# geneInfo

ensembl_gene_id: AAV35_000005
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: AAV35_000015
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication/repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: AAV35_000025
symbol: AKG03322.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of  [...]


ensembl_gene_id: AAV35_000030
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiation protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: AAV35_000040
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: AAV35_000045
symbol: yidC
gene_biotype: protein_coding
description:
  OxaA precursor; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins; Belongs to the OXA1/ALB3/YidC family. Type 2 subfamily.


ensembl_gene_id: AAV35_000055
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA uridine-5-carboxymethylaminomethyl(34) synthesis GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: AAV35_000060
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: AAV35_000065
symbol: gidB
gene_biotype: protein_coding
description:
  16S rRNA (guanine(527)-N(7))-methyltransferase RsmG; Specifically methylates the N7 position of guanine in position 535 of 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: AAV35_000090
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: AAV35_000095
symbol: aroD
gene_biotype: protein_coding
description:
  Type I 3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family.


ensembl_gene_id: AAV35_000100
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase A; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: AAV35_000110
symbol: noc
gene_biotype: protein_coding
description:
  Nucleoid occlusion protein; Effects nucleoid occlusion by binding relatively nonspecifically to DNA and preventing the assembly of the division machinery in the vicinity of the nucleoid, especially under conditions that disturb the cell cycle. It helps to coordinate cell division and chromosome segregation by preventing the formation of the Z ring through the nucleoid, which would cause chromosome breakage. Belongs to the ParB family.


ensembl_gene_id: AAV35_000140
symbol: ychF
gene_biotype: protein_coding
description:
  Redox-regulated ATPase YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: AAV35_000150
symbol: AKG03346.1
gene_biotype: protein_coding
description:
  Single-stranded DNA-binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: AAV35_000155
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: AAV35_000175
symbol: AKG03351.1
gene_biotype: protein_coding
description:
  Phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: AAV35_000190
symbol: AKG03354.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.


ensembl_gene_id: AAV35_000200
symbol: AKG03356.1
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: AAV35_000205
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: AAV35_000275
symbol: rlmH
gene_biotype: protein_coding
description:
  23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: AAV35_000745
symbol: rihB
gene_biotype: protein_coding
description:
  Ribonucleoside hydrolase; Hydrolyzes cytidine or uridine to ribose and cytosine or uracil, respectively.


ensembl_gene_id: AAV35_000750
symbol: rbsK
gene_biotype: protein_coding
description:
  Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.


ensembl_gene_id: AAV35_000755
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: AAV35_000765
symbol: AKG03454.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter permease subunit PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: AAV35_000775
symbol: cbiA
gene_biotype: protein_coding
description:
  Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: AAV35_000800
symbol: fbp
gene_biotype: protein_coding
description:
  Fructose-1,6-bisphosphatase; Class 3; catalyzes the formation of fructose 6-phosphate from fructose-1,6-bisphosphate.


ensembl_gene_id: AAV35_000845
symbol: mqo
gene_biotype: protein_coding
description:
  Malate:quinone oxidoreductase; Malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate.


ensembl_gene_id: AAV35_001010
symbol: ilvA
gene_biotype: protein_coding
description:
  Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: AAV35_001030
symbol: AKG03504.1
gene_biotype: protein_coding
description:
  Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: AAV35_001065
symbol: pepT
gene_biotype: protein_coding
description:
  Peptidase T; Cleaves the N-terminal amino acid of tripeptides. Belongs to the peptidase M20B family.


ensembl_gene_id: AAV35_001070
symbol: bioD
gene_biotype: protein_coding
description:
  Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: AAV35_001210
symbol: murQ
gene_biotype: protein_coding
description:
  N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.


ensembl_gene_id: AAV35_001250
symbol: serC
gene_biotype: protein_coding
description:
  Phosphoserine transaminase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.


ensembl_gene_id: AAV35_001255
symbol: AKG03543.2
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: AAV35_001290
symbol: AKG03550.1
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: AAV35_001295
symbol: AKG03551.1
gene_biotype: protein_coding
description:
  Dicarboxylate/amino acid:cation symporter; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: AAV35_001355
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.


ensembl_gene_id: AAV35_001395
symbol: nadE
gene_biotype: protein_coding
description:
  NAD(+) synthase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses ammonia as a nitrogen source; Belongs to the NAD synthetase family.


ensembl_gene_id: AAV35_001525
symbol: msrA
gene_biotype: protein_coding
description:
  Methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: AAV35_001560
symbol: AKG03598.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: AAV35_001595
symbol: AKG03604.1
gene_biotype: protein_coding
description:
  Catalyzes the oxidation of acetaldehyde, benzaldehyde, propionaldehyde and other aldehydes; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: AAV35_001750
symbol: metXA
gene_biotype: protein_coding
description:
  Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.


ensembl_gene_id: AAV35_001830
symbol: AKG03648.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.


ensembl_gene_id: AAV35_001840
symbol: AKG03650.1
gene_biotype: protein_coding
description:
  Cardiolipin synthase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.


ensembl_gene_id: AAV35_001900
symbol: AKG03661.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport system II carrier protein; Component of the transport system for branched-chain amino acids.


ensembl_gene_id: AAV35_001905
symbol: AKG05660.1
gene_biotype: protein_coding
description:
  Sodium:proton exchanger; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: AAV35_001945
symbol: AKG03669.1
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-mannosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: AAV35_001950
symbol: AKG05661.1
gene_biotype: protein_coding
description:
  Glycosyltransferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.


ensembl_gene_id: AAV35_001960
symbol: AKG03671.1
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibD; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: AAV35_001970
symbol: ribBA
gene_biotype: protein_coding
description:
  Bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: AAV35_001975
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family.


ensembl_gene_id: AAV35_002005
symbol: nagB
gene_biotype: protein_coding
description:
  Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.


ensembl_gene_id: AAV35_002095
symbol: lipL
gene_biotype: protein_coding
description:
  Octanoyltransferase; Catalyzes the amidotransfer (transamidation) of the octanoyl moiety from octanoyl-GcvH to the lipoyl domain of the E2 subunit of lipoate-dependent enzymes; Belongs to the octanoyltransferase LipL family.


ensembl_gene_id: AAV35_002145
symbol: AKG03706.1
gene_biotype: protein_coding
description:
  acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: AAV35_002175
symbol: icmF
gene_biotype: protein_coding
description:
  methylmalonyl-CoA mutase; Catalyzes the reversible interconversion of isobutyryl-CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly.


ensembl_gene_id: AAV35_002185
symbol: rpoE
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit delta; Participates in both the initiation and recycling phases of transcription. In the presence of the delta subunit, RNAP displays an increased specificity of transcription, a decreased affinity for nucleic acids, and an increased efficiency of RNA synthesis because of enhanced recycling; Belongs to the RpoE family.


ensembl_gene_id: AAV35_002190
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: AAV35_002195
symbol: tal
gene_biotype: protein_coding
description:
  Fructose-6-phosphate aldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: AAV35_002200
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: AAV35_002205
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: AAV35_002220
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: AAV35_002230
symbol: AKG03721.1
gene_biotype: protein_coding
description:
  threonylcarbamoyl-AMP synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: AAV35_002235
symbol: AKG05665.1
gene_biotype: protein_coding
description:
  Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: AAV35_002245
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: AAV35_002250
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: AAV35_002270
symbol: atpB
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: AAV35_002275
symbol: atpE
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: AAV35_002280
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase F0 subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: AAV35_002285
symbol: atpH
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: AAV35_002290
symbol: atpA
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: AAV35_002295
symbol: atpG
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: AAV35_002300
symbol: atpD
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: AAV35_002305
symbol: atpC
gene_biotype: protein_coding
description:
  F0F1 ATP synthase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: AAV35_002340
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: AAV35_002365
symbol: AKG03745.1
gene_biotype: protein_coding
description:
  Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: AAV35_002650
symbol: cysQ
gene_biotype: protein_coding
description:
  3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.


ensembl_gene_id: AAV35_002730
symbol: nanE
gene_biotype: protein_coding
description:
  N-acetylmannosamine-6-phosphate 2-epimerase; Converts N-acetylmannosamine-6-phosphate (ManNAc-6-P) to N- acetylglucosamine-6-phosphate (GlcNAc-6-P).


ensembl_gene_id: AAV35_002735
symbol: nanA
gene_biotype: protein_coding
description:
  N-acetylneuraminate lyase; Catalyzes the reversible aldol cleavage of N-acetylneuraminic acid (sialic acid; Neu5Ac) to form pyruvate and N-acetylmannosamine (ManNAc) via a Schiff base intermediate.


ensembl_gene_id: AAV35_002780
symbol: AKG03813.1
gene_biotype: protein_coding
description:
  Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.


ensembl_gene_id: AAV35_002865
symbol: AKG03827.1
gene_biotype: protein_coding
description:
  Aspartate aminotransferase family protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: AAV35_002895
symbol: xpt
gene_biotype: protein_coding
description:
  Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.


ensembl_gene_id: AAV35_002900
symbol: guaC
gene_biotype: protein_coding
description:
  GMP reductase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides; Belongs to the IMPDH/GMPR family. GuaC type 2 subfamily.


ensembl_gene_id: AAV35_002920
symbol: hmp
gene_biotype: protein_coding
description:
  Nitric oxide dioxygenase; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily.


ensembl_gene_id: AAV35_002955
symbol: APC65570.1
gene_biotype: protein_coding
description:
  PTS mannitol transporter subunit IIBC; CmtA with CmtB possibly forms the mannitol-like permease component of the cryptic mannitol phosphotransferase system, which phosphorylates and transports various carbohydrates and polyhydric alcohols in Escherichia coli; cytoplasmic protein.


ensembl_gene_id: AAV35_002980
symbol: gvpA
gene_biotype: protein_coding
description:
  Gas vesicle protein GvpA; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure.


ensembl_gene_id: AAV35_003020
symbol: AKG03855.1
gene_biotype: protein_coding
description:
  Gas vesicle protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth.


ensembl_gene_id: AAV35_003050
symbol: AKG03861.1
gene_biotype: protein_coding
description:
  Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.


ensembl_gene_id: AAV35_003125
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: AAV35_003130
symbol: AKG03875.1
gene_biotype: protein_coding
description:
  Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.


ensembl_gene_id: AAV35_003190
symbol: AKG03887.1
gene_biotype: protein_coding
description:
  Histidine kinase; Member of the two-component regulatory system DegS/DegU, which plays an important role in the transition growth phase.


ensembl_gene_id: AAV35_003245
symbol: fliW
gene_biotype: protein_coding
description:
  Flagellar assembly protein FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.


ensembl_gene_id: AAV35_003250
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: AAV35_003255
symbol: AKG03897.1
gene_biotype: protein_coding
description:
  Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: AAV35_003260
symbol: AKG03898.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: AAV35_003280
symbol: hpf
gene_biotype: protein_coding
description:
  Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: AAV35_003285
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: AAV35_003290
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: AAV35_003305
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: AAV35_003310
symbol: AKG03906.1
gene_biotype: protein_coding
description:
  Cell division protein FtsX; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: AAV35_003340
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: AAV35_003345
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: AAV35_003350
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: AAV35_003375
symbol: hprK
gene_biotype: protein_coding
description:
  HPr kinase/phosphorylase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon [...]


ensembl_gene_id: AAV35_003380
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: AAV35_003395
symbol: AKG03923.1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate responsive antiterminator GlpP; Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA.


ensembl_gene_id: AAV35_003400
symbol: AKG03924.1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: AAV35_003410
symbol: hisZ
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: AAV35_003415
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: AAV35_003420
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: AAV35_003430
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: AAV35_003435
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase.


ensembl_gene_id: AAV35_003440
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: AAV35_003445
symbol: hisI
gene_biotype: protein_coding
description:
  Bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase; In the N-terminal section; belongs to the PRA-CH family.


ensembl_gene_id: AAV35_003465
symbol: ANC70213.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.


ensembl_gene_id: AAV35_003480
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp endopeptidase, proteolytic subunit ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: AAV35_003505
symbol: AKG03944.1
gene_biotype: protein_coding
description:
  Type I glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: AAV35_003515
symbol: tpiA
gene_biotype: protein_coding
description:
  Triose-phosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: AAV35_003520
symbol: gpmI
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase (2,3-diphosphoglycerate-independent); Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the BPG-independent phosphoglycerate mutase family.


ensembl_gene_id: AAV35_003525
symbol: eno
gene_biotype: protein_coding
description:
  Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: AAV35_003535
symbol: AKG03950.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate--protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: AAV35_003560
symbol: secG
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: AAV35_003570
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: AAV35_003580
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: AAV35_003645
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage system protein H; Is also involved in protein lipoylation via its role as an octanoyl/lipoyl carrier protein intermediate; Belongs to the GcvH family.


ensembl_gene_id: AAV35_003665
symbol: metN
gene_biotype: protein_coding
description:
  Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: AAV35_003695
symbol: AKG03980.1
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.


ensembl_gene_id: AAV35_003755
symbol: AAV35_003755
gene_biotype: protein_coding
description:
  Transposase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate.


ensembl_gene_id: AAV35_003765
symbol: AKG03991.1
gene_biotype: protein_coding
description:
  Citrate synthase 3; Forms citrate from oxaloacetate and acetyl-CoA; functions in TCA cycle, glyoxylate cycle and respiration; Belongs to the citrate synthase family.


ensembl_gene_id: AAV35_003940
symbol: rpsN-2
gene_biotype: protein_coding
description:
  30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: AAV35_004045
symbol: menA
gene_biotype: protein_coding
description:
  1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.


ensembl_gene_id: AAV35_004055
symbol: menD
gene_biotype: protein_coding
description:
  2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylic-acid synthase; Catalyzes the thiamine diphosphate-dependent decarboxylation of 2-oxoglutarate and the subsequent addition of the resulting succinic semialdehyde-thiamine pyrophosphate anion to isochorismate to yield 2- succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Belongs to the TPP enzyme family. MenD subfamily.


ensembl_gene_id: AAV35_004060
symbol: menH
gene_biotype: protein_coding
description:
  2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase; Catalyzes a proton abstraction reaction that results in 2,5- elimination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate (SEPHCHC) and the formation of 2-succinyl-6- hydroxy-2,4-cyclohexadiene-1-carboxylate (SHCHC).


ensembl_gene_id: AAV35_004065
symbol: menB
gene_biotype: protein_coding
description:
  1,4-dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA).


ensembl_gene_id: AAV35_004070
symbol: menE
gene_biotype: protein_coding
description:
  o-succinylbenzoate--CoA ligase; Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl-CoA (OSB-CoA); Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily.


ensembl_gene_id: AAV35_004075
symbol: menC
gene_biotype: protein_coding
description:
  O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).


ensembl_gene_id: AAV35_004090
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.


ensembl_gene_id: AAV35_004100
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: AAV35_004185
symbol: AKG04063.1
gene_biotype: protein_coding
description:
  2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: AAV35_004200
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanosine(46)-N7)-methyltransferase TrmB; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: AAV35_004220
symbol: yjjX
gene_biotype: protein_coding
description:
  Inosine/xanthosine triphosphatase; Pyrophosphatase; has activity against dUTP and dITP; the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226; in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms; in Escherichia coli overexpression of this gene leads to resistance to an HMP analog.


ensembl_gene_id: AAV35_004245
symbol: AKG04074.1
gene_biotype: protein_coding
description:
  tRNA-binding protein; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: AAV35_004255
symbol: AKG04076.1
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the formation of 5-phospho-alpha-D-ribose 1-diphosphate and nicotinate from nicotinate D-ribonucleotide and diphosphate; Belongs to the NAPRTase family.


ensembl_gene_id: AAV35_004280
symbol: AKG04081.1
gene_biotype: protein_coding
description:
  Chorismate mutase; Catalyzes the formation of 3-deoxy-D-aribino-hept-2-ulosonate 7-phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate and the formation of prephenate from chorismate.


ensembl_gene_id: AAV35_004290
symbol: AKG04083.1
gene_biotype: protein_coding
description:
  Motility protein A; Homolog of MotA, appears to be involved in motility on surfaces and under different ionic conditions. With MotS (a MotB homolog) forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine.


ensembl_gene_id: AAV35_004320
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: AAV35_004530
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: AAV35_004545
symbol: AKG04121.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of L-histidinol from L-histidinol phosphate; Belongs to the PHP hydrolase family. HisK subfamily.


ensembl_gene_id: AAV35_004560
symbol: thiI
gene_biotype: protein_coding
description:
  tRNA 4-thiouridine(8) synthase ThiI; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.


ensembl_gene_id: AAV35_004570
symbol: nadK
gene_biotype: protein_coding
description:
  NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: AAV35_004580
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: AAV35_004610
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: AAV35_004650
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: AAV35_004655
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase carboxyltransferase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: AAV35_004660
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: AAV35_004680
symbol: AKG04146.1
gene_biotype: protein_coding
description:
  Citrate synthase; Catalyzes the formation of citrate from acetyl-CoA and oxaloacetate; Belongs to the citrate synthase family.


ensembl_gene_id: AAV35_004690
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.


ensembl_gene_id: AAV35_004710
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.


ensembl_gene_id: AAV35_004715
symbol: mutM
gene_biotype: protein_coding
description:
  DNA-formamidopyrimidine glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: AAV35_004720
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: AAV35_004725
symbol: AKG04155.1
gene_biotype: protein_coding
description:
  Type I glyceraldehyde-3-phosphate dehydrogenase; NAD-dependent; catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; active during glycolysis; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: AAV35_004730
symbol: speH
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.


ensembl_gene_id: AAV35_004740
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional regulator NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: AAV35_004755
symbol: thrS
gene_biotype: protein_coding
description:
  threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: AAV35_004760
symbol: AKG05703.1
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: AAV35_004770
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: AAV35_004790
symbol: AKG04165.1
gene_biotype: protein_coding
description:
  RNA methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: AAV35_004795
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanine--tRNA ligase subunit alpha; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: AAV35_004800
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanine--tRNA ligase subunit beta; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: AAV35_004810
symbol: ANC70216.1
gene_biotype: protein_coding
description:
  Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: AAV35_004825
symbol: mutS2
gene_biotype: protein_coding
description:
  Endonuclease MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: AAV35_004865
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: AAV35_004910
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: AAV35_004915
symbol: AKG04186.1
gene_biotype: protein_coding
description:
  Non-canonical purine NTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: AAV35_004975
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: AAV35_004980
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: AAV35_004985
symbol: lon
gene_biotype: protein_coding
description:
  Endopeptidase La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: AAV35_004990
symbol: engB
gene_biotype: protein_coding
description:
  YihA family ribosome biogenesis GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: AAV35_005005
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: AAV35_005015
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: AAV35_005020
symbol: hemD
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: AAV35_005035
symbol: valS
gene_biotype: protein_coding
description:
  valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: AAV35_005040
symbol: AKG04208.1
gene_biotype: protein_coding
description:
  Bifunctional folylpolyglutamate synthase/dihydrofolate synthase; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: AAV35_005070
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: AAV35_005085
symbol: obgE
gene_biotype: protein_coding
description:
  GTPase ObgE; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: AAV35_005105
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: AAV35_005110
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: AAV35_005120
symbol: queA
gene_biotype: protein_coding
description:
  tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: AAV35_005125
symbol: tgt
gene_biotype: protein_coding
description:
  tRNA guanosine(34) transglycosylase Tgt; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose t [...]


ensembl_gene_id: AAV35_005135
symbol: secD
gene_biotype: protein_coding
description:
  Protein translocase subunit SecDF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.


ensembl_gene_id: AAV35_005150
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: AAV35_005155
symbol: AKG04230.1
gene_biotype: protein_coding
description:
  (p)ppGpp synthetase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: AAV35_005160
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: AAV35_005170
symbol: aspS
gene_biotype: protein_coding
description:
  aspartate--tRNA ligase; Catalyzes the attachment of L-aspartate to tRNA(Asp) in a two-step reaction: L-aspartate is first activated by ATP to form Asp- AMP and then transferred to the acceptor end of tRNA(Asp). Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: AAV35_005195
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA 2-thiouridine(34) synthase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: AAV35_005205
symbol: recD2
gene_biotype: protein_coding
description:
  Hypothetical protein; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.


ensembl_gene_id: AAV35_005210
symbol: alaS
gene_biotype: protein_coding
description:
  alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: AAV35_005220
symbol: AKG04243.1
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase RuvA; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: AAV35_005230
symbol: mltG
gene_biotype: protein_coding
description:
  Hypothetical protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family.


ensembl_gene_id: AAV35_005245
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: AAV35_005255
symbol: mtnN
gene_biotype: protein_coding
description:
  5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.


ensembl_gene_id: AAV35_005300
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: AAV35_005310
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate (nicotinamide) nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: AAV35_005320
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosome silencing factor; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: AAV35_005360
symbol: lepA
gene_biotype: protein_coding
description:
  Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: AAV35_005365
symbol: AKG04270.1
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: AAV35_005370
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcriptional repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: AAV35_005375
symbol: grpE
gene_biotype: protein_coding
description:
  Nucleotide exchange factor GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds [...]


ensembl_gene_id: AAV35_005385
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: AAV35_005390
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: AAV35_005395
symbol: AKG04276.1
gene_biotype: protein_coding
description:
  16S rRNA (uracil(1498)-N(3))-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: AAV35_005400
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: AAV35_005435
symbol: ybeY
gene_biotype: protein_coding
description:
  rRNA maturation RNase YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: AAV35_005445
symbol: era
gene_biotype: protein_coding
description:
  GTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: AAV35_005470
symbol: AKG04290.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate synthase regulatory protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: AAV35_005480
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: AAV35_005485
symbol: sigA
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: AAV35_005505
symbol: AKG04296.1
gene_biotype: protein_coding
description:
  Nif3-like dinuclear metal center hexameric protein; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.


ensembl_gene_id: AAV35_005510
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: AAV35_005520
symbol: nfo
gene_biotype: protein_coding
description:
  Deoxyribonuclease IV; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin.


ensembl_gene_id: AAV35_005525
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: AAV35_005565
symbol: AKG04302.1
gene_biotype: protein_coding
description:
  Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: AAV35_005575
symbol: ldh
gene_biotype: protein_coding
description:
  L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.


ensembl_gene_id: AAV35_005655
symbol: gcvT
gene_biotype: protein_coding
description:
  Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine.


ensembl_gene_id: AAV35_005660
symbol: gcvPA
gene_biotype: protein_coding
description:
  Glycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein.


ensembl_gene_id: AAV35_005665
symbol: gcvPB
gene_biotype: protein_coding
description:
  Glycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. C-terminal subunit subfamily.


ensembl_gene_id: AAV35_005675
symbol: AKG04323.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: AAV35_005680
symbol: mntR
gene_biotype: protein_coding
description:
  Manganese transport transcriptional regulator; Central regulator of manganese homeostasis. Belongs to the DtxR/MntR family.


ensembl_gene_id: AAV35_005695
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: AAV35_005700
symbol: AKG04328.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: AAV35_005705
symbol: AKG04329.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: AAV35_005715
symbol: nusB
gene_biotype: protein_coding
description:
  Transcription antitermination factor NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: AAV35_005720
symbol: folD
gene_biotype: protein_coding
description:
  Bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: AAV35_005725
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: AAV35_005730
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: AAV35_005745
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: AAV35_005775
symbol: AKG04342.1
gene_biotype: protein_coding
description:
  Aspartate kinase; Catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; lysine and threonine sensitive; Belongs to the aspartokinase family.


