# geneInfo

ensembl_gene_id: BN606_00001
symbol: CDC35657.1
gene_biotype: protein_coding
description:
  Oxidoreductase family NAD-binding Rossmann fold domain protein; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_00009
symbol: gyrA
gene_biotype: protein_coding
description:
  dNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: BN606_00010
symbol: gyrB
gene_biotype: protein_coding
description:
  dNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: BN606_00011
symbol: recF
gene_biotype: protein_coding
description:
  dNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: BN606_00013
symbol: CDC36120.1
gene_biotype: protein_coding
description:
  dNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of  [...]


ensembl_gene_id: BN606_00014
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: BN606_00015
symbol: rpmH
gene_biotype: protein_coding
description:
  50S ribosomal protein L34; Product inferred by homology to UniProt; Belongs to the bacterial ribosomal protein bL34 family.


ensembl_gene_id: BN606_00016
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: BN606_00017
symbol: CDC36124.1
gene_biotype: protein_coding
description:
  Putative membrane protein insertion efficiency factor; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: BN606_00020
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: BN606_00021
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: BN606_00022
symbol: rsmG
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: BN606_00033
symbol: CDC36598.1
gene_biotype: protein_coding
description:
  Putative uncharacterized protein; Product inferred by homology to UniProt; Belongs to the glycosyl hydrolase 2 family.


ensembl_gene_id: BN606_00054
symbol: CDC37636.1
gene_biotype: protein_coding
description:
  Sugar O-acyltransferase sialic acid O-acetyltransferase NeuD family; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_00058
symbol: CDC37647.1
gene_biotype: protein_coding
description:
  Putative uncharacterized protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: BN606_00061
symbol: CDC37654.1
gene_biotype: protein_coding
description:
  Putative flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: BN606_00063
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator homolog; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: BN606_00064
symbol: fliW
gene_biotype: protein_coding
description:
  Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.


ensembl_gene_id: BN606_00071
symbol: CDC38015.1
gene_biotype: protein_coding
description:
  23S rRNA (Uracil-5-)-methyltransferase RumA; Product inferred by homology to UniProt; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: BN606_00082
symbol: CDC38032.1
gene_biotype: protein_coding
description:
  Putative uncharacterized protein; Product inferred by homology to UniProt; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: BN606_00093
symbol: CDC38065.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier protein] reductase; Product inferred by homology to UniProt; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: BN606_00096
symbol: CDC38074.1
gene_biotype: protein_coding
description:
  Cation efflux family protein; Product inferred by homology to UniProt; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: BN606_00098
symbol: CDC38080.1
gene_biotype: protein_coding
description:
  aBC-type multidrug transport system ATPase and permease components; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_00100
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: BN606_00103
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: BN606_00105
symbol: CDC38097.1
gene_biotype: protein_coding
description:
  Cardiolipin synthetase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol; Belongs to the phospholipase D family. Cardiolipin synthase subfamily.


ensembl_gene_id: BN606_00107
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.


ensembl_gene_id: BN606_00114
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Product inferred by homology to UniProt; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: BN606_00125
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: BN606_00126
symbol: aspS
gene_biotype: protein_coding
description:
  aspartate--tRNA ligase 1; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: BN606_00127
symbol: CDC38899.1
gene_biotype: protein_coding
description:
  histidine--tRNA ligase; Product inferred by homology to UniProt; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: BN606_00131
symbol: CDC38903.1
gene_biotype: protein_coding
description:
  gTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: BN606_00133
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: BN606_00135
symbol: secF
gene_biotype: protein_coding
description:
  Putative uncharacterized protein; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily.


ensembl_gene_id: BN606_00141
symbol: CDC38913.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate-protein phosphotransferase; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: BN606_00144
symbol: CDC38918.1
gene_biotype: protein_coding
description:
  1-phosphofructokinase; Product inferred by homology to UniProt; Belongs to the carbohydrate kinase PfkB family. LacC subfamily.


ensembl_gene_id: BN606_00147
symbol: CDC39574.1
gene_biotype: protein_coding
description:
  aBC-type nitrate/sulfonate/taurine/bicarbonate transport system permease component; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_00154
symbol: CDC39584.1
gene_biotype: protein_coding
description:
  Maf-like protein BUTYVIB_01677; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: BN606_00164
symbol: CDC39903.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: BN606_00166
symbol: birA
gene_biotype: protein_coding
description:
  biotin-[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: BN606_00168
symbol: CDC39911.1
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: BN606_00169
symbol: greA-2
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: BN606_00170
symbol: lysS
gene_biotype: protein_coding
description:
  lysine--tRNA ligase; Product inferred by homology to UniProt; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: BN606_00175
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: BN606_00176
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A 1; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: BN606_00178
symbol: ecfA
gene_biotype: protein_coding
description:
  Cobalt import ATP-binding protein CbiO 1; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: BN606_00181
symbol: rpoA
gene_biotype: protein_coding
description:
  dNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: BN606_00182
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: BN606_00183
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: BN606_00184
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: BN606_00185
symbol: rpmJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L36; Product inferred by homology to UniProt; Belongs to the bacterial ribosomal protein bL36 family.


ensembl_gene_id: BN606_00186
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: BN606_00188
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: BN606_00189
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: BN606_00190
symbol: secY
gene_biotype: protein_coding
description:
  Protein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: BN606_00191
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: BN606_00193
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: BN606_00194
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: BN606_00195
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: BN606_00196
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: BN606_00197
symbol: rpsZ
gene_biotype: protein_coding
description:
  30S ribosomal protein S14 type Z; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: BN606_00198
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: BN606_00199
symbol: rplX
gene_biotype: protein_coding
description:
  50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: BN606_00200
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: BN606_00201
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: BN606_00202
symbol: rpmC
gene_biotype: protein_coding
description:
  50S ribosomal protein L29; Product inferred by homology to UniProt; Belongs to the universal ribosomal protein uL29 family.


ensembl_gene_id: BN606_00203
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: BN606_00204
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: BN606_00205
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: BN606_00206
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: BN606_00207
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: BN606_00208
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: BN606_00210
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: BN606_00211
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: BN606_00213
symbol: CDC40582.1
gene_biotype: protein_coding
description:
  aBC-type antimicrobial peptide transport system ATPase component; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_00231
symbol: CDC35681.1
gene_biotype: protein_coding
description:
  aBC-type amino acid transport/signal transduction systems periplasmic component/domain; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_00235
symbol: CDC35685.1
gene_biotype: protein_coding
description:
  Uncharacterized membrane protein (Homolog of Drosophila rhomboid); Product inferred by homology to UniProt.


ensembl_gene_id: BN606_00237
symbol: CDC35688.1
gene_biotype: protein_coding
description:
  Conserved hypothetical integral membrane protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: BN606_00240
symbol: CDC35696.1
gene_biotype: protein_coding
description:
  Two-component system PleD related family response regulator; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_00242
symbol: CDC35701.1
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase; Product inferred by homology to UniProt; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: BN606_00245
symbol: CDC35707.1
gene_biotype: protein_coding
description:
  Beta-xylosidase; Product inferred by homology to UniProt; Belongs to the glycosyl hydrolase 43 family.


ensembl_gene_id: BN606_00250
symbol: CDC35715.1
gene_biotype: protein_coding
description:
  Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain); Product inferred by homology to UniProt.


