1749
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: LFA_1751
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: LFA_1752
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: LFA_1753
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: LFA_1754
symbol: ilvE-2
gene_biotype: protein_coding
description:
  Putative 2-isopropylmalate synthase; Acts on leucine, isoleucine and valine. Belongs to the alpha-IPM synthase/homocitrate synthase family.


ensembl_gene_id: LFA_1758
symbol: fadE-2
gene_biotype: protein_coding
description:
  Acyl coenzyme A dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_1762
symbol: ugpC
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the ABC transporter superfamily.


ensembl_gene_id: LFA_1763
symbol: ugpE
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate transporter subunit; Part of the binding-protein-dependent transport system for sn-glycerol-3-phosphate; probably responsible for the translocation of the substrate across the membrane.


ensembl_gene_id: LFA_1764
symbol: ugpA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.


ensembl_gene_id: LFA_1769
symbol: gatC
gene_biotype: protein_coding
description:
  Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: LFA_1770
symbol: gatA
gene_biotype: protein_coding
description:
  Glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: LFA_1771
symbol: gatB
gene_biotype: protein_coding
description:
  Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: LFA_1778
symbol: iscS
gene_biotype: protein_coding
description:
  Cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_1779
symbol: yfhQ
gene_biotype: protein_coding
description:
  Putative methyltransferase; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: LFA_1780
symbol: suhB
gene_biotype: protein_coding
description:
  Inositol monophosphatase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the inositol monophosphatase superfamily.


ensembl_gene_id: LFA_1784
symbol: clpB
gene_biotype: protein_coding
description:
  Protein disaggregation chaperone; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: LFA_1789
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: LFA_1794
symbol: aroK-2
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: LFA_1799
symbol: LFA_1799
gene_biotype: protein_coding
description:
  Putative multidrug resistance protein NorM (Multidrug-efflux transporter); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_1815
symbol: LFA_1815
gene_biotype: protein_coding
description:
  Putative Acetylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_1825
symbol: LFA_1825
gene_biotype: protein_coding
description:
  Putative RNA-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the CvfB family.


ensembl_gene_id: LFA_1830
symbol: LFA_1830
gene_biotype: protein_coding
description:
  Putative ABC transporter, permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_1832
symbol: LFA_1832
gene_biotype: protein_coding
description:
  Putative lipoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_1835
symbol: pncB
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: LFA_1840
symbol: LFA_1840
gene_biotype: protein_coding
description:
  Similar to IcmL (DotI) protein [Macrophage killing IcmL/DotI domain]; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.


ensembl_gene_id: LFA_1843
symbol: LFA_1843
gene_biotype: protein_coding
description:
  Protein of unknown function [F-box domain containing protein]; Homologs of previously reported genes of unknown function.


ensembl_gene_id: LFA_1845
symbol: LFA_1845
gene_biotype: protein_coding
description:
  Conserved protein of unknown function [FIST domain, N-terminal]; Homologs of previously reported genes of unknown function.


ensembl_gene_id: LFA_1846
symbol: LFA_1846
gene_biotype: protein_coding
description:
  Putative Zeta toxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.


ensembl_gene_id: LFA_1849
symbol: dctA
gene_biotype: protein_coding
description:
  C4-dicarboxylate transport protein 2; Function of strongly homologous gene; transporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: LFA_1851
symbol: yjcE
gene_biotype: protein_coding
description:
  Na+/H+ antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.


ensembl_gene_id: LFA_1855
symbol: ybaZ
gene_biotype: protein_coding
description:
  Putative methylated-DNA methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_1866
symbol: ydcN
gene_biotype: protein_coding
description:
  Putative DNA-binding transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.


ensembl_gene_id: LFA_1871
symbol: ftsH
gene_biotype: protein_coding
description:
  ATP-dependent zinc metalloprotease; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: LFA_1877
symbol: LFA_1877
gene_biotype: protein_coding
description:
  Putative Phosphoribosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_1881
symbol: LFA_1881
gene_biotype: protein_coding
description:
  Protein of unknown function [Leucine rich repeat containing protein]; No homology to any previously reported sequences.


ensembl_gene_id: LFA_1882
symbol: LFA_1882
gene_biotype: protein_coding
description:
  Protein of unknown function [Intron-encoded nuclease 2]; No homology to any previously reported sequences.


ensembl_gene_id: LFA_1883
symbol: LFA_1883
gene_biotype: protein_coding
description:
  Conserved protein of unknown function [Host attachment protein]; Homologs of previously reported genes of unknown function.


ensembl_gene_id: LFA_1889
symbol: yacG
gene_biotype: protein_coding
description:
  DNA gyrase inhibitor YacG; Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C- terminal domain of GyrB, which probably disrupts DNA binding by the gyrase.


ensembl_gene_id: LFA_1895
symbol: LFA_1895
gene_biotype: protein_coding
description:
  Putative Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_1897
symbol: LFA_1897
gene_biotype: protein_coding
description:
  Conserved protein of unknown function [ras domain]; Homologs of previously reported genes of unknown function.


ensembl_gene_id: LFA_1899
symbol: LFA_1899
gene_biotype: protein_coding
description:
  Regulator of chromosome condensation, rcc (substrate of the Dot/Icm secretion system); Function of strongly homologous gene; regulator.


ensembl_gene_id: LFA_1900
symbol: LFA_1900
gene_biotype: protein_coding
description:
  Conserved protein of unknown function [Fic domain]; Homologs of previously reported genes of unknown function.


ensembl_gene_id: LFA_1903
symbol: LFA_1903
gene_biotype: protein_coding
description:
  Putative Trypsin-like serine proteases; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_1907
symbol: LFA_1907
gene_biotype: protein_coding
description:
  Conserved protein of unknown function [ALPHA/BETA HYDROLASE RELATED]; Function of strongly homologous gene.


ensembl_gene_id: LFA_1908
symbol: capD-2
gene_biotype: protein_coding
description:
  Capsular polysaccharide biosynthesis capD and UDP-glucose 4-epimerase; Function of strongly homologous gene; enzyme.


ensembl_gene_id: LFA_1910
symbol: LFA_1910
gene_biotype: protein_coding
description:
  UbiA family prenyltransferase; Function of strongly homologous gene; enzyme; Belongs to the UbiA prenyltransferase family.


ensembl_gene_id: LFA_1919
symbol: emrA
gene_biotype: protein_coding
description:
  Multidrug efflux system; Function of homologous gene experimentally demonstrated in an other organism; transporter.


ensembl_gene_id: LFA_1920
symbol: emrB
gene_biotype: protein_coding
description:
  Multidrug efflux system protein; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the major facilitator superfamily.


ensembl_gene_id: LFA_1922
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase, NAD(+)-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: LFA_1926
symbol: LFA_1926
gene_biotype: protein_coding
description:
  Putative amino acid transporters; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_1928
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: LFA_1932
symbol: tldD
gene_biotype: protein_coding
description:
  Putative peptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_1933
symbol: LFA_1933
gene_biotype: protein_coding
description:
  Putative enzyme; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_1934
symbol: yccA
gene_biotype: protein_coding
description:
  Inner membrane protein yccA; Function of strongly homologous gene; membrane component; Belongs to the BI1 family.


ensembl_gene_id: LFA_1935
symbol: LFA_1935
gene_biotype: protein_coding
description:
  Putative fatty acid hydroxylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_1937
symbol: LFA_1937
gene_biotype: protein_coding
description:
  Putative Transcriptional regulator, LysR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: LFA_1939
symbol: LFA_1939
gene_biotype: protein_coding
description:
  Putative heat shock protein, Hsp20 family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: LFA_1941
symbol: mscL
gene_biotype: protein_coding
description:
  Mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: LFA_1942
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: LFA_1944
symbol: recA
gene_biotype: protein_coding
description:
  DNA strand exchange and recombination protein with protease and nuclease activity; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: LFA_1945
symbol: cinA
gene_biotype: protein_coding
description:
  Competence-damage inducible protein CinA; Function of strongly homologous gene; factor; Belongs to the CinA family.


ensembl_gene_id: LFA_1947
symbol: mutS
gene_biotype: protein_coding
description:
  Methyl-directed mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: LFA_1950
symbol: hemB
gene_biotype: protein_coding
description:
  Porphobilinogen synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the ALAD family.


ensembl_gene_id: LFA_1953
symbol: LFA_1953
gene_biotype: protein_coding
description:
  Homologs of previously reported genes of unknown function; Belongs to the Orn/Lys/Arg decarboxylase class-II family.


ensembl_gene_id: LFA_1956
symbol: mrp
gene_biotype: protein_coding
description:
  Protein mrp; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: LFA_1963
symbol: lpxK
gene_biotype: protein_coding
description:
  Lipid A 4'kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: LFA_1964
symbol: msbA
gene_biotype: protein_coding
description:
  Fused lipid transporter subunits of ABC superfamily: membrane component; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.


ensembl_gene_id: LFA_1965
symbol: LFA_1965
gene_biotype: protein_coding
description:
  Putative Acetyltransferase, GNAT family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_1966
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase (quinone); Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: LFA_1969
symbol: AAT
gene_biotype: protein_coding
description:
  Acetyl-CoA acetyltransferase, cytosolic 1; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: LFA_1977
symbol: LFA_1977
gene_biotype: protein_coding
description:
  Membrane protein of unknown function; Translocates 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane.


ensembl_gene_id: LFA_1978
symbol: LFA_1978
gene_biotype: protein_coding
description:
  Putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Translocates 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane.