ensembl_gene_id: AAV35_005865
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: AAV35_005875
symbol: rnz
gene_biotype: protein_coding
description:
  Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.


ensembl_gene_id: AAV35_005920
symbol: xerD
gene_biotype: protein_coding
description:
  Site-specific tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: AAV35_005925
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: AAV35_005930
symbol: AKG04370.1
gene_biotype: protein_coding
description:
  Purine-nucleoside phosphorylase; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: AAV35_005935
symbol: deoA
gene_biotype: protein_coding
description:
  Pyrimidine-nucleoside phosphorylase; Catalyzes the reversible phosphorolysis of thymidine, deoxyuridine and their analogues to their respective bases and 2-deoxyribose 1-phosphate.


ensembl_gene_id: AAV35_005940
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: AAV35_005945
symbol: AKG04373.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: AAV35_005960
symbol: scpA
gene_biotype: protein_coding
description:
  Segregation/condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: AAV35_005965
symbol: scpB
gene_biotype: protein_coding
description:
  SMC-Scp complex subunit ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: AAV35_005975
symbol: AKG04379.1
gene_biotype: protein_coding
description:
  Thiol-disulfide oxidoreductase; Catalyzes the reduction of the disulfide bonds in the heme binding site of apocytochrome c.


ensembl_gene_id: AAV35_006055
symbol: AKG04394.1
gene_biotype: protein_coding
description:
  Protease PrsW; Involved in the degradation of specific anti-sigma factors. Belongs to the protease PrsW family.


ensembl_gene_id: AAV35_006080
symbol: fni
gene_biotype: protein_coding
description:
  Type 2 isopentenyl-diphosphate Delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).


ensembl_gene_id: AAV35_006085
symbol: der
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: AAV35_006090
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: AAV35_006105
symbol: AKG04404.1
gene_biotype: protein_coding
description:
  DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: AAV35_006110
symbol: mtrB
gene_biotype: protein_coding
description:
  Transcription attenuation protein MtrB; Required for transcription attenuation control in the Trp operon. This trans-acting factor seems to recognize a 10 bases nucleotide sequence in the Trp leader transcript causing transcription termination. Binds the leader RNA only in presence of L-tryptophan. Belongs to the MtrB family.


ensembl_gene_id: AAV35_006120
symbol: menG
gene_biotype: protein_coding
description:
  Bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).


ensembl_gene_id: AAV35_006130
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside-diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: AAV35_006135
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: AAV35_006140
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: AAV35_006145
symbol: AKG04411.1
gene_biotype: protein_coding
description:
  Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.


ensembl_gene_id: AAV35_006150
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate transaminase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: AAV35_006160
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: AAV35_006210
symbol: dapB
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: AAV35_006230
symbol: birA
gene_biotype: protein_coding
description:
  biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: AAV35_006260
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: AAV35_006270
symbol: recU
gene_biotype: protein_coding
description:
  Holliday junction resolvase RecU; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family.


ensembl_gene_id: AAV35_006280
symbol: AKG04432.1
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: AAV35_006290
symbol: AKG04433.1
gene_biotype: protein_coding
description:
  Cell division protein DivIVA; Divisome component that associates with the complex late in its assembly, after the Z-ring is formed, and is dependent on DivIC and PBP2B for its recruitment to the divisome. Together with EzrA, is a key component of the system that regulates PBP1 localization during cell cycle progression. Its main role could be the removal of PBP1 from the cell pole after pole maturation is completed. Also contributes to the recruitment of PBP1 to the division complex. Not essential for septum formation.


ensembl_gene_id: AAV35_006305
symbol: AKG04435.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: AAV35_006320
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: AAV35_006325
symbol: AKG04439.1
gene_biotype: protein_coding
description:
  Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: AAV35_006330
symbol: tatA
gene_biotype: protein_coding
description:
  Sec-independent protein translocase TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: AAV35_006335
symbol: tatC
gene_biotype: protein_coding
description:
  Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.


ensembl_gene_id: AAV35_006345
symbol: sbcD
gene_biotype: protein_coding
description:
  Exonuclease sbcCD subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: AAV35_006360
symbol: ung
gene_biotype: protein_coding
description:
  uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: AAV35_006590
symbol: parC
gene_biotype: protein_coding
description:
  DNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 2 subfamily.


ensembl_gene_id: AAV35_006595
symbol: parE
gene_biotype: protein_coding
description:
  DNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 2 subfamily.


ensembl_gene_id: AAV35_006615
symbol: plsY
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: AAV35_006625
symbol: AKG05727.1
gene_biotype: protein_coding
description:
  Membrane protein insertion efficiency factor YidD; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: AAV35_006670
symbol: AKG04500.1
gene_biotype: protein_coding
description:
  Subunit B of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in the case of S. meliloti it was proved to be involved specifically with K+ transport.


ensembl_gene_id: AAV35_006690
symbol: AKG04504.1
gene_biotype: protein_coding
description:
  Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.


ensembl_gene_id: AAV35_006705
symbol: lexA
gene_biotype: protein_coding
description:
  Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: AAV35_006725
symbol: hflX
gene_biotype: protein_coding
description:
  GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: AAV35_006730
symbol: hfq
gene_biotype: protein_coding
description:
  RNA chaperone Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: AAV35_006735
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: AAV35_006745
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: AAV35_006750
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: AAV35_006760
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: AAV35_006775
symbol: recA
gene_biotype: protein_coding
description:
  Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: AAV35_006785
symbol: AKG04523.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: AAV35_006815
symbol: AKG04529.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: AAV35_006820
symbol: AKG04530.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: AAV35_006845
symbol: dapA
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: AAV35_006850
symbol: AKG04536.1
gene_biotype: protein_coding
description:
  Aspartate kinase; Catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; diaminopimelate sensitive; Belongs to the aspartokinase family.


ensembl_gene_id: AAV35_006855
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: AAV35_006860
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: AAV35_006865
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: AAV35_006875
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine(55) synthase TruB; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: AAV35_006880
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: AAV35_006890
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: AAV35_006905
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription termination/antitermination protein NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: AAV35_006910
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: AAV35_006915
symbol: polC
gene_biotype: protein_coding
description:
  PolC-type DNA polymerase III; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: AAV35_006920
symbol: proS
gene_biotype: protein_coding
description:
  proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacy [...]


ensembl_gene_id: AAV35_006930
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: AAV35_006940
symbol: AKG04551.1
gene_biotype: protein_coding
description:
  Isoprenyl transferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: AAV35_006945
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: AAV35_006955
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: AAV35_006970
symbol: AKG04557.1
gene_biotype: protein_coding
description:
  RNA polymerase subunit sigma; Expressed in late exponential phase; controls the expression of genes coding cell surface proteins involved in chemotaxis, flagellar assembly, and autolysis; Belongs to the sigma-70 factor family.


ensembl_gene_id: AAV35_006985
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: AAV35_006990
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: AAV35_006995
symbol: fliR
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: AAV35_007000
symbol: fliQ
gene_biotype: protein_coding
description:
  EscS/YscS/HrcS family type III secretion system export apparatus protein; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: AAV35_007005
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: AAV35_007030
symbol: fliL
gene_biotype: protein_coding
description:
  Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: AAV35_007085
symbol: fliF
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: AAV35_007100
symbol: flgB
gene_biotype: protein_coding
description:
  Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: AAV35_007105
symbol: codY
gene_biotype: protein_coding
description:
  Transcriptional repressor CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family.


ensembl_gene_id: AAV35_007110
symbol: hslU
gene_biotype: protein_coding
description:
  HslU--HslV peptidase ATPase subunit; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: AAV35_007115
symbol: hslV
gene_biotype: protein_coding
description:
  HslU--HslV peptidase proteolytic subunit; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: AAV35_007120
symbol: xerC
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: AAV35_007125
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: AAV35_007135
symbol: sucD
gene_biotype: protein_coding
description:
  succinate--CoA ligase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: AAV35_007140
symbol: sucC
gene_biotype: protein_coding
description:
  succinate--CoA ligase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: AAV35_007160
symbol: AKG04593.1
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase YlqF; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: AAV35_007170
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: AAV35_007175
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanosine(37)-N1)-methyltransferase TrmD; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: AAV35_007180
symbol: rimM
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: AAV35_007200
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: AAV35_007205
symbol: AKG04601.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.


ensembl_gene_id: AAV35_007210
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle-docking protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: AAV35_007215
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: AAV35_007225
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: AAV35_007235
symbol: AKG04607.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: AAV35_007245
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: AAV35_007250
symbol: fapR
gene_biotype: protein_coding
description:
  Fatty acid biosynthesis transcriptional regulator; Transcriptional factor involved in regulation of membrane lipid biosynthesis by repressing genes involved in fatty acid and phospholipid metabolism.


ensembl_gene_id: AAV35_007255
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: AAV35_007310
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome small subunit-dependent GTPase A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: AAV35_007325
symbol: AKG05732.1
gene_biotype: protein_coding
description:
  16S rRNA (cytosine(967)-C(5))-methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: AAV35_007330
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: AAV35_007335
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: AAV35_007340
symbol: AKG04627.1
gene_biotype: protein_coding
description:
  Bifunctional 4'-phosphopantothenoylcysteine decarboxylase/phosphopantothenoylcysteine synthetase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: AAV35_007345
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: AAV35_007365
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: AAV35_007370
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: AAV35_007375
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase B catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate.


ensembl_gene_id: AAV35_007380
symbol: pyrK
gene_biotype: protein_coding
description:
  Hypothetical protein; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).


ensembl_gene_id: AAV35_007395
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: AAV35_007400
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: AAV35_007410
symbol: pyrR
gene_biotype: protein_coding
description:
  Bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.


ensembl_gene_id: AAV35_007415
symbol: AKG04641.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: AAV35_007420
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: AAV35_007435
symbol: sepF
gene_biotype: protein_coding
description:
  Cell division protein SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: AAV35_007440
symbol: AKG05734.1
gene_biotype: protein_coding
description:
  YggS family pyridoxal phosphate enzyme; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: AAV35_007450
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: AAV35_007455
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: AAV35_007460
symbol: divIB
gene_biotype: protein_coding
description:
  Hypothetical protein; Cell division protein that may be involved in stabilizing or promoting the assembly of the division complex; Belongs to the FtsQ/DivIB family. DivIB subfamily.


ensembl_gene_id: AAV35_007465
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: AAV35_007470
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: AAV35_007475
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: AAV35_007480
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: AAV35_007495
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA (cytosine(1402)-N(4))-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: AAV35_007505
symbol: bshC
gene_biotype: protein_coding
description:
  Bacillithiol biosynthesis cysteine-adding enzyme BshC; Involved in bacillithiol (BSH) biosynthesis. May catalyze the last step of the pathway, the addition of cysteine to glucosamine malate (GlcN-Mal) to generate BSH.


ensembl_gene_id: AAV35_007535
symbol: tmcAL
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.


ensembl_gene_id: AAV35_007545
symbol: coaD
gene_biotype: protein_coding
description:
  Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: AAV35_007600
symbol: AKG04676.1
gene_biotype: protein_coding
description:
  Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.


ensembl_gene_id: AAV35_007605
symbol: AKG04677.1
gene_biotype: protein_coding
description:
  Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).


ensembl_gene_id: AAV35_007610
symbol: ctaB
gene_biotype: protein_coding
description:
  Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group; Belongs to the UbiA prenyltransferase family. Protoheme IX farnesyltransferase subfamily.


ensembl_gene_id: AAV35_007615
symbol: AKG04678.1
gene_biotype: protein_coding
description:
  Pyruvate carboxylase; Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second.


ensembl_gene_id: AAV35_007700
symbol: pdhA
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).


ensembl_gene_id: AAV35_007710
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: AAV35_007725
symbol: rnj
gene_biotype: protein_coding
description:
  Ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay; Belongs to the metallo-beta-lactamase superfamily. RNA- metabolizing metallo-beta-lactamase-like family. Bacterial RNase J subfamily.


ensembl_gene_id: AAV35_007760
symbol: AKG04706.1
gene_biotype: protein_coding
description:
  N-acetyldiaminopimelate deacetylase; Catalyzes the conversion of N-acetyl-diaminopimelate to diaminopimelate and acetate.


ensembl_gene_id: AAV35_007765
symbol: dapH
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase; Catalyzes the transfer of an acetyl group from acetyl-CoA to tetrahydrodipicolinate.


ensembl_gene_id: AAV35_007795
symbol: AKG04712.1
gene_biotype: protein_coding
description:
  Catalyzes the transamination of the aromatic amino acid forming a ketoacid; first step in aromatic amino acid degradation in lactococci.


ensembl_gene_id: AAV35_007885
symbol: eutB
gene_biotype: protein_coding
description:
  Hydroxyectoine utilization dehydratase EutB; Catalyzes the formation of 2-oxobutanoate from L-threonine; involved in ectoine utilization.


ensembl_gene_id: AAV35_007895
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium and cobalt transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: AAV35_007950
symbol: glcB
gene_biotype: protein_coding
description:
  Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.


ensembl_gene_id: AAV35_007965
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: AAV35_007970
symbol: AKG04744.1
gene_biotype: protein_coding
description:
  Fe3+-hydroxamate ABC transporter permease FhuB; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: AAV35_007980
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: AAV35_007985
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: AAV35_007990
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: AAV35_007995
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: AAV35_008000
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: AAV35_008015
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched-chain-amino-acid transaminase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: AAV35_008025
symbol: ectA
gene_biotype: protein_coding
description:
  Diaminobutyrate acetyltransferase; Catalyzes the acetylation of L-2,4-diaminobutyrate (DABA) to gamma-N-acetyl-alpha,gamma-diaminobutyric acid (ADABA) with acetyl coenzyme A.


ensembl_gene_id: AAV35_008030
symbol: AKG04756.1
gene_biotype: protein_coding
description:
  Diaminobutyrate--2-oxoglutarate transaminase; Catalyzes reversively the conversion of L-aspartate beta- semialdehyde (ASA) to L-2,4-diaminobutyrate (DABA) by transamination with L-glutamate; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: AAV35_008035
symbol: ectC
gene_biotype: protein_coding
description:
  L-ectoine synthase; Catalyzes the circularization of gamma-N-acetyl-alpha,gamma- diaminobutyric acid (ADABA) to ectoine (1,4,5,6-tetrahydro-2-methyl-4- pyrimidine carboxylic acid), which is an excellent osmoprotectant.


ensembl_gene_id: AAV35_008075
symbol: AKG05744.1
gene_biotype: protein_coding
description:
  Phosphogluconate dehydrogenase (NADP(+)-dependent, decarboxylating); Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.


ensembl_gene_id: AAV35_008280
symbol: crcB
gene_biotype: protein_coding
description:
  Hypothetical protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: AAV35_008290
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: AAV35_008335
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated endonuclease Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: AAV35_008340
symbol: cas1
gene_biotype: protein_coding
description:
  Subtype I-C CRISPR-associated endonuclease Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: AAV35_008345
symbol: AKG05748.1
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas4; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.


ensembl_gene_id: AAV35_008390
symbol: AKG04816.1
gene_biotype: protein_coding
description:
  Nitric oxide synthase; Catalyzes the production of nitric oxide. Belongs to the NOS family. Bacterial NOS oxygenase subfamily.


ensembl_gene_id: AAV35_008465
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: AAV35_008470
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: AAV35_008480
symbol: AKG04833.1
gene_biotype: protein_coding
description:
  Thiaminase II; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family.


ensembl_gene_id: AAV35_008565
symbol: AKG04850.1
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: AAV35_008575
symbol: AKG04852.1
gene_biotype: protein_coding
description:
  Composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism.


ensembl_gene_id: AAV35_008685
symbol: AKG04872.1
gene_biotype: protein_coding
description:
  CDP-alcohol phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: AAV35_008715
symbol: kynB
gene_biotype: protein_coding
description:
  Arylformamidase; Catalyzes the hydrolysis of N-formyl-L-kynurenine to L- kynurenine, the second step in the kynurenine pathway of tryptophan degradation.


ensembl_gene_id: AAV35_008720
symbol: kynU
gene_biotype: protein_coding
description:
  Kynureninase; Catalyzes the cleavage of L-kynurenine (L-Kyn) and L-3- hydroxykynurenine (L-3OHKyn) into anthranilic acid (AA) and 3- hydroxyanthranilic acid (3-OHAA), respectively.


ensembl_gene_id: AAV35_008745
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: AAV35_008790
symbol: AKG04890.1
gene_biotype: protein_coding
description:
  PTS mannose transporter subunit IIABC; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel.


ensembl_gene_id: AAV35_008840
symbol: psuG
gene_biotype: protein_coding
description:
  Pseudouridine-5-phosphate glycosidase; Catalyzes the reversible cleavage of pseudouridine 5'- phosphate (PsiMP) to ribose 5-phosphate and uracil. Functions biologically in the cleavage direction, as part of a pseudouridine degradation pathway; Belongs to the pseudouridine-5'-phosphate glycosidase family.


ensembl_gene_id: AAV35_008855
symbol: AKG04901.1
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: AAV35_008860
symbol: AKG04902.1
gene_biotype: protein_coding
description:
  23S rRNA (uracil-5-)-methyltransferase RumA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: AAV35_008880
symbol: AKG04906.1
gene_biotype: protein_coding
description:
  Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.


ensembl_gene_id: AAV35_008995
symbol: AKG04926.1
gene_biotype: protein_coding
description:
  Pyruvate oxidase; Catalyzes the formation of acetyl phosphate from pyruvate; Belongs to the TPP enzyme family.


ensembl_gene_id: AAV35_009005
symbol: AKG04927.1
gene_biotype: protein_coding
description:
  Iron ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: AAV35_009010
symbol: ANC70225.2
gene_biotype: protein_coding
description:
  Iron ABC transporter; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: AAV35_009020
symbol: AKG05759.1
gene_biotype: protein_coding
description:
  Iron-enterobactin transporter ATP-binding protein; With FepBDE is involved in the transport of ferric enterobactin.


ensembl_gene_id: AAV35_009090
symbol: AKG04939.1
gene_biotype: protein_coding
description:
  Cytochrome aa3 quinol oxidase subunit II; Catalyzes quinol oxidation with the concomitant reduction of oxygen to water. Subunit II transfers the electrons from a quinol to the binuclear center of the catalytic subunit I.


ensembl_gene_id: AAV35_009155
symbol: AKG04951.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Asymmetrical; catalyzes the formation of NTP and NMP from P(1),P(4)-bis(5'-nucleosyl) tetraphosphate; acts on bis(5'-guanosyl) tetraphosphate, bis(5'-xanthosyl)-tetraphosphate, on bis(5'-adenosyl)-tetraphosphate, and bis(5'-uridyl)-tetraphosphate.


ensembl_gene_id: AAV35_009160
symbol: AKG04952.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: AAV35_009200
symbol: mecA
gene_biotype: protein_coding
description:
  Adaptor protein MecA; Enables the recognition and targeting of unfolded and aggregated proteins to the ClpC protease or to other proteins involved in proteolysis. Acts negatively in the development of competence by binding ComK and recruiting it to the ClpCP protease. When overexpressed, inhibits sporulation. Also involved in Spx degradation by ClpC.


ensembl_gene_id: AAV35_009205
symbol: spxA
gene_biotype: protein_coding
description:
  Transcriptional regulator Spx; Interferes with activator-stimulated transcription by interaction with the RNA polymerase alpha-CTD. May function to globally reduce transcription of genes involved in growth- and development- promoting processes and to increase transcription of genes involved in thiol homeostasis, during periods of extreme stress. Belongs to the ArsC family. Spx subfamily.


ensembl_gene_id: AAV35_009250
symbol: trpS
gene_biotype: protein_coding
description:
  tryptophan--tRNA ligase; Catalyzes the attachment of tryptophan to tRNA(Trp). Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: AAV35_009260
symbol: AKG04971.1
gene_biotype: protein_coding
description:
  Beta-ketoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: AAV35_009265
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: AAV35_009270
symbol: uppP
gene_biotype: protein_coding
description:
  UDP pyrophosphate phosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: AAV35_009335
symbol: rocD
gene_biotype: protein_coding
description:
  Ornithine--oxo-acid transaminase; Catalyzes the interconversion of ornithine to glutamate semialdehyde.


ensembl_gene_id: AAV35_009355
symbol: addB
gene_biotype: protein_coding
description:
  Helicase-exonuclease AddAB subunit AddB; ATP-dependent DNA helicase; Belongs to the helicase family. AddB/RexB type 1 subfamily.


ensembl_gene_id: AAV35_009410
symbol: AKG04998.1
gene_biotype: protein_coding
description:
  Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.


ensembl_gene_id: AAV35_009415
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: AAV35_009420
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: AAV35_009530
symbol: prsA
gene_biotype: protein_coding
description:
  Foldase; Plays a major role in protein secretion by helping the post- translocational extracellular folding of several secreted proteins.


ensembl_gene_id: AAV35_009560
symbol: AKG05024.1
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA.


ensembl_gene_id: AAV35_009590
symbol: argD
gene_biotype: protein_coding
description:
  Aspartate aminotransferase family protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: AAV35_009600
symbol: argJ
gene_biotype: protein_coding
description:
  Bifunctional ornithine acetyltransferase/N-acetylglutamate synthase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: AAV35_009605
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: AAV35_009620
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: AAV35_009670
symbol: map
gene_biotype: protein_coding
description:
  Type I methionyl aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: AAV35_009740
symbol: sigI
gene_biotype: protein_coding
description:
  RNA polymerase sigma-I factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; Belongs to the sigma-70 factor family. SigI subfamily.


ensembl_gene_id: AAV35_009760
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: AAV35_009775
symbol: fecD
gene_biotype: protein_coding
description:
  Iron-dicitrate transporter subunit FecD; Ferric citrate binds FecA and is transported across the outer membrane while transmits a signal across the cytoplasmic membrane protein FecR. FecR transmits a signal across the membrane and activates the cytoplasmic FecI that directs the RNA polymerase to express the fecABCDE operon (which encodes the ferric citrate outer membrane receptor and the ferric citrate ABC transporter), as well as fecIR. FecD is one of two (along with FecC) integral membrane protein components of the iron dicitrate ABC transporter; Belongs to the binding-protein-depend [...]


ensembl_gene_id: AAV35_009780
symbol: AKG05064.1
gene_biotype: protein_coding
description:
  Iron-siderophore ABC transporter permease; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: AAV35_009790
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: AAV35_009800
symbol: AKG05068.1
gene_biotype: protein_coding
description:
  Dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: AAV35_009805
symbol: odhA
gene_biotype: protein_coding
description:
  2-oxoglutarate dehydrogenase E1 component; E1 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the decarboxylation of 2-oxoglutarate, the first step in the conversion of 2-oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: AAV35_009815
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: AAV35_009820
symbol: AKG05070.1
gene_biotype: protein_coding
description:
  tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: AAV35_009825
symbol: AKG05071.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: AAV35_009830
symbol: queG
gene_biotype: protein_coding
description:
  tRNA epoxyqueuosine(34) reductase QueG; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family.


ensembl_gene_id: AAV35_009965
symbol: hemL-2
gene_biotype: protein_coding
description:
  Aspartate aminotransferase family protein; Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway.


ensembl_gene_id: AAV35_010025
symbol: AKG05091.1
gene_biotype: protein_coding
description:
  PTS glucose transporter subunit IICBA; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel.