ensembl_gene_id: BN606_00251
symbol: CDC35716.1
gene_biotype: protein_coding
description:
  Methylenetetrahydrofolate reductase; Product inferred by homology to UniProt; Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: BN606_00252
symbol: CDC35717.1
gene_biotype: protein_coding
description:
  Putative 5-methyltetrahydrofolate--homocysteine methyltransferase; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_00261
symbol: truA-2
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A 2; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: BN606_00265
symbol: CDC35734.1
gene_biotype: protein_coding
description:
  Putative uncharacterized protein; Product inferred by homology to UniProt; Belongs to the Nudix hydrolase family.


ensembl_gene_id: BN606_00277
symbol: CDC35775.1
gene_biotype: protein_coding
description:
  Putative sodium/proline symporter; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: BN606_00282
symbol: CDC35785.1
gene_biotype: protein_coding
description:
  Calcium-transporting ATPase P-type HAD family subfamily IC; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_00299
symbol: CDC35820.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter ATP-binding protein; Product inferred by homology to UniProt; Belongs to the ABC transporter superfamily.


ensembl_gene_id: BN606_00306
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division ATP-binding protein FtsE; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: BN606_00307
symbol: CDC35833.1
gene_biotype: protein_coding
description:
  Putative cell division ABC transporter permease protein FtsX; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: BN606_00309
symbol: CDC35835.1
gene_biotype: protein_coding
description:
  Carboxyl-terminal processing protease; Product inferred by homology to UniProt; Belongs to the peptidase S41A family.


ensembl_gene_id: BN606_00310
symbol: uvrB
gene_biotype: protein_coding
description:
  uvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...]


ensembl_gene_id: BN606_00311
symbol: uvrA
gene_biotype: protein_coding
description:
  uvrABC system protein A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: BN606_00312
symbol: CDC35838.1
gene_biotype: protein_coding
description:
  Serine-type D-Ala-D-Ala carboxypeptidase; Product inferred by homology to UniProt; Belongs to the peptidase S11 family.


ensembl_gene_id: BN606_00316
symbol: CDC35842.1
gene_biotype: protein_coding
description:
  Putative uncharacterized protein; Tunnel subunit of the primary sodium pump glutaconyl-CoA decarboxylase (GCD).


ensembl_gene_id: BN606_00324
symbol: pyrG
gene_biotype: protein_coding
description:
  cTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: BN606_00327
symbol: hprK
gene_biotype: protein_coding
description:
  hPr kinase/phosphorylase; Catalyzes the ATP- as well as the pyrophosphate-dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK/P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P-Ser-HPr). The two antagonistic activities of HprK/P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon [...]


ensembl_gene_id: BN606_00331
symbol: whiA
gene_biotype: protein_coding
description:
  Putative sporulation transcription regulator WhiA; Involved in cell division and chromosome segregation.


ensembl_gene_id: BN606_00334
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase 2; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: BN606_00335
symbol: CDC35894.1
gene_biotype: protein_coding
description:
  rNA methyltransferase TrmH family; Product inferred by homology to UniProt; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: BN606_00341
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.


ensembl_gene_id: BN606_00343
symbol: CDC35920.1
gene_biotype: protein_coding
description:
  Transcriptional regulator LysR family; Product inferred by homology to UniProt; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: BN606_00345
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: BN606_00367
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: BN606_00372
symbol: CDC35971.1
gene_biotype: protein_coding
description:
  bAAT/acyl-CoA thioester hydrolase C-terminal domain protein; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_00379
symbol: CDC35996.1
gene_biotype: protein_coding
description:
  6-O-methylguanine DNA methyltransferase DNA binding domain protein; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_00382
symbol: thrS
gene_biotype: protein_coding
description:
  threonine--tRNA ligase; Product inferred by homology to UniProt; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: BN606_00385
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ 1; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: BN606_00387
symbol: CDC36012.1
gene_biotype: protein_coding
description:
  uDP-N-acetylglucosamine 1-carboxyvinyltransferase 2; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: BN606_00389
symbol: murD
gene_biotype: protein_coding
description:
  uDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: BN606_00393
symbol: rsmH
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase H; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: BN606_00399
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: BN606_00400
symbol: ychF
gene_biotype: protein_coding
description:
  gTP-binding protein YchF; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: BN606_00405
symbol: CDC36042.1
gene_biotype: protein_coding
description:
  Ribulose-phosphate 3-epimerase; Product inferred by homology to UniProt; Belongs to the ribulose-phosphate 3-epimerase family.


ensembl_gene_id: BN606_00406
symbol: rsgA
gene_biotype: protein_coding
description:
  Putative ribosome biogenesis GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: BN606_00409
symbol: rlmN
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: BN606_00410
symbol: CDC36054.1
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: BN606_00411
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: BN606_00412
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: BN606_00413
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: BN606_00414
symbol: murE
gene_biotype: protein_coding
description:
  uDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: BN606_00415
symbol: folD
gene_biotype: protein_coding
description:
  Bifunctional protein FolD; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: BN606_00416
symbol: murF
gene_biotype: protein_coding
description:
  uDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: BN606_00417
symbol: fhs
gene_biotype: protein_coding
description:
  Formate--tetrahydrofolate ligase; Product inferred by homology to UniProt; Belongs to the formate--tetrahydrofolate ligase family.


ensembl_gene_id: BN606_00419
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase 2; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: BN606_00423
symbol: CDC36079.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: BN606_00424
symbol: nnrE
gene_biotype: protein_coding
description:
  yjeF family protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...]


ensembl_gene_id: BN606_00426
symbol: rex
gene_biotype: protein_coding
description:
  Redox-sensing transcriptional repressor rex; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: BN606_00429
symbol: CDC36085.1
gene_biotype: protein_coding
description:
  Purine nucleoside phosphorylase I inosine and guanosine-specific; The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate.


ensembl_gene_id: BN606_00436
symbol: CDC36092.1
gene_biotype: protein_coding
description:
  Anaerobic ribonucleoside-triphosphate reductase-activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.


ensembl_gene_id: BN606_00437
symbol: CDC36093.1
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.


ensembl_gene_id: BN606_00448
symbol: CDC36194.1
gene_biotype: protein_coding
description:
  Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: BN606_00450
symbol: glgB
gene_biotype: protein_coding
description:
  1 4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: BN606_00455
symbol: rsmI
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: BN606_00464
symbol: recD2
gene_biotype: protein_coding
description:
  Helicase RecD/TraA family; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.


ensembl_gene_id: BN606_00465
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: BN606_00469
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Product inferred by homology to UniProt; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: BN606_00486
symbol: CDC36285.1
gene_biotype: protein_coding
description:
  High affinity branched-chain amino acid ABC transporter ATP-binding protein; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_00488
symbol: CDC36287.1
gene_biotype: protein_coding
description:
  High-affinity branched-chain amino acid transport system permeaseprotein BraE; Product inferred by homology to UniProt; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: BN606_00489
symbol: CDC36288.1
gene_biotype: protein_coding
description:
  High-affinity branched-chain amino acid ABC transporter permease protein LivH; Product inferred by homology to UniProt; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: BN606_00490
symbol: CDC36289.1
gene_biotype: protein_coding
description:
  Leucine-isoleucine-valine-threonine-and alanine-binding protein; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_00496
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: BN606_00497
symbol: rpsB
gene_biotype: protein_coding
description:
  30S ribosomal protein S2; Product inferred by homology to UniProt; Belongs to the universal ribosomal protein uS2 family.