ensembl_gene_id: LFA_1983
symbol: LFA_1983
gene_biotype: protein_coding
description:
  Conserved protein of unknown function [8 coiled coil domains]; Homologs of previously reported genes of unknown function.


ensembl_gene_id: LFA_1987
symbol: metN
gene_biotype: protein_coding
description:
  DL-methionine transporter subunit; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: LFA_1988
symbol: metI
gene_biotype: protein_coding
description:
  DL-methionine transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.


ensembl_gene_id: LFA_1992
symbol: rsmJ
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase J; Specifically methylates the guanosine in position 1516 of 16S rRNA.


ensembl_gene_id: LFA_1994
symbol: glyS
gene_biotype: protein_coding
description:
  Glycine tRNA synthetase, beta subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_1995
symbol: glyQ
gene_biotype: protein_coding
description:
  glycyl-tRNA synthetase, alpha chain; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_1996
symbol: LFA_1996
gene_biotype: protein_coding
description:
  Putative outer membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_1997
symbol: uvrD
gene_biotype: protein_coding
description:
  DNA-dependent ATPase I and helicase II; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_1999
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: LFA_2002
symbol: gshB
gene_biotype: protein_coding
description:
  Glutathione synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the prokaryotic GSH synthase family.


ensembl_gene_id: LFA_2015
symbol: LFA_2015
gene_biotype: protein_coding
description:
  Conserved protein of unknown function; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division.


ensembl_gene_id: LFA_2018
symbol: udk
gene_biotype: protein_coding
description:
  Uridine/cytidine kinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_2019
symbol: fabI
gene_biotype: protein_coding
description:
  Enoyl-[acyl-carrier-protein] reductase, NADH-dependent; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_2023
symbol: hupB
gene_biotype: protein_coding
description:
  HU, DNA-binding transcriptional regulator, beta subunit; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: LFA_2024
symbol: lon
gene_biotype: protein_coding
description:
  DNA-binding ATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: LFA_2027
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: LFA_2028
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: LFA_2029
symbol: tig
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis/trans isomerase (trigger factor); Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: LFA_2033
symbol: rnc
gene_biotype: protein_coding
description:
  RNase III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: LFA_2036
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: LFA_2038
symbol: LFA_2038
gene_biotype: protein_coding
description:
  Type II secretion system protein L; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.


ensembl_gene_id: LFA_2042
symbol: LFA_2042
gene_biotype: protein_coding
description:
  Deoxyguanosinetriphosphate triphosphohydrolase-like protein 1; Belongs to the dGTPase family. Type 2 subfamily.


ensembl_gene_id: LFA_2043
symbol: LFA_2043
gene_biotype: protein_coding
description:
  Putative aldo-keto reductase 4; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2047
symbol: fliQ-2
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: LFA_2048
symbol: LFA_2048
gene_biotype: protein_coding
description:
  Putative flagellar biosynthesis pathway, component FliR; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2055
symbol: flgI-2
gene_biotype: protein_coding
description:
  Flagellar P-ring protein 1; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: LFA_2056
symbol: LFA_2056
gene_biotype: protein_coding
description:
  Conserved protein of unknown function; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: LFA_2059
symbol: LFA_2059
gene_biotype: protein_coding
description:
  Putative flagellar M-ring protein FliF; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2070
symbol: fliP-2
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: LFA_2081
symbol: LFA_2081
gene_biotype: protein_coding
description:
  Conserved protein of unknown function [13 coiled coil domains]; Homologs of previously reported genes of unknown function.


ensembl_gene_id: LFA_2086
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: LFA_2090
symbol: LFA_2090
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, CBS domain; Homologs of previously reported genes of unknown function.


ensembl_gene_id: LFA_2093
symbol: alr
gene_biotype: protein_coding
description:
  Alanine racemase 1, PLP-binding, biosynthetic; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: LFA_2094
symbol: dnaB
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: LFA_2096
symbol: LFA_2096
gene_biotype: protein_coding
description:
  Protein of unknown function [ankyrin repeat][STPK domain][Coiled-coil domain]; No homology to any previously reported sequences.


ensembl_gene_id: LFA_2101
symbol: nadE
gene_biotype: protein_coding
description:
  Putative glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: LFA_2106
symbol: pgpA
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphatase A; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).


ensembl_gene_id: LFA_2107
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamin-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: LFA_2108
symbol: nusB
gene_biotype: protein_coding
description:
  Transcription antitermination protein; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: LFA_2110
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional repressor of nrd genes; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: LFA_2111
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: LFA_2116
symbol: LFA_2116
gene_biotype: protein_coding
description:
  RND efflux membrane fusion protein, acriflavin resistance protein E; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: LFA_2117
symbol: LFA_2117
gene_biotype: protein_coding
description:
  Putative multidrug efflux transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: LFA_2118
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: LFA_2124
symbol: LFA_2124
gene_biotype: protein_coding
description:
  Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_2125
symbol: LFA_2125
gene_biotype: protein_coding
description:
  Putative Adenylate/Guanylate cyclase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.


ensembl_gene_id: LFA_2140
symbol: pilE-2
gene_biotype: protein_coding
description:
  Tfp pilus assembly protein, major type IV pilin class A; Function of strongly homologous gene; structure; Belongs to the N-Me-Phe pilin family.


ensembl_gene_id: LFA_2141
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: LFA_2142
symbol: ycaR
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0434 family.


ensembl_gene_id: LFA_2144
symbol: yoaA
gene_biotype: protein_coding
description:
  Putative ATP-dependent helicase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_2145
symbol: fdxA
gene_biotype: protein_coding
description:
  7-Fe ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: LFA_2149
symbol: LFA_2149
gene_biotype: protein_coding
description:
  Putative Fe(2+)-trafficking protein; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes.


ensembl_gene_id: LFA_2150
symbol: indA
gene_biotype: protein_coding
description:
  Indigoidine synthase A-like protein, uncharacterized enzyme involved in pigment biosynthesis; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family.


ensembl_gene_id: LFA_2158
symbol: LFA_2158
gene_biotype: protein_coding
description:
  Protein of unknown function [leucine-rich repeat]; No homology to any previously reported sequences.


ensembl_gene_id: LFA_2161
symbol: LFA_2161
gene_biotype: protein_coding
description:
  Protein of unknown function [Resolvase, N-terminal domain]; No homology to any previously reported sequences.


ensembl_gene_id: LFA_2170
symbol: LFA_2170
gene_biotype: protein_coding
description:
  Putative dipeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_2172
symbol: LFA_2172
gene_biotype: protein_coding
description:
  Putative Cysteine dioxygenase type I [cupin region]; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_2173
symbol: LFA_2173
gene_biotype: protein_coding
description:
  Putative inner membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.


ensembl_gene_id: LFA_2176
symbol: LFA_2176
gene_biotype: protein_coding
description:
  Putative polysaccharide deacetylase-related protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2177
symbol: mltA
gene_biotype: protein_coding
description:
  Membrane-bound lytic murein transglycosylase family protein; Murein-degrading enzyme. May play a role in recycling of muropeptides during cell elongation and/or cell division.


ensembl_gene_id: LFA_2186
symbol: hisC-2
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase 2; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: LFA_2187
symbol: LFA_2187
gene_biotype: protein_coding
description:
  Putative pterin-4-alpha-carbinolamine dehydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2191
symbol: secF
gene_biotype: protein_coding
description:
  SecYEG protein translocase auxillary subunit; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: LFA_2193
symbol: yajC
gene_biotype: protein_coding
description:
  SecYEG protein translocase auxillary subunit; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: LFA_2195
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: LFA_2198
symbol: pieE
gene_biotype: protein_coding
description:
  Putative substrate of the Dot/Icm secretion system [5 coiled coil domains]; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.


ensembl_gene_id: LFA_2204
symbol: spoT
gene_biotype: protein_coding
description:
  Bifunctional (p)ppGpp synthetase II and guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: LFA_2205
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: LFA_2207
symbol: LFA_2207
gene_biotype: protein_coding
description:
  Uncharacterized stress-induced protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_2208
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: LFA_2211
symbol: LFA_2211
gene_biotype: protein_coding
description:
  Putative proline/betaine transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2212
symbol: pilT
gene_biotype: protein_coding
description:
  Twitching motility protein; Function of homologous gene experimentally demonstrated in an other organism; phenotype.


ensembl_gene_id: LFA_2213
symbol: yggS
gene_biotype: protein_coding
description:
  Putative enzyme; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: LFA_2214
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase (P5CR) (P5C reductase); Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: LFA_2222
symbol: ahcY
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: LFA_2223
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase 1; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: LFA_2224
symbol: carA
gene_biotype: protein_coding
description:
  Carbamoyl phosphate synthetase small subunit, glutamine amidotransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the CarA family.


ensembl_gene_id: LFA_2225
symbol: dnaJ
gene_biotype: protein_coding
description:
  Chaperone Hsp40, co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interaction [...]


ensembl_gene_id: LFA_2226
symbol: dnaK
gene_biotype: protein_coding
description:
  Chaperone Hsp70 in DNA biosynthesis/cell division; Acts as a chaperone; Belongs to the heat shock protein 70 family.


ensembl_gene_id: LFA_2227
symbol: grpE
gene_biotype: protein_coding
description:
  Protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...]