ensembl_gene_id: AAV35_010090
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: AAV35_010095
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: AAV35_010110
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: AAV35_010115
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]


ensembl_gene_id: AAV35_010140
symbol: AKG05108.1
gene_biotype: protein_coding
description:
  RNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: AAV35_010260
symbol: AKG05130.1
gene_biotype: protein_coding
description:
  2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.


ensembl_gene_id: AAV35_010305
symbol: AKG05138.1
gene_biotype: protein_coding
description:
  Gluconate 5-dehydrogenase; Involved in the nonphosphorylative, ketogenic oxidation of glucose and oxidizes gluconate to 5-ketogluconate.


ensembl_gene_id: AAV35_010350
symbol: msrA-3
gene_biotype: protein_coding
description:
  Peptide-methionine (S)-S-oxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: AAV35_010360
symbol: ppc
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.


ensembl_gene_id: AAV35_010500
symbol: pxpA
gene_biotype: protein_coding
description:
  Lactam utilization protein LamB; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.


ensembl_gene_id: AAV35_010605
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: AAV35_010610
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: AAV35_010615
symbol: gatC
gene_biotype: protein_coding
description:
  asparaginyl/glutamyl-tRNA amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: AAV35_010620
symbol: AKG05191.1
gene_biotype: protein_coding
description:
  Sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: AAV35_010630
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase (NAD(+)) LigA; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: AAV35_010665
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: AAV35_010675
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: AAV35_010680
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase II; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist  [...]


ensembl_gene_id: AAV35_010685
symbol: purQ
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase I; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]


ensembl_gene_id: AAV35_010690
symbol: purS
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase subunit PurS; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought  [...]


ensembl_gene_id: AAV35_010705
symbol: purK
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide synthase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: AAV35_010710
symbol: purE
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: AAV35_010745
symbol: AKG05215.1
gene_biotype: protein_coding
description:
  LL-diaminopimelate aminotransferase; Produces methionine from 2-keto-4-methylthiobutyrate and glutamine in vitro; mutations do not affect methionine salvage in vivo however.


ensembl_gene_id: AAV35_010750
symbol: purU
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).


ensembl_gene_id: AAV35_010870
symbol: metN-2
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: AAV35_010955
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: AAV35_010960
symbol: AKG05251.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein MoeB; Catalyzes the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of MoaD or ThiS in the molybdopterin or thiamin pyrophosphate biosynthesis pathways.


ensembl_gene_id: AAV35_010990
symbol: lcdH
gene_biotype: protein_coding
description:
  3-hydroxybutyryl-CoA dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.


ensembl_gene_id: AAV35_011050
symbol: AKG05266.1
gene_biotype: protein_coding
description:
  Peroxiredoxin; Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.


ensembl_gene_id: AAV35_011560
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: AAV35_011565
symbol: groS
gene_biotype: protein_coding
description:
  Co-chaperone GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: AAV35_011620
symbol: rex
gene_biotype: protein_coding
description:
  Redox-sensing transcriptional repressor Rex; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: AAV35_011630
symbol: tsaD
gene_biotype: protein_coding
description:
  tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: AAV35_011635
symbol: AKG05802.1
gene_biotype: protein_coding
description:
  Ribosomal-protein-alanine N-acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.


ensembl_gene_id: AAV35_011650
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-phosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: AAV35_011755
symbol: AKG05373.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor SigB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: AAV35_011760
symbol: rsbW
gene_biotype: protein_coding
description:
  Anti-sigma B factor RsbW; Negative regulator of sigma-B activity. Phosphorylates and inactivates its specific antagonist protein, RsbV. Upon phosphorylation of RsbV, RsbW is released and binds to sigma-B, thereby blocking its ability to form an RNA polymerase holoenzyme (E-sigma-B).


ensembl_gene_id: AAV35_011800
symbol: alr
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: AAV35_011805
symbol: nnrE
gene_biotype: protein_coding
description:
  Hypothetical protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epi [...]


ensembl_gene_id: AAV35_011810
symbol: acpS
gene_biotype: protein_coding
description:
  holo-ACP synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: AAV35_011975
symbol: AKG05411.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: AAV35_011980
symbol: AKG05412.1
gene_biotype: protein_coding
description:
  Ribonucleotide-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.


ensembl_gene_id: AAV35_012020
symbol: AKG05419.1
gene_biotype: protein_coding
description:
  O-acetylhomoserine aminocarboxypropyltransferase; Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol.


ensembl_gene_id: AAV35_012100
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.


ensembl_gene_id: AAV35_012255
symbol: AKG05465.1
gene_biotype: protein_coding
description:
  Arsenate reductase (thioredoxin); Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: AAV35_012260
symbol: ANC70230.1
gene_biotype: protein_coding
description:
  Arsenical efflux pump membrane protein ArsB; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family.


ensembl_gene_id: AAV35_012350
symbol: glmS
gene_biotype: protein_coding
description:
  Glutamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: AAV35_012355
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: AAV35_012365
symbol: dacA
gene_biotype: protein_coding
description:
  TIGR00159 family protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: AAV35_012480
symbol: AKG05492.1
gene_biotype: protein_coding
description:
  Chromosome partitioning protein ParA; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: AAV35_012515
symbol: AKG05499.1
gene_biotype: protein_coding
description:
  Deoxyribonuclease HsdR; Subunit R is required for both nuclease and ATPase activities, but not for modification.


ensembl_gene_id: AAV35_012915
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: AAV35_012920
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine(38-40) synthase TruA; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: AAV35_012925
symbol: ecfT
gene_biotype: protein_coding
description:
  Transporter; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: AAV35_012930
symbol: ecfA
gene_biotype: protein_coding
description:
  Energy-coupling factor transporter ATPase; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: AAV35_012945
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: AAV35_012950
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: AAV35_012955
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: AAV35_012965
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: AAV35_012975
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: AAV35_012980
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: AAV35_012985
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: AAV35_012995
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: AAV35_013000
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: AAV35_013005
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: AAV35_013010
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: AAV35_013015
symbol: rpsN
gene_biotype: protein_coding
description:
  30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: AAV35_013020
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: AAV35_013025
symbol: rplX
gene_biotype: protein_coding
description:
  50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: AAV35_013030
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: AAV35_013035
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: AAV35_013045
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: AAV35_013050
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: AAV35_013055
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: AAV35_013060
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: AAV35_013065
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: AAV35_013070
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: AAV35_013080
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: AAV35_013085
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: AAV35_013090
symbol: tuf
gene_biotype: protein_coding
description:
  Translation elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: AAV35_013095
symbol: fusA
gene_biotype: protein_coding
description:
  Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]


ensembl_gene_id: AAV35_013100
symbol: rpsG
gene_biotype: protein_coding
description:
  30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: AAV35_013105
symbol: rpsL
gene_biotype: protein_coding
description:
  30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: AAV35_013115
symbol: rpoC
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: AAV35_013130
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: AAV35_013135
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: AAV35_013140
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: AAV35_013145
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: AAV35_013150
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription termination/antitermination protein NusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: AAV35_013155
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: AAV35_013170
symbol: AKG05613.1
gene_biotype: protein_coding
description:
  23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: AAV35_013175
symbol: mrnC
gene_biotype: protein_coding
description:
  Ribonuclease III; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.


ensembl_gene_id: AAV35_013190
symbol: gltX
gene_biotype: protein_coding
description:
  glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: AAV35_013195
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: AAV35_013200
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: AAV35_013210
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: AAV35_013225
symbol: mcsB
gene_biotype: protein_coding
description:
  Protein arginine kinase; Catalyzes the specific phosphorylation of arginine residues in a large number of proteins. Is part of the bacterial stress response system. Protein arginine phosphorylation has a physiologically important role and is involved in the regulation of many critical cellular processes, such as protein homeostasis, motility, competence, and stringent and stress responses, by regulating gene expression and protein activity.


ensembl_gene_id: AAV35_013335
symbol: AKG05630.1
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: AAV35_013350
symbol: hslO
gene_biotype: protein_coding
description:
  Hsp33 family molecular chaperone; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: AAV35_013355
symbol: coaX
gene_biotype: protein_coding
description:
  Pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: AAV35_013360
symbol: ftsH
gene_biotype: protein_coding
description:
  Cell division protein FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: AAV35_013365
symbol: AKG03256.1
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: AAV35_013370
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA lysidine(34) synthetase TilS; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: AAV35_013410
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: AAV35_013415
symbol: pth
gene_biotype: protein_coding
description:
  aminoacyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: AAV35_013420
symbol: rplY
gene_biotype: protein_coding
description:
  50S ribosomal protein L25/general stress protein Ctc; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: AAV35_013425
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: AAV35_013430
symbol: glmU
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: AAV35_013445
symbol: ipk
gene_biotype: protein_coding
description:
  4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: AAV35_013460
symbol: rsmA
gene_biotype: protein_coding
description:
  16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: AAV35_013465
symbol: rnmV
gene_biotype: protein_coding
description:
  Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.


ensembl_gene_id: AAV35_013480
symbol: metG
gene_biotype: protein_coding
description:
  methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: AAV35_013490
symbol: rsmI
gene_biotype: protein_coding
description:
  16S rRNA (cytidine(1402)-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: AAV35_013505
symbol: AKG05637.1
gene_biotype: protein_coding
description:
  DNA replication initiation control protein YabA; Involved in initiation control of chromosome replication. Belongs to the YabA family.


ensembl_gene_id: AAV35_013530
symbol: tmk
gene_biotype: protein_coding
description:
  dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: AAV35_013560
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: AAV35_013565
symbol: AKG03288.1
gene_biotype: protein_coding
description:
  YbaB/EbfC family nucleoid-associated protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: AAV35_013570
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: AAV35_013575
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: AAV35_013685
symbol: serS
gene_biotype: protein_coding
description:
  serine--tRNA ligase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: AAV35_013695
symbol: pdxT
gene_biotype: protein_coding
description:
  Glutamine amidotransferase subunit PdxT; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.


ensembl_gene_id: AAV35_013700
symbol: pdxS
gene_biotype: protein_coding
description:
  Pyridoxal biosynthesis lyase PdxS; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.


ensembl_gene_id: AAV35_013710
symbol: guaB
gene_biotype: protein_coding
description:
  IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: AAV35_013720
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


# pathwayInfo

id: CL:1010
description: Mixed, incl. Glycerol metabolism, and Regulation of carbohydrate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1010_Mixed,_incl._Glycerol_metabolism,_and_Regulation_of_carbohydrate_metabolic_process


id: CL:1019
description: Mixed, incl. Regulation of catabolic process, and LytR_cpsA_psr family
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1019_Mixed,_incl._Regulation_of_catabolic_process,_and_LytR_cpsA_psr_family


id: CL:1028
description: Mixed, incl. DNA-(apurinic or apyrimidinic site) endonuclease activity, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1028_Mixed,_incl._DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity,_and_Coenzyme_A_biosynthesis


id: CL:1031
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1031_Mixed,_incl._RNA_adenylyltransferase_activity,_and_NTP_pyrophosphohydrolase_MazG,_putative_catalytic_core

description:
  Mixed, incl. RNA adenylyltransferase activity, and NTP pyrophosphohydrolase MazG, putative catalytic core


id: CL:104
description: Mixed, incl. Large ribosomal subunit, and Translation protein, beta-barrel domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:104_Mixed,_incl._Large_ribosomal_subunit,_and_Translation_protein,_beta-barrel_domain_superfamily


id: CL:1046
description: MutM-like, N-terminal, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1046_MutM-like,_N-terminal,_and_Coenzyme_A_biosynthesis


id: CL:1057
description: Mixed, incl. Sulfur relay system, and RNA capping
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1057_Mixed,_incl._Sulfur_relay_system,_and_RNA_capping


id: CL:1059
description: Mixed, incl. Transcription regulator Rrf2, and UvrD-like helicase C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1059_Mixed,_incl._Transcription_regulator_Rrf2,_and_UvrD-like_helicase_C-terminal_domain


id: CL:1078
description: Mixed, incl. RNA capping, and O-methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1078_Mixed,_incl._RNA_capping,_and_O-methyltransferase_activity


id: CL:1090
description: Mixed, incl. Exoribonuclease activity, and D-Glutamine and D-glutamate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1090_Mixed,_incl._Exoribonuclease_activity,_and_D-Glutamine_and_D-glutamate_metabolism


id: CL:1092
description: Exoribonuclease activity, and Nucleotide metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1092_Exoribonuclease_activity,_and_Nucleotide_metabolism


id: CL:1104
description: Mixed, incl. Carbohydrate kinase, and Recombinase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1104_Mixed,_incl._Carbohydrate_kinase,_and_Recombinase,_conserved_site


id: CL:1117
description: Mixed, incl. Carbon metabolism, and Fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1117_Mixed,_incl._Carbon_metabolism,_and_Fatty_acid_metabolic_process


id: CL:1118
description: Carbon metabolism, and Fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1118_Carbon_metabolism,_and_Fatty_acid_metabolic_process


id: CL:1119
description: Carbon metabolism, and Fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1119_Carbon_metabolism,_and_Fatty_acid_metabolic_process


id: CL:1120
description: Fatty acid metabolic process, and acyl-CoA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1120_Fatty_acid_metabolic_process,_and_acyl-CoA_metabolic_process


id: CL:1121
description: Fatty acid metabolic process, and acyl-CoA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1121_Fatty_acid_metabolic_process,_and_acyl-CoA_metabolic_process


id: CL:1122
description: Fatty acid biosynthesis, and Propanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1122_Fatty_acid_biosynthesis,_and_Propanoate_metabolism


id: CL:1124
description: CoA carboxylase activity, and Biotin-lipoyl like
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1124_CoA_carboxylase_activity,_and_Biotin-lipoyl_like


id: CL:1151
description: Mixed, incl. acyl-CoA metabolic process, and Ascorbate and aldarate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1151_Mixed,_incl._acyl-CoA_metabolic_process,_and_Ascorbate_and_aldarate_metabolism


id: CL:1153
description: Ascorbate and aldarate metabolism, and ANL, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1153_Ascorbate_and_aldarate_metabolism,_and_ANL,_N-terminal_domain


id: CL:116
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:116_Mixed,_incl._Ribosomal_protein_L2,_domain_2,_and_Nucleotide-binding_alpha-beta_plait_domain_superfamily

description:
  Mixed, incl. Ribosomal protein L2, domain 2, and Nucleotide-binding alpha-beta plait domain superfamily


id: CL:1177
description: Lipid oxidation, and Phenylalanine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1177_Lipid_oxidation,_and_Phenylalanine_metabolism


id: CL:1179
description: Lipid oxidation, and Phenylalanine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1179_Lipid_oxidation,_and_Phenylalanine_metabolism


id: CL:1181
description: Benzoate degradation, and Acyl-CoA dehydrogenase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1181_Benzoate_degradation,_and_Acyl-CoA_dehydrogenase,_conserved_site


id: CL:1184
description: Thiolase, and 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1184_Thiolase,_and_3-hydroxyacyl-CoA_dehydrogenase,_NAD_binding_domain


id: CL:1217
description: Methylmalonyl-CoA mutase, and Tetracyclin repressor-like, C-terminal domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1217_Methylmalonyl-CoA_mutase,_and_Tetracyclin_repressor-like,_C-terminal_domain_superfamily


id: CL:1228
description: Mixed, incl. Aquaporin-like, and Protein of unknown function DUF2812
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1228_Mixed,_incl._Aquaporin-like,_and_Protein_of_unknown_function_DUF2812


id: CL:1231
description: Mixed, incl. HMGL-like, and Acetyl-CoA carboxylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1231_Mixed,_incl._HMGL-like,_and_Acetyl-CoA_carboxylase


id: CL:1247
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1247_Mixed,_incl._Citrate_cycle_(TCA_cycle),_and_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors

description:
  Mixed, incl. Citrate cycle (TCA cycle), and Oxidoreductase activity, acting on the CH-NH2 group of donors


id: CL:1248
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1248_Mixed,_incl._Citrate_cycle_(TCA_cycle),_and_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors

description:
  Mixed, incl. Citrate cycle (TCA cycle), and Oxidoreductase activity, acting on the CH-NH2 group of donors


id: CL:1250
description: Citrate cycle (TCA cycle), and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1250_Citrate_cycle_(TCA_cycle),_and_Nitrogen_metabolism


id: CL:1251
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1251_Mixed,_incl._Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_and_Malate_dehydrogenase_activity

description:
  Mixed, incl. Oxidoreductase activity, acting on the CH-NH2 group of donors, and Malate dehydrogenase activity


id: CL:1253
description: Citrate cycle (TCA cycle), and Glutamate dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1253_Citrate_cycle_(TCA_cycle),_and_Glutamate_dehydrogenase


id: CL:1287
description: CoA-ligase, and Anaerobic respiration
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1287_CoA-ligase,_and_Anaerobic_respiration


id: CL:1308
description: Mixed, incl. Protein lipoylation, and Thiamin diphosphate-binding fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1308_Mixed,_incl._Protein_lipoylation,_and_Thiamin_diphosphate-binding_fold


id: CL:1309
description: Lipoic acid metabolism, and Thiamin diphosphate-binding fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1309_Lipoic_acid_metabolism,_and_Thiamin_diphosphate-binding_fold


id: CL:1311
description: Thiamin diphosphate-binding fold, and Dihydrolipoamide dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1311_Thiamin_diphosphate-binding_fold,_and_Dihydrolipoamide_dehydrogenase


id: CL:1338
description: Glycine catabolic process, and One-carbon metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1338_Glycine_catabolic_process,_and_One-carbon_metabolism


id: CL:1351
description: Mixed, incl. Acetokinase family, and DNA binding HTH domain, Fis-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1351_Mixed,_incl._Acetokinase_family,_and_DNA_binding_HTH_domain,_Fis-type


id: CL:1361
description: Synthesis and degradation of ketone bodies, and Protein of unknown function DUF2187
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1361_Synthesis_and_degradation_of_ketone_bodies,_and_Protein_of_unknown_function_DUF2187


id: CL:1373
description: Mixed, incl. CoA-ligase activity, and Cytochrome P450
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1373_Mixed,_incl._CoA-ligase_activity,_and_Cytochrome_P450


id: CL:1375
description: Mixed, incl. CoA-ligase activity, and Cytochrome P450
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1375_Mixed,_incl._CoA-ligase_activity,_and_Cytochrome_P450


id: CL:1376
description: Mixed, incl. CoA-ligase activity, and Cytochrome P450
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1376_Mixed,_incl._CoA-ligase_activity,_and_Cytochrome_P450


id: CL:1378
description: Cytochrome P450, and CoA-ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1378_Cytochrome_P450,_and_CoA-ligase_activity


id: CL:1401
description: Mixed, incl. ABC transporter Uup, C-terminal, and CoA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1401_Mixed,_incl._ABC_transporter_Uup,_C-terminal,_and_CoA-binding


id: CL:1415
description: Mixed, incl. Membrane transport protein, and Aminoglycoside phosphotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1415_Mixed,_incl._Membrane_transport_protein,_and_Aminoglycoside_phosphotransferase


id: CL:1418
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1418_Mixed,_incl._Aminoglycoside_phosphotransferase,_and_DNA-binding_HTH_domain,_TetR-type,_conserved_site

description:
  Mixed, incl. Aminoglycoside phosphotransferase, and DNA-binding HTH domain, TetR-type, conserved site


id: CL:1435
description: Carbohydrate metabolic process, and Import across plasma membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1435_Carbohydrate_metabolic_process,_and_Import_across_plasma_membrane


id: CL:1436
description: Carbohydrate metabolic process, and Import across plasma membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1436_Carbohydrate_metabolic_process,_and_Import_across_plasma_membrane


id: CL:1438
description: Mixed, incl. Carbohydrate catabolic process, and Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1438_Mixed,_incl._Carbohydrate_catabolic_process,_and_Phosphotransferase_system_(PTS)


id: CL:1440
description: Mixed, incl. Carbohydrate catabolic process, and Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1440_Mixed,_incl._Carbohydrate_catabolic_process,_and_Phosphotransferase_system_(PTS)


id: CL:1441
description: Phosphotransferase system (PTS), and Starch and sucrose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1441_Phosphotransferase_system_(PTS),_and_Starch_and_sucrose_metabolism


id: CL:1442
description: Phosphotransferase system (PTS), and Starch and sucrose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1442_Phosphotransferase_system_(PTS),_and_Starch_and_sucrose_metabolism


id: CL:1445
description: Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1445_Phosphotransferase_system_(PTS)


id: CL:1465
description: Phosphotransferase system, sugar-specific permease EIIA type 1, and ROK family
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1465_Phosphotransferase_system,_sugar-specific_permease_EIIA_type_1,_and_ROK_family


id: CL:1474
description: Sucrose metabolic process, and Alpha-amylase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1474_Sucrose_metabolic_process,_and_Alpha-amylase_domain


id: CL:1483
description: Mixed, incl. N-acetylglucosamine metabolic process, and Transcription regulator HTH, GntR
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1483_Mixed,_incl._N-acetylglucosamine_metabolic_process,_and_Transcription_regulator_HTH,_GntR


id: CL:1496
description: Pentose phosphate pathway, and Glycolytic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1496_Pentose_phosphate_pathway,_and_Glycolytic_process


id: CL:1498
description: Glycolytic process, and NADPH regeneration
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1498_Glycolytic_process,_and_NADPH_regeneration


id: CL:1501
description: Glycolytic process, and Glyceraldehyde-3-phosphate dehydrogenase, type I
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1501_Glycolytic_process,_and_Glyceraldehyde-3-phosphate_dehydrogenase,_type_I


id: CL:1503
description: Glycolysis, and Transketolase or transaldolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1503_Glycolysis,_and_Transketolase_or_transaldolase_activity


id: CL:151
description: Small ribosomal subunit, and Ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:151_Small_ribosomal_subunit,_and_Ribosome


id: CL:1536
description: Amine-lyase activity, and Ribokinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1536_Amine-lyase_activity,_and_Ribokinase_activity


id: CL:1560
description: Mixed, incl. Glycosyl hydrolase, all-beta, and Protein import
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1560_Mixed,_incl._Glycosyl_hydrolase,_all-beta,_and_Protein_import


id: CL:1574
description: Glycerolipid metabolism, and glycerol-3-phosphate dehydrogenase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1574_Glycerolipid_metabolism,_and_glycerol-3-phosphate_dehydrogenase_complex


id: CL:1575
description: Alditol catabolic process, and Glycerone kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1575_Alditol_catabolic_process,_and_Glycerone_kinase_activity


id: CL:1586
description: Diacylglycerol/lipid kinase, and Phosphate acyltransferases
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1586_Diacylglycerol/lipid_kinase,_and_Phosphate_acyltransferases


id: CL:1609
description: Cellular amino acid biosynthetic process, and Nucleoside monophosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1609_Cellular_amino_acid_biosynthetic_process,_and_Nucleoside_monophosphate_biosynthetic_process


id: CL:1610
description: Amino-acid biosynthesis, and Vitamin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1610_Amino-acid_biosynthesis,_and_Vitamin_binding


id: CL:1611
description: Cellular amino acid biosynthetic process, and Transsulfuration
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1611_Cellular_amino_acid_biosynthetic_process,_and_Transsulfuration


id: CL:1612
description: Branched-chain amino acid biosynthetic process, and Cysteine and methionine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1612_Branched-chain_amino_acid_biosynthetic_process,_and_Cysteine_and_methionine_metabolism


id: CL:1613
description: Branched-chain amino acid biosynthetic process, and Cysteine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1613_Branched-chain_amino_acid_biosynthetic_process,_and_Cysteine_metabolic_process