ensembl_gene_id: BN606_00503
symbol: CDC36309.1
gene_biotype: protein_coding
description:
  Glycoside Hydrolase Family 13 candidate a-glycosidase (Amylase-related); Product inferred by homology to UniProt.


ensembl_gene_id: BN606_00508
symbol: glgB-2
gene_biotype: protein_coding
description:
  1 4-alpha-glucan branching enzyme GlgB 2; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: BN606_00510
symbol: CDC36316.1
gene_biotype: protein_coding
description:
  D-isomer specific 2-hydroxyacid dehydrogenase family protein; Product inferred by homology to UniProt; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: BN606_00511
symbol: serC
gene_biotype: protein_coding
description:
  Phosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.


ensembl_gene_id: BN606_00512
symbol: CDC36318.1
gene_biotype: protein_coding
description:
  Putative pyridoxal kinase; Product inferred by homology to UniProt; Belongs to the pyridoxine kinase family.


ensembl_gene_id: BN606_00517
symbol: ilvD
gene_biotype: protein_coding
description:
  Dihydroxy-acid dehydratase; Product inferred by homology to UniProt; Belongs to the IlvD/Edd family.


ensembl_gene_id: BN606_00518
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: BN606_00519
symbol: CDC36331.1
gene_biotype: protein_coding
description:
  Endoglucanase; Product inferred by homology to UniProt; Belongs to the glycosyl hydrolase 5 (cellulase A) family.


ensembl_gene_id: BN606_00521
symbol: sbcD
gene_biotype: protein_coding
description:
  Exonuclease SbcCD D subunit; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: BN606_00523
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: BN606_00524
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: BN606_00535
symbol: cobB
gene_biotype: protein_coding
description:
  nAD-dependent deacetylase; NAD-dependent protein deacetylase which modulates the activities of several enzymes which are inactive in their acetylated form; Belongs to the sirtuin family. Class U subfamily.


ensembl_gene_id: BN606_00537
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: BN606_00539
symbol: CDC36393.1
gene_biotype: protein_coding
description:
  Phospho-2-dehydro-3-deoxyheptonate aldolase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).


ensembl_gene_id: BN606_00541
symbol: CDC36397.1
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerC; Product inferred by homology to UniProt; Belongs to the 'phage' integrase family.


ensembl_gene_id: BN606_00544
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: BN606_00546
symbol: uppP-2
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase 1; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: BN606_00547
symbol: rpoZ
gene_biotype: protein_coding
description:
  dNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: BN606_00553
symbol: CDC36417.1
gene_biotype: protein_coding
description:
  Sporulation transcription factor Spo0A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.


ensembl_gene_id: BN606_00556
symbol: radA
gene_biotype: protein_coding
description:
  dNA repair protein radA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: BN606_00558
symbol: CDC36425.1
gene_biotype: protein_coding
description:
  Negative regulator of genetic competence ClpC/MecB; Product inferred by homology to UniProt; Belongs to the ClpA/ClpB family.


ensembl_gene_id: BN606_00565
symbol: purD
gene_biotype: protein_coding
description:
  Phosphoribosylamine--glycine ligase; Product inferred by homology to UniProt; Belongs to the GARS family.


ensembl_gene_id: BN606_00566
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: BN606_00568
symbol: purE
gene_biotype: protein_coding
description:
  N5-carboxyaminoimidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: BN606_00572
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: BN606_00574
symbol: pyrK
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase B (NAD(+)) electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).


ensembl_gene_id: BN606_00575
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; Product inferred by homology to UniProt; Belongs to the OMP decarboxylase family. Type 2 subfamily.


ensembl_gene_id: BN606_00576
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: BN606_00582
symbol: gmhA
gene_biotype: protein_coding
description:
  Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate; Belongs to the SIS family. GmhA subfamily.


ensembl_gene_id: BN606_00584
symbol: hldD
gene_biotype: protein_coding
description:
  aDP-glyceromanno-heptose 6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily.


ensembl_gene_id: BN606_00585
symbol: hldE
gene_biotype: protein_coding
description:
  Bifunctional protein HldE; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: BN606_00589
symbol: CDC36490.1
gene_biotype: protein_coding
description:
  Glycosyl transferase possibly involved in lipopolysaccharide synthesis; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_00592
symbol: CDC36498.1
gene_biotype: protein_coding
description:
  Putative uncharacterized protein; Product inferred by homology to UniProt; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: BN606_00593
symbol: CDC36500.1
gene_biotype: protein_coding
description:
  Putative cell envelope-related function transcriptional attenuator common domain protein; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_00610
symbol: CDC36525.1
gene_biotype: protein_coding
description:
  bstYI methyltransferase; Product inferred by homology to UniProt; Belongs to the N(4)/N(6)-methyltransferase family.


ensembl_gene_id: BN606_00622
symbol: CDC36545.1
gene_biotype: protein_coding
description:
  Thiamine pyrophosphate TPP-binding domain-containing protein; Product inferred by homology to UniProt; Belongs to the TPP enzyme family.


ensembl_gene_id: BN606_00624
symbol: CDC36547.1
gene_biotype: protein_coding
description:
  degT/DnrJ/EryC1/StrS aminotransferase; Product inferred by homology to UniProt; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: BN606_00639
symbol: dnaJ
gene_biotype: protein_coding
description:
  Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]


ensembl_gene_id: BN606_00641
symbol: grpE
gene_biotype: protein_coding
description:
  Protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...]


ensembl_gene_id: BN606_00642
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor hrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: BN606_00646
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: BN606_00647
symbol: rpmI
gene_biotype: protein_coding
description:
  50S ribosomal protein L35; Product inferred by homology to UniProt; Belongs to the bacterial ribosomal protein bL35 family.


ensembl_gene_id: BN606_00648
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: BN606_00652
symbol: CDC36610.1
gene_biotype: protein_coding
description:
  Succinylglutamate desuccinylase/aspartoacylase family protein; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_00655
symbol: CDC36618.1
gene_biotype: protein_coding
description:
  Glutamate dehydrogenase; Product inferred by homology to UniProt; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: BN606_00657
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: BN606_00670
symbol: CDC36652.1
gene_biotype: protein_coding
description:
  rNA polymerase sigma factor; Product inferred by homology to UniProt; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: BN606_00699
symbol: CDC36702.1
gene_biotype: protein_coding
description:
  N utilization substance protein B homolog; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: BN606_00700
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease 7 large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: BN606_00701
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease 7 small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: BN606_00702
symbol: CDC36708.1
gene_biotype: protein_coding
description:
  Geranyltranstransferase; Product inferred by homology to UniProt; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: BN606_00703
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: BN606_00705
symbol: nadK
gene_biotype: protein_coding
description:
  Probable inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: BN606_00718
symbol: CDC36801.1
gene_biotype: protein_coding
description:
  Protein-tyrosine-phosphatase; Product inferred by homology to UniProt; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: BN606_00719
symbol: leuS
gene_biotype: protein_coding
description:
  leucine--tRNA ligase; Product inferred by homology to UniProt; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: BN606_00723
symbol: CDC36812.1
gene_biotype: protein_coding
description:
  Isocitrate dehydrogenase [NADP]; Product inferred by homology to UniProt; Belongs to the isocitrate and isopropylmalate dehydrogenases family.