ensembl_gene_id: LFA_2230
symbol: yheT
gene_biotype: protein_coding
description:
  Putative esterase YheT; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2231
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: LFA_2232
symbol: LFA_2232
gene_biotype: protein_coding
description:
  Putative Dihydroneopterin aldolase FolB, kinase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: LFA_2238
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: LFA_2239
symbol: LFA_2239
gene_biotype: protein_coding
description:
  Cation efflux family protein; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: LFA_2241
symbol: LFA_2241
gene_biotype: protein_coding
description:
  Maf-like protein LPC_1522; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: LFA_2242
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.


ensembl_gene_id: LFA_2243
symbol: ftsB
gene_biotype: protein_coding
description:
  Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: LFA_2248
symbol: queE
gene_biotype: protein_coding
description:
  7-carboxy-7-deazaguanine synthase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: LFA_2249
symbol: cpoB
gene_biotype: protein_coding
description:
  Tetratricopeptide repeat protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.


ensembl_gene_id: LFA_2250
symbol: pal
gene_biotype: protein_coding
description:
  Peptidoglycan-associated lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: LFA_2254
symbol: LFA_2254
gene_biotype: protein_coding
description:
  Putative ABC transport system permease protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2261
symbol: fni
gene_biotype: protein_coding
description:
  Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).


ensembl_gene_id: LFA_2293
symbol: rapA
gene_biotype: protein_coding
description:
  RNA polymerase-associated protein RapA; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily.


ensembl_gene_id: LFA_2295
symbol: yjjG
gene_biotype: protein_coding
description:
  dUMP phosphatase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_2298
symbol: LFA_2298
gene_biotype: protein_coding
description:
  Putative restriction endonuclease-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2299
symbol: LFA_2299
gene_biotype: protein_coding
description:
  Putative MgtC family protein (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2306
symbol: AnkH
gene_biotype: protein_coding
description:
  Substrate of the Dot/Icm secretion system [ankyrin repeat]; Function of strongly homologous gene; factor.


ensembl_gene_id: LFA_2307
symbol: LFA_2307
gene_biotype: protein_coding
description:
  Putative Smr domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2308
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: LFA_2309
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: LFA_2310
symbol: prmB
gene_biotype: protein_coding
description:
  N5-glutamine methyltransferase; Specifically methylates the 50S ribosomal protein L3 on a specific glutamine residue; Belongs to the protein N5-glutamine methyltransferase family. PrmB subfamily.


ensembl_gene_id: LFA_2313
symbol: grxC
gene_biotype: protein_coding
description:
  Glutaredoxin 3; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.


ensembl_gene_id: LFA_2314
symbol: secB
gene_biotype: protein_coding
description:
  Protein export chaperone; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.


ensembl_gene_id: LFA_2315
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase (NAD+); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: LFA_2319
symbol: LFA_2319
gene_biotype: protein_coding
description:
  Putative Interaptin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2323
symbol: dapA
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: LFA_2328
symbol: motA-2
gene_biotype: protein_coding
description:
  Proton conductor component of flagella motor; Function of homologous gene experimentally demonstrated in an other organism; cell process.


ensembl_gene_id: LFA_2329
symbol: motB-2
gene_biotype: protein_coding
description:
  Protein that enables flagellar motor rotation; Function of homologous gene experimentally demonstrated in an other organism; cell process.


ensembl_gene_id: LFA_2331
symbol: sdaC
gene_biotype: protein_coding
description:
  Putative serine transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.


ensembl_gene_id: LFA_2332
symbol: AnkK
gene_biotype: protein_coding
description:
  Substrate of the Dot/Icm secretion system [ankyrin repeat][coiled coil domain]; Function of strongly homologous gene; factor.


ensembl_gene_id: LFA_2335
symbol: radA
gene_biotype: protein_coding
description:
  Repair protein radA homolog; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: LFA_2338
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease 7 small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: LFA_2340
symbol: bioC
gene_biotype: protein_coding
description:
  Malonyl-[acyl-carrier protein] O-methyltransferase; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway.


ensembl_gene_id: LFA_2344
symbol: hemA
gene_biotype: protein_coding
description:
  Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: LFA_2345
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor RF-1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: LFA_2346
symbol: prmC
gene_biotype: protein_coding
description:
  N5-glutamine methyltransferase, modifies release factors RF-1 and RF-2; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: LFA_2347
symbol: dksA
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression.


ensembl_gene_id: LFA_2351
symbol: LFA_2351
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, TetR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2357
symbol: LFA_2357
gene_biotype: protein_coding
description:
  Putative coiled-coil protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2364
symbol: LFA_2364
gene_biotype: protein_coding
description:
  Putative Acyl-CoA synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2367
symbol: adhA
gene_biotype: protein_coding
description:
  Putative alcohol dehydrogenase AdhA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2369
symbol: LFA_2369
gene_biotype: protein_coding
description:
  RNA ligase/cyclic nucleotide phosphodiesterase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: LFA_2370
symbol: cfa
gene_biotype: protein_coding
description:
  Cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_2371
symbol: LFA_2371
gene_biotype: protein_coding
description:
  Putative Phosphoesterase, PAP2 family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2372
symbol: LFA_2372
gene_biotype: protein_coding
description:
  Putative D-alanyl-D-alanine-carboxypeptidase/endopeptidase AmpH; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2379
symbol: LFA_2379
gene_biotype: protein_coding
description:
  Putative metal dependent phosphohydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2382
symbol: atpA
gene_biotype: protein_coding
description:
  ATP synthase subunit alpha 1; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: LFA_2384
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase subunit c 2; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: LFA_2385
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: LFA_2386
symbol: LFA_2386
gene_biotype: protein_coding
description:
  Putative ATP synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2390
symbol: LFA_2390
gene_biotype: protein_coding
description:
  Putative phosphoketolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2391
symbol: LFA_2391
gene_biotype: protein_coding
description:
  Homologs of previously reported genes of unknown function; Belongs to the ribose-phosphate pyrophosphokinase family.


ensembl_gene_id: LFA_2392
symbol: LFA_2392
gene_biotype: protein_coding
description:
  Putative thymidine phosphorylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2397
symbol: LFA_2397
gene_biotype: protein_coding
description:
  Putative cation transport ATPase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2401
symbol: LFA_2401
gene_biotype: protein_coding
description:
  Putative integral membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2416
symbol: LFA_2416
gene_biotype: protein_coding
description:
  Putative integrase/recombinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the 'phage' integrase family.


ensembl_gene_id: LFA_2422
symbol: LFA_2422
gene_biotype: protein_coding
description:
  Streptomycin 3''-adenylyltransferase; Mediates bacterial resistance to the antibiotics streptomycin and spectomycin.


ensembl_gene_id: LFA_2425
symbol: LFA_2425
gene_biotype: protein_coding
description:
  Putative hydrolase or acyltransferase of alpha/beta superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2426
symbol: LFA_2426
gene_biotype: protein_coding
description:
  Putative Methyltransferase type 11; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2459
symbol: aroK-5
gene_biotype: protein_coding
description:
  Shikimate kinase (fragment); Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: LFA_2474
symbol: LFA_2474
gene_biotype: protein_coding
description:
  Conserved protein of unknown function [Beta-lactamase domain]; Homologs of previously reported genes of unknown function.


ensembl_gene_id: LFA_2478
symbol: LFA_2478
gene_biotype: protein_coding
description:
  Putative acetyltransferase, GNAT family (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2479
symbol: LFA_2479
gene_biotype: protein_coding
description:
  Putative aminoglycoside phosphotransferase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2514
symbol: LFA_2514
gene_biotype: protein_coding
description:
  Putative Phosphatidylcholine--sterol O-acyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2518
symbol: LFA_2518
gene_biotype: protein_coding
description:
  Putative Serine-type D-Ala-D-Ala carboxypeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2519
symbol: parB
gene_biotype: protein_coding
description:
  Putative chromosome-partitioning protein ParB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the ParB family.


ensembl_gene_id: LFA_2521
symbol: LFA_2521
gene_biotype: protein_coding
description:
  Putative Long-chain-fatty-acid--AMP ligase FadD29; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2522
symbol: LFA_2522
gene_biotype: protein_coding
description:
  Choline monooxygenase with Rieske [2Fe-2S] domain, alcE; Function of strongly homologous gene; enzyme.


ensembl_gene_id: LFA_2523
symbol: LFA_2523
gene_biotype: protein_coding
description:
  Putative esterase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2525
symbol: rsmB
gene_biotype: protein_coding
description:
  16S rRNA m5C967 methyltransferase, S-adenosyl-L-methionine-dependent; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: LFA_2526
symbol: fmt
gene_biotype: protein_coding
description:
  10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: LFA_2531
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: LFA_2542
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-acyl N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: LFA_2543
symbol: ftsZ
gene_biotype: protein_coding
description:
  GTP-binding tubulin-like cell division protein; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: LFA_2544
symbol: ftsA
gene_biotype: protein_coding
description:
  ATP-binding cell division protein involved in recruitment of FtsK to Z ring; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: LFA_2545
symbol: ftsQ
gene_biotype: protein_coding
description:
  Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly.


ensembl_gene_id: LFA_2546
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: LFA_2549
symbol: ftsW
gene_biotype: protein_coding
description:
  Integral membrane protein involved in stabilizing FstZ ring during cell division; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily.


ensembl_gene_id: LFA_2550
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: LFA_2551
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: LFA_2552
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: LFA_2553
symbol: zipA
gene_biotype: protein_coding
description:
  Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family.


ensembl_gene_id: LFA_2554
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome segregation SMC protein [10 coiled coil domains]; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: LFA_2559
symbol: LFA_2559
gene_biotype: protein_coding
description:
  Putative hypothtical protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2560
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: LFA_2561
symbol: carB
gene_biotype: protein_coding
description:
  Carbamoyl-phosphate synthase, large subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the CarB family.