id: CL:1614
description: Valine, leucine and isoleucine biosynthesis, and Threonine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1614_Valine,_leucine_and_isoleucine_biosynthesis,_and_Threonine_biosynthesis


id: CL:1615
description: Valine, leucine and isoleucine biosynthesis, and Threonine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1615_Valine,_leucine_and_isoleucine_biosynthesis,_and_Threonine_biosynthesis


id: CL:1617
description: C5-Branched dibasic acid metabolism, and HMGL-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1617_C5-Branched_dibasic_acid_metabolism,_and_HMGL-like


id: CL:1637
description: Threonine biosynthesis, and Branched-chain aminotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1637_Threonine_biosynthesis,_and_Branched-chain_aminotransferase


id: CL:1659
description: Transsulfuration, and Methionine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1659_Transsulfuration,_and_Methionine_metabolic_process


id: CL:1678
description: Mixed, incl. Serine biosynthesis, and Alanine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1678_Mixed,_incl._Serine_biosynthesis,_and_Alanine_metabolic_process


id: CL:1693
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Histidine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1693_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Histidine_biosynthetic_process


id: CL:1694
description: Phenylalanine, tyrosine and tryptophan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1694_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis


id: CL:1695
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1695_Chorismate_metabolic_process,_and_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway

description:
  Chorismate metabolic process, and Aromatic amino acid family biosynthetic process, prephenate pathway


id: CL:1709
description: Chorismate mutase activity, and Novobiocin biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1709_Chorismate_mutase_activity,_and_Novobiocin_biosynthesis


id: CL:1759
description: Lysine biosynthesis, and Arginine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1759_Lysine_biosynthesis,_and_Arginine_biosynthesis


id: CL:1761
description: Lysine biosynthesis, and Aspartate kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1761_Lysine_biosynthesis,_and_Aspartate_kinase


id: CL:1805
description: Ribonucleoside monophosphate biosynthetic process, and Pyrimidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1805_Ribonucleoside_monophosphate_biosynthetic_process,_and_Pyrimidine_metabolism


id: CL:1806
description: Ribonucleoside monophosphate biosynthetic process, and Permease family
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1806_Ribonucleoside_monophosphate_biosynthetic_process,_and_Permease_family


id: CL:1808
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1808_Ribonucleoside_monophosphate_biosynthetic_process,_and_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity

description:
  Ribonucleoside monophosphate biosynthetic process, and Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity


id: CL:1811
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1811_De_novo_IMP_biosynthetic_process


id: CL:1813
description: De novo IMP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1813_De_novo_IMP_biosynthetic_process


id: CL:1835
description: GMP biosynthesis, and AMP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1835_GMP_biosynthesis,_and_AMP_metabolic_process


id: CL:1848
description: Pyrimidine biosynthesis, and Xanthine/uracil permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1848_Pyrimidine_biosynthesis,_and_Xanthine/uracil_permease


id: CL:1883
description: Pyrimidine metabolism, and Purine nucleobase catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1883_Pyrimidine_metabolism,_and_Purine_nucleobase_catabolic_process


id: CL:1885
description: Mixed, incl. Nucleoside catabolic process, and UMP salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1885_Mixed,_incl._Nucleoside_catabolic_process,_and_UMP_salvage


id: CL:1887
description: Mixed, incl. Pyrimidine nucleoside metabolic process, and Phosphorylase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1887_Mixed,_incl._Pyrimidine_nucleoside_metabolic_process,_and_Phosphorylase_superfamily


id: CL:1922
description: Mixed, incl. Porphyrin and chlorophyll metabolism, and Riboflavin metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1922_Mixed,_incl._Porphyrin_and_chlorophyll_metabolism,_and_Riboflavin_metabolism


id: CL:1923
description: Mixed, incl. Riboflavin metabolism, and Folate biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1923_Mixed,_incl._Riboflavin_metabolism,_and_Folate_biosynthesis


id: CL:1924
description: Riboflavin metabolism, and Folate biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1924_Riboflavin_metabolism,_and_Folate_biosynthesis


id: CL:1927
description: Riboflavin biosynthesis, and ATP synthase subunit alpha, N-terminal domain-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1927_Riboflavin_biosynthesis,_and_ATP_synthase_subunit_alpha,_N-terminal_domain-like_superfamily


id: CL:1976
description: Porphyrin and chlorophyll metabolism, and Cytochrome C assembly protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1976_Porphyrin_and_chlorophyll_metabolism,_and_Cytochrome_C_assembly_protein


id: CL:1980
description: Protoporphyrinogen IX metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1980_Protoporphyrinogen_IX_metabolic_process


id: CL:1999
description: Mixed, incl. Fusaric acid resistance protein family, and Ferric-uptake regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:1999_Mixed,_incl._Fusaric_acid_resistance_protein_family,_and_Ferric-uptake_regulator


id: CL:2013
description: Mixed, incl. Phosphatidylglycerol metabolic process, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2013_Mixed,_incl._Phosphatidylglycerol_metabolic_process,_and_ABC_transporter,_permease


id: CL:2014
description: Mixed, incl. ABC transporter, permease, and ABC transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2014_Mixed,_incl._ABC_transporter,_permease,_and_ABC_transporter


id: CL:2016
description: ABC transporter, permease, and ABC transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2016_ABC_transporter,_permease,_and_ABC_transporter


id: CL:2042
description: Mixed, incl. Thioredoxin domain, and Response to oxidative stress
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2042_Mixed,_incl._Thioredoxin_domain,_and_Response_to_oxidative_stress


id: CL:2044
description: Mixed, incl. DJ-1/PfpI, and Thioesterase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2044_Mixed,_incl._DJ-1/PfpI,_and_Thioesterase-like_superfamily


id: CL:2062
description: Mixed, incl. Membrane assembly, and Phosphoglycerate mutase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2062_Mixed,_incl._Membrane_assembly,_and_Phosphoglycerate_mutase_family


id: CL:2075
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2075_Ubiquinone_and_other_terpenoid-quinone_biosynthesis,_and_Pyridine_nucleotide-disulphide_oxidoreductase

description:
  Ubiquinone and other terpenoid-quinone biosynthesis, and Pyridine nucleotide-disulphide oxidoreductase


id: CL:2076
description: Mixed, incl. Oxidoreductase activity, acting on NAD(P)H, and Quinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2076_Mixed,_incl._Oxidoreductase_activity,_acting_on_NAD(P)H,_and_Quinone_metabolic_process


id: CL:2078
description: Mixed, incl. Polyprenyl synthetase, and Chromosome condensation
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2078_Mixed,_incl._Polyprenyl_synthetase,_and_Chromosome_condensation


id: CL:2095
description: Ubiquinone and other terpenoid-quinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2095_Ubiquinone_and_other_terpenoid-quinone_biosynthesis


id: CL:2096
description: UbiA prenyltransferase domain containing protein 1, and CoA hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2096_UbiA_prenyltransferase_domain_containing_protein_1,_and_CoA_hydrolase_activity


id: CL:2121
description: Mixed, incl. ABC transporters, and Rhodanese Homology Domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2121_Mixed,_incl._ABC_transporters,_and_Rhodanese_Homology_Domain


id: CL:2123
description: Mixed, incl. Rhodanese Homology Domain, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2123_Mixed,_incl._Rhodanese_Homology_Domain,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:2124
description: Mixed, incl. HTH ArsR-type DNA-binding domain, and E1-E2 ATPase
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2124_Mixed,_incl._HTH_ArsR-type_DNA-binding_domain,_and_E1-E2_ATPase


id: CL:2126
description: Mixed, incl. E1-E2 ATPase, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2126_Mixed,_incl._E1-E2_ATPase,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:2128
description: E1-E2 ATPase, and ArsR-type transcription regulator, HTH motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2128_E1-E2_ATPase,_and_ArsR-type_transcription_regulator,_HTH_motif


id: CL:2154
description: Mixed, incl. Zinc ion transport, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2154_Mixed,_incl._Zinc_ion_transport,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:2166
description: Mixed, incl. Rhodanese Homology Domain, and Glycolate oxidase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2166_Mixed,_incl._Rhodanese_Homology_Domain,_and_Glycolate_oxidase_complex


id: CL:2167
description: Mixed, incl. Rhodanese Homology Domain, and Sulfite exporter TauE/SafE
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2167_Mixed,_incl._Rhodanese_Homology_Domain,_and_Sulfite_exporter_TauE/SafE


id: CL:2169
description: Rhodanese Homology Domain, and Metal-sensitive transcriptional repressor
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2169_Rhodanese_Homology_Domain,_and_Metal-sensitive_transcriptional_repressor


id: CL:2186
description: Rhodanese Homology Domain, and Glycolate oxidase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2186_Rhodanese_Homology_Domain,_and_Glycolate_oxidase_complex


id: CL:2203
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2203_Mixed,_incl._Ligand-gated_channel_activity,_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain

description:
  Mixed, incl. Ligand-gated channel activity, and Amino acid ABC transporter, permease protein, 3-TM domain


id: CL:2204
description: Ligand-gated channel activity, and Amino acid ABC transporter, permease protein, 3-TM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2204_Ligand-gated_channel_activity,_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain


id: CL:2207
description: Amino acid ABC transporter, permease protein, 3-TM domain, and Ligand-gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2207_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Ligand-gated_channel_activity


id: CL:2224
description: Mixed, incl. Cell adhesion, and Ferric-uptake regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2224_Mixed,_incl._Cell_adhesion,_and_Ferric-uptake_regulator


id: CL:2239
description: Mixed, incl. Thiamine-containing compound metabolic process, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2239_Mixed,_incl._Thiamine-containing_compound_metabolic_process,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:2240
description: Mixed, incl. ABC transporter, CbiO/EcfA subunit, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2240_Mixed,_incl._ABC_transporter,_CbiO/EcfA_subunit,_and_Cobalt_transport_protein


id: CL:2242
description: Mixed, incl. Alcohol binding, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2242_Mixed,_incl._Alcohol_binding,_and_Cobalt_transport_protein


id: CL:2256
description: ABC transporter, CbiO/EcfA subunit, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2256_ABC_transporter,_CbiO/EcfA_subunit,_and_Cobalt_transport_protein


id: CL:2299
description: Mixed, incl. Integral component of membrane, and DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2299_Mixed,_incl._Integral_component_of_membrane,_and_DNA_binding


id: CL:2301
description: Mixed, incl. Integral component of membrane, and Nucleic acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2301_Mixed,_incl._Integral_component_of_membrane,_and_Nucleic_acid_metabolic_process


id: CL:2302
description: Mixed, incl. Integral component of membrane, and Establishment of competence for transformation
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2302_Mixed,_incl._Integral_component_of_membrane,_and_Establishment_of_competence_for_transformation


id: CL:2303
description: Mixed, incl. Integral component of membrane, and Establishment of competence for transformation
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2303_Mixed,_incl._Integral_component_of_membrane,_and_Establishment_of_competence_for_transformation


id: CL:2304
description: Mixed, incl. Establishment of competence for transformation, and Integral component of membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2304_Mixed,_incl._Establishment_of_competence_for_transformation,_and_Integral_component_of_membrane


id: CL:2305
description: Mixed, incl. Establishment of competence for transformation, and Integral component of membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2305_Mixed,_incl._Establishment_of_competence_for_transformation,_and_Integral_component_of_membrane


id: CL:2307
description: Mixed, incl. Establishment of competence for transformation, and Integral component of membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2307_Mixed,_incl._Establishment_of_competence_for_transformation,_and_Integral_component_of_membrane


id: CL:2308
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2308_Mostly_uncharacterized,_incl._Establishment_of_competence_for_transformation,_and_Sulfatase,_N-terminal

description:
  Mostly uncharacterized, incl. Establishment of competence for transformation, and Sulfatase, N-terminal


id: CL:2310
description: Mixed, incl. Regulation of cell communication, and YheA/YmcA-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2310_Mixed,_incl._Regulation_of_cell_communication,_and_YheA/YmcA-like_domain_superfamily


id: CL:2311
description: Mixed, incl. YheA/YmcA-like domain superfamily, and Regulation of cell communication
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2311_Mixed,_incl._YheA/YmcA-like_domain_superfamily,_and_Regulation_of_cell_communication


id: CL:2313
description: Mixed, incl. Competence, and HDIG domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2313_Mixed,_incl._Competence,_and_HDIG_domain


id: CL:2333
description: Mixed, incl. YheA/YmcA-like domain superfamily, and Polyprenyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2333_Mixed,_incl._YheA/YmcA-like_domain_superfamily,_and_Polyprenyltransferase_activity


id: CL:234
description: Protein transport by the Sec complex, and Protein carrier chaperone
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:234_Protein_transport_by_the_Sec_complex,_and_Protein_carrier_chaperone


id: CL:2348
description: Mixed, incl. Molecular adaptor activity, and Type II CAAX prenyl endopeptidase Rce1-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2348_Mixed,_incl._Molecular_adaptor_activity,_and_Type_II_CAAX_prenyl_endopeptidase_Rce1-like


id: CL:2364
description: Mostly uncharacterized, incl. Sulfatase, N-terminal, and DNA replication, synthesis of RNA primer
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2364_Mostly_uncharacterized,_incl._Sulfatase,_N-terminal,_and_DNA_replication,_synthesis_of_RNA_primer


id: CL:2367
description: Mixed, incl. Sulfatase, N-terminal, and Lipase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2367_Mixed,_incl._Sulfatase,_N-terminal,_and_Lipase_activity


id: CL:2369
description: Mixed, incl. DNA methylase, adenine-specific, and Regulation of lipid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2369_Mixed,_incl._DNA_methylase,_adenine-specific,_and_Regulation_of_lipid_metabolic_process


id: CL:2396
description: Mixed, incl. DNA replication, synthesis of RNA primer, and ArsC family
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2396_Mixed,_incl._DNA_replication,_synthesis_of_RNA_primer,_and_ArsC_family


id: CL:2398
description: Mixed, incl. ArsC family, and Restriction endonuclease type II-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2398_Mixed,_incl._ArsC_family,_and_Restriction_endonuclease_type_II-like


id: CL:2417
description: Mostly uncharacterized, incl. IDEAL domain, and Peptidase C45
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2417_Mostly_uncharacterized,_incl._IDEAL_domain,_and_Peptidase_C45


id: CL:2418
description: Mostly uncharacterized, incl. IDEAL domain, and Peptidase C45
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2418_Mostly_uncharacterized,_incl._IDEAL_domain,_and_Peptidase_C45


id: CL:2419
description: Mostly uncharacterized, incl. IDEAL domain, and Peptidase C45
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2419_Mostly_uncharacterized,_incl._IDEAL_domain,_and_Peptidase_C45


id: CL:2422
description: Mostly uncharacterized, incl. IDEAL domain, and DNA-templated transcription, initiation
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2422_Mostly_uncharacterized,_incl._IDEAL_domain,_and_DNA-templated_transcription,_initiation


id: CL:2423
description: Mixed, incl. IDEAL domain, and DNA-templated transcription, initiation
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2423_Mixed,_incl._IDEAL_domain,_and_DNA-templated_transcription,_initiation


id: CL:2427
description: Mixed, incl. IDEAL domain, and RNA polymerase sigma-70 like
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2427_Mixed,_incl._IDEAL_domain,_and_RNA_polymerase_sigma-70_like


id: CL:2443
description: Mixed, incl. FeS cluster biogenesis, and Domain of unknown function DUF1232
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2443_Mixed,_incl._FeS_cluster_biogenesis,_and_Domain_of_unknown_function_DUF1232


id: CL:2455
description: Mixed, incl. Heme catabolic process, and Regulation of RNA biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2455_Mixed,_incl._Heme_catabolic_process,_and_Regulation_of_RNA_biosynthetic_process


id: CL:2473
description: Mixed, incl. Peptidase C45, and Scaffold protein Nfu/NifU N terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2473_Mixed,_incl._Peptidase_C45,_and_Scaffold_protein_Nfu/NifU_N_terminal


id: CL:248
description: Mixed, incl. K Homology domain, and Ribosomal small subunit biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:248_Mixed,_incl._K_Homology_domain,_and_Ribosomal_small_subunit_biogenesis


id: CL:2485
description: Mixed, incl. Glyoxalase-like domain, and Luciferase family oxidoreductase, group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2485_Mixed,_incl._Glyoxalase-like_domain,_and_Luciferase_family_oxidoreductase,_group_1


id: CL:2497
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2497_Mostly_uncharacterized,_incl._Peptidyl-prolyl_cis-trans_isomerase_domain_superfamily,_and_Hedgehog_signalling/DD-peptidase_zinc-binding_domain_superfamily

description:
  Mostly uncharacterized, incl. Peptidyl-prolyl cis-trans isomerase domain superfamily, and Hedgehog signalling/DD-peptidase zinc-binding domain superfamily


id: CL:2499
description: Mixed, incl. Hedgehog signalling/DD-peptidase zinc-binding domain superfamily, and OsmC/Ohr family
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2499_Mixed,_incl._Hedgehog_signalling/DD-peptidase_zinc-binding_domain_superfamily,_and_OsmC/Ohr_family


id: CL:251
description: Mixed, incl. Ribosomal protein L7Ae/L30e/S12e/Gadd45, and Initiation factor
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:251_Mixed,_incl._Ribosomal_protein_L7Ae/L30e/S12e/Gadd45,_and_Initiation_factor


id: CL:2523
description: Mixed, incl. Arginine-tRNA ligase, and Transposase DDE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2523_Mixed,_incl._Arginine-tRNA_ligase,_and_Transposase_DDE_domain


id: CL:2537
description: Mixed, incl. Phosphorus-oxygen lyase activity, and Intramembrane metalloprotease PrsW
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2537_Mixed,_incl._Phosphorus-oxygen_lyase_activity,_and_Intramembrane_metalloprotease_PrsW


id: CL:2552
description: Mixed, incl. Uncharacterized protein YczE/YyaS-like, and Membrane raft
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2552_Mixed,_incl._Uncharacterized_protein_YczE/YyaS-like,_and_Membrane_raft


id: CL:2569
description: Mixed, incl. Phenylalanly tRNA synthetase, tRNA-binding-domain, and Thioredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2569_Mixed,_incl._Phenylalanly_tRNA_synthetase,_tRNA-binding-domain,_and_Thioredoxin


id: CL:2583
description: Mixed, incl. Endonuclease, and NUDIX domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2583_Mixed,_incl._Endonuclease,_and_NUDIX_domain


id: CL:2585
description: Mixed, incl. Ribonuclease HII, and DNA mismatch repair MutS family
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2585_Mixed,_incl._Ribonuclease_HII,_and_DNA_mismatch_repair_MutS_family


id: CL:2605
description: Mixed, incl. Esterase/lipase, and Nitronate monooxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2605_Mixed,_incl._Esterase/lipase,_and_Nitronate_monooxygenase


id: CL:2630
description: TAT protein transport complex, and Uracil-DNA glycosylase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2630_TAT_protein_transport_complex,_and_Uracil-DNA_glycosylase-like


id: CL:2644
description: Mixed, incl. Electron transport chain, and Cellular component assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2644_Mixed,_incl._Electron_transport_chain,_and_Cellular_component_assembly


id: CL:2646
description: Mixed, incl. Electron transport chain, and Acetoin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2646_Mixed,_incl._Electron_transport_chain,_and_Acetoin_metabolic_process


id: CL:2647
description: Mixed, incl. Electron transport chain, and Acetoin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2647_Mixed,_incl._Electron_transport_chain,_and_Acetoin_metabolic_process


id: CL:2648
description: Mixed, incl. Electron transport chain, and Acetoin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2648_Mixed,_incl._Electron_transport_chain,_and_Acetoin_metabolic_process


id: CL:2649
description: Mixed, incl. Cytochrome-c oxidase activity, and Peptidase M16, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2649_Mixed,_incl._Cytochrome-c_oxidase_activity,_and_Peptidase_M16,_C-terminal


id: CL:2651
description: Cytochrome-c oxidase activity, and Cytochrome b/b6-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2651_Cytochrome-c_oxidase_activity,_and_Cytochrome_b/b6-like_domain_superfamily


id: CL:2652
description: Cytochrome-c oxidase activity, and Cytochrome b/b6-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2652_Cytochrome-c_oxidase_activity,_and_Cytochrome_b/b6-like_domain_superfamily


id: CL:2675
description: ATP synthesis coupled electron transport, and Cytochrome c oxidase, subunit II
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2675_ATP_synthesis_coupled_electron_transport,_and_Cytochrome_c_oxidase,_subunit_II


id: CL:2689
description: Peptidase M16, C-terminal, and Fatty acid elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2689_Peptidase_M16,_C-terminal,_and_Fatty_acid_elongation


id: CL:2698
description: Mostly uncharacterized, incl. Acetoin metabolic process, and Copper chaperone SCO1/SenC
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2698_Mostly_uncharacterized,_incl._Acetoin_metabolic_process,_and_Copper_chaperone_SCO1/SenC


id: CL:2700
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2700_Mostly_uncharacterized,_incl._Cytochrome_c,_Bacillus_subtilis_c550-related,_and_Immunoglobulin-like_fold

description:
  Mostly uncharacterized, incl. Cytochrome c, Bacillus subtilis c550-related, and Immunoglobulin-like fold


id: CL:2703
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2703_Mostly_uncharacterized,_incl._Cytochrome_c,_Bacillus_subtilis_c550-related,_and_Immunoglobulin-like_fold

description:
  Mostly uncharacterized, incl. Cytochrome c, Bacillus subtilis c550-related, and Immunoglobulin-like fold


id: CL:2707
description: Mixed, incl. Positive regulation of sporulation, and Integral component of plasma membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2707_Mixed,_incl._Positive_regulation_of_sporulation,_and_Integral_component_of_plasma_membrane


id: CL:2744
description: Cytochrome complex assembly, and HAMP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2744_Cytochrome_complex_assembly,_and_HAMP_domain


id: CL:2756
description: Mixed, incl. Thioredoxin domain, and Peptidase S58, DmpA
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2756_Mixed,_incl._Thioredoxin_domain,_and_Peptidase_S58,_DmpA


id: CL:2768
description: Mostly uncharacterized, incl. Disulphide isomerase, and Iron-sulfur cluster assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2768_Mostly_uncharacterized,_incl._Disulphide_isomerase,_and_Iron-sulfur_cluster_assembly


id: CL:2769
description: Mixed, incl. Disulphide isomerase, and Iron-sulfur cluster assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2769_Mixed,_incl._Disulphide_isomerase,_and_Iron-sulfur_cluster_assembly


id: CL:2770
description: Mixed, incl. Disulphide isomerase, and Thylakoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2770_Mixed,_incl._Disulphide_isomerase,_and_Thylakoid


id: CL:2771
description: Mixed, incl. Disulphide isomerase, and Thylakoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2771_Mixed,_incl._Disulphide_isomerase,_and_Thylakoid


id: CL:2786
description: Mixed, incl. Putative esterase, and Regulation of signaling
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2786_Mixed,_incl._Putative_esterase,_and_Regulation_of_signaling


id: CL:2795
description: Mixed, incl. FeS cluster biogenesis, and Protein of unknown function DUF1450
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2795_Mixed,_incl._FeS_cluster_biogenesis,_and_Protein_of_unknown_function_DUF1450


id: CL:2806
description: Mixed, incl. Sodium:neurotransmitter symporter, and Haloacid dehalogenase-like hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2806_Mixed,_incl._Sodium:neurotransmitter_symporter,_and_Haloacid_dehalogenase-like_hydrolase