ensembl_gene_id: BN606_00729
symbol: CDC36823.1
gene_biotype: protein_coding
description:
  Peptidase S8 and S53 subtilisin kexin sedolisin; Product inferred by homology to UniProt; Belongs to the peptidase S8 family.


ensembl_gene_id: BN606_00734
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: BN606_00736
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: BN606_00737
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase 2; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: BN606_00738
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: BN606_00739
symbol: CDC36841.1
gene_biotype: protein_coding
description:
  Deoxyguanosinetriphosphate triphosphohydrolase-like protein; Product inferred by homology to UniProt; Belongs to the dGTPase family. Type 2 subfamily.


ensembl_gene_id: BN606_00740
symbol: dnaG
gene_biotype: protein_coding
description:
  dNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: BN606_00741
symbol: sigA
gene_biotype: protein_coding
description:
  rNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: BN606_00753
symbol: CDC36910.1
gene_biotype: protein_coding
description:
  rNA polymerase sigma factor; Product inferred by homology to UniProt; Belongs to the sigma-70 factor family.


ensembl_gene_id: BN606_00754
symbol: spoIIAB
gene_biotype: protein_coding
description:
  Anti-sigma F factor; Binds to sigma F and blocks its ability to form an RNA polymerase holoenzyme (E-sigma F). Phosphorylates SpoIIAA on a serine residue. This phosphorylation may enable SpoIIAA to act as an anti- anti-sigma factor that counteracts SpoIIAB and thus releases sigma F from inhibition.


ensembl_gene_id: BN606_00755
symbol: CDC36914.1
gene_biotype: protein_coding
description:
  Stage II sporulation protein; Product inferred by homology to UniProt; Belongs to the anti-sigma-factor antagonist family.


ensembl_gene_id: BN606_00756
symbol: CDC36916.1
gene_biotype: protein_coding
description:
  Putative tetratricopeptide repeat-containing domain protein; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_00758
symbol: CDC36919.1
gene_biotype: protein_coding
description:
  Folylpolyglutamate synthase/dihydrofolate synthase; Product inferred by homology to UniProt; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: BN606_00762
symbol: CDC36927.1
gene_biotype: protein_coding
description:
  Xylan 1 4-beta-xylosidase; Product inferred by homology to UniProt; Belongs to the glycosyl hydrolase 43 family.


ensembl_gene_id: BN606_00766
symbol: CDC36934.1
gene_biotype: protein_coding
description:
  Putative uncharacterized protein; Product inferred by homology to UniProt; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: BN606_00768
symbol: gltX
gene_biotype: protein_coding
description:
  glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).


ensembl_gene_id: BN606_00778
symbol: CDC36951.1
gene_biotype: protein_coding
description:
  fe2+/Zn2+ uptake regulation proteins; Product inferred by homology to UniProt; Belongs to the Fur family.


ensembl_gene_id: BN606_00783
symbol: CDC36960.1
gene_biotype: protein_coding
description:
  Pyruvate formate-lyase 1-activating enzyme; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.


ensembl_gene_id: BN606_00790
symbol: CDC36982.1
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Product inferred by homology to UniProt; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: BN606_00792
symbol: CDC36984.1
gene_biotype: protein_coding
description:
  rNA polymerase sigma-H factor; Product inferred by homology to UniProt; Belongs to the sigma-70 factor family.


ensembl_gene_id: BN606_00793
symbol: CDC36985.1
gene_biotype: protein_coding
description:
  rNA methyltransferase TrmH family group 3; Product inferred by homology to UniProt; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: BN606_00794
symbol: mrnC
gene_biotype: protein_coding
description:
  Mini-ribonuclease 3; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.


ensembl_gene_id: BN606_00795
symbol: cysS
gene_biotype: protein_coding
description:
  cysteine--tRNA ligase; Product inferred by homology to UniProt; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: BN606_00797
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2 4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: BN606_00804
symbol: CDC36996.1
gene_biotype: protein_coding
description:
  aTP-binding protein Mrp/Nbp35 family; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: BN606_00808
symbol: CDC37000.1
gene_biotype: protein_coding
description:
  Pullulanase type I; Product inferred by homology to UniProt; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: BN606_00820
symbol: CDC37038.1
gene_biotype: protein_coding
description:
  Phosphate transport system regulatory protein PhoU; Plays a role in the regulation of phosphate uptake.


ensembl_gene_id: BN606_00821
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein PhoT family (TC 3.A.1.7.1); Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: BN606_00823
symbol: CDC37047.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter permease protein PstC; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: BN606_00824
symbol: CDC37050.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter substrate-binding protein PhoT family (TC 3.A.1.7.1); Product inferred by homology to UniProt.


ensembl_gene_id: BN606_00830
symbol: CDC37061.1
gene_biotype: protein_coding
description:
  aBC-type cobalamin/Fe3+-siderophores transport systems ATPase components; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_00831
symbol: CDC37066.1
gene_biotype: protein_coding
description:
  Iron chelate uptake ABC transporter FeCT family permease protein; Product inferred by homology to UniProt; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: BN606_00832
symbol: CDC37068.1
gene_biotype: protein_coding
description:
  aBC-type Fe3+-hydroxamate transport system periplasmic component; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_00836
symbol: CDC37095.1
gene_biotype: protein_coding
description:
  Ferrous iron transporter FeoB; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: BN606_00840
symbol: CDC37109.1
gene_biotype: protein_coding
description:
  Transporter; Product inferred by homology to UniProt; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.


ensembl_gene_id: BN606_00841
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: BN606_00845
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate synthase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: BN606_00846
symbol: clpB
gene_biotype: protein_coding
description:
  aTP-dependent chaperone protein ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: BN606_00847
symbol: CDC37125.1
gene_biotype: protein_coding
description:
  Glycosyl hydrolase; Product inferred by homology to UniProt; Belongs to the glycosyl hydrolase 31 family.


ensembl_gene_id: BN606_00861
symbol: smpB
gene_biotype: protein_coding
description:
  ssrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: BN606_00862
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: BN606_00863
symbol: CDC37182.1
gene_biotype: protein_coding
description:
  Preprotein translocase; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: BN606_00865
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: BN606_00867
symbol: gpr
gene_biotype: protein_coding
description:
  Germination protease; Initiates the rapid degradation of small, acid-soluble proteins during spore germination; Belongs to the peptidase A25 family.


ensembl_gene_id: BN606_00878
symbol: argD
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase; Product inferred by homology to UniProt; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: BN606_00879
symbol: argB
gene_biotype: protein_coding
description:
  Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: BN606_00880
symbol: argJ
gene_biotype: protein_coding
description:
  Arginine biosynthesis bifunctional protein ArgJ; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: BN606_00881
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: BN606_00882
symbol: argG
gene_biotype: protein_coding
description:
  Argininosuccinate synthase; Product inferred by homology to UniProt; Belongs to the argininosuccinate synthase family. Type 1 subfamily.