ensembl_gene_id: LFA_2566
symbol: LFA_2566
gene_biotype: protein_coding
description:
  Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2569
symbol: yhiN
gene_biotype: protein_coding
description:
  Putative oxidoreductase with FAD/NAD(P)-binding domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_2577
symbol: pepA
gene_biotype: protein_coding
description:
  Aminopeptidase A, a cyteinylglycinase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: LFA_2581
symbol: murJ
gene_biotype: protein_coding
description:
  Protein MurJ homolog; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: LFA_2584
symbol: LFA_2584
gene_biotype: protein_coding
description:
  Enhanced entry protein EnhC [B-lactamase][TRP domain][Sel1-domain]; Function of strongly homologous gene; factor.


ensembl_gene_id: LFA_2587
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease UvrABC, endonuclease subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: LFA_2588
symbol: uvrY
gene_biotype: protein_coding
description:
  DNA-binding response regulator in two-component regulatory system with BarA; Function of homologous gene experimentally demonstrated in an other organism; regulator.


ensembl_gene_id: LFA_2591
symbol: obgE
gene_biotype: protein_coding
description:
  GTPase involved in cell partioning and DNA repair; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: LFA_2592
symbol: rpmA
gene_biotype: protein_coding
description:
  50S ribosomal protein L27; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL27 family.


ensembl_gene_id: LFA_2593
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal subunit protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: LFA_2594
symbol: rplY
gene_biotype: protein_coding
description:
  50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: LFA_2595
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: LFA_2596
symbol: ychF
gene_biotype: protein_coding
description:
  Putative GTP-binding protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: LFA_2598
symbol: ispB
gene_biotype: protein_coding
description:
  Octaprenyl diphosphate synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: LFA_2601
symbol: LFA_2601
gene_biotype: protein_coding
description:
  Putative HAD-superfamily hydrolase subfamily IB, PSPase-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2607
symbol: adc
gene_biotype: protein_coding
description:
  Putative acetoacetate decarboxylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2608
symbol: LFA_2608
gene_biotype: protein_coding
description:
  Putative phospholipase, patatin family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2611
symbol: LFA_2611
gene_biotype: protein_coding
description:
  Putative Leucine-rich repeat protein Substrate of the Dot/Icm secretion system; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2612
symbol: LFA_2612
gene_biotype: protein_coding
description:
  Response regulator receiver:Metal-dependent phosphohydrolase, HD subdomain; Function of strongly homologous gene; regulator.


ensembl_gene_id: LFA_2617
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: LFA_2618
symbol: crcB
gene_biotype: protein_coding
description:
  Putative fluoride ion transporter CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: LFA_2619
symbol: lpxA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine acetyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: LFA_2620
symbol: fabZ
gene_biotype: protein_coding
description:
  (3R)-hydroxymyristol acyl carrier protein dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: LFA_2624
symbol: bamA
gene_biotype: protein_coding
description:
  Outer membrane protein assembly factor BamA; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: LFA_2625
symbol: yaeL
gene_biotype: protein_coding
description:
  Zinc metallopeptidase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_2627
symbol: ispU
gene_biotype: protein_coding
description:
  Undecaprenyl pyrophosphate synthase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di- trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide.


ensembl_gene_id: LFA_2630
symbol: gpmI
gene_biotype: protein_coding
description:
  Phosphoglycero mutase III, cofactor-independent; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: LFA_2638
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: LFA_2640
symbol: hflK
gene_biotype: protein_coding
description:
  Modulator for HflB protease specific for phage lambda cII repressor; HflC and HflK could encode or regulate a protease.


ensembl_gene_id: LFA_2642
symbol: yggH
gene_biotype: protein_coding
description:
  tRNA (m7G46) methyltransferase, SAM-dependent; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: LFA_2643
symbol: rpmB
gene_biotype: protein_coding
description:
  50S ribosomal protein L28; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL28 family.


ensembl_gene_id: LFA_2644
symbol: rpmG
gene_biotype: protein_coding
description:
  50S ribosomal protein L33; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL33 family.


ensembl_gene_id: LFA_2645
symbol: rpoN
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 54 (sigma N) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: LFA_2648
symbol: LFA_2648
gene_biotype: protein_coding
description:
  CDP-diacylglycerol-serine-O- phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: LFA_2651
symbol: dotV
gene_biotype: protein_coding
description:
  dotV membrane protein of dot/Icm type IV secretion system; Function of strongly homologous gene; membrane component.


ensembl_gene_id: LFA_2655
symbol: LFA_2655
gene_biotype: protein_coding
description:
  Putative lipase LipA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2658
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: LFA_2659
symbol: accB
gene_biotype: protein_coding
description:
  Acetyl CoA carboxylase, BCCP subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: LFA_2660
symbol: accC
gene_biotype: protein_coding
description:
  Biotin carboxylase (A subunit of acetyl-CoA carboxylase); This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: LFA_2661
symbol: prmA
gene_biotype: protein_coding
description:
  Methylase for 50S ribosomal subunit protein L11; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: LFA_2662
symbol: purH
gene_biotype: protein_coding
description:
  Fused IMP cyclohydrolase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_2666
symbol: icmJ/dotN
gene_biotype: protein_coding
description:
  Component of the Dot/Icm secretion system. Probable ATPase component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.


ensembl_gene_id: LFA_2667
symbol: icmD/DotP
gene_biotype: protein_coding
description:
  Component of the Dot/Icm secretion system. Predicted innermembrane protein; Function of strongly homologous gene; membrane component.


ensembl_gene_id: LFA_2671
symbol: icmE/dotG
gene_biotype: protein_coding
description:
  Component of the Dot/Icm secretion system. Major component of a channel; Function of strongly homologous gene; structure.


ensembl_gene_id: LFA_2673
symbol: icmL/dotI
gene_biotype: protein_coding
description:
  Component of the Dot/Icm secretion system. Inner membrane protein; Function of strongly homologous gene; membrane component.


ensembl_gene_id: LFA_2674
symbol: icmM/dotJ
gene_biotype: protein_coding
description:
  Component of the Dot/Icm secretion system. Predicted inner membrane protein; Function of strongly homologous gene; membrane component.


ensembl_gene_id: LFA_2675
symbol: IcmN/DotK
gene_biotype: protein_coding
description:
  Component of the Dot/Icm secretion system. Lipoprotein of the OmpA protein family; Function of strongly homologous gene; lipoprotein.


ensembl_gene_id: LFA_2678
symbol: icmP/dotM
gene_biotype: protein_coding
description:
  Component of Dot/Icm secretion system. ATPase component; Homologs of previously reported genes of unknown function; structure.


ensembl_gene_id: LFA_2681
symbol: icmS
gene_biotype: protein_coding
description:
  Component of Dot/Icm secretion system. Substrate recognition; Function of strongly homologous gene; factor.


ensembl_gene_id: LFA_2685
symbol: cspD
gene_biotype: protein_coding
description:
  Cold shock protein homolog; Function of homologous gene experimentally demonstrated in an other organism; factor.


ensembl_gene_id: LFA_2686
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: LFA_2687
symbol: LFA_2687
gene_biotype: protein_coding
description:
  RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: LFA_2688
symbol: LFA_2688
gene_biotype: protein_coding
description:
  Putative integral membrane protein, AcrB/AcrD/AcrF family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: LFA_2691
symbol: ywtG
gene_biotype: protein_coding
description:
  Putative metabolite transport protein YwtG; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: LFA_2692
symbol: eda
gene_biotype: protein_coding
description:
  2-dehydro-3-deoxyphosphogluconate aldolase / (4S)-4-hydroxy-2-oxoglutarate aldolase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_2694
symbol: edd
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydratase; Catalyzes the dehydration of 6-phospho-D-gluconate to 2- dehydro-3-deoxy-6-phospho-D-gluconate; Belongs to the IlvD/Edd family.


ensembl_gene_id: LFA_2696
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: LFA_2699
symbol: rimK
gene_biotype: protein_coding
description:
  Ribosomal protein S6 modification protein; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the RimK family.


ensembl_gene_id: LFA_2703
symbol: cyoE
gene_biotype: protein_coding
description:
  Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.


ensembl_gene_id: LFA_2708
symbol: LFA_2708
gene_biotype: protein_coding
description:
  Putative inner membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2709
symbol: LFA_2709
gene_biotype: protein_coding
description:
  Putative phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2710
symbol: LFA_2710
gene_biotype: protein_coding
description:
  Putative Carboxymuconolactone decarboxylase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: LFA_2713
symbol: LFA_2713
gene_biotype: protein_coding
description:
  Putative penicillin amidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2717
symbol: ffh
gene_biotype: protein_coding
description:
  Signal Recognition Particle (SRP) component with 4.5S RNA (ffs); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex  [...]


ensembl_gene_id: LFA_2718
symbol: rpsP
gene_biotype: protein_coding
description:
  30S ribosomal subunit protein S16; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bS16 family.


ensembl_gene_id: LFA_2719
symbol: rimM
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: LFA_2720
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-1-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: LFA_2721
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: LFA_2725
symbol: LFA_2725
gene_biotype: protein_coding
description:
  Putative zinc metalloprotease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2730
symbol: yadH
gene_biotype: protein_coding
description:
  Putative transporter subunit: membrane component of ABC superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.