id: CL:2815
description: Mixed, incl. Cilium, and Cell communication
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2815_Mixed,_incl._Cilium,_and_Cell_communication


id: CL:2816
description: Mixed, incl. Cilium, and Cell communication
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2816_Mixed,_incl._Cilium,_and_Cell_communication


id: CL:2817
description: Mixed, incl. Cilium, and Horizontal gene transfer
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2817_Mixed,_incl._Cilium,_and_Horizontal_gene_transfer


id: CL:2818
description: Mixed, incl. Cilium, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2818_Mixed,_incl._Cilium,_and_Diguanylate_cyclase


id: CL:2820
description: Mixed, incl. Flagellar assembly, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2820_Mixed,_incl._Flagellar_assembly,_and_Diguanylate_cyclase


id: CL:2822
description: Flagellar assembly, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2822_Flagellar_assembly,_and_Diguanylate_cyclase


id: CL:2824
description: Flagellar assembly, and Cell projection organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2824_Flagellar_assembly,_and_Cell_projection_organization


id: CL:2827
description: Flagellar assembly, and Chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2827_Flagellar_assembly,_and_Chemotaxis


id: CL:2832
description: Bacterial-type flagellum basal body, and Cell projection assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2832_Bacterial-type_flagellum_basal_body,_and_Cell_projection_assembly


id: CL:2833
description: Cytoskeletal motor activity, and Flagella basal body rod protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2833_Cytoskeletal_motor_activity,_and_Flagella_basal_body_rod_protein


id: CL:2845
description: Flagella basal body rod protein, and Cytoskeletal motor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2845_Flagella_basal_body_rod_protein,_and_Cytoskeletal_motor_activity


id: CL:2854
description: Bacterial flagellum protein export, and Cell projection assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2854_Bacterial_flagellum_protein_export,_and_Cell_projection_assembly


id: CL:2866
description: Taxis, and Magnesium transporter, MgtE intracellular domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2866_Taxis,_and_Magnesium_transporter,_MgtE_intracellular_domain


id: CL:2877
description: Bacterial chemotaxis, and Secreted
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2877_Bacterial_chemotaxis,_and_Secreted


id: CL:2921
description: Diguanylate cyclase, and STAS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2921_Diguanylate_cyclase,_and_STAS_domain


id: CL:2924
description: Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain), and GAF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2924_Motif_C-terminal_to_PAS_motifs_(likely_to_contribute_to_PAS_structural_domain),_and_GAF_domain


id: CL:293
description: Mixed, incl. De novo CTP biosynthetic process, and Cytidylyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:293_Mixed,_incl._De_novo_CTP_biosynthetic_process,_and_Cytidylyltransferase_activity


id: CL:2946
description: Mixed, incl. STAS domain, and PPM-type phosphatase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2946_Mixed,_incl._STAS_domain,_and_PPM-type_phosphatase-like_domain


id: CL:2949
description: STAS domain, and PPM-type phosphatase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2949_STAS_domain,_and_PPM-type_phosphatase-like_domain


id: CL:2982
description: Mixed, incl. Peptidase S26, and Double-strand break repair via homologous recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2982_Mixed,_incl._Peptidase_S26,_and_Double-strand_break_repair_via_homologous_recombination


id: CL:2983
description: Peptidase S26, and Ribonuclease HII
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2983_Peptidase_S26,_and_Ribonuclease_HII


id: CL:2994
description: Double-strand break repair via homologous recombination, and Transmembrane protein TMEM64
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:2994_Double-strand_break_repair_via_homologous_recombination,_and_Transmembrane_protein_TMEM64


id: CL:3004
description: Horizontal gene transfer, and Competence protein ComEA, helix-hairpin-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3004_Horizontal_gene_transfer,_and_Competence_protein_ComEA,_helix-hairpin-helix_domain


id: CL:3006
description: Prokaryotic N-terminal methylation site, and Establishment of competence for transformation
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3006_Prokaryotic_N-terminal_methylation_site,_and_Establishment_of_competence_for_transformation


id: CL:3019
description: Mixed, incl. ComA-like, MBL domain, and Annealing activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3019_Mixed,_incl._ComA-like,_MBL_domain,_and_Annealing_activity


id: CL:3032
description: Mixed, incl. Glutaredoxin, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3032_Mixed,_incl._Glutaredoxin,_and_Sigma-70,_region_4


id: CL:3043
description: Mixed, incl. Phosphorelay signal transduction system, and Peptidase S1C
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3043_Mixed,_incl._Phosphorelay_signal_transduction_system,_and_Peptidase_S1C


id: CL:3045
description: Mixed, incl. Two-component regulatory system, and Peptidase S1C
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3045_Mixed,_incl._Two-component_regulatory_system,_and_Peptidase_S1C


id: CL:3047
description: Mixed, incl. Two-component regulatory system, and Peptidase S1C
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3047_Mixed,_incl._Two-component_regulatory_system,_and_Peptidase_S1C


id: CL:3049
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3049_Two-component_regulatory_system,_and_Signal_transduction_response_regulator,_citrate/malate_metabolism

description:
  Two-component regulatory system, and Signal transduction response regulator, citrate/malate metabolism


id: CL:3064
description: Mixed, incl. PAS fold, and tRNA 3-trailer cleavage
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3064_Mixed,_incl._PAS_fold,_and_tRNA_3-trailer_cleavage


id: CL:3092
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3092_Mixed,_incl._Helix_turn_helix,_Lux_Regulon,_and_Signal_transduction_histidine_kinase,_subgroup_3,_dimerisation_and_phosphoacceptor_domain

description:
  Mixed, incl. Helix_turn_helix, Lux Regulon, and Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain


id: CL:3093
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3093_Helix_turn_helix,_Lux_Regulon,_and_Signal_transduction_histidine_kinase,_subgroup_3,_dimerisation_and_phosphoacceptor_domain

description:
  Helix_turn_helix, Lux Regulon, and Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain


id: CL:3095
description: Helix_turn_helix, Lux Regulon, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3095_Helix_turn_helix,_Lux_Regulon,_and_Histidine_kinase


id: CL:310
description: Anticodon-binding domain of tRNA ligase, and Anticodon binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:310_Anticodon-binding_domain_of_tRNA_ligase,_and_Anticodon_binding_domain


id: CL:3110
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3110_Mixed,_incl._C-methyltransferase_activity,_and_Phosphoenolpyruvate-protein_phosphotransferase_activity

description:
  Mixed, incl. C-methyltransferase activity, and Phosphoenolpyruvate-protein phosphotransferase activity


id: CL:3122
description: Mixed, incl. PspA/IM30, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3122_Mixed,_incl._PspA/IM30,_and_Histidine_kinase


id: CL:3139
description: Mixed, incl. Membrane, and N-acyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3139_Mixed,_incl._Membrane,_and_N-acyltransferase_activity


id: CL:3140
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3140_Mostly_uncharacterized,_incl._N-acyltransferase_activity,_and_Biosynthesis_of_various_secondary_metabolites_-_part_3

description:
  Mostly uncharacterized, incl. N-acyltransferase activity, and Biosynthesis of various secondary metabolites - part 3


id: CL:3141
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3141_Mostly_uncharacterized,_incl._Biosynthesis_of_various_secondary_metabolites_-_part_3,_and_GNAT_domain

description:
  Mostly uncharacterized, incl. Biosynthesis of various secondary metabolites - part 3, and GNAT domain


id: CL:3142
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3142_Mostly_uncharacterized,_incl._Biosynthesis_of_various_secondary_metabolites_-_part_3,_and_GNAT_domain

description:
  Mostly uncharacterized, incl. Biosynthesis of various secondary metabolites - part 3, and GNAT domain


id: CL:3144
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3144_Mostly_uncharacterized,_incl._Biosynthesis_of_various_secondary_metabolites_-_part_3,_and_GNAT_domain

description:
  Mostly uncharacterized, incl. Biosynthesis of various secondary metabolites - part 3, and GNAT domain


id: CL:3145
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3145_Mostly_uncharacterized,_incl._Biosynthesis_of_various_secondary_metabolites_-_part_3,_and_Putative_inner_membrane_exporter,_YdcZ

description:
  Mostly uncharacterized, incl. Biosynthesis of various secondary metabolites - part 3, and Putative inner membrane exporter, YdcZ


id: CL:3147
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3147_Mixed,_incl._Biosynthesis_of_various_secondary_metabolites_-_part_3,_and_Tetracycline_resistance_protein_TetA/multidrug_resistance_protein_MdtG

description:
  Mixed, incl. Biosynthesis of various secondary metabolites - part 3, and Tetracycline resistance protein TetA/multidrug resistance protein MdtG


id: CL:3148
description: Mixed, incl. Biosynthesis of various secondary metabolites - part 3, and LytTr DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3148_Mixed,_incl._Biosynthesis_of_various_secondary_metabolites_-_part_3,_and_LytTr_DNA-binding_domain


id: CL:3151
description: Biosynthesis of various secondary metabolites - part 3
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3151_Biosynthesis_of_various_secondary_metabolites_-_part_3


id: CL:3164
description: Mixed, incl. LytTr DNA-binding domain, and Protein of unknown function DUF3021
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3164_Mixed,_incl._LytTr_DNA-binding_domain,_and_Protein_of_unknown_function_DUF3021


id: CL:3177
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3177_Mixed,_incl._Tetracycline_resistance_protein_TetA/multidrug_resistance_protein_MdtG,_and_Domain_of_unknown_function_DUF1232

description:
  Mixed, incl. Tetracycline resistance protein TetA/multidrug resistance protein MdtG, and Domain of unknown function DUF1232


id: CL:3179
description: Mixed, incl. Domain of unknown function DUF1232, and DinB superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3179_Mixed,_incl._Domain_of_unknown_function_DUF1232,_and_DinB_superfamily


id: CL:3182
description: Mixed, incl. DinB superfamily, and Siderophore-dependent iron import into cell
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3182_Mixed,_incl._DinB_superfamily,_and_Siderophore-dependent_iron_import_into_cell


id: CL:3210
description: Mostly uncharacterized, incl. Putative inner membrane exporter, YdcZ, and DinB-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3210_Mostly_uncharacterized,_incl._Putative_inner_membrane_exporter,_YdcZ,_and_DinB-like_domain


id: CL:3212
description: Mixed, incl. DinB-like domain, and Regulation of proteolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3212_Mixed,_incl._DinB-like_domain,_and_Regulation_of_proteolysis


id: CL:3215
description: Mixed, incl. DinB-like domain, and Regulation of proteolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3215_Mixed,_incl._DinB-like_domain,_and_Regulation_of_proteolysis


id: CL:3247
description: Mixed, incl. Nitronate monooxygenase, and Negative regulation of sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3247_Mixed,_incl._Nitronate_monooxygenase,_and_Negative_regulation_of_sporulation


id: CL:325
description: glycyl-tRNA aminoacylation, and histidine-tRNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:325_glycyl-tRNA_aminoacylation,_and_histidine-tRNA_ligase_activity


id: CL:3267
description: Mixed, incl. Oxidoreductase Oye-like, and ArgE/DapE/ACY1/CPG2/YscS, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3267_Mixed,_incl._Oxidoreductase_Oye-like,_and_ArgE/DapE/ACY1/CPG2/YscS,_conserved_site


id: CL:3283
description: Mixed, incl. Nitroreductase, and L-glutamate import
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3283_Mixed,_incl._Nitroreductase,_and_L-glutamate_import


id: CL:3296
description: Mostly uncharacterized, incl. Peptidyl-serine acetylation, and Polyamine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3296_Mostly_uncharacterized,_incl._Peptidyl-serine_acetylation,_and_Polyamine_biosynthesis


id: CL:3297
description: Mostly uncharacterized, incl. Arginine and proline metabolism, and CBS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3297_Mostly_uncharacterized,_incl._Arginine_and_proline_metabolism,_and_CBS_domain


id: CL:3298
description: Mostly uncharacterized, incl. DinB-like domain, and Sterol-sensing domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3298_Mostly_uncharacterized,_incl._DinB-like_domain,_and_Sterol-sensing_domain


id: CL:3300
description: Mostly uncharacterized, incl. Potassium channel activity, and Cyclic nucleotide-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3300_Mostly_uncharacterized,_incl._Potassium_channel_activity,_and_Cyclic_nucleotide-binding_domain


id: CL:3301
description: Mixed, incl. Potassium channel activity, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3301_Mixed,_incl._Potassium_channel_activity,_and_Acetyltransferase_(GNAT)_domain


id: CL:3314
description: Mixed, incl. Cyclic nucleotide-binding domain, and Two-component system
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3314_Mixed,_incl._Cyclic_nucleotide-binding_domain,_and_Two-component_system


id: CL:3335
description: Mixed, incl. Polyamine biosynthesis, and PspA/IM30
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3335_Mixed,_incl._Polyamine_biosynthesis,_and_PspA/IM30


id: CL:3337
description: Mixed, incl. PspA/IM30, and Protein of unknown function DUF350
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3337_Mixed,_incl._PspA/IM30,_and_Protein_of_unknown_function_DUF350


id: CL:334
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and Acetamidase/Formamidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:334_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_Acetamidase/Formamidase


id: CL:3355
description: Mixed, incl. Pantothenate metabolic process, and Actin
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3355_Mixed,_incl._Pantothenate_metabolic_process,_and_Actin


id: CL:3365
description: Mostly uncharacterized, incl. Uncharacterised protein family UPF0478, and Coenzyme F420 binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3365_Mostly_uncharacterized,_incl._Uncharacterised_protein_family_UPF0478,_and_Coenzyme_F420_binding


id: CL:3366
description: Mixed, incl. Uncharacterised protein family UPF0478, and Coenzyme F420 binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3366_Mixed,_incl._Uncharacterised_protein_family_UPF0478,_and_Coenzyme_F420_binding


id: CL:3368
description: Mixed, incl. Coenzyme F420 binding, and Protein of unknown function DUF2188
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3368_Mixed,_incl._Coenzyme_F420_binding,_and_Protein_of_unknown_function_DUF2188


id: CL:3370
description: Mixed, incl. NAD(P)-binding domain, and Coenzyme F420 binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3370_Mixed,_incl._NAD(P)-binding_domain,_and_Coenzyme_F420_binding


id: CL:3401
description: Uncharacterised protein family UPF0478, and Exonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3401_Uncharacterised_protein_family_UPF0478,_and_Exonuclease_activity


id: CL:3411
description: Mostly uncharacterized, incl. Cobalamin binding, and ArsC family
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3411_Mostly_uncharacterized,_incl._Cobalamin_binding,_and_ArsC_family


id: CL:3412
description: Mixed, incl. Cobalamin binding, and ArsC family
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3412_Mixed,_incl._Cobalamin_binding,_and_ArsC_family


id: CL:3414
description: Cobalamin binding, and Heme catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3414_Cobalamin_binding,_and_Heme_catabolic_process


id: CL:3428
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3428_Mixed,_incl._5-Nucleotidase/apyrase,_and_Hedgehog_signalling/DD-peptidase_zinc-binding_domain_superfamily

description:
  Mixed, incl. 5-Nucleotidase/apyrase, and Hedgehog signalling/DD-peptidase zinc-binding domain superfamily


id: CL:3437
description: Mixed, incl. Sterol-sensing domain, and Uracil-DNA glycosylase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3437_Mixed,_incl._Sterol-sensing_domain,_and_Uracil-DNA_glycosylase-like


id: CL:3451
description: Mixed, incl. Acriflavin resistance protein, and Calcium
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3451_Mixed,_incl._Acriflavin_resistance_protein,_and_Calcium


id: CL:3454
description: Acriflavin resistance protein, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3454_Acriflavin_resistance_protein,_and_Signal


id: CL:3472
description: Mixed, incl. Quorum sensing, and Sequence-specific DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3472_Mixed,_incl._Quorum_sensing,_and_Sequence-specific_DNA_binding


id: CL:3473
description: Mostly uncharacterized, incl. DNA binding HTH domain, AraC-type, and Bacterial PH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3473_Mostly_uncharacterized,_incl._DNA_binding_HTH_domain,_AraC-type,_and_Bacterial_PH_domain


id: CL:3474
description: Mixed, incl. DNA binding HTH domain, AraC-type, and Nucleotidyltransferase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3474_Mixed,_incl._DNA_binding_HTH_domain,_AraC-type,_and_Nucleotidyltransferase_superfamily


id: CL:3475
description: Mostly uncharacterized, incl. Gas transport, and Transcription regulator Rrf2
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3475_Mostly_uncharacterized,_incl._Gas_transport,_and_Transcription_regulator_Rrf2


id: CL:3476
description: Mixed, incl. Gas transport, and Transcription regulator Rrf2
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3476_Mixed,_incl._Gas_transport,_and_Transcription_regulator_Rrf2


id: CL:348
description: Mixed, incl. 50S ribosome-binding GTPase, and Ribosome assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:348_Mixed,_incl._50S_ribosome-binding_GTPase,_and_Ribosome_assembly


id: CL:3487
description: Mixed, incl. RDD family, and PUA-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3487_Mixed,_incl._RDD_family,_and_PUA-like_superfamily


id: CL:3498
description: Mixed, incl. DNA binding HTH domain, AraC-type, and Cupin 2, conserved barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3498_Mixed,_incl._DNA_binding_HTH_domain,_AraC-type,_and_Cupin_2,_conserved_barrel


id: CL:3500
description: DNA binding HTH domain, AraC-type, and Sigma-70 region 3
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3500_DNA_binding_HTH_domain,_AraC-type,_and_Sigma-70_region_3


id: CL:351
description: Mixed, incl. Annealing activity, and RNA 2-O ribose methyltransferase substrate binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:351_Mixed,_incl._Annealing_activity,_and_RNA_2-O_ribose_methyltransferase_substrate_binding


id: CL:3519
description: Bacterial PH domain, and RNA pseudouridylate synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3519_Bacterial_PH_domain,_and_RNA_pseudouridylate_synthase


id: CL:3534
description: Mixed, incl. beta-Lactam resistance, and Cupin 2, conserved barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3534_Mixed,_incl._beta-Lactam_resistance,_and_Cupin_2,_conserved_barrel


id: CL:3535
description: Mostly uncharacterized, incl. Cupin 2, conserved barrel, and Cytosine deaminase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3535_Mostly_uncharacterized,_incl._Cupin_2,_conserved_barrel,_and_Cytosine_deaminase_activity


id: CL:3536
description: Mixed, incl. Fusaric acid resistance protein family, and NodB homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3536_Mixed,_incl._Fusaric_acid_resistance_protein_family,_and_NodB_homology_domain


id: CL:3549
description: Mixed, incl. Cupin 2, conserved barrel, and Cytosine deaminase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3549_Mixed,_incl._Cupin_2,_conserved_barrel,_and_Cytosine_deaminase_activity


id: CL:3558
description: beta-Lactam resistance, and tRNA synthetases class I (W and Y)
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3558_beta-Lactam_resistance,_and_tRNA_synthetases_class_I_(W_and_Y)


id: CL:3579
description: Mixed, incl. Oxidoreductase activity, and Transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3579_Mixed,_incl._Oxidoreductase_activity,_and_Transmembrane_transport


id: CL:3580
description: Mixed, incl. Short-chain dehydrogenase/reductase SDR, and Cellular catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3580_Mixed,_incl._Short-chain_dehydrogenase/reductase_SDR,_and_Cellular_catabolic_process


id: CL:3581
description: Mixed, incl. Short-chain dehydrogenase/reductase SDR, and Degradation of aromatic compounds
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3581_Mixed,_incl._Short-chain_dehydrogenase/reductase_SDR,_and_Degradation_of_aromatic_compounds


id: CL:3582
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3582_Mixed,_incl._Short-chain_dehydrogenase/reductase_SDR,_and_Alcohol_dehydrogenase,_zinc-type,_conserved_site

description:
  Mixed, incl. Short-chain dehydrogenase/reductase SDR, and Alcohol dehydrogenase, zinc-type, conserved site


id: CL:3583
description: Mixed, incl. Short-chain dehydrogenase/reductase SDR, and Protein of unknown function DUF1659
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3583_Mixed,_incl._Short-chain_dehydrogenase/reductase_SDR,_and_Protein_of_unknown_function_DUF1659


id: CL:3584
description: Mixed, incl. Short-chain dehydrogenase/reductase SDR, and DeoR C-terminal sensor domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3584_Mixed,_incl._Short-chain_dehydrogenase/reductase_SDR,_and_DeoR_C-terminal_sensor_domain


id: CL:3586
description: Mixed, incl. Short-chain dehydrogenase/reductase SDR, and DeoR C-terminal sensor domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3586_Mixed,_incl._Short-chain_dehydrogenase/reductase_SDR,_and_DeoR_C-terminal_sensor_domain


id: CL:3588
description: Short-chain dehydrogenase/reductase SDR
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3588_Short-chain_dehydrogenase/reductase_SDR


id: CL:3612
description: Mixed, incl. Diol metabolic process, and SinI-like, DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3612_Mixed,_incl._Diol_metabolic_process,_and_SinI-like,_DNA-binding_domain


id: CL:3622
description: Mixed, incl. Protein of unknown function DUF1659, and Transcription regulator PadR, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3622_Mixed,_incl._Protein_of_unknown_function_DUF1659,_and_Transcription_regulator_PadR,_N-terminal


id: CL:3641
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3641_Mixed,_incl._Chloroalkane_and_chloroalkene_degradation,_and_Aldehyde_dehydrogenase,_cysteine_active_site

description:
  Mixed, incl. Chloroalkane and chloroalkene degradation, and Aldehyde dehydrogenase, cysteine active site


id: CL:3643
description: Mixed, incl. Naphthalene degradation, and Chlorocyclohexane and chlorobenzene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3643_Mixed,_incl._Naphthalene_degradation,_and_Chlorocyclohexane_and_chlorobenzene_degradation


id: CL:3655
description: Mixed, incl. Transmembrane helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3655_Mixed,_incl._Transmembrane_helix


id: CL:3669
description: Mixed, incl. Glyoxalase/fosfomycin resistance/dioxygenase domain, and Putative esterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3669_Mixed,_incl._Glyoxalase/fosfomycin_resistance/dioxygenase_domain,_and_Putative_esterase


id: CL:3671
description: Glyoxalase/fosfomycin resistance/dioxygenase domain, and Putative esterase
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3671_Glyoxalase/fosfomycin_resistance/dioxygenase_domain,_and_Putative_esterase


id: CL:368
description: Ribosome assembly, and NAD biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:368_Ribosome_assembly,_and_NAD_biosynthetic_process


id: CL:3686
description: Mixed, incl. Transcription regulator PadR, N-terminal, and ABC transporter-like, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3686_Mixed,_incl._Transcription_regulator_PadR,_N-terminal,_and_ABC_transporter-like,_conserved_site


id: CL:3700
description: Mixed, incl. Type 1 protein exporter, and Major facilitator superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3700_Mixed,_incl._Type_1_protein_exporter,_and_Major_facilitator_superfamily


id: CL:3701
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3701_Mostly_uncharacterized,_incl._Sugar_transporter,_conserved_site,_and_Luciferase_family_oxidoreductase,_group_1

description:
  Mostly uncharacterized, incl. Sugar transporter, conserved site, and Luciferase family oxidoreductase, group 1


id: CL:3703
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3703_Mixed,_incl._Luciferase_family_oxidoreductase,_group_1,_and_Transcriptional_regulator_PadR-like_family

description:
  Mixed, incl. Luciferase family oxidoreductase, group 1, and Transcriptional regulator PadR-like family