ensembl_gene_id: BN606_00887
symbol: CDC37222.1
gene_biotype: protein_coding
description:
  rNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: BN606_00889
symbol: cheD
gene_biotype: protein_coding
description:
  Probable chemoreceptor glutamine deamidase CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: BN606_00893
symbol: cheB
gene_biotype: protein_coding
description:
  Chemotaxis response regulator protein-glutamate methylesterase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: BN606_00897
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: BN606_00898
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: BN606_00900
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: BN606_00901
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: BN606_00922
symbol: CDC37295.1
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgC; Product inferred by homology to UniProt; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: BN606_00923
symbol: CDC37297.1
gene_biotype: protein_coding
description:
  Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: BN606_00924
symbol: codY
gene_biotype: protein_coding
description:
  gTP-sensing transcriptional pleiotropic repressor CodY; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family.


ensembl_gene_id: BN606_00925
symbol: topA
gene_biotype: protein_coding
description:
  dNA topoisomerase; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA superc [...]


ensembl_gene_id: BN606_00929
symbol: CDC37312.1
gene_biotype: protein_coding
description:
  Putative prepilin-type N-cleavage/methylation domain protein; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_00944
symbol: CDC37365.1
gene_biotype: protein_coding
description:
  Cellulase (Glycosyl hydrolase family 5); Product inferred by homology to UniProt; Belongs to the glycosyl hydrolase 5 (cellulase A) family.


ensembl_gene_id: BN606_00948
symbol: CDC37369.1
gene_biotype: protein_coding
description:
  2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.


ensembl_gene_id: BN606_00965
symbol: CDC37399.1
gene_biotype: protein_coding
description:
  Sphingosine kinase and enzymes related to eukaryotic diacylglycerol kinase; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_00977
symbol: CDC37431.1
gene_biotype: protein_coding
description:
  Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-); Product inferred by homology to UniProt.


ensembl_gene_id: BN606_00983
symbol: CDC37447.1
gene_biotype: protein_coding
description:
  Phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: BN606_00989
symbol: CDC37464.1
gene_biotype: protein_coding
description:
  Zinc ABC transporter zinc-binding lipoprotein; Product inferred by homology to UniProt; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: BN606_00990
symbol: CDC37469.1
gene_biotype: protein_coding
description:
  Putative uncharacterized protein; Product inferred by homology to UniProt; Belongs to the Fur family.


ensembl_gene_id: BN606_00994
symbol: CDC37481.1
gene_biotype: protein_coding
description:
  Bacterial cell division membrane protein; Product inferred by homology to UniProt; Belongs to the SEDS family.


ensembl_gene_id: BN606_00996
symbol: CDC37487.1
gene_biotype: protein_coding
description:
  Putative uncharacterized protein; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: BN606_00997
symbol: CDC37489.1
gene_biotype: protein_coding
description:
  Sodium/glutamate symporter; Catalyzes the sodium-dependent transport of glutamate. Belongs to the glutamate:Na(+) symporter (ESS) (TC 2.A.27) family.


ensembl_gene_id: BN606_01002
symbol: CDC37499.1
gene_biotype: protein_coding
description:
  Aldehyde oxidase and xanthine dehydrogenase molybdopterin binding domain protein; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_01014
symbol: CDC37519.1
gene_biotype: protein_coding
description:
  uPF0178 protein CLOL250_01893; Product inferred by homology to UniProt; Belongs to the UPF0178 family.


ensembl_gene_id: BN606_01027
symbol: CDC37546.1
gene_biotype: protein_coding
description:
  tPR-repeat-containing protein Cell-adhesion domain protein; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_01042
symbol: CDC37710.1
gene_biotype: protein_coding
description:
  Putative cyclic diguanylate phosphodiesterase domain protein; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_01046
symbol: CDC37731.1
gene_biotype: protein_coding
description:
  Glutamine synthetase type I; Product inferred by homology to UniProt; Belongs to the glutamine synthetase family.


ensembl_gene_id: BN606_01048
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: BN606_01049
symbol: dapL
gene_biotype: protein_coding
description:
  lL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate.


ensembl_gene_id: BN606_01051
symbol: aspS-2
gene_biotype: protein_coding
description:
  aspartate--tRNA ligase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: BN606_01052
symbol: gatC
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: BN606_01053
symbol: gatA
gene_biotype: protein_coding
description:
  glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: BN606_01054
symbol: CDC37743.1
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_01056
symbol: purC
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole-succinocarboxamide synthase; Product inferred by homology to UniProt; Belongs to the SAICAR synthetase family.


ensembl_gene_id: BN606_01057
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: BN606_01058
symbol: CDC37754.1
gene_biotype: protein_coding
description:
  Adenylosuccinate lyase; Product inferred by homology to UniProt; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: BN606_01060
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: BN606_01065
symbol: CDC37772.1
gene_biotype: protein_coding
description:
  Putative uncharacterized protein; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family.


ensembl_gene_id: BN606_01067
symbol: era
gene_biotype: protein_coding
description:
  gTPase Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: BN606_01069
symbol: glyQS
gene_biotype: protein_coding
description:
  glycine--tRNA ligase; Catalyzes the attachment of glycine to tRNA(Gly). Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: BN606_01071
symbol: CDC37788.1
gene_biotype: protein_coding
description:
  Pyruvate phosphate dikinase; Product inferred by homology to UniProt; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: BN606_01078
symbol: phnW
gene_biotype: protein_coding
description:
  2-aminoethylphosphonate--pyruvate transaminase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily.


ensembl_gene_id: BN606_01087
symbol: CDC37837.1
gene_biotype: protein_coding
description:
  Two component system histidine kinase/response regulator hybrid protein; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_01089
symbol: queH
gene_biotype: protein_coding
description:
  dNA integration/recombination/invertion protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: BN606_01092
symbol: CDC37849.1
gene_biotype: protein_coding
description:
  ybaK/ebsC protein; Product inferred by homology to UniProt; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.


ensembl_gene_id: BN606_01109
symbol: CDC37946.1
gene_biotype: protein_coding
description:
  Indolepyruvate ferredoxin oxidoreductase alpha and beta subunits; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_01113
symbol: CDC37958.1
gene_biotype: protein_coding
description:
  Alpha-amylase; Product inferred by homology to UniProt; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: BN606_01117
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: BN606_01123
symbol: CDC37990.1
gene_biotype: protein_coding
description:
  1 4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position. Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: BN606_01127
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: BN606_01128
symbol: tsaD
gene_biotype: protein_coding
description:
  Probable tRNA threonylcarbamoyladenosine biosynthesis protein Gcp; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: BN606_01130
symbol: rnz
gene_biotype: protein_coding
description:
  Ribonuclease Z; Zinc phosphodiesterase, which displays some tRNA 3'- processing endonuclease activity. Probably involved in tRNA maturation, by removing a 3'-trailer from precursor tRNA; Belongs to the RNase Z family.


ensembl_gene_id: BN606_01132
symbol: CDC38201.1
gene_biotype: protein_coding
description:
  Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.