ensembl_gene_id: LFA_2733
symbol: uvrA
gene_biotype: protein_coding
description:
  ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: LFA_2740
symbol: LFA_2740
gene_biotype: protein_coding
description:
  Putative HAD family hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2742
symbol: LFA_2742
gene_biotype: protein_coding
description:
  Conserved membrane protein of unknown function; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: LFA_2747
symbol: fur-2
gene_biotype: protein_coding
description:
  Negative regulator of ferric iron uptake; Function of homologous gene experimentally demonstrated in an other organism; regulator; Belongs to the Fur family.


ensembl_gene_id: LFA_2749
symbol: LFA_2749
gene_biotype: protein_coding
description:
  Putative transmembrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2761
symbol: kdpC
gene_biotype: protein_coding
description:
  Potassium translocating ATPase, subunit C; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.


ensembl_gene_id: LFA_2762
symbol: kdpB
gene_biotype: protein_coding
description:
  Potassium translocating ATPase, subunit B; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily.


ensembl_gene_id: LFA_2763
symbol: kdpA
gene_biotype: protein_coding
description:
  Potassium translocating ATPase, subunit A; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane.


ensembl_gene_id: LFA_2771
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: LFA_2775
symbol: waaM
gene_biotype: protein_coding
description:
  Putative lipid A biosynthesis acyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_2776
symbol: LFA_2776
gene_biotype: protein_coding
description:
  Putative Beta-ketoacyl-acyl-carrier-protein synthase I; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: LFA_2782
symbol: ssb
gene_biotype: protein_coding
description:
  Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: LFA_2783
symbol: rplQ
gene_biotype: protein_coding
description:
  50S ribosomal protein L17; Function of homologous gene experimentally demonstrated in an other organism; structure.


ensembl_gene_id: LFA_2784
symbol: rpoA
gene_biotype: protein_coding
description:
  RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: LFA_2785
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal subunit protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: LFA_2786
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: LFA_2787
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: LFA_2788
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase membrane subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: LFA_2789
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal subunit protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: LFA_2790
symbol: rpmD
gene_biotype: protein_coding
description:
  50S ribosomal subunit protein L30; Function of homologous gene experimentally demonstrated in an other organism; structure.


ensembl_gene_id: LFA_2791
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal subunit protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: LFA_2792
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal subunit protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: LFA_2793
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal subunit protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: LFA_2794
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal subunit protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: LFA_2795
symbol: rpsN
gene_biotype: protein_coding
description:
  30S ribosomal subunit protein S14; Function of homologous gene experimentally demonstrated in an other organism; structure.


ensembl_gene_id: LFA_2796
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: LFA_2797
symbol: rplX
gene_biotype: protein_coding
description:
  50S ribosomal subunit protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: LFA_2798
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: LFA_2799
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: LFA_2800
symbol: rpmC
gene_biotype: protein_coding
description:
  50S ribosomal subunit protein L29; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the universal ribosomal protein uL29 family.


ensembl_gene_id: LFA_2801
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: LFA_2802
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: LFA_2803
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: LFA_2804
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: LFA_2805
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: LFA_2806
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal subunit protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: LFA_2808
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.


ensembl_gene_id: LFA_2809
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: LFA_2810
symbol: tufB
gene_biotype: protein_coding
description:
  Protein chain elongation factor EF-Tu, possible GTP-binding factor (duplicate of tufA); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: LFA_2811
symbol: fusA
gene_biotype: protein_coding
description:
  Protein chain elongation factor EF-G, GTP-binding; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase f [...]


ensembl_gene_id: LFA_2812
symbol: rpsG
gene_biotype: protein_coding
description:
  30S ribosomal subunit protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: LFA_2813
symbol: rpsL
gene_biotype: protein_coding
description:
  30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: LFA_2814
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase beta' chain (Transcriptase beta' chain) (RNA polymerase beta' subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: LFA_2815
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase beta chain (Transcriptase beta chain) (RNA polymerase beta subunit); DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: LFA_2816
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: LFA_2817
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal subunit protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: LFA_2818
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: LFA_2819
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: LFA_2820
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: LFA_2821
symbol: secE
gene_biotype: protein_coding
description:
  Protein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family.


ensembl_gene_id: LFA_2822
symbol: tufB-2
gene_biotype: protein_coding
description:
  Protein chain elongation factor EF-Tu, possible GTP-binding factor (duplicate of tufA); Function of homologous gene experimentally demonstrated in an other organism; factor.


ensembl_gene_id: LFA_2826
symbol: parE
gene_biotype: protein_coding
description:
  DNA topoisomerase IV, subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily.


ensembl_gene_id: LFA_2829
symbol: groEL
gene_biotype: protein_coding
description:
  Chaperone Hsp60, peptide-dependent ATPase, heat shock protein; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: LFA_2830
symbol: groES
gene_biotype: protein_coding
description:
  Chaperone Hsp10, affects cell division; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: LFA_2832
symbol: rimO
gene_biotype: protein_coding
description:
  Protein of unknown function; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: LFA_2837
symbol: glnE
gene_biotype: protein_coding
description:
  Glutamate-ammonia-ligase adenylyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the signal transd [...]


ensembl_gene_id: LFA_2840
symbol: rpe
gene_biotype: protein_coding
description:
  D-ribulose-5-phosphate 3-epimerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the ribulose-phosphate 3-epimerase family.


ensembl_gene_id: LFA_2847
symbol: ugpQ
gene_biotype: protein_coding
description:
  Glycerophosphodiester phosphodiesterase, cytosolic; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_2854
symbol: maiA
gene_biotype: protein_coding
description:
  Putative maleylacetoacetate isomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2857
symbol: asnS
gene_biotype: protein_coding
description:
  Asparaginyl tRNA synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_2859
symbol: lolD
gene_biotype: protein_coding
description:
  Outer membrane-specific lipoprotein transporter subunit; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.


ensembl_gene_id: LFA_2870
symbol: pgsA
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphate synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: LFA_2872
symbol: rluC
gene_biotype: protein_coding
description:
  23S rRNA pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: LFA_2881
symbol: LFA_2881
gene_biotype: protein_coding
description:
  Putative conjugative transfer relaxase protein TraI; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_2886
symbol: LFA_2886
gene_biotype: protein_coding
description:
  Putative type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_2889
symbol: LFA_2889
gene_biotype: protein_coding
description:
  Putative type-F conjugative transfer system pilin assembly protein TrbC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.


ensembl_gene_id: LFA_2892
symbol: LFA_2892
gene_biotype: protein_coding
description:
  Putative F pilus extension/retraction protein trbI; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.


ensembl_gene_id: LFA_2894
symbol: LFA_2894
gene_biotype: protein_coding
description:
  Putative Type IV conjugative transfer system protein TraV; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.


ensembl_gene_id: LFA_2895
symbol: LFA_2895
gene_biotype: protein_coding
description:
  Putative conjugative transfer protein TraB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2896
symbol: LFA_2896
gene_biotype: protein_coding
description:
  Putative conjugative transfer protein TraK; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.


ensembl_gene_id: LFA_2897
symbol: LFA_2897
gene_biotype: protein_coding
description:
  Putative conjugative transfer protein TraE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.


ensembl_gene_id: LFA_2898
symbol: LFA_2898
gene_biotype: protein_coding
description:
  Putative Sex pilus assembly and synthesis protein traL; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.


ensembl_gene_id: LFA_2899
symbol: LFA_2899
gene_biotype: protein_coding
description:
  Putative F fimbriae pilin protein (traA); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.


ensembl_gene_id: LFA_2900
symbol: csrA-4
gene_biotype: protein_coding
description:
  Pleiotropic regulatory protein for carbon source metabolism (modular protein); A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is an [...]


ensembl_gene_id: LFA_2903
symbol: LFA_2903
gene_biotype: protein_coding
description:
  Putative phage repressor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; factor.


ensembl_gene_id: LFA_2904
symbol: LFA_2904
gene_biotype: protein_coding
description:
  Putative protein kinase-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_2909
symbol: LFA_2909
gene_biotype: protein_coding
description:
  Putative aminoglycoside phosphotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_2915
symbol: LFA_2915
gene_biotype: protein_coding
description:
  Putative Aminoglycoside N(6')-acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_2946
symbol: LFA_2946
gene_biotype: protein_coding
description:
  Putative aminoglycoside phosphotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_2967
symbol: LFA_2967
gene_biotype: protein_coding
description:
  TetR family transcriptional regulator-like protein; Function of strongly homologous gene; regulator.


ensembl_gene_id: LFA_2970
symbol: LFA_2970
gene_biotype: protein_coding
description:
  Cytochrome c biogenesis protein [Thioredoxin fold]; Function of strongly homologous gene; membrane component.


ensembl_gene_id: LFA_2987
symbol: bcsB
gene_biotype: protein_coding
description:
  Cyclic di-GMP-binding protein; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.


ensembl_gene_id: LFA_2988
symbol: bcsA
gene_biotype: protein_coding
description:
  Cellulose synthase catalytic subunit [UDP-forming]; Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose.


ensembl_gene_id: LFA_3001
symbol: rffA
gene_biotype: protein_coding
description:
  TDP-4-oxo-6-deoxy-D-glucose transaminase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: LFA_3011
symbol: pimF
gene_biotype: protein_coding
description:
  Putative glycosyltransferases; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3030
symbol: LFA_3030
gene_biotype: protein_coding
description:
  Putative sphingosine-1-phosphate lyase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3055
symbol: LFA_3055
gene_biotype: protein_coding
description:
  Putative Adenylate/guanylate cyclase catalytic domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3061
symbol: LFA_3061
gene_biotype: protein_coding
description:
  Two component response regulator with GGDEF domain (Fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.