id: CL:3719
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3719_Mixed,_incl._Sugar_transporter,_conserved_site,_and_C4-dicarboxylate_transmembrane_transporter_activity

description:
  Mixed, incl. Sugar transporter, conserved site, and C4-dicarboxylate transmembrane transporter activity


id: CL:3729
description: Mixed, incl. Type 1 protein exporter, and Mechanosensitive ion channel YbiO
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3729_Mixed,_incl._Type_1_protein_exporter,_and_Mechanosensitive_ion_channel_YbiO


id: CL:3731
description: Type 1 protein exporter, and Cytochrome complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3731_Type_1_protein_exporter,_and_Cytochrome_complex


id: CL:3753
description: Mostly uncharacterized, incl. Ectoine metabolic process, and Aldehyde dehydrogenase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3753_Mostly_uncharacterized,_incl._Ectoine_metabolic_process,_and_Aldehyde_dehydrogenase_domain


id: CL:3754
description: Mixed, incl. Arginine and proline metabolism, and Sodium/solute symporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3754_Mixed,_incl._Arginine_and_proline_metabolism,_and_Sodium/solute_symporter


id: CL:3755
description: Mixed, incl. Sodium/solute symporter, and Arginine and proline metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3755_Mixed,_incl._Sodium/solute_symporter,_and_Arginine_and_proline_metabolism


id: CL:3756
description: Mixed, incl. Arginine and proline metabolism, and Nucleotidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3756_Mixed,_incl._Arginine_and_proline_metabolism,_and_Nucleotidase_activity


id: CL:3758
description: Proline metabolic process, and Sodium/solute symporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3758_Proline_metabolic_process,_and_Sodium/solute_symporter


id: CL:3780
description: Mixed, incl. Metalloexopeptidase activity, and Nucleoside transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3780_Mixed,_incl._Metalloexopeptidase_activity,_and_Nucleoside_transport


id: CL:379
description: Mixed, incl. Protein carrier chaperone, and RNA (guanine-N7)-methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:379_Mixed,_incl._Protein_carrier_chaperone,_and_RNA_(guanine-N7)-methylation


id: CL:3796
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3796_Mixed,_incl._Cyclophilin-like_domain_superfamily,_and_NADH:flavin_oxidoreductase_/_NADH_oxidase_family

description:
  Mixed, incl. Cyclophilin-like domain superfamily, and NADH:flavin oxidoreductase / NADH oxidase family


id: CL:3813
description: Mixed, incl. Ectoine metabolic process, and Cobalt ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3813_Mixed,_incl._Ectoine_metabolic_process,_and_Cobalt_ion_transport


id: CL:3827
description: Mixed, incl. Cobalt ion transport, and Acyl-CoA reductase (LuxC)
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3827_Mixed,_incl._Cobalt_ion_transport,_and_Acyl-CoA_reductase_(LuxC)


id: CL:3837
description: Mixed, incl. DegV, and DhaL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3837_Mixed,_incl._DegV,_and_DhaL_domain


id: CL:3840
description: Uncharacterised protein, DegV family COG1307, and DhaL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3840_Uncharacterised_protein,_DegV_family_COG1307,_and_DhaL_domain


id: CL:3863
description: Mixed, incl. Exopeptidase activity, and NIL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3863_Mixed,_incl._Exopeptidase_activity,_and_NIL_domain


id: CL:3864
description: Mixed, incl. Exopeptidase activity, and NIL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3864_Mixed,_incl._Exopeptidase_activity,_and_NIL_domain


id: CL:3865
description: Mixed, incl. NIL domain, and NlpA lipoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3865_Mixed,_incl._NIL_domain,_and_NlpA_lipoprotein


id: CL:3867
description: NIL domain, and NlpA lipoprotein
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3867_NIL_domain,_and_NlpA_lipoprotein


id: CL:3884
description: Mixed, incl. Transglutaminase-like, and Cold shock, CspA
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3884_Mixed,_incl._Transglutaminase-like,_and_Cold_shock,_CspA


id: CL:3898
description: Mixed, incl. Peptidase M42, and Inosine triphosphate pyrophosphatase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3898_Mixed,_incl._Peptidase_M42,_and_Inosine_triphosphate_pyrophosphatase-like


id: CL:3911
description: Mixed, incl. Transglutaminase-like, and X-Pro dipeptidyl-peptidase (S15 family)
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3911_Mixed,_incl._Transglutaminase-like,_and_X-Pro_dipeptidyl-peptidase_(S15_family)


id: CL:392
description: Mixed, incl. RF-1 domain, and Protein-tyrosine phosphatase, low molecular weight
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:392_Mixed,_incl._RF-1_domain,_and_Protein-tyrosine_phosphatase,_low_molecular_weight


id: CL:3920
description: Mostly uncharacterized, incl. Carotenoid biosynthesis, and Amine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3920_Mostly_uncharacterized,_incl._Carotenoid_biosynthesis,_and_Amine_catabolic_process


id: CL:3921
description: Mostly uncharacterized, incl. Carotenoid biosynthesis, and Amine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3921_Mostly_uncharacterized,_incl._Carotenoid_biosynthesis,_and_Amine_catabolic_process


id: CL:3922
description: Mostly uncharacterized, incl. Carotenoid biosynthesis, and Amine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3922_Mostly_uncharacterized,_incl._Carotenoid_biosynthesis,_and_Amine_catabolic_process


id: CL:3923
description: Mixed, incl. Carotenoid biosynthesis, and Amine catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3923_Mixed,_incl._Carotenoid_biosynthesis,_and_Amine_catabolic_process


id: CL:3925
description: Mixed, incl. Carotenoid biosynthesis, and Phosphate acyltransferases
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3925_Mixed,_incl._Carotenoid_biosynthesis,_and_Phosphate_acyltransferases


id: CL:3927
description: Mixed, incl. Phosphate acyltransferases, and Carotenoid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3927_Mixed,_incl._Phosphate_acyltransferases,_and_Carotenoid_biosynthesis


id: CL:3942
description: Mixed, incl. Putative zinc-finger, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3942_Mixed,_incl._Putative_zinc-finger,_and_Sigma-70,_region_4


id: CL:3958
description: Mixed, incl. Amine catabolic process, and ABC-type polyamine transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3958_Mixed,_incl._Amine_catabolic_process,_and_ABC-type_polyamine_transporter_activity


id: CL:3961
description: ABC-type polyamine transporter activity, and CDP-alcohol phosphatidyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3961_ABC-type_polyamine_transporter_activity,_and_CDP-alcohol_phosphatidyltransferase


id: CL:3982
description: Mixed, incl. Zinc ion transport, and Sodium/calcium exchanger protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3982_Mixed,_incl._Zinc_ion_transport,_and_Sodium/calcium_exchanger_protein


id: CL:3993
description: Mostly uncharacterized, incl. Uncharacterized protein conserved in bacteria (DUF2334), and Antiport
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3993_Mostly_uncharacterized,_incl._Uncharacterized_protein_conserved_in_bacteria_(DUF2334),_and_Antiport


id: CL:3997
description: Mixed, incl. Uncharacterized protein conserved in bacteria (DUF2334), and Cell aggregation
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:3997_Mixed,_incl._Uncharacterized_protein_conserved_in_bacteria_(DUF2334),_and_Cell_aggregation


id: CL:401
description: Mixed, incl. Ribonucleoside-diphosphate reductase complex, and Nucleotide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:401_Mixed,_incl._Ribonucleoside-diphosphate_reductase_complex,_and_Nucleotide_biosynthesis


id: CL:4016
description: Mixed, incl. ABC1 atypical kinase-like domain, and Methyltransferase domain 25
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4016_Mixed,_incl._ABC1_atypical_kinase-like_domain,_and_Methyltransferase_domain_25


id: CL:4018
description: Mixed, incl. ABC1 atypical kinase-like domain, and Protein of unknown function DUF488
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4018_Mixed,_incl._ABC1_atypical_kinase-like_domain,_and_Protein_of_unknown_function_DUF488


id: CL:403
description: Ribonucleoside-diphosphate reductase complex, and AMP salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:403_Ribonucleoside-diphosphate_reductase_complex,_and_AMP_salvage


id: CL:4038
description: Mixed, incl. Heparin binding, and ABC1 atypical kinase-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4038_Mixed,_incl._Heparin_binding,_and_ABC1_atypical_kinase-like_domain


id: CL:4056
description: Antiporter activity, and Cation transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4056_Antiporter_activity,_and_Cation_transporter


id: CL:4057
description: Potassium ion transport, and Sodium/calcium exchanger protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4057_Potassium_ion_transport,_and_Sodium/calcium_exchanger_protein


id: CL:4058
description: Cation/H+ exchanger, and Sodium/calcium exchanger protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4058_Cation/H+_exchanger,_and_Sodium/calcium_exchanger_protein


id: CL:4069
description: Cation transporter, and Regulator of K+ conductance, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4069_Cation_transporter,_and_Regulator_of_K+_conductance,_N-terminal


id: CL:4079
description: Proton-conducting membrane transporter, and Antiporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4079_Proton-conducting_membrane_transporter,_and_Antiporter_activity


id: CL:4097
description: Mixed, incl. Iron ion homeostasis, and Phosphate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4097_Mixed,_incl._Iron_ion_homeostasis,_and_Phosphate_ion_transport


id: CL:4099
description: Iron ion homeostasis, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4099_Iron_ion_homeostasis,_and_Periplasmic_binding_protein


id: CL:4102
description: Iron coordination entity transport, and Iron ion homeostasis
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4102_Iron_coordination_entity_transport,_and_Iron_ion_homeostasis


id: CL:4123
description: ABC transporter, permease protein, BtuC-like, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4123_ABC_transporter,_permease_protein,_BtuC-like,_and_Periplasmic_binding_protein


id: CL:4133
description: Mixed, incl. Phosphate ion transport, and Glycerophospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4133_Mixed,_incl._Phosphate_ion_transport,_and_Glycerophospholipid_metabolism


id: CL:415
description: dTTP biosynthetic process, and Folic acid-containing compound biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:415_dTTP_biosynthetic_process,_and_Folic_acid-containing_compound_biosynthetic_process


id: CL:4151
description: Mixed, incl. Lipase activity, and Phosphoric diester hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4151_Mixed,_incl._Lipase_activity,_and_Phosphoric_diester_hydrolase_activity


id: CL:4166
description: Mixed, incl. Polysaccharide biosynthetic process, and Amino sugar and nucleotide sugar metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4166_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Amino_sugar_and_nucleotide_sugar_metabolism


id: CL:4167
description: Mixed, incl. Polysaccharide biosynthetic process, and Glycosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4167_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Glycosyltransferase_activity


id: CL:4169
description: Mixed, incl. Polysaccharide biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4169_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:4170
description: Mixed, incl. Polysaccharide biosynthetic process, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4170_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:4171
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4171_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Glycosyltransferase_subfamily_4-like,_N-terminal_domain

description:
  Mixed, incl. Polysaccharide biosynthetic process, and Glycosyltransferase subfamily 4-like, N-terminal domain


id: CL:4172
description: Polysaccharide biosynthetic process, and Glycosyltransferase subfamily 4-like, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4172_Polysaccharide_biosynthetic_process,_and_Glycosyltransferase_subfamily_4-like,_N-terminal_domain


id: CL:4173
description: Polysaccharide biosynthetic process, and UDP-glucose 4-epimerase
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4173_Polysaccharide_biosynthetic_process,_and_UDP-glucose_4-epimerase


id: CL:4175
description: Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4175_Polysaccharide_biosynthetic_process


id: CL:4176
description: Mixed, incl. Peptidyl-tyrosine modification, and Protein phosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4176_Mixed,_incl._Peptidyl-tyrosine_modification,_and_Protein_phosphatase


id: CL:4189
description: Peptidyl-tyrosine modification, and Bacterial sugar transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4189_Peptidyl-tyrosine_modification,_and_Bacterial_sugar_transferase


id: CL:4200
description: O-Antigen nucleotide sugar biosynthesis, and Dolichol-linked oligosaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4200_O-Antigen_nucleotide_sugar_biosynthesis,_and_Dolichol-linked_oligosaccharide_biosynthetic_process


id: CL:4220
description: Glycosyltransferase subfamily 4-like, N-terminal domain, and Acyltransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4220_Glycosyltransferase_subfamily_4-like,_N-terminal_domain,_and_Acyltransferase_family


id: CL:4229
description: Mixed, incl. Asparagine synthase, and Glycosyltransferase like family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4229_Mixed,_incl._Asparagine_synthase,_and_Glycosyltransferase_like_family_2


id: CL:4238
description: Mixed, incl. Teichoic acid metabolic process, and UDP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4238_Mixed,_incl._Teichoic_acid_metabolic_process,_and_UDP_binding_domain


id: CL:4253
description: Mixed, incl. Rhomboid family, and Polysaccharide biosynthesis protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4253_Mixed,_incl._Rhomboid_family,_and_Polysaccharide_biosynthesis_protein


id: CL:426
description: DNA topoisomerase, type IIA-like domain superfamily, and NAD-dependent epimerase/dehydratase
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:426_DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_NAD-dependent_epimerase/dehydratase


id: CL:4266
description: Mixed, incl. Glycoside hydrolase/deacetylase, beta/alpha-barrel, and CAP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4266_Mixed,_incl._Glycoside_hydrolase/deacetylase,_beta/alpha-barrel,_and_CAP_domain


id: CL:4268
description: Mixed, incl. NodB homology domain, and Diguanylate cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4268_Mixed,_incl._NodB_homology_domain,_and_Diguanylate_cyclase_activity


id: CL:4286
description: Mixed, incl. CAP domain, and Peptidase S8, subtilisin, Asp-active site
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4286_Mixed,_incl._CAP_domain,_and_Peptidase_S8,_subtilisin,_Asp-active_site


id: CL:4306
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4306_Mixed,_incl._Response_to_virus,_and_Binding-protein-dependent_transport_system_inner_membrane_component

description:
  Mixed, incl. Response to virus, and Binding-protein-dependent transport system inner membrane component


id: CL:4307
description: Mixed, incl. Binding-protein-dependent transport system inner membrane component, and SIS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4307_Mixed,_incl._Binding-protein-dependent_transport_system_inner_membrane_component,_and_SIS_domain


id: CL:4308
description: Mixed, incl. Binding-protein-dependent transport system inner membrane component, and SIS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4308_Mixed,_incl._Binding-protein-dependent_transport_system_inner_membrane_component,_and_SIS_domain


id: CL:4309
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4309_Mixed,_incl._ABC-type_maltose_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein

description:
  Mixed, incl. ABC-type maltose transporter activity, and Bacterial extracellular solute-binding protein


id: CL:4310
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4310_Mixed,_incl._ABC-type_maltose_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein

description:
  Mixed, incl. ABC-type maltose transporter activity, and Bacterial extracellular solute-binding protein


id: CL:4323
description: Mixed, incl. SIS domain, and ATPase, BadF/BadG/BcrA/BcrD type
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4323_Mixed,_incl._SIS_domain,_and_ATPase,_BadF/BadG/BcrA/BcrD_type


id: CL:4334
description: Mixed, incl. Glycoside hydrolase, family 3, N-terminal, and SIS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4334_Mixed,_incl._Glycoside_hydrolase,_family_3,_N-terminal,_and_SIS_domain


id: CL:4336
description: Mixed, incl. Glycoside hydrolase, family 3, N-terminal, and SIS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4336_Mixed,_incl._Glycoside_hydrolase,_family_3,_N-terminal,_and_SIS_domain


id: CL:4359
description: Gfo/Idh/MocA-like oxidoreductase, C-terminal, and Xylose isomerase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4359_Gfo/Idh/MocA-like_oxidoreductase,_C-terminal,_and_Xylose_isomerase-like_superfamily


id: CL:4374
description: Maintenance of DNA repeat elements, and Antiviral defense
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4374_Maintenance_of_DNA_repeat_elements,_and_Antiviral_defense


id: CL:438
description: Mixed, incl. Acid-ammonia (or amide) ligase activity, and Cys/Met metabolism PLP-dependent enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:438_Mixed,_incl._Acid-ammonia_(or_amide)_ligase_activity,_and_Cys/Met_metabolism_PLP-dependent_enzyme


id: CL:4389
description: Mixed, incl. Vacuole, and Gas vesicle protein GvpL/GvpF
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4389_Mixed,_incl._Vacuole,_and_Gas_vesicle_protein_GvpL/GvpF


id: CL:4391
description: Mixed, incl. Vacuole, and Gas vesicle protein GvpL/GvpF
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4391_Mixed,_incl._Vacuole,_and_Gas_vesicle_protein_GvpL/GvpF


id: CL:4394
description: Vacuole, and Gas vesicle protein GvpL/GvpF
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4394_Vacuole,_and_Gas_vesicle_protein_GvpL/GvpF


id: CL:4424
description: Mixed, incl. Two-component system, and Major facilitator superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4424_Mixed,_incl._Two-component_system,_and_Major_facilitator_superfamily


id: CL:4425
description: Mixed, incl. Two-component system, and Anion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4425_Mixed,_incl._Two-component_system,_and_Anion_transport


id: CL:4426
description: Mixed, incl. TRAP C4-dicarboxylate transport system permease DctM subunit, and Two-component system
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4426_Mixed,_incl._TRAP_C4-dicarboxylate_transport_system_permease_DctM_subunit,_and_Two-component_system


id: CL:4427
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4427_Mixed,_incl._TRAP_C4-dicarboxylate_transport_system_permease_DctM_subunit,_and_TRAP_transporter_solute_receptor_DctP

description:
  Mixed, incl. TRAP C4-dicarboxylate transport system permease DctM subunit, and TRAP transporter solute receptor DctP


id: CL:4428
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4428_Mixed,_incl._TRAP_transporter_solute_receptor_DctP,_and_TRAP_transporter_large_membrane_protein_DctM

description:
  Mixed, incl. TRAP transporter solute receptor DctP, and TRAP transporter large membrane protein DctM


id: CL:4430
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4430_Mixed,_incl._TRAP_transporter_solute_receptor_DctP,_and_TRAP_transporter_large_membrane_protein_DctM

description:
  Mixed, incl. TRAP transporter solute receptor DctP, and TRAP transporter large membrane protein DctM


id: CL:4447
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4447_Mixed,_incl._Short_chain_dehydrogenase,_and_TRAP_C4-dicarboxylate_transport_system_permease_DctM_subunit

description:
  Mixed, incl. Short chain dehydrogenase, and TRAP C4-dicarboxylate transport system permease DctM subunit


id: CL:4459
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4459_Mixed,_incl._Signal_transduction_response_regulator,_citrate/malate_metabolism,_and_Major_facilitator_superfamily

description:
  Mixed, incl. Signal transduction response regulator, citrate/malate metabolism, and Major facilitator superfamily


id: CL:4460
description: Mixed, incl. Arsenite transport, and Response to nutrient levels
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4460_Mixed,_incl._Arsenite_transport,_and_Response_to_nutrient_levels


id: CL:4469
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4469_Mixed,_incl._Signal_transduction_response_regulator,_citrate/malate_metabolism,_and_Signal_transduction_histidine_kinase-related_protein,_C-terminal

description:
  Mixed, incl. Signal transduction response regulator, citrate/malate metabolism, and Signal transduction histidine kinase-related protein, C-terminal


id: CL:4485
description: Mostly uncharacterized, incl. Putative fluoride ion transporter CrcB, and L-glutamate import
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4485_Mostly_uncharacterized,_incl._Putative_fluoride_ion_transporter_CrcB,_and_L-glutamate_import


id: CL:4486
description: Mixed, incl. Putative fluoride ion transporter CrcB, and Beta-eliminating lyase
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4486_Mixed,_incl._Putative_fluoride_ion_transporter_CrcB,_and_Beta-eliminating_lyase


id: CL:4487
description: Mixed, incl. Beta-eliminating lyase, and MerR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4487_Mixed,_incl._Beta-eliminating_lyase,_and_MerR-type_HTH_domain


id: CL:449
description: Mixed, incl. Phosphoribosyltransferase-like, and rRNA processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:449_Mixed,_incl._Phosphoribosyltransferase-like,_and_rRNA_processing


id: CL:4498
description: Putative fluoride ion transporter CrcB, and FAD-binding, type PCMH, subdomain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4498_Putative_fluoride_ion_transporter_CrcB,_and_FAD-binding,_type_PCMH,_subdomain_2


id: CL:450
description: Mostly uncharacterized, incl. UTP metabolic process, and UvrABC system, subunit B
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:450_Mostly_uncharacterized,_incl._UTP_metabolic_process,_and_UvrABC_system,_subunit_B


id: CL:4508
description: Mixed, incl. L-glutamate import, and Acyl transferase/acyl hydrolase/lysophospholipase
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4508_Mixed,_incl._L-glutamate_import,_and_Acyl_transferase/acyl_hydrolase/lysophospholipase


id: CL:4518
description: Mostly uncharacterized, incl. YdhG-like domain, and LytTr DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4518_Mostly_uncharacterized,_incl._YdhG-like_domain,_and_LytTr_DNA-binding_domain


id: CL:4519
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4519_Mixed,_incl._Sugar_transporter,_conserved_site,_and_DNA-binding_HTH_domain,_TetR-type,_conserved_site

description:
  Mixed, incl. Sugar transporter, conserved site, and DNA-binding HTH domain, TetR-type, conserved site


id: CL:452
description: Mixed, incl. UTP metabolic process, and UvrABC system, subunit B
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:452_Mixed,_incl._UTP_metabolic_process,_and_UvrABC_system,_subunit_B


id: CL:4530
description: Mixed, incl. YdhG-like domain, and LytTr DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4530_Mixed,_incl._YdhG-like_domain,_and_LytTr_DNA-binding_domain


id: CL:4539
description: Mixed, incl. Nucleoside recognition, and DNA modification
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4539_Mixed,_incl._Nucleoside_recognition,_and_DNA_modification


id: CL:4541
description: Mixed, incl. E-Z type HEAT repeats, and S-methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4541_Mixed,_incl._E-Z_type_HEAT_repeats,_and_S-methyltransferase_activity


id: CL:4558
description: Mixed, incl. Endonuclease III, and Na+-H+ antiporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4558_Mixed,_incl._Endonuclease_III,_and_Na+-H+_antiporter_family


id: CL:4572
description: Mixed, incl. Amino acid transport, and Metal-dependent hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4572_Mixed,_incl._Amino_acid_transport,_and_Metal-dependent_hydrolase


id: CL:4573
description: Mixed, incl. Glycine betaine transport, and ATP-binding cassette (ABC) transporter complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4573_Mixed,_incl._Glycine_betaine_transport,_and_ATP-binding_cassette_(ABC)_transporter_complex


id: CL:4574
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4574_Mostly_uncharacterized,_incl._Domain_of_unknown_function_DUF4162,_and_ABC-2_family_transporter_protein

description:
  Mostly uncharacterized, incl. Domain of unknown function DUF4162, and ABC-2 family transporter protein


id: CL:4576
description: Mixed, incl. Domain of unknown function DUF4162, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4576_Mixed,_incl._Domain_of_unknown_function_DUF4162,_and_ABC-2_family_transporter_protein


id: CL:4578
description: Mixed, incl. Protein of unknown function DUF2812, and Transcription regulator HTH, GntR
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4578_Mixed,_incl._Protein_of_unknown_function_DUF2812,_and_Transcription_regulator_HTH,_GntR


id: CL:4590
description: Domain of unknown function DUF4162, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4590_Domain_of_unknown_function_DUF4162,_and_ABC-2_family_transporter_protein