ensembl_gene_id: BN606_01140
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: BN606_01141
symbol: secA
gene_biotype: protein_coding
description:
  Protein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: BN606_01142
symbol: hpf
gene_biotype: protein_coding
description:
  Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: BN606_01143
symbol: CDC38237.1
gene_biotype: protein_coding
description:
  3-oxoacyl-(Acyl-carrier-protein) reductase; Product inferred by homology to UniProt; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: BN606_01145
symbol: CDC38251.1
gene_biotype: protein_coding
description:
  O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_01146
symbol: CDC38254.1
gene_biotype: protein_coding
description:
  Glycosyl hydrolase family 31; Product inferred by homology to UniProt; Belongs to the glycosyl hydrolase 31 family.


ensembl_gene_id: BN606_01147
symbol: CDC38256.1
gene_biotype: protein_coding
description:
  Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_01153
symbol: nth
gene_biotype: protein_coding
description:
  Predicted EndoIII-related endonuclease; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: BN606_01168
symbol: CDC38334.1
gene_biotype: protein_coding
description:
  cDP-glycerol:poly(Glycerophosphate) glycerophosphotransferase; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_01169
symbol: CDC38336.1
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 2; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_01177
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 2 subfamily.


ensembl_gene_id: BN606_01180
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: BN606_01184
symbol: CDC38367.1
gene_biotype: protein_coding
description:
  rNA polymerase sigma-70 factor ECF subfamily protein; Product inferred by homology to UniProt; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: BN606_01189
symbol: CDC38381.1
gene_biotype: protein_coding
description:
  Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_01199
symbol: CDC38404.1
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter permease protein PotC; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_01200
symbol: CDC38405.1
gene_biotype: protein_coding
description:
  aBC-type spermidine/putrescine transport system permease component I; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_01201
symbol: potA
gene_biotype: protein_coding
description:
  Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.


ensembl_gene_id: BN606_01202
symbol: murA
gene_biotype: protein_coding
description:
  uDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: BN606_01214
symbol: CDC38426.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter permease protein; Product inferred by homology to UniProt; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: BN606_01215
symbol: CDC38429.1
gene_biotype: protein_coding
description:
  Putative ABC transporter periplasmic substrate-binding protein; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_01223
symbol: CDC38448.1
gene_biotype: protein_coding
description:
  Putative 1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: BN606_01232
symbol: tuf
gene_biotype: protein_coding
description:
  Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: BN606_01233
symbol: fusA
gene_biotype: protein_coding
description:
  Elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 subfamily.


ensembl_gene_id: BN606_01234
symbol: rpsG
gene_biotype: protein_coding
description:
  30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: BN606_01235
symbol: rpsL
gene_biotype: protein_coding
description:
  30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: BN606_01237
symbol: rpoC
gene_biotype: protein_coding
description:
  dNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: BN606_01238
symbol: rpoB
gene_biotype: protein_coding
description:
  dNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: BN606_01239
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: BN606_01240
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: BN606_01241
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: BN606_01242
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: BN606_01243
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: BN606_01244
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: BN606_01245
symbol: rpmG
gene_biotype: protein_coding
description:
  50S ribosomal protein L33; Product inferred by homology to UniProt; Belongs to the bacterial ribosomal protein bL33 family.


ensembl_gene_id: BN606_01247
symbol: CDC38502.1
gene_biotype: protein_coding
description:
  rNA polymerase sigma-24 subunit ECF subfamily; Product inferred by homology to UniProt; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: BN606_01248
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: BN606_01249
symbol: prmC
gene_biotype: protein_coding
description:
  Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: BN606_01253
symbol: CDC38569.1
gene_biotype: protein_coding
description:
  Cellulose acetylase subunit WssH; Product inferred by homology to UniProt; Belongs to the membrane-bound acyltransferase family.


ensembl_gene_id: BN606_01257
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: BN606_01261
symbol: engB
gene_biotype: protein_coding
description:
  Probable GTP-binding protein EngB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: BN606_01262
symbol: lon
gene_biotype: protein_coding
description:
  Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: BN606_01263
symbol: clpX
gene_biotype: protein_coding
description:
  aTP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: BN606_01264
symbol: clpP
gene_biotype: protein_coding
description:
  aTP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: BN606_01265
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: BN606_01272
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: BN606_01273
symbol: groL
gene_biotype: protein_coding
description:
  60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: BN606_01274
symbol: groS
gene_biotype: protein_coding
description:
  10 kDa chaperonin; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: BN606_01281
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: BN606_01287
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: BN606_01295
symbol: CDC38699.1
gene_biotype: protein_coding
description:
  Putative biosurfactants production protein; Product inferred by homology to UniProt; Belongs to the P-Pant transferase superfamily.


ensembl_gene_id: BN606_01298
symbol: carB
gene_biotype: protein_coding
description:
  Carbamoyl-phosphate synthase large chain; Product inferred by homology to UniProt; Belongs to the CarB family.


ensembl_gene_id: BN606_01299
symbol: carA
gene_biotype: protein_coding
description:
  Carbamoyl-phosphate synthase small chain; Product inferred by homology to UniProt; Belongs to the CarA family.


ensembl_gene_id: BN606_01308
symbol: CDC38739.1
gene_biotype: protein_coding
description:
  Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: BN606_01309
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: BN606_01310
symbol: hflX
gene_biotype: protein_coding
description:
  gTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: BN606_01312
symbol: CDC38749.1
gene_biotype: protein_coding
description:
  Putative metal ion ABC transporter membrane-spanning subunit; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_01319
symbol: CDC38761.1
gene_biotype: protein_coding
description:
  Putative alginate biosynthesis protein AlgI; Product inferred by homology to UniProt; Belongs to the membrane-bound acyltransferase family.


ensembl_gene_id: BN606_01321
symbol: CDC38765.1
gene_biotype: protein_coding
description:
  Putative pyridoxal-dependent decarboxylase C-sheet domain protein; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_01322
symbol: CDC38766.1
gene_biotype: protein_coding
description:
  Amino acid adenylation domain protein; Product inferred by homology to UniProt; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: BN606_01334
symbol: CDC38782.1
gene_biotype: protein_coding
description:
  Putative uncharacterized protein; Product inferred by homology to UniProt; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: BN606_01340
symbol: hslO
gene_biotype: protein_coding
description:
  33 kDa chaperonin; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: BN606_01347
symbol: cas2
gene_biotype: protein_coding
description:
  cRISPR-associated endoribonuclease Cas2 2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: BN606_01348
symbol: cas1
gene_biotype: protein_coding
description:
  cRISPR-associated endonuclease Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: BN606_01350
symbol: CDC38861.1
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: BN606_01351
symbol: mprF
gene_biotype: protein_coding
description:
  Putative uncharacterized protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.


ensembl_gene_id: BN606_01353
symbol: CDC38867.1
gene_biotype: protein_coding
description:
  Putative methylase; Product inferred by homology to UniProt; Belongs to the methyltransferase superfamily.


ensembl_gene_id: BN606_01355
symbol: CDC38872.1
gene_biotype: protein_coding
description:
  Non-canonical purine NTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: BN606_01373
symbol: CDC38984.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3 5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: BN606_01374
symbol: CDC38985.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: BN606_01375
symbol: CDC38987.1
gene_biotype: protein_coding
description:
  dTDP-glucose 4 6-dehydratase; Product inferred by homology to UniProt; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: BN606_01376
symbol: CDC38989.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase RfbD1; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.