ensembl_gene_id: LFA_3069
symbol: LFA_3069
gene_biotype: protein_coding
description:
  Putative nitroreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3074
symbol: def-3
gene_biotype: protein_coding
description:
  Peptide deformylase 1; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: LFA_3076
symbol: LFA_3076
gene_biotype: protein_coding
description:
  Putative Na+/H+ antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.


ensembl_gene_id: LFA_3080
symbol: LFA_3080
gene_biotype: protein_coding
description:
  Zinc-binding alcohol dehydrogenase family protein; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.


ensembl_gene_id: LFA_3092
symbol: lpnE
gene_biotype: protein_coding
description:
  Transcriptional regulator, LysR family protein (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.


ensembl_gene_id: LFA_3095
symbol: thiC
gene_biotype: protein_coding
description:
  Thiamin (pyrimidine moiety) biosynthesis protein; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.


ensembl_gene_id: LFA_3100
symbol: LFA_3100
gene_biotype: protein_coding
description:
  Putative Diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_3101
symbol: URC
gene_biotype: protein_coding
description:
  Putative GTP cyclohydrolase URC1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3103
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: LFA_3106
symbol: dedA
gene_biotype: protein_coding
description:
  Transmembrane protein DedA family protein; Function of strongly homologous gene; membrane component.


ensembl_gene_id: LFA_3110
symbol: LFA_3110
gene_biotype: protein_coding
description:
  Homologs of previously reported genes of unknown function; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: LFA_3123
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: LFA_3124
symbol: cbpA
gene_biotype: protein_coding
description:
  Curved DNA-binding protein, DnaJ homologue that functions as a co-chaperone of DnaK; Function of homologous gene experimentally demonstrated in an other organism; factor.


ensembl_gene_id: LFA_3137
symbol: LFA_3137
gene_biotype: protein_coding
description:
  Putative tyrosine-specific transport protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3140
symbol: LFA_3140
gene_biotype: protein_coding
description:
  Putative Undecaprenyl-phosphomannose:protein mannosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3142
symbol: LFA_3142
gene_biotype: protein_coding
description:
  Putative carbonic anhydrase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3154
symbol: hslU
gene_biotype: protein_coding
description:
  Molecular chaperone and ATPase component of HslUV protease; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: LFA_3155
symbol: hslV
gene_biotype: protein_coding
description:
  Peptidase component of the HslUV protease; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: LFA_3157
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: LFA_3160
symbol: tdk
gene_biotype: protein_coding
description:
  Thymidine kinase/deoxyuridine kinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_3161
symbol: LFA_3161
gene_biotype: protein_coding
description:
  Putative melitin resistence protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3166
symbol: LFA_3166
gene_biotype: protein_coding
description:
  Putative type IV prepilin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.


ensembl_gene_id: LFA_3171
symbol: LFA_3171
gene_biotype: protein_coding
description:
  Putative type-4 fimbrial biogenesis pilY1-related protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative structure.


ensembl_gene_id: LFA_3174
symbol: LFA_3174
gene_biotype: protein_coding
description:
  Putative regulatory protein Ada; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3184
symbol: qxtB
gene_biotype: protein_coding
description:
  Cytochrome d ubiquinol oxidase subunit 2; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_3187
symbol: LFA_3187
gene_biotype: protein_coding
description:
  Putative cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_3188
symbol: LFA_3188
gene_biotype: protein_coding
description:
  Putative acetyltransferase (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3194
symbol: LFA_3194
gene_biotype: protein_coding
description:
  Putative Sensory box protein (GGDEF domain/EAL domain); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3198
symbol: queF
gene_biotype: protein_coding
description:
  NADPH-dependent 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1).


ensembl_gene_id: LFA_3199
symbol: LFA_3199
gene_biotype: protein_coding
description:
  Putative Uncharacterized metallophosphoesterase HP_1044; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3200
symbol: rutE
gene_biotype: protein_coding
description:
  Oxidoreductase subunit of the alternative pyrimidine degradation pathway; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_3203
symbol: LFA_3203
gene_biotype: protein_coding
description:
  Putative alpha/beta hydrolase R526; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3204
symbol: LFA_3204
gene_biotype: protein_coding
description:
  Putative Protein SidA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3207
symbol: LFA_3207
gene_biotype: protein_coding
description:
  Uncharacterized transporter HI_0895; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: LFA_3211
symbol: LFA_3211
gene_biotype: protein_coding
description:
  Putative Coiled-coil protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3215
symbol: LFA_3215
gene_biotype: protein_coding
description:
  Putative Glutamine ABC transporter, periplasmic glutamine-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: LFA_3221
symbol: LFA_3221
gene_biotype: protein_coding
description:
  Putative FAD/FMN-containing dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_3222
symbol: LFA_3222
gene_biotype: protein_coding
description:
  Dehydrogenase/reductase SDR family protein 7-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: LFA_3238
symbol: LFA_3238
gene_biotype: protein_coding
description:
  Putative D-Ala-D-Ala carboxypeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3240
symbol: waaA
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonic acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: LFA_3241
symbol: djlA
gene_biotype: protein_coding
description:
  DnaJ-like protein DjlA; Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB/RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host.


ensembl_gene_id: LFA_3245
symbol: deaD
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase DeaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.


ensembl_gene_id: LFA_3246
symbol: fadH
gene_biotype: protein_coding
description:
  2,4-dienoyl-CoA reductase, NADH and FMN-linked; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_3247
symbol: LFA_3247
gene_biotype: protein_coding
description:
  Putative drug/metabolite transporter superfamily protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3248
symbol: sodC
gene_biotype: protein_coding
description:
  Superoxide dismutase [Cu-Zn]; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.


ensembl_gene_id: LFA_3249
symbol: ahpD
gene_biotype: protein_coding
description:
  Alkyl hydroperoxide reductase AhpD; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: LFA_3252
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.


ensembl_gene_id: LFA_3253
symbol: nudE
gene_biotype: protein_coding
description:
  ADP-ribose diphosphatase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_3254
symbol: LFA_3254
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen-III oxidase-like protein HI_0463; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: LFA_3255
symbol: plsY
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: LFA_3257
symbol: gcp
gene_biotype: protein_coding
description:
  O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: LFA_3258
symbol: rpsU
gene_biotype: protein_coding
description:
  30S ribosomal protein S21; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bS21 family.


ensembl_gene_id: LFA_3260
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: LFA_3261
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 70 (sigma D) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: LFA_3264
symbol: LFA_3264
gene_biotype: protein_coding
description:
  Putative secreted protein (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3266
symbol: LFA_3266
gene_biotype: protein_coding
description:
  Putative Glutamate racemase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: LFA_3277
symbol: LFA_3277
gene_biotype: protein_coding
description:
  Putative Dot/Icm T4SS effector [RasGEF domain]; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.


ensembl_gene_id: LFA_3283
symbol: rbbA
gene_biotype: protein_coding
description:
  Fused ribosome-associated ATPase: ATP-binding protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_3284
symbol: yhiI
gene_biotype: protein_coding
description:
  Putative HlyD family secretion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.


ensembl_gene_id: LFA_3286
symbol: nhaA
gene_biotype: protein_coding
description:
  Na(+)/H(+) antiporter NhaA 2; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.


ensembl_gene_id: LFA_3305
symbol: LFA_3305
gene_biotype: protein_coding
description:
  Putative secreted protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3309
symbol: LFA_3309
gene_biotype: protein_coding
description:
  Putative Amidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3313
symbol: LFA_3313
gene_biotype: protein_coding
description:
  Putative (Serine-type) D-alanyl-D-alanine carboxypeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3322
symbol: LFA_3322
gene_biotype: protein_coding
description:
  Protein of unknown function; No homology to any previously reported sequences; Belongs to the UbiD family.


ensembl_gene_id: LFA_3332
symbol: LFA_3332
gene_biotype: protein_coding
description:
  Putative hexose phosphate transport protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3341
symbol: LFA_3341
gene_biotype: protein_coding
description:
  Homologs of previously reported genes of unknown function; Belongs to the methyltransferase superfamily.


ensembl_gene_id: LFA_3344
symbol: yggV
gene_biotype: protein_coding
description:
  dITP/XTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: LFA_3350
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: LFA_3351
symbol: dfp
gene_biotype: protein_coding
description:
  Fused 4'-phosphopantothenoylcysteine decarboxylase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: LFA_3352
symbol: LFA_3352
gene_biotype: protein_coding
description:
  Protein of unknown function [Uncharacterised protein family RadC]; Homologs of previously reported genes of unknown function; Belongs to the UPF0758 family.


ensembl_gene_id: LFA_3356
symbol: LFA_3356
gene_biotype: protein_coding
description:
  Protein involved in cellulose synthesis (BcsC); Function of strongly homologous gene; putative enzyme.


ensembl_gene_id: LFA_3357
symbol: pgi-2
gene_biotype: protein_coding
description:
  Glucose-6-phosphate isomerase; Function of strongly homologous gene; enzyme; Belongs to the GPI family.


ensembl_gene_id: LFA_3362
symbol: bcsB-2
gene_biotype: protein_coding
description:
  Cellulose synthase BcsB, bacterial; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.


ensembl_gene_id: LFA_3367
symbol: LFA_3367
gene_biotype: protein_coding
description:
  Putative hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_3372
symbol: sufS
gene_biotype: protein_coding
description:
  Selenocysteine lyase, PLP-dependent; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.