id: CL:4606
description: Mixed, incl. ABC-2 transporter, and Small Multidrug Resistance protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4606_Mixed,_incl._ABC-2_transporter,_and_Small_Multidrug_Resistance_protein


id: CL:4609
description: ABC-2 transporter, and Thiosulfate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4609_ABC-2_transporter,_and_Thiosulfate_transport


id: CL:462
description: Mixed, incl. Guanine phosphoribosyltransferase activity, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:462_Mixed,_incl._Guanine_phosphoribosyltransferase_activity,_and_Coenzyme_A_biosynthesis


id: CL:4625
description: Mixed, incl. ABC-2 family transporter protein, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4625_Mixed,_incl._ABC-2_family_transporter_protein,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:4638
description: Mixed, incl. Glycine betaine transport, and Acetate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4638_Mixed,_incl._Glycine_betaine_transport,_and_Acetate_metabolic_process


id: CL:4640
description: Mixed, incl. Acetate metabolic process, and Thioesterase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4640_Mixed,_incl._Acetate_metabolic_process,_and_Thioesterase-like_superfamily


id: CL:4650
description: Glycine betaine transport, and ABC-type glycine betaine transport system, substrate-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4650_Glycine_betaine_transport,_and_ABC-type_glycine_betaine_transport_system,_substrate-binding_domain


id: CL:4668
description: Mixed, incl. YtcJ like, and Peptidase M19
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4668_Mixed,_incl._YtcJ_like,_and_Peptidase_M19


id: CL:4669
description: Mixed, incl. Amino acid salvage, and Na+-H+ antiporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4669_Mixed,_incl._Amino_acid_salvage,_and_Na+-H+_antiporter_family


id: CL:4670
description: Mixed, incl. Amino acid salvage, and Na+-H+ antiporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4670_Mixed,_incl._Amino_acid_salvage,_and_Na+-H+_antiporter_family


id: CL:4679
description: Mixed, incl. Enolase C-terminal domain-like, and Protein of unknown function DUF819
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4679_Mixed,_incl._Enolase_C-terminal_domain-like,_and_Protein_of_unknown_function_DUF819


id: CL:4701
description: Mixed, incl. Iron-sulfur cluster assembly, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4701_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:4702
description: Mixed, incl. Iron-sulfur cluster assembly, and Cysteine desulfurase
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4702_Mixed,_incl._Iron-sulfur_cluster_assembly,_and_Cysteine_desulfurase


id: CL:4704
description: SUF system FeS cluster assembly, SufBD, and Cysteine desulfurase
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4704_SUF_system_FeS_cluster_assembly,_SufBD,_and_Cysteine_desulfurase


id: CL:471
description: Mixed, incl. Phosphoribosyltransferase-like, and Ribonuclease M5 activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:471_Mixed,_incl._Phosphoribosyltransferase-like,_and_Ribonuclease_M5_activity


id: CL:472
description: Mixed, incl. Ribonuclease M5 activity, and rRNA (adenine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:472_Mixed,_incl._Ribonuclease_M5_activity,_and_rRNA_(adenine)_methyltransferase_activity


id: CL:4721
description: Mixed, incl. S1 domain, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4721_Mixed,_incl._S1_domain,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:4732
description: Mixed, incl. DNA metabolic process, and Cro/C1-type helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4732_Mixed,_incl._DNA_metabolic_process,_and_Cro/C1-type_helix-turn-helix_domain


id: CL:4733
description: Mixed, incl. DNA binding, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4733_Mixed,_incl._DNA_binding,_and_Coiled_coil


id: CL:4734
description: Mixed, incl. DNA binding, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4734_Mixed,_incl._DNA_binding,_and_Coiled_coil


id: CL:4735
description: Mixed, incl. DNA binding, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4735_Mixed,_incl._DNA_binding,_and_Coiled_coil


id: CL:4736
description: Mostly uncharacterized, incl. Cro/C1-type helix-turn-helix domain, and DNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4736_Mostly_uncharacterized,_incl._Cro/C1-type_helix-turn-helix_domain,_and_DNA_metabolic_process


id: CL:4737
description: Mostly uncharacterized, incl. Cro/C1-type helix-turn-helix domain, and S-layer homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4737_Mostly_uncharacterized,_incl._Cro/C1-type_helix-turn-helix_domain,_and_S-layer_homology_domain


id: CL:4738
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4738_Mostly_uncharacterized,_incl._S-layer_homology_domain,_and_DNA_breaking-rejoining_enzyme,_catalytic_core

description:
  Mostly uncharacterized, incl. S-layer homology domain, and DNA breaking-rejoining enzyme, catalytic core


id: CL:4739
description: Mixed, incl. S-layer homology domain, and DNA breaking-rejoining enzyme, catalytic core
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4739_Mixed,_incl._S-layer_homology_domain,_and_DNA_breaking-rejoining_enzyme,_catalytic_core


id: CL:4740
description: Mixed, incl. DNA breaking-rejoining enzyme, catalytic core, and IrrE N-terminal-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4740_Mixed,_incl._DNA_breaking-rejoining_enzyme,_catalytic_core,_and_IrrE_N-terminal-like_domain


id: CL:4741
description: Mixed, incl. DNA breaking-rejoining enzyme, catalytic core, and IrrE N-terminal-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4741_Mixed,_incl._DNA_breaking-rejoining_enzyme,_catalytic_core,_and_IrrE_N-terminal-like_domain


id: CL:4743
description: Mixed, incl. IrrE N-terminal-like domain, and DUF218 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4743_Mixed,_incl._IrrE_N-terminal-like_domain,_and_DUF218_domain


id: CL:4747
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4747_Mixed,_incl._N-terminal_domain_of_anti-restriction_factor_ArdC,_and_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides

description:
  Mixed, incl. N-terminal domain of anti-restriction factor ArdC, and Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides


id: CL:4772
description: Mostly uncharacterized, incl. Arc-type ribbon-helix-helix, and Transglycosylase SLT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4772_Mostly_uncharacterized,_incl._Arc-type_ribbon-helix-helix,_and_Transglycosylase_SLT_domain


id: CL:4774
description: Mixed, incl. Transglycosylase SLT domain, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4774_Mixed,_incl._Transglycosylase_SLT_domain,_and_Coiled_coil


id: CL:4798
description: Mixed, incl. 3D domain, and Teichoic acid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4798_Mixed,_incl._3D_domain,_and_Teichoic_acid_biosynthesis


id: CL:481
description: Mixed, incl. Nucleotidyl transferase domain, and 5-phosphoribose 1-diphosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:481_Mixed,_incl._Nucleotidyl_transferase_domain,_and_5-phosphoribose_1-diphosphate_metabolic_process


id: CL:4829
description: Mixed, incl. Cro/C1-type helix-turn-helix domain, and Peptidoglycan-based cell wall
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4829_Mixed,_incl._Cro/C1-type_helix-turn-helix_domain,_and_Peptidoglycan-based_cell_wall


id: CL:4830
description: Mixed, incl. Helix-turn-helix XRE-family like proteins, and Peptidoglycan-based cell wall
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4830_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Peptidoglycan-based_cell_wall


id: CL:4841
description: Cro/C1-type helix-turn-helix domain, and DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4841_Cro/C1-type_helix-turn-helix_domain,_and_DNA_binding


id: CL:4850
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4850_Mostly_uncharacterized,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Biological_process_involved_in_interspecies_interaction_between_organisms

description:
  Mostly uncharacterized, incl. Helix-turn-helix XRE-family like proteins, and Biological process involved in interspecies interaction between organisms


id: CL:4852
description: Mostly uncharacterized, incl. Metallopeptidase activity, and DNA methylation on cytosine
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4852_Mostly_uncharacterized,_incl._Metallopeptidase_activity,_and_DNA_methylation_on_cytosine


id: CL:4853
description: Mostly uncharacterized, incl. Metallopeptidase activity, and DNA methylation on cytosine
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4853_Mostly_uncharacterized,_incl._Metallopeptidase_activity,_and_DNA_methylation_on_cytosine


id: CL:4855
description: Mostly uncharacterized, incl. Modulation of process of another organism
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4855_Mostly_uncharacterized,_incl._Modulation_of_process_of_another_organism


id: CL:4856
description: Mostly uncharacterized, incl. Modulation of process of another organism
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4856_Mostly_uncharacterized,_incl._Modulation_of_process_of_another_organism


id: CL:4883
description: Mostly uncharacterized, incl. Peptidase M23, and LysM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4883_Mostly_uncharacterized,_incl._Peptidase_M23,_and_LysM_domain


id: CL:4886
description: Mixed, incl. Peptidase M23, and LysM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4886_Mixed,_incl._Peptidase_M23,_and_LysM_domain


id: CL:4887
description: Mixed, incl. Peptidase M23, and LysM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4887_Mixed,_incl._Peptidase_M23,_and_LysM_domain


id: CL:4896
description: Mixed, incl. Translation initiation factor activity, and NADPH regeneration
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4896_Mixed,_incl._Translation_initiation_factor_activity,_and_NADPH_regeneration


id: CL:490
description: Mixed, incl. Response to oxidative stress, and Protein folding
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:490_Mixed,_incl._Response_to_oxidative_stress,_and_Protein_folding


id: CL:491
description: Mixed, incl. Response to oxidative stress, and Protein folding
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:491_Mixed,_incl._Response_to_oxidative_stress,_and_Protein_folding


id: CL:4912
description: Mixed, incl. Bacterial regulatory proteins, luxR family, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4912_Mixed,_incl._Bacterial_regulatory_proteins,_luxR_family,_and_Signal


id: CL:4929
description: Mixed, incl. Helix-turn-helix XRE-family like proteins, and DNA translocase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4929_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_DNA_translocase_activity


id: CL:493
description: Response to oxidative stress, and Thioredoxin domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:493_Response_to_oxidative_stress,_and_Thioredoxin_domain


id: CL:4930
description: Mixed, incl. DNA translocase activity, and AP2-like integrase, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4930_Mixed,_incl._DNA_translocase_activity,_and_AP2-like_integrase,_N-terminal_domain


id: CL:4939
description: Helix-turn-helix XRE-family like proteins, and DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4939_Helix-turn-helix_XRE-family_like_proteins,_and_DNA_binding


id: CL:4953
description: Mixed, incl. DNA modification, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4953_Mixed,_incl._DNA_modification,_and_DNA_integration


id: CL:4955
description: Mixed, incl. DNA modification, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4955_Mixed,_incl._DNA_modification,_and_DNA_integration


id: CL:4957
description: Mixed, incl. DNA restriction-modification system, and DNA integration
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4957_Mixed,_incl._DNA_restriction-modification_system,_and_DNA_integration


id: CL:4959
description: Mixed, incl. DNA restriction-modification system, and Topoisomerase C-terminal repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4959_Mixed,_incl._DNA_restriction-modification_system,_and_Topoisomerase_C-terminal_repeat


id: CL:4962
description: DNA restriction-modification system
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4962_DNA_restriction-modification_system


id: CL:4984
description: Mixed, incl. DNA methylase, and Restriction endodeoxyribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:4984_Mixed,_incl._DNA_methylase,_and_Restriction_endodeoxyribonuclease_activity


id: CL:50
description: Translation, and Nucleobase-containing compound biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:50_Translation,_and_Nucleobase-containing_compound_biosynthetic_process


id: CL:5006
description: Mixed, incl. Sigma-70, region 4, and Integrase, catalytic domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:5006_Mixed,_incl._Sigma-70,_region_4,_and_Integrase,_catalytic_domain


id: CL:5023
description: Mixed, incl. DNA strand exchange activity, and DNA methylase, adenine-specific
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:5023_Mixed,_incl._DNA_strand_exchange_activity,_and_DNA_methylase,_adenine-specific


id: CL:5036
description: Mixed, incl. EamA domain, and Resolvase, N terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:5036_Mixed,_incl._EamA_domain,_and_Resolvase,_N_terminal_domain


id: CL:5038
description: EamA domain, and Alpha/Beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:5038_EamA_domain,_and_Alpha/Beta_hydrolase_fold


id: CL:5057
description: Mixed, incl. YopX protein, and dUTPase
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:5057_Mixed,_incl._YopX_protein,_and_dUTPase


id: CL:5078
description: Mixed, incl. Transposase activity, and Regulation of growth
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:5078_Mixed,_incl._Transposase_activity,_and_Regulation_of_growth


id: CL:5079
description: Mixed, incl. Transposase activity, and ABC transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:5079_Mixed,_incl._Transposase_activity,_and_ABC_transporter


id: CL:5082
description: Transposase activity, and ABC transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:5082_Transposase_activity,_and_ABC_transporter


id: CL:5084
description: Mixed, incl. Transposase, IS116/IS110/IS902, and Transposition
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:5084_Mixed,_incl._Transposase,_IS116/IS110/IS902,_and_Transposition


id: CL:5120
description: Mixed, incl. Regulation of growth, and Endonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:5120_Mixed,_incl._Regulation_of_growth,_and_Endonuclease_activity


id: CL:5131
description: Mixed, incl. BCCT transporter family, and Cell death
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:5131_Mixed,_incl._BCCT_transporter_family,_and_Cell_death


id: CL:5132
description: Mixed, incl. Cell death, and Cytosolic acyl coenzyme A thioester hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:5132_Mixed,_incl._Cell_death,_and_Cytosolic_acyl_coenzyme_A_thioester_hydrolase


id: CL:5134
description: Cell death, and LysR, substrate-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:5134_Cell_death,_and_LysR,_substrate-binding


id: CL:5149
description: Mixed, incl. Cytosolic acyl coenzyme A thioester hydrolase, and LysR, substrate-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:5149_Mixed,_incl._Cytosolic_acyl_coenzyme_A_thioester_hydrolase,_and_LysR,_substrate-binding


id: CL:515
description: Response to superoxide, and Thioredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:515_Response_to_superoxide,_and_Thioredoxin


id: CL:5161
description: Mixed, incl. BCCT transporter family, and Zinc-ribbon domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:5161_Mixed,_incl._BCCT_transporter_family,_and_Zinc-ribbon_domain


id: CL:5183
description: Mixed, incl. Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:5183_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins


id: CL:52
description: Translation, and Nucleobase-containing compound biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:52_Translation,_and_Nucleobase-containing_compound_biosynthetic_process


id: CL:5201
description: Mixed, incl. Resolvase, HTH domain, and PGBD superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:5201_Mixed,_incl._Resolvase,_HTH_domain,_and_PGBD_superfamily


id: CL:53
description: Translation, and Nucleobase-containing compound biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:53_Translation,_and_Nucleobase-containing_compound_biosynthetic_process


id: CL:530
description: Protein folding, and Proteolysis involved in protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:530_Protein_folding,_and_Proteolysis_involved_in_protein_catabolic_process


id: CL:532
description: Protein folding chaperone, and Stress response
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:532_Protein_folding_chaperone,_and_Stress_response


id: CL:54
description: Translation, and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:54_Translation,_and_Ribosome_biogenesis


id: CL:55
description: Translation, and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:55_Translation,_and_Ribosome_biogenesis


id: CL:558
description: Mixed, incl. TPR repeat, and SNF2, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:558_Mixed,_incl._TPR_repeat,_and_SNF2,_N-terminal


id: CL:56
description: Translation, and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:56_Translation,_and_Ribosome_biogenesis


id: CL:560
description: Mixed, incl. TPR repeat, and Threonyl/alanyl tRNA synthetase, SAD
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:560_Mixed,_incl._TPR_repeat,_and_Threonyl/alanyl_tRNA_synthetase,_SAD


id: CL:57
description: Translation, and Proton-transporting ATP synthase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:57_Translation,_and_Proton-transporting_ATP_synthase_complex


id: CL:579
description: Mixed, incl. DNA replication, and DNA repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:579_Mixed,_incl._DNA_replication,_and_DNA_repair


id: CL:580
description: Mixed, incl. DNA replication, and DNA repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:580_Mixed,_incl._DNA_replication,_and_DNA_repair


id: CL:581
description: Mixed, incl. DNA replication, and DNA repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:581_Mixed,_incl._DNA_replication,_and_DNA_repair


id: CL:583
description: DNA replication, and Damaged DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:583_DNA_replication,_and_Damaged_DNA_binding


id: CL:585
description: DNA replication, and Damaged DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:585_DNA_replication,_and_Damaged_DNA_binding


id: CL:587
description: Mixed, incl. Nucleotide excision repair, and DNA damage sensor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:587_Mixed,_incl._Nucleotide_excision_repair,_and_DNA_damage_sensor_activity


id: CL:589
description: Mixed, incl. DNA damage sensor activity, and 5-3 exonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:589_Mixed,_incl._DNA_damage_sensor_activity,_and_5-3_exonuclease


id: CL:59
description: Ribosome, and Protein biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:59_Ribosome,_and_Protein_biosynthesis


id: CL:592
description: Mixed, incl. DNA damage sensor activity, and 5-3 exonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:592_Mixed,_incl._DNA_damage_sensor_activity,_and_5-3_exonuclease


id: CL:60
description: Ribosome, and Protein biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:60_Ribosome,_and_Protein_biosynthesis


id: CL:62
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:62_Ribosome,_and_Translation_regulator_activity


id: CL:63
description: Ribosome, and Bacterial secretion system
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:63_Ribosome,_and_Bacterial_secretion_system


id: CL:66
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:66_Ribosome,_and_Translation_regulator_activity


id: CL:665
description: DNA topoisomerase, type IIA-like domain superfamily, and Domain of unknown function (DUF370)
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:665_DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_Domain_of_unknown_function_(DUF370)


id: CL:67
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:67_Ribosome,_and_Translation_regulator_activity


id: CL:675
description: Holliday junction helicase complex, and Queuosine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:675_Holliday_junction_helicase_complex,_and_Queuosine_biosynthesis


id: CL:685
description: tRNA threonylcarbamoyladenosine modification, and Bacterial nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:685_tRNA_threonylcarbamoyladenosine_modification,_and_Bacterial_nucleoid


id: CL:699
description: FtsK domain, and ParB/Sulfiredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:699_FtsK_domain,_and_ParB/Sulfiredoxin


id: CL:70
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:70_Structural_constituent_of_ribosome


id: CL:715
description: Mixed, incl. rRNA modification, and Phosphotransferase activity, phosphate group as acceptor
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:715_Mixed,_incl._rRNA_modification,_and_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: CL:718
description: Mixed, incl. charged-tRNA amino acid modification, and Thiamine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:718_Mixed,_incl._charged-tRNA_amino_acid_modification,_and_Thiamine_metabolism


id: CL:720
description: Mixed, incl. charged-tRNA amino acid modification, and NusB family
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:720_Mixed,_incl._charged-tRNA_amino_acid_modification,_and_NusB_family


id: CL:73
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:73_Structural_constituent_of_ribosome


id: CL:748
description: Mixed, incl. Chromosome partition, and Chromosome condensation
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:748_Mixed,_incl._Chromosome_partition,_and_Chromosome_condensation


id: CL:764
description: Mixed, incl. Isoprene biosynthesis, and DNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:764_Mixed,_incl._Isoprene_biosynthesis,_and_DNA_catabolic_process


id: CL:765
description: Mixed, incl. Isoprene biosynthesis, and DNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:765_Mixed,_incl._Isoprene_biosynthesis,_and_DNA_catabolic_process


id: CL:767
description: Mixed, incl. DNA catabolic process, and NusB family
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:767_Mixed,_incl._DNA_catabolic_process,_and_NusB_family


id: CL:78
description: rRNA-binding, and Ribosomal protein L2, domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:78_rRNA-binding,_and_Ribosomal_protein_L2,_domain_2


id: CL:802
description: Mixed, incl. UVR domain, and Ribonuclease III family
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:802_Mixed,_incl._UVR_domain,_and_Ribonuclease_III_family


id: CL:805
description: Mixed, incl. UVR domain, and Subunit ChlI of Mg-chelatase
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:805_Mixed,_incl._UVR_domain,_and_Subunit_ChlI_of_Mg-chelatase


id: CL:818
description: Mixed, incl. Ribonuclease III family, and RNA 2-O ribose methyltransferase substrate binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:818_Mixed,_incl._Ribonuclease_III_family,_and_RNA_2-O_ribose_methyltransferase_substrate_binding


id: CL:82
description: rRNA-binding, and Elongation factor G C-terminus
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:82_rRNA-binding,_and_Elongation_factor_G_C-terminus


id: CL:827
description: Mixed, incl. Peptidoglycan biosynthesis, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:827_Mixed,_incl._Peptidoglycan_biosynthesis,_and_Cell_division


id: CL:828
description: Mixed, incl. Peptidoglycan biosynthesis, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:828_Mixed,_incl._Peptidoglycan_biosynthesis,_and_Cell_division_site


id: CL:829
description: Peptidoglycan biosynthesis, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:829_Peptidoglycan_biosynthesis,_and_Cell_division_site


id: CL:830
description: Peptidoglycan biosynthesis, and Cell division site
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:830_Peptidoglycan_biosynthesis,_and_Cell_division_site


id: CL:832
description: Aminoglycan biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:832_Aminoglycan_biosynthetic_process


id: CL:837
description: MurE/MurF, N-terminal, and Glycosyl transferase family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:837_MurE/MurF,_N-terminal,_and_Glycosyl_transferase_family_4


id: CL:86
description: Small ribosomal subunit, and rRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:86_Small_ribosomal_subunit,_and_rRNA-binding


id: CL:885
description: Mixed, incl. Thylakoid, and Alanine racemase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:885_Mixed,_incl._Thylakoid,_and_Alanine_racemase,_N-terminal


id: CL:900
description: Mixed, incl. Actin, and Metalloprotease
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:900_Mixed,_incl._Actin,_and_Metalloprotease


id: CL:911
description: Mixed, incl. NlpC/P60 family, and Peptidoglycan muralytic activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:911_Mixed,_incl._NlpC/P60_family,_and_Peptidoglycan_muralytic_activity


id: CL:932
description: Mixed, incl. NfeD-like, C-terminal domain, and Dephosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:932_Mixed,_incl._NfeD-like,_C-terminal_domain,_and_Dephosphorylation


id: CL:933
description: Mixed, incl. Dephosphorylation, and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:933_Mixed,_incl._Dephosphorylation,_and_Ribosome_biogenesis


id: CL:934
description: Mixed, incl. Ribosome biogenesis, and Undecaprenyl-diphosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:934_Mixed,_incl._Ribosome_biogenesis,_and_Undecaprenyl-diphosphatase_activity


id: CL:945
description: Mixed, incl. Response to nutrient, and tRNA (adenine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:945_Mixed,_incl._Response_to_nutrient,_and_tRNA_(adenine)_methyltransferase_activity


id: CL:954
description: Mixed, incl. NfeD-like, C-terminal domain, and Methyltransferase small domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:954_Mixed,_incl._NfeD-like,_C-terminal_domain,_and_Methyltransferase_small_domain


id: CL:967
description: Mixed, incl. RNA methyltransferase activity, and HDIG domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:967_Mixed,_incl._RNA_methyltransferase_activity,_and_HDIG_domain


id: CL:969
description: Mixed, incl. GIY-YIG endonuclease, and Tetrapyrrole methylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:969_Mixed,_incl._GIY-YIG_endonuclease,_and_Tetrapyrrole_methylase


id: CL:985
description: Met-10+ like-protein, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:985_Met-10+_like-protein,_and_Methyltransferase_domain


id: CL:994
description: Mixed, incl. DNA repair, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:994_Mixed,_incl._DNA_repair,_and_Coenzyme_A_biosynthesis


id: CL:995
description: Mixed, incl. DNA excision, and Glycoside metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:995_Mixed,_incl._DNA_excision,_and_Glycoside_metabolic_process


id: CL:996
description: Mixed, incl. DNA excision, and Glycoside metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:996_Mixed,_incl._DNA_excision,_and_Glycoside_metabolic_process


id: CL:997
description: DNA excision, and Glycoside metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1230341_STRINGid_CL:997_DNA_excision,_and_Glycoside_metabolic_process


id: GO:0000122
description: Negative regulation of transcription by RNA polymerase II
memo: https://amigo.geneontology.org/amigo/term/GO:0000122
golevel: 12
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0000122_Negative_regulation_of_transcription_by_RNA_polymerase_II


id: GO:0000701
description: Purine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0000701
golevel: 7
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0000701_Purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 10
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000724
description: Double-strand break repair via homologous recombination
memo: https://amigo.geneontology.org/amigo/term/GO:0000724
golevel: 9
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0000724_Double-strand_break_repair_via_homologous_recombination


id: GO:0000977
description: RNA polymerase II transcription regulatory region sequence-specific DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0000977
golevel: 8
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0000977_RNA_polymerase_II_transcription_regulatory_region_sequence-specific_DNA_binding


id: GO:0000981
description: DNA-binding transcription factor activity, RNA polymerase II-specific
memo: https://amigo.geneontology.org/amigo/term/GO:0000981
golevel: 3
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0000981_DNA-binding_transcription_factor_activity,_RNA_polymerase_II-specific