ensembl_gene_id: BN606_01380
symbol: CDC38997.1
gene_biotype: protein_coding
description:
  Glycosyltransferases probably involved in cell wall biogenesis; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_01381
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: BN606_01383
symbol: dacA
gene_biotype: protein_coding
description:
  Putative membrane protein; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: BN606_01387
symbol: CDC39009.1
gene_biotype: protein_coding
description:
  Phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_01389
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: BN606_01390
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: BN606_01391
symbol: trpF
gene_biotype: protein_coding
description:
  N-(5'-phosphoribosyl)anthranilate isomerase; Product inferred by homology to UniProt; Belongs to the TrpF family.


ensembl_gene_id: BN606_01392
symbol: trpC
gene_biotype: protein_coding
description:
  Indole-3-glycerol phosphate synthase; Product inferred by homology to UniProt; Belongs to the TrpC family.


ensembl_gene_id: BN606_01393
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: BN606_01395
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]


ensembl_gene_id: BN606_01396
symbol: CDC39027.1
gene_biotype: protein_coding
description:
  Nitrogen regulatory protein P-II; Product inferred by homology to UniProt; Belongs to the P(II) protein family.


ensembl_gene_id: BN606_01398
symbol: CDC39031.1
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: BN606_01401
symbol: CDC39035.1
gene_biotype: protein_coding
description:
  Glutamine synthetase type III; Product inferred by homology to UniProt; Belongs to the glutamine synthetase family.


ensembl_gene_id: BN606_01402
symbol: luxS
gene_biotype: protein_coding
description:
  S-ribosylhomocysteine lyase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family.


ensembl_gene_id: BN606_01404
symbol: CDC39043.1
gene_biotype: protein_coding
description:
  Glycoside hydrolase family protein; Product inferred by homology to UniProt; Belongs to the glycosyl hydrolase 2 family.


ensembl_gene_id: BN606_01415
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA-specific 2-thiouridylase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: BN606_01417
symbol: iscS
gene_biotype: protein_coding
description:
  Cysteine desulfurase NifS; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.


ensembl_gene_id: BN606_01430
symbol: CDC39096.1
gene_biotype: protein_coding
description:
  rNA methyltransferase TrmA family; Product inferred by homology to UniProt; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: BN606_01435
symbol: atpC
gene_biotype: protein_coding
description:
  aTP synthase epsilon chain 2; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: BN606_01436
symbol: atpD
gene_biotype: protein_coding
description:
  aTP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: BN606_01437
symbol: atpG
gene_biotype: protein_coding
description:
  aTP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: BN606_01438
symbol: atpH
gene_biotype: protein_coding
description:
  Putative uncharacterized protein; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation. This protein is part of the stalk that links CF(0) to CF(1). It either transmits conformational changes [...]


ensembl_gene_id: BN606_01439
symbol: atpF
gene_biotype: protein_coding
description:
  aTP synthase subunit b 2; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: BN606_01440
symbol: atpE
gene_biotype: protein_coding
description:
  Putative uncharacterized protein; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: BN606_01441
symbol: atpB
gene_biotype: protein_coding
description:
  aTP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: BN606_01449
symbol: CDC39143.1
gene_biotype: protein_coding
description:
  Putative uncharacterized protein; Product inferred by homology to UniProt; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: BN606_01454
symbol: potA-2
gene_biotype: protein_coding
description:
  Polyamine ABC transporter ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.


ensembl_gene_id: BN606_01462
symbol: CDC39167.1
gene_biotype: protein_coding
description:
  Putative uncharacterized protein; Product inferred by homology to UniProt; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: BN606_01465
symbol: CDC39170.1
gene_biotype: protein_coding
description:
  L-serine dehydratase iron-sulfur-dependent beta subunit; Product inferred by homology to UniProt; Belongs to the iron-sulfur dependent L-serine dehydratase family.


ensembl_gene_id: BN606_01466
symbol: CDC39172.1
gene_biotype: protein_coding
description:
  L-serine dehydratase iron-sulfur-dependent alpha subunit; Product inferred by homology to UniProt; Belongs to the iron-sulfur dependent L-serine dehydratase family.


ensembl_gene_id: BN606_01467
symbol: CDC39173.1
gene_biotype: protein_coding
description:
  Putative putrescine aminotransferase; Product inferred by homology to UniProt; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: BN606_01468
symbol: CDC39174.1
gene_biotype: protein_coding
description:
  Putative uncharacterized protein; Product inferred by homology to UniProt; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: BN606_01476
symbol: pfp
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.


ensembl_gene_id: BN606_01479
symbol: CDC39187.1
gene_biotype: protein_coding
description:
  Alpha-glucosidases family 31 of glycosyl hydrolases; Product inferred by homology to UniProt; Belongs to the glycosyl hydrolase 31 family.


ensembl_gene_id: BN606_01481
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: BN606_01483
symbol: CDC39191.1
gene_biotype: protein_coding
description:
  mTA/SAH nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily.


ensembl_gene_id: BN606_01496
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: BN606_01500
symbol: CDC39220.1
gene_biotype: protein_coding
description:
  Carbohydrate ABC transporter membrane protein 2 CUT1 family (TC 3.A.1.1.-); Product inferred by homology to UniProt.


ensembl_gene_id: BN606_01504
symbol: CDC39224.1
gene_biotype: protein_coding
description:
  Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_01511
symbol: CDC39261.1
gene_biotype: protein_coding
description:
  (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: BN606_01515
symbol: CDC39265.1
gene_biotype: protein_coding
description:
  Putative uncharacterized protein; Product inferred by homology to UniProt; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: BN606_01516
symbol: CDC39266.1
gene_biotype: protein_coding
description:
  Putative ABC transporter permease protein; Product inferred by homology to UniProt; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: BN606_01517
symbol: xpt
gene_biotype: protein_coding
description:
  Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.


ensembl_gene_id: BN606_01525
symbol: CDC39275.1
gene_biotype: protein_coding
description:
  sua5/YciO/YrdC/YwlC family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: BN606_01531
symbol: atpF-2
gene_biotype: protein_coding
description:
  aTP synthase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: BN606_01532
symbol: atpH-2
gene_biotype: protein_coding
description:
  aTP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: BN606_01533
symbol: atpA
gene_biotype: protein_coding
description:
  aTP synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: BN606_01536
symbol: atpC-2
gene_biotype: protein_coding
description:
  aTP synthase epsilon chain; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: BN606_01540
symbol: CDC39301.1
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Product inferred by homology to UniProt; Belongs to the ribose-phosphate pyrophosphokinase family.


ensembl_gene_id: BN606_01544
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: BN606_01545
symbol: CDC39306.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase GlgD subunit; Product inferred by homology to UniProt; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: BN606_01554
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: BN606_01555
symbol: CDC39325.1
gene_biotype: protein_coding
description:
  Isoprenyl transferase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: BN606_01556
symbol: CDC39326.1
gene_biotype: protein_coding
description:
  Phosphatidate cytidylyltransferase; Product inferred by homology to UniProt; Belongs to the CDS family.