ensembl_gene_id: LFA_3374
symbol: sufC
gene_biotype: protein_coding
description:
  Component of SufBCD complex, ATP-binding component of ABC superfamily; Function of homologous gene experimentally demonstrated in an other organism; transporter.


ensembl_gene_id: LFA_3383
symbol: LFA_3383
gene_biotype: protein_coding
description:
  Putative integral inner membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative membrane component.


ensembl_gene_id: LFA_3387
symbol: glnK
gene_biotype: protein_coding
description:
  Nitrogen regulatory protein P-II 2; Function of homologous gene experimentally demonstrated in an other organism; regulator; Belongs to the P(II) protein family.


ensembl_gene_id: LFA_3388
symbol: LFA_3388
gene_biotype: protein_coding
description:
  Putative GCN5-related N-acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_3395
symbol: LFA_3395
gene_biotype: protein_coding
description:
  Putative cation efflux system protein CzcA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: LFA_3398
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: LFA_3399
symbol: yqgF
gene_biotype: protein_coding
description:
  Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: LFA_3403
symbol: LFA_3403
gene_biotype: protein_coding
description:
  Putative phosphate permease HI_1604; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3407
symbol: LFA_3407
gene_biotype: protein_coding
description:
  Putative 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3410
symbol: LFA_3410
gene_biotype: protein_coding
description:
  Protein of unknown function; No homology to any previously reported sequences; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: LFA_3411
symbol: gor
gene_biotype: protein_coding
description:
  Glutathione oxidoreductase; Function of homologous gene experimentally demonstrated in an other organism; carrier.


ensembl_gene_id: LFA_3412
symbol: LFA_3412
gene_biotype: protein_coding
description:
  Putative transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_3416
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III/DNA elongation factor III, tau and gamma subunits; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: LFA_3417
symbol: LFA_3417
gene_biotype: protein_coding
description:
  UPF0133 family protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: LFA_3418
symbol: recR
gene_biotype: protein_coding
description:
  Gap repair protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: LFA_3424
symbol: LFA_3424
gene_biotype: protein_coding
description:
  Putative cation/multidrug efflux pump; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: LFA_3430
symbol: LFA_3430
gene_biotype: protein_coding
description:
  Putative Uncharacterized ABC transporter permease YbbP; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3445
symbol: LFA_3445
gene_biotype: protein_coding
description:
  Putative N-acetylglucosamine-6-phosphate deacetylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3451
symbol: ydiI
gene_biotype: protein_coding
description:
  Putative esterase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_3455
symbol: umuC
gene_biotype: protein_coding
description:
  DNA polymerase V, subunit C; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_3460
symbol: LFA_3460
gene_biotype: protein_coding
description:
  Conserved protein of unknown function; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: LFA_3462
symbol: yibK
gene_biotype: protein_coding
description:
  Putative rRNA methylase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.


ensembl_gene_id: LFA_3466
symbol: LFA_3466
gene_biotype: protein_coding
description:
  Putative hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ). Belongs to the Thz kinase family.


ensembl_gene_id: LFA_3469
symbol: pcoA
gene_biotype: protein_coding
description:
  Fragment of copper resistance protein A precursor (part 1); Function of homologous gene experimentally demonstrated in an other organism; phenotype.


ensembl_gene_id: LFA_3472
symbol: LFA_3472
gene_biotype: protein_coding
description:
  Conserved membrane protein containing CBS domain; Function of strongly homologous gene; membrane component.


ensembl_gene_id: LFA_3473
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: LFA_3475
symbol: hinT
gene_biotype: protein_coding
description:
  Purine nucleoside phosphoramidase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_3477
symbol: pnp
gene_biotype: protein_coding
description:
  Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: LFA_3478
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal subunit protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: LFA_3479
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: LFA_3480
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: LFA_3481
symbol: infB
gene_biotype: protein_coding
description:
  Protein chain initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: LFA_3482
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription termination/antitermination L factor; Participates in both transcription termination and antitermination.


ensembl_gene_id: LFA_3483
symbol: yhbC
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: LFA_3484
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: LFA_3487
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: LFA_3488
symbol: nuoJ
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase chain J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: LFA_3489
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: LFA_3490
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase, membrane subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: LFA_3491
symbol: nuoG
gene_biotype: protein_coding
description:
  NADH dehydrogenase I chain G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.


ensembl_gene_id: LFA_3492
symbol: nuoF
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase, chain F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.


ensembl_gene_id: LFA_3494
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: LFA_3495
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: LFA_3496
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: LFA_3497
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: LFA_3498
symbol: secG
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: LFA_3499
symbol: tpi
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: LFA_3500
symbol: LFA_3500
gene_biotype: protein_coding
description:
  Putative Interaptin [6 coiled coil domains]; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.


ensembl_gene_id: LFA_3502
symbol: folP
gene_biotype: protein_coding
description:
  7,8-dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: LFA_3503
symbol: ftsH-2
gene_biotype: protein_coding
description:
  Protease, ATP-dependent zinc-metallo; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: LFA_3504
symbol: rrmJ
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.


ensembl_gene_id: LFA_3505
symbol: yhbY
gene_biotype: protein_coding
description:
  Putative RNA-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.


ensembl_gene_id: LFA_3508
symbol: LFA_3508
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphate synthase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: LFA_3509
symbol: LFA_3509
gene_biotype: protein_coding
description:
  Homologs of previously reported genes of unknown function; Belongs to the DnaA family. HdA subfamily.


ensembl_gene_id: LFA_3516
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: LFA_3520
symbol: yeaH
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0229 family.


ensembl_gene_id: LFA_3521
symbol: LFA_3521
gene_biotype: protein_coding
description:
  Putative Stage V sporulation protein R; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; factor.


ensembl_gene_id: LFA_3524
symbol: dbpA
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase, specific for 23S rRNA; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the DEAD box helicase family.


ensembl_gene_id: LFA_3527
symbol: azoR
gene_biotype: protein_coding
description:
  FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.


ensembl_gene_id: LFA_3528
symbol: LFA_3528
gene_biotype: protein_coding
description:
  Maf-like protein CLJ_B3262; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: LFA_3531
symbol: rep
gene_biotype: protein_coding
description:
  DNA helicase and single-stranded DNA-dependent ATPase; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction.


ensembl_gene_id: LFA_3537
symbol: LFA_3537
gene_biotype: protein_coding
description:
  Putative Polyamine oxidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3539
symbol: LFA_3539
gene_biotype: protein_coding
description:
  Putative Glutathione S-transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_3542
symbol: dgkA
gene_biotype: protein_coding
description:
  Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.


ensembl_gene_id: LFA_3543
symbol: hslO
gene_biotype: protein_coding
description:
  33 kDa chaperonin; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress; Belongs to the HSP33 family.


ensembl_gene_id: LFA_3545
symbol: bipA
gene_biotype: protein_coding
description:
  GTP-binding protein; Function of homologous gene experimentally demonstrated in an other organism; factor.


ensembl_gene_id: LFA_3546
symbol: ppnK
gene_biotype: protein_coding
description:
  Putative inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: LFA_3548
symbol: cspE
gene_biotype: protein_coding
description:
  DNA-binding transcriptional repressor; Function of homologous gene experimentally demonstrated in an other organism; regulator.


ensembl_gene_id: LFA_3552
symbol: LFA_3552
gene_biotype: protein_coding
description:
  Putative D-isomer specific 2-hydroxyacid dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: LFA_3553
symbol: LFA_3553
gene_biotype: protein_coding
description:
  Putative phosphoserine phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3554
symbol: serC-2
gene_biotype: protein_coding
description:
  Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.


ensembl_gene_id: LFA_3565
symbol: tpm
gene_biotype: protein_coding
description:
  Thiopurine S-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. TPMT family.


ensembl_gene_id: LFA_3566
symbol: glmS
gene_biotype: protein_coding
description:
  L-glutamine:D-fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: LFA_3567
symbol: LFA_3567
gene_biotype: protein_coding
description:
  Putative Lysophospholipase A; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme.


ensembl_gene_id: LFA_3570
symbol: smpB
gene_biotype: protein_coding
description:
  Trans-translation protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switch [...]


ensembl_gene_id: LFA_3571
symbol: ygaF
gene_biotype: protein_coding
description:
  Putative peroxiredoxin YgaF; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3579
symbol: LFA_3579
gene_biotype: protein_coding
description:
  Putative Enterobacter ribonuclease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the RNase T2 family.


ensembl_gene_id: LFA_3581
symbol: cspA-2
gene_biotype: protein_coding
description:
  Major cold shock protein; Function of homologous gene experimentally demonstrated in an other organism; factor.


ensembl_gene_id: LFA_3587
symbol: LFA_3587
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3592
symbol: LFA_3592
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: LFA_3597
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: LFA_3600
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase (TS) (TSase); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: LFA_3601
symbol: lgt
gene_biotype: protein_coding
description:
  Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: LFA_3603
symbol: ptsP
gene_biotype: protein_coding
description:
  Fused PTS enzyme: PEP-protein phosphotransferase (enzyme I); Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: LFA_3604
symbol: nudH
gene_biotype: protein_coding
description:
  Nucleotide hydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.