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0001227
description: DNA-binding transcription repressor activity, RNA polymerase II-specific
memo: https://amigo.geneontology.org/amigo/term/GO:0001227
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0001227_DNA-binding_transcription_repressor_activity,_RNA_polymerase_II-specific


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 6
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004081
description: bis(5-nucleosyl)-tetraphosphatase (asymmetrical) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004081
golevel: 7
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0004081_bis(5-nucleosyl)-tetraphosphatase_(asymmetrical)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
golevel: 6
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004318
description: Enoyl-[acyl-carrier-protein] reductase (NADH) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004318
golevel: 6
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0004318_Enoyl-[acyl-carrier-protein]_reductase_(NADH)_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004471
description: Malate dehydrogenase (decarboxylating) (NAD+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004471
golevel: 6
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0004471_Malate_dehydrogenase_(decarboxylating)_(NAD+)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 6
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004591
description: Oxoglutarate dehydrogenase (succinyl-transferring) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004591
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0004591_Oxoglutarate_dehydrogenase_(succinyl-transferring)_activity


id: GO:0004616
description: Phosphogluconate dehydrogenase (decarboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004616
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0004616_Phosphogluconate_dehydrogenase_(decarboxylating)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004648
description: O-phospho-L-serine:2-oxoglutarate aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004648
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0004648_O-phospho-L-serine:2-oxoglutarate_aminotransferase_activity


id: GO:0004715
description: Non-membrane spanning protein tyrosine kinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004715
golevel: 7
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0004715_Non-membrane_spanning_protein_tyrosine_kinase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0005315
description: Inorganic phosphate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005315
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0005315_Inorganic_phosphate_transmembrane_transporter_activity


id: GO:0005477
description: Pyruvate secondary active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005477
golevel: 7
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0005477_Pyruvate_secondary_active_transmembrane_transporter_activity


id: GO:0006490
description: Oligosaccharide-lipid intermediate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0006490
golevel: 5
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0006490_Oligosaccharide-lipid_intermediate_biosynthetic_process


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 11
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0007157
description: Heterophilic cell-cell adhesion via plasma membrane cell adhesion molecules
memo: https://amigo.geneontology.org/amigo/term/GO:0007157
golevel: 5
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0007157_Heterophilic_cell-cell_adhesion_via_plasma_membrane_cell_adhesion_molecules


id: GO:0008028
description: Monocarboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008028
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0008028_Monocarboxylic_acid_transmembrane_transporter_activity


id: GO:0008271
description: Secondary active sulfate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008271
golevel: 6
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0008271_Secondary_active_sulfate_transmembrane_transporter_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 7
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008686
description: 3,4-dihydroxy-2-butanone-4-phosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008686
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0008686_3,4-dihydroxy-2-butanone-4-phosphate_synthase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
golevel: 6
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008817
description: cob(I)yrinic acid a,c-diamide adenosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008817
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0008817_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0008965
description: Phosphoenolpyruvate-protein phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008965
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0008965_Phosphoenolpyruvate-protein_phosphotransferase_activity


id: GO:0008982
description: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008982
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0008982_protein-N(PI)-phosphohistidine-sugar_phosphotransferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 6
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 9
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 9
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009139
description: Pyrimidine nucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009139
golevel: 9
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0009139_Pyrimidine_nucleoside_diphosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 9
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009157
description: Deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009157
golevel: 9
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0009157_Deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 10
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009170
description: Purine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009170
golevel: 9
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0009170_Purine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009171
description: Purine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009171
golevel: 10
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0009171_Purine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 9
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 10
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 9
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 10
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 9
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 10
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 10
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 9
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 10
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009210
description: Pyrimidine ribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009210
golevel: 10
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0009210_Pyrimidine_ribonucleoside_triphosphate_catabolic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 9
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 10
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 10
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 9
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 10
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009330
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009330
golevel: 3
name:
  GOCC.STRING_v12.0_1230341_STRINGid_GO:0009330_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_complex


id: GO:0009401
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system
memo: https://amigo.geneontology.org/amigo/term/GO:0009401
golevel: 8
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0009401_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 6
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 6
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 6
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0010604
description: Positive regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010604
golevel: 5
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0010604_Positive_regulation_of_macromolecule_metabolic_process


id: GO:0010605
description: Negative regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010605
golevel: 5
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0010605_Negative_regulation_of_macromolecule_metabolic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
golevel: 3
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015355
description: Secondary active monocarboxylate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015355
golevel: 6
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0015355_Secondary_active_monocarboxylate_transmembrane_transporter_activity


id: GO:0015415
description: ATPase-coupled phosphate ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015415
golevel: 7
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0015415_ATPase-coupled_phosphate_ion_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015651
description: Quaternary ammonium group transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015651
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0015651_Quaternary_ammonium_group_transmembrane_transporter_activity


id: GO:0015658
description: Branched-chain amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015658
golevel: 6
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0015658_Branched-chain_amino_acid_transmembrane_transporter_activity


id: GO:0015932
description: Nucleobase-containing compound transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015932
golevel: 3
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0015932_Nucleobase-containing_compound_transmembrane_transporter_activity


id: GO:0015975
description: Energy derivation by oxidation of reduced inorganic compounds
memo: https://amigo.geneontology.org/amigo/term/GO:0015975
golevel: 4
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0015975_Energy_derivation_by_oxidation_of_reduced_inorganic_compounds


id: GO:0015988
description: Energy coupled proton transmembrane transport, against electrochemical gradient
memo: https://amigo.geneontology.org/amigo/term/GO:0015988
golevel: 8
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0015988_Energy_coupled_proton_transmembrane_transport,_against_electrochemical_gradient


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016624
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016624
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016624_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_disulfide_as_acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016642
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016642
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016642_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_disulfide_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016653
description: Oxidoreductase activity, acting on NAD(P)H, heme protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016653
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016653_Oxidoreductase_activity,_acting_on_NAD(P)H,_heme_protein_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016657
description: Oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016657
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016657_Oxidoreductase_activity,_acting_on_NAD(P)H,_nitrogenous_group_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016668
description: Oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016668
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016668_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_NAD(P)_as_acceptor


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016672
memo: https://amigo.geneontology.org/amigo/term/GO:0016672
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016672_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreductase activity, acting on a sulfur group of donors, quinone or similar compound as acceptor


id: GO:0016675
description: Oxidoreductase activity, acting on a heme group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016675
golevel: 3
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016675_Oxidoreductase_activity,_acting_on_a_heme_group_of_donors


id: GO:0016679
description: Oxidoreductase activity, acting on diphenols and related substances as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016679
golevel: 3
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016679_Oxidoreductase_activity,_acting_on_diphenols_and_related_substances_as_donors


id: GO:0016682
description: Oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016682
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016682_Oxidoreductase_activity,_acting_on_diphenols_and_related_substances_as_donors,_oxygen_as_acceptor


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016702
memo: https://amigo.geneontology.org/amigo/term/GO:0016702
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016702_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_two_atoms_of_oxygen

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen


id: GO:0016703
memo: https://amigo.geneontology.org/amigo/term/GO:0016703
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016703_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_one_atom_of_oxygen_(internal_monooxygenases_or_internal_mixed_function_oxidases)

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)


id: GO:0016705
memo: https://amigo.geneontology.org/amigo/term/GO:0016705
golevel: 3
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016705_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen


id: GO:0016708
memo: https://amigo.geneontology.org/amigo/term/GO:0016708
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016708_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_two_atoms_of_oxygen_into_one_donor

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor


id: GO:0016709
memo: https://amigo.geneontology.org/amigo/term/GO:0016709
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016709_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_NAD(P)H_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen


id: GO:0016712
memo: https://amigo.geneontology.org/amigo/term/GO:0016712
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016712_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_reduced_flavin_or_flavoprotein_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen


id: GO:0016716
memo: https://amigo.geneontology.org/amigo/term/GO:0016716
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016716_Oxidoreductase_activity,_acting_on_paired_donors,_with_incorporation_or_reduction_of_molecular_oxygen,_another_compound_as_one_donor,_and_incorporation_of_one_atom_of_oxygen

description:
  Oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen


id: GO:0016717
memo: https://amigo.geneontology.org/amigo/term/GO:0016717
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016717_Oxidoreductase_activity,_acting_on_paired_donors,_with_oxidation_of_a_pair_of_donors_resulting_in_the_reduction_of_molecular_oxygen_to_two_molecules_of_water

description:
  Oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water


id: GO:0016721
description: Oxidoreductase activity, acting on superoxide radicals as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016721
golevel: 3
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016721_Oxidoreductase_activity,_acting_on_superoxide_radicals_as_acceptor


id: GO:0016724
description: Oxidoreductase activity, acting on metal ions, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016724
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016724_Oxidoreductase_activity,_acting_on_metal_ions,_oxygen_as_acceptor


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016730
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016730
golevel: 3
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016730_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors


id: GO:0016731
description: Oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016731
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016731_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_NAD_or_NADP_as_acceptor


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016767
description: Geranylgeranyl-diphosphate geranylgeranyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016767
golevel: 6
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016767_Geranylgeranyl-diphosphate_geranylgeranyltransferase_activity


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016773
description: Phosphotransferase activity, alcohol group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016773
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016773_Phosphotransferase_activity,_alcohol_group_as_acceptor


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
golevel: 6
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016822
description: Hydrolase activity, acting on acid carbon-carbon bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016822
golevel: 3
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016822_Hydrolase_activity,_acting_on_acid_carbon-carbon_bonds


id: GO:0016823
description: Hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances
memo: https://amigo.geneontology.org/amigo/term/GO:0016823
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016823_Hydrolase_activity,_acting_on_acid_carbon-carbon_bonds,_in_ketonic_substances


id: GO:0016837
description: Carbon-oxygen lyase activity, acting on polysaccharides
memo: https://amigo.geneontology.org/amigo/term/GO:0016837
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016837_Carbon-oxygen_lyase_activity,_acting_on_polysaccharides


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016863
description: Intramolecular oxidoreductase activity, transposing C=C bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016863
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016863_Intramolecular_oxidoreductase_activity,_transposing_C=C_bonds


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016869
description: Intramolecular transferase activity, transferring amino groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016869
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016869_Intramolecular_transferase_activity,_transferring_amino_groups


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016888
description: Endodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016888
golevel: 7
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016888_Endodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016889
description: Endodeoxyribonuclease activity, producing 3-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016889
golevel: 7
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016889_Endodeoxyribonuclease_activity,_producing_3-phosphomonoesters


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 7
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
golevel: 6
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016894
memo: https://amigo.geneontology.org/amigo/term/GO:0016894
golevel: 6
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016894_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_3-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 7
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016896
description: Exoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016896
golevel: 7
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016896_Exoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016899
description: Oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016899
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016899_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_oxygen_as_acceptor


id: GO:0016901
memo: https://amigo.geneontology.org/amigo/term/GO:0016901
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016901_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_quinone_or_similar_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0019171
description: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019171
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0019171_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 5
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019243
description: Methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione
memo: https://amigo.geneontology.org/amigo/term/GO:0019243
golevel: 9
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0019243_Methylglyoxal_catabolic_process_to_D-lactate_via_S-lactoyl-glutathione


id: GO:0019288
description: Isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019288
golevel: 8
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0019288_Isopentenyl_diphosphate_biosynthetic_process,_methylerythritol_4-phosphate_pathway


id: GO:0019556
description: Histidine catabolic process to glutamate and formamide
memo: https://amigo.geneontology.org/amigo/term/GO:0019556
golevel: 10
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0019556_Histidine_catabolic_process_to_glutamate_and_formamide


id: GO:0019647
description: Formaldehyde assimilation via ribulose monophosphate cycle
memo: https://amigo.geneontology.org/amigo/term/GO:0019647
golevel: 6
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0019647_Formaldehyde_assimilation_via_ribulose_monophosphate_cycle


id: GO:0019829
description: ATPase-coupled cation transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019829
golevel: 6
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0019829_ATPase-coupled_cation_transmembrane_transporter_activity


id: GO:0022872
memo: https://amigo.geneontology.org/amigo/term/GO:0022872
golevel: 6
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0022872_protein-N(PI)-phosphohistidine-mannitol_phosphotransferase_system_transmembrane_transporter_activity

description:
  protein-N(PI)-phosphohistidine-mannitol phosphotransferase system transmembrane transporter activity


id: GO:0022877
description: protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0022877
golevel: 8
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0022877_protein-N(PI)-phosphohistidine-fructose_phosphotransferase_system_transporter_activity


id: GO:0030174
description: Regulation of DNA-templated DNA replication initiation
memo: https://amigo.geneontology.org/amigo/term/GO:0030174
golevel: 10
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0030174_Regulation_of_DNA-templated_DNA_replication_initiation


id: GO:0030435
description: Sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0030435
golevel: 3
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0030435_Sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0030604
description: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030604
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0030604_1-deoxy-D-xylulose-5-phosphate_reductoisomerase_activity


id: GO:0031235
description: Intrinsic component of the cytoplasmic side of the plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031235
name:
  GOCC.STRING_v12.0_1230341_STRINGid_GO:0031235_Intrinsic_component_of_the_cytoplasmic_side_of_the_plasma_membrane


id: GO:0031554
description: Regulation of DNA-templated transcription, termination
memo: https://amigo.geneontology.org/amigo/term/GO:0031554
golevel: 11
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0031554_Regulation_of_DNA-templated_transcription,_termination


id: GO:0032105
description: Negative regulation of response to extracellular stimulus
memo: https://amigo.geneontology.org/amigo/term/GO:0032105
golevel: 6
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0032105_Negative_regulation_of_response_to_extracellular_stimulus


id: GO:0032194
description: Ubiquinone biosynthetic process via 3,4-dihydroxy-5-polyprenylbenzoate
memo: https://amigo.geneontology.org/amigo/term/GO:0032194
golevel: 7
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0032194_Ubiquinone_biosynthetic_process_via_3,4-dihydroxy-5-polyprenylbenzoate


id: GO:0032297
description: Negative regulation of DNA-templated DNA replication initiation
memo: https://amigo.geneontology.org/amigo/term/GO:0032297
golevel: 11
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0032297_Negative_regulation_of_DNA-templated_DNA_replication_initiation


id: GO:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
golevel: 3
name:
  GOCC.STRING_v12.0_1230341_STRINGid_GO:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GO:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
golevel: 3
name:
  GOCC.STRING_v12.0_1230341_STRINGid_GO:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GO:0033283
description: ATPase-coupled organic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033283
golevel: 6
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0033283_ATPase-coupled_organic_acid_transmembrane_transporter_activity


id: GO:0033284
description: ATPase-coupled carboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033284
golevel: 7
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0033284_ATPase-coupled_carboxylic_acid_transmembrane_transporter_activity


id: GO:0033744
description: L-methionine:thioredoxin-disulfide S-oxidoreductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033744
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0033744_L-methionine:thioredoxin-disulfide_S-oxidoreductase_activity


id: GO:0033818
description: Beta-ketoacyl-acyl-carrier-protein synthase III activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033818
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0033818_Beta-ketoacyl-acyl-carrier-protein_synthase_III_activity


id: GO:0034023
description: 5-(carboxyamino)imidazole ribonucleotide mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034023
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0034023_5-(carboxyamino)imidazole_ribonucleotide_mutase_activity


id: GO:0034028
description: 5-(carboxyamino)imidazole ribonucleotide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034028
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0034028_5-(carboxyamino)imidazole_ribonucleotide_synthase_activity


id: GO:0034036
description: Purine ribonucleoside bisphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034036
golevel: 10
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0034036_Purine_ribonucleoside_bisphosphate_biosynthetic_process


id: GO:0034249
description: Negative regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034249
golevel: 6
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0034249_Negative_regulation_of_cellular_amide_metabolic_process


id: GO:0034250
description: Positive regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034250
golevel: 6
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0034250_Positive_regulation_of_cellular_amide_metabolic_process


id: GO:0034404
description: Nucleobase-containing small molecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034404
golevel: 6
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0034404_Nucleobase-containing_small_molecule_biosynthetic_process


id: GO:0034656
description: Nucleobase-containing small molecule catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034656
golevel: 6
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0034656_Nucleobase-containing_small_molecule_catabolic_process


id: GO:0035592
description: Establishment of protein localization to extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0035592
golevel: 6
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0035592_Establishment_of_protein_localization_to_extracellular_region


id: GO:0035998
description: 7,8-dihydroneopterin 3-triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0035998
golevel: 6
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0035998_7,8-dihydroneopterin_3-triphosphate_biosynthetic_process


id: GO:0036361
description: Racemase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0036361
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0036361_Racemase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0036380
description: UDP-N-acetylglucosamine-undecaprenyl-phosphate N-acetylglucosaminephosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0036380
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0036380_UDP-N-acetylglucosamine-undecaprenyl-phosphate_N-acetylglucosaminephosphotransferase_activity


id: GO:0036381
description: Pyridoxal 5-phosphate synthase (glutamine hydrolysing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0036381
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0036381_Pyridoxal_5-phosphate_synthase_(glutamine_hydrolysing)_activity


id: GO:0042083
description: 5,10-methylenetetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042083
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0042083_5,10-methylenetetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042173
description: Regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042173
golevel: 6
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0042173_Regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0042174
description: Negative regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042174
golevel: 7
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0042174_Negative_regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0042777
description: Proton motive force-driven plasma membrane ATP synthesis
memo: https://amigo.geneontology.org/amigo/term/GO:0042777
golevel: 13
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0042777_Proton_motive_force-driven_plasma_membrane_ATP_synthesis


id: GO:0043225
description: ATPase-coupled inorganic anion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043225
golevel: 6
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0043225_ATPase-coupled_inorganic_anion_transmembrane_transporter_activity


id: GO:0043242
description: Negative regulation of protein-containing complex disassembly
memo: https://amigo.geneontology.org/amigo/term/GO:0043242
golevel: 7
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0043242_Negative_regulation_of_protein-containing_complex_disassembly


id: GO:0043772
description: Acyl-phosphate glycerol-3-phosphate acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043772
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0043772_Acyl-phosphate_glycerol-3-phosphate_acyltransferase_activity


id: GO:0043811
description: Phosphate:acyl-[acyl carrier protein] acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043811
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0043811_Phosphate:acyl-[acyl_carrier_protein]_acyltransferase_activity


id: GO:0044011
description: Single-species biofilm formation on inanimate substrate
memo: https://amigo.geneontology.org/amigo/term/GO:0044011
golevel: 7
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0044011_Single-species_biofilm_formation_on_inanimate_substrate


id: GO:0044419
description: Biological process involved in interspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0044419
golevel: 1
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0044419_Biological_process_involved_in_interspecies_interaction_between_organisms


id: GO:0044769
description: ATPase activity, coupled to transmembrane movement of ions, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0044769
golevel: 7
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0044769_ATPase_activity,_coupled_to_transmembrane_movement_of_ions,_rotational_mechanism


id: GO:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
golevel: 6
name:
  GOCC.STRING_v12.0_1230341_STRINGid_GO:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GO:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
golevel: 6
name:
  GOCC.STRING_v12.0_1230341_STRINGid_GO:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GO:0045304
description: Regulation of establishment of competence for transformation
memo: https://amigo.geneontology.org/amigo/term/GO:0045304
golevel: 6
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0045304_Regulation_of_establishment_of_competence_for_transformation


id: GO:0045717
description: Negative regulation of fatty acid biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045717
golevel: 10
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0045717_Negative_regulation_of_fatty_acid_biosynthetic_process


id: GO:0045808
description: Negative regulation of establishment of competence for transformation
memo: https://amigo.geneontology.org/amigo/term/GO:0045808
golevel: 7
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0045808_Negative_regulation_of_establishment_of_competence_for_transformation


id: GO:0045881
description: Positive regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0045881
golevel: 7
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0045881_Positive_regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0045934
description: Negative regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045934
golevel: 6
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0045934_Negative_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0045935
description: Positive regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045935
golevel: 6
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0045935_Positive_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0045982
description: Negative regulation of purine nucleobase metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045982
golevel: 9
name:
  GOBP.STRING_v12.0_1230341_STRINGid_GO:0045982_Negative_regulation_of_purine_nucleobase_metabolic_process


id: GO:0046428
description: 1,4-dihydroxy-2-naphthoate octaprenyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046428
golevel: 6
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0046428_1,4-dihydroxy-2-naphthoate_octaprenyltransferase_activity


id: GO:0046429
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046429
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0046429_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_synthase_activity


id: GO:0046537
description: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046537
golevel: 6
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0046537_2,3-bisphosphoglycerate-independent_phosphoglycerate_mutase_activity


id: GO:0046912
description: Acyltransferase activity, acyl groups converted into alkyl on transfer
memo: https://amigo.geneontology.org/amigo/term/GO:0046912
golevel: 4
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0046912_Acyltransferase_activity,_acyl_groups_converted_into_alkyl_on_transfer


id: GO:0046915
description: Transition metal ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046915
golevel: 6
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0046915_Transition_metal_ion_transmembrane_transporter_activity


id: GO:0046933
description: Proton-transporting ATP synthase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046933
golevel: 8
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0046933_Proton-transporting_ATP_synthase_activity,_rotational_mechanism


id: GO:0046961
description: Proton-transporting ATPase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046961
golevel: 8
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0046961_Proton-transporting_ATPase_activity,_rotational_mechanism


id: GO:0047244
description: N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047244
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0047244_N-acetylglucosaminyldiphosphoundecaprenol_N-acetyl-beta-D-mannosaminyltransferase_activity


id: GO:0047324
description: Phosphoenolpyruvate-glycerone phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047324
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0047324_Phosphoenolpyruvate-glycerone_phosphotransferase_activity


id: GO:0047419
description: N-acetylgalactosamine-6-phosphate deacetylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047419
golevel: 5
name:
  GOMF.STRING_v12.0_1230341_STRINGid_GO:0047419_N-acetylgalactosamine-6-phosphate_deacetylase_activity