ensembl_gene_id: LFA_3605
symbol: ansA
gene_biotype: protein_coding
description:
  Cytoplasmic L-asparaginase I; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_3607
symbol: glmU
gene_biotype: protein_coding
description:
  Fused N-acetyl glucosamine-1-phosphate uridyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: LFA_3611
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III DNA glycosylase/apyrimidinic (AP) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: LFA_3612
symbol: LFA_3612
gene_biotype: protein_coding
description:
  Conserved protein of unknown function; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: LFA_3613
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: LFA_3614
symbol: ubiX
gene_biotype: protein_coding
description:
  3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: LFA_3617
symbol: queC
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: LFA_3618
symbol: algA
gene_biotype: protein_coding
description:
  Alginate biosynthesis protein AlgA [Includes: Mannose-6-phosphate isomerase; Mannose-1-phosphate guanylyltransferase]; Belongs to the mannose-6-phosphate isomerase type 2 family.


ensembl_gene_id: LFA_3620
symbol: gidA
gene_biotype: protein_coding
description:
  Glucose-inhibited cell-division protein; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: LFA_3622
symbol: gidB
gene_biotype: protein_coding
description:
  Methyltransferase, SAM-dependent methyltransferase, glucose-inhibited cell-division protein; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.


ensembl_gene_id: LFA_3627
symbol: lldD
gene_biotype: protein_coding
description:
  L-lactate dehydrogenase, FMN-linked; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: LFA_3632
symbol: ctaD
gene_biotype: protein_coding
description:
  Cytochrome c oxidase subunit 1; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.


ensembl_gene_id: LFA_3633
symbol: coxB
gene_biotype: protein_coding
description:
  Cytochrome c oxidase subunit 2; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).


ensembl_gene_id: LFA_3640
symbol: ubiE
gene_biotype: protein_coding
description:
  Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: LFA_3643
symbol: ubiB
gene_biotype: protein_coding
description:
  2-octaprenylphenol hydroxylase; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis.


ensembl_gene_id: LFA_3644
symbol: tatA
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: LFA_3654
symbol: LFA_3654
gene_biotype: protein_coding
description:
  Estradiol 17-beta-dehydrogenase; Function of strongly homologous gene; enzyme; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: LFA_3656
symbol: LFA_3656
gene_biotype: protein_coding
description:
  Putative Hopanoid-associated phosphorylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_3664
symbol: LFA_3664
gene_biotype: protein_coding
description:
  Glutamine--scyllo-inositol transaminase; Function of strongly homologous gene; enzyme; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: LFA_3666
symbol: LFA_3666
gene_biotype: protein_coding
description:
  Putative enzyme involved in Lipopolysaccharide biosynthesis[WxcM domain protein]; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_3668
symbol: rmlC
gene_biotype: protein_coding
description:
  dTDP-4-deoxyrhamnose-3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: LFA_3669
symbol: rmlD
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.


ensembl_gene_id: LFA_3670
symbol: LFA_3670
gene_biotype: protein_coding
description:
  Putative Acyltransferase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_3671
symbol: rmlA
gene_biotype: protein_coding
description:
  dTDP-glucose pyrophosphorylase (glucose-1-phosphate thymidylyltransferase); Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: LFA_3672
symbol: rmlB
gene_biotype: protein_coding
description:
  dTDP-D-glucose-4,6-dehydratase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: LFA_3676
symbol: LFA_3676
gene_biotype: protein_coding
description:
  Putative N-acetylglucosaminyl phosphatidylinositol deacetylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_3685
symbol: msrAB
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: LFA_3695
symbol: apaH
gene_biotype: protein_coding
description:
  Diadenosine tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.


ensembl_gene_id: LFA_3696
symbol: LFA_3696
gene_biotype: protein_coding
description:
  Putative helicase/relaxase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_3697
symbol: ksgA
gene_biotype: protein_coding
description:
  S-adenosylmethionine-6-N',N'-adenosyl (rRNA) dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: LFA_3699
symbol: panD
gene_biotype: protein_coding
description:
  Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: LFA_3700
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: LFA_3701
symbol: LFA_3701
gene_biotype: protein_coding
description:
  Putative DNA-binding protein hemimethylated; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor.


ensembl_gene_id: LFA_3704
symbol: LFA_3704
gene_biotype: protein_coding
description:
  Putative C-terminal part of NAD(P)H-flavin reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3705
symbol: ubiD
gene_biotype: protein_coding
description:
  3-octaprenyl-4-hydroxybenzoate decarboxylase; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis.


ensembl_gene_id: LFA_3706
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: LFA_3708
symbol: trxA
gene_biotype: protein_coding
description:
  Thioredoxin 1; Function of homologous gene experimentally demonstrated in an other organism; carrier; Belongs to the thioredoxin family.


ensembl_gene_id: LFA_3709
symbol: rsmE
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase E (16S rRNA m3U1498 methyltransferase); Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: LFA_3710
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarate hydratase (fumarase C),aerobic Class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: LFA_3711
symbol: LFA_3711
gene_biotype: protein_coding
description:
  Putative dolichyl-phosphate mannosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3717
symbol: lpxB-2
gene_biotype: protein_coding
description:
  tetraacyldisaccharide-1-P synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: LFA_3718
symbol: lpxD-3
gene_biotype: protein_coding
description:
  UDP-3-O-acylglucosamine N-acyltransferase 2; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: LFA_3722
symbol: LFA_3722
gene_biotype: protein_coding
description:
  Putative glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_3723
symbol: cysK
gene_biotype: protein_coding
description:
  Putative cystathionine beta-synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3726
symbol: LFA_3726
gene_biotype: protein_coding
description:
  Putative methyltransferases; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: LFA_3727
symbol: ihfB
gene_biotype: protein_coding
description:
  Integration host factor (IHF), DNA-binding protein, beta subunit; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: LFA_3736
symbol: LFA_3736
gene_biotype: protein_coding
description:
  Putative Sodium-type flagellar protein motY precursor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; structure.


ensembl_gene_id: LFA_3738
symbol: rnt
gene_biotype: protein_coding
description:
  Ribonuclease T (RNase T); Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis.


ensembl_gene_id: LFA_3739
symbol: LFA_3739
gene_biotype: protein_coding
description:
  Putative peroxiredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3740
symbol: LFA_3740
gene_biotype: protein_coding
description:
  Putative glutaredoxin-like protein (grxD-like); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the glutaredoxin family. Monothiol subfamily.


ensembl_gene_id: LFA_3741
symbol: sodB
gene_biotype: protein_coding
description:
  Superoxide dismutase, Fe; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: LFA_3742
symbol: argD
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: LFA_3743
symbol: LFA_3743
gene_biotype: protein_coding
description:
  Putative dioxygenase of extradiol dioxygenase family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3745
symbol: LFA_3745
gene_biotype: protein_coding
description:
  SUA5/yciO/yrdC family:Sua5/YciO/YrdC/YwlC protein family; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: LFA_3746
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase proenzyme; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: LFA_3750
symbol: parC
gene_biotype: protein_coding
description:
  DNA topoisomerase IV, subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.


ensembl_gene_id: LFA_3751
symbol: budB
gene_biotype: protein_coding
description:
  Putative acetolactate synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the TPP enzyme family.


ensembl_gene_id: LFA_3752
symbol: LFA_3752
gene_biotype: protein_coding
description:
  Putative aldehyde dehydrogenase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: LFA_3762
symbol: atpC
gene_biotype: protein_coding
description:
  F1 sector of membrane-bound ATP synthase, epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: LFA_3763
symbol: atpD-2
gene_biotype: protein_coding
description:
  Membrane-bound ATP synthase, F1 sector, beta-subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: LFA_3764
symbol: atpG
gene_biotype: protein_coding
description:
  F1 sector of membrane-bound ATP synthase, gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: LFA_3765
symbol: atpA-2
gene_biotype: protein_coding
description:
  Membrane-bound ATP synthase, F1 sector, alpha-subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: LFA_3766
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: LFA_3767
symbol: atpF-2
gene_biotype: protein_coding
description:
  F0 sector of membrane-bound ATP synthase, subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: LFA_3768
symbol: atpE-2
gene_biotype: protein_coding
description:
  Membrane-bound ATP synthase, F0 sector, subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: LFA_3769
symbol: atpB-2
gene_biotype: protein_coding
description:
  F0 sector of membrane-bound ATP synthase, subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: LFA_3774
symbol: yraO
gene_biotype: protein_coding
description:
  DnaA initiator-associating factor for replication initiation; Function of homologous gene experimentally demonstrated in an other organism; factor.


ensembl_gene_id: LFA_3775
symbol: yraN
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Homologs of previously reported genes of unknown function; Belongs to the UPF0102 family.


ensembl_gene_id: LFA_3777
symbol: yraL
gene_biotype: protein_coding
description:
  Putative methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: LFA_3778
symbol: LFA_3778
gene_biotype: protein_coding
description:
  Protein of unknown function [6 coiled coil domains]; No homology to any previously reported sequences.


ensembl_gene_id: LFA_3787
symbol: trmE
gene_biotype: protein_coding
description:
  GTPase; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: LFA_3788
symbol: yidC
gene_biotype: protein_coding
description:
  Cytoplasmic insertase into membrane protein, Sec system; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: LFA_3789
symbol: LFA_3789
gene_biotype: protein_coding
description:
  Putative membrane protein insertion efficiency factor; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: LFA_3790
symbol: rnpA
gene_biotype: protein_coding
description:
  Protein C5 component of RNase P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: LFA_3791
symbol: rpmH
gene_biotype: protein_coding
description:
  50S ribosomal protein L34; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL34 family.


ensembl_gene_id: LFA_4002
symbol: LFA_4002
gene_biotype: protein_coding
description:
  Putative transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator.


ensembl_gene_id: LFA_4038
symbol: rpmJ
gene_biotype: protein_coding
description:
  50S ribosomal subunit protein L36; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL36 family.