ensembl_gene_id: BN606_01557
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: BN606_01559
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: BN606_01560
symbol: polC
gene_biotype: protein_coding
description:
  dNA polymerase III polC-type; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: BN606_01564
symbol: metN
gene_biotype: protein_coding
description:
  aBC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: BN606_01565
symbol: recA
gene_biotype: protein_coding
description:
  Protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: BN606_01569
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: BN606_01570
symbol: CDC39358.1
gene_biotype: protein_coding
description:
  cDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Product inferred by homology to UniProt; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: BN606_01571
symbol: cinA
gene_biotype: protein_coding
description:
  Putative competence-damage inducible protein; Product inferred by homology to UniProt; Belongs to the CinA family.


ensembl_gene_id: BN606_01578
symbol: rpmB
gene_biotype: protein_coding
description:
  50S ribosomal protein L28; Product inferred by homology to UniProt; Belongs to the bacterial ribosomal protein bL28 family.


ensembl_gene_id: BN606_01581
symbol: recG
gene_biotype: protein_coding
description:
  aTP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: BN606_01582
symbol: CDC39383.1
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; Product inferred by homology to UniProt; Belongs to the phosphoglycerate mutase family.


ensembl_gene_id: BN606_01589
symbol: CDC39398.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase; Product inferred by homology to UniProt; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: BN606_01591
symbol: CDC39403.1
gene_biotype: protein_coding
description:
  Oxidoreductase short-chain dehydrogenase/reductase family; Product inferred by homology to UniProt; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: BN606_01593
symbol: CDC39408.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase; Product inferred by homology to UniProt; Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: BN606_01594
symbol: recU
gene_biotype: protein_coding
description:
  Holliday junction resolvase RecU; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family.


ensembl_gene_id: BN606_01595
symbol: hisZ
gene_biotype: protein_coding
description:
  aTP phosphoribosyltransferase regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: BN606_01596
symbol: hisG
gene_biotype: protein_coding
description:
  aTP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: BN606_01597
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: BN606_01599
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP; Belongs to the PRA-CH family.


ensembl_gene_id: BN606_01610
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: BN606_01612
symbol: rpmA
gene_biotype: protein_coding
description:
  50S ribosomal protein L27; Product inferred by homology to UniProt; Belongs to the bacterial ribosomal protein bL27 family.


ensembl_gene_id: BN606_01613
symbol: obg
gene_biotype: protein_coding
description:
  gTPase obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: BN606_01615
symbol: nadD
gene_biotype: protein_coding
description:
  Probable nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: BN606_01617
symbol: rsfS
gene_biotype: protein_coding
description:
  Iojap protein 155; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: BN606_01618
symbol: CDC39453.1
gene_biotype: protein_coding
description:
  Tetrahydrofolate synthase; Product inferred by homology to UniProt; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: BN606_01620
symbol: CDC39457.1
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: BN606_01621
symbol: CDC39458.1
gene_biotype: protein_coding
description:
  Folate synthesis protein; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: BN606_01622
symbol: lexA
gene_biotype: protein_coding
description:
  lexA repressor; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: BN606_01624
symbol: CDC39461.1
gene_biotype: protein_coding
description:
  aTP-dependent RNA helicase DEAD/DEAH box family; Product inferred by homology to UniProt; Belongs to the DEAD box helicase family.


ensembl_gene_id: BN606_01625
symbol: CDC39462.1
gene_biotype: protein_coding
description:
  Site-specific recombinase phage integrase family; Product inferred by homology to UniProt; Belongs to the 'phage' integrase family.


ensembl_gene_id: BN606_01628
symbol: CDC39465.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: BN606_01629
symbol: lspA
gene_biotype: protein_coding
description:
  Lipoprotein signal peptidase 2; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: BN606_01631
symbol: sepF
gene_biotype: protein_coding
description:
  Cell division protein sepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: BN606_01632
symbol: CDC39469.1
gene_biotype: protein_coding
description:
  Pyridoxal phosphate enzyme YggS family; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: BN606_01635
symbol: CDC39472.1
gene_biotype: protein_coding
description:
  d-alanyl-D-alanine carboxypeptidase; Product inferred by homology to UniProt; Belongs to the peptidase S11 family.


ensembl_gene_id: BN606_01637
symbol: CDC39474.1
gene_biotype: protein_coding
description:
  Cell division protein FtsW/RodA/SpoVE family; Product inferred by homology to UniProt; Belongs to the SEDS family.


ensembl_gene_id: BN606_01638
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: BN606_01640
symbol: minC
gene_biotype: protein_coding
description:
  Probable septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: BN606_01647
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: BN606_01648
symbol: mutL
gene_biotype: protein_coding
description:
  dNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: BN606_01649
symbol: mutS
gene_biotype: protein_coding
description:
  dNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: BN606_01650
symbol: miaB
gene_biotype: protein_coding
description:
  (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: BN606_01651
symbol: proA
gene_biotype: protein_coding
description:
  Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: BN606_01652
symbol: CDC39499.1
gene_biotype: protein_coding
description:
  5-formyltetrahydrofolate cyclo-ligase; Product inferred by homology to UniProt; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.


ensembl_gene_id: BN606_01654
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: BN606_01658
symbol: CDC39512.1
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: BN606_01659
symbol: ybeY
gene_biotype: protein_coding
description:
  Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: BN606_01663
symbol: rpsU
gene_biotype: protein_coding
description:
  30S ribosomal protein S21; Product inferred by homology to UniProt; Belongs to the bacterial ribosomal protein bS21 family.


ensembl_gene_id: BN606_01665
symbol: alaS
gene_biotype: protein_coding
description:
  alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: BN606_01675
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Product inferred by homology to UniProt; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: BN606_01676
symbol: plsY
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: BN606_01677
symbol: der
gene_biotype: protein_coding
description:
  gTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: BN606_01679
symbol: CDC39550.1
gene_biotype: protein_coding
description:
  Putative YfiH protein; Product inferred by homology to UniProt; Belongs to the multicopper oxidase YfiH/RL5 family.


ensembl_gene_id: BN606_01680
symbol: CDC39553.1
gene_biotype: protein_coding
description:
  uPF0102 protein RUMHYD_00303; Product inferred by homology to UniProt; Belongs to the UPF0102 family.


ensembl_gene_id: BN606_01683
symbol: CDC39597.1
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: BN606_01690
symbol: CDC39608.1
gene_biotype: protein_coding
description:
  3-hydroxybutyryl-CoA dehydratase; Product inferred by homology to UniProt; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: BN606_01691
symbol: CDC39611.1
gene_biotype: protein_coding
description:
  acetyl-CoA acetyltransferase; Product inferred by homology to UniProt; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: BN606_01696
symbol: CDC39623.1
gene_biotype: protein_coding
description:
  aBC transporter permease protein; Product inferred by homology to UniProt; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: BN606_01700
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: BN606_01701
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-N(1)-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: BN606_01702
symbol: rimM
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: BN606_01703
symbol: CDC39630.1
gene_biotype: protein_coding
description:
  uPF0109 protein BUTYVIB_00048; Product inferred by homology to UniProt; Belongs to the UPF0109 family.


ensembl_gene_id: BN606_01704
symbol: rpsP
gene_biotype: protein_coding
description:
  30S ribosomal protein S16; Product inferred by homology to UniProt; Belongs to the bacterial ribosomal protein bS16 family.


ensembl_gene_id: BN606_01705
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: BN606_01706
symbol: CDC39633.1
gene_biotype: protein_coding
description:
  uPF0122 protein BUTYVIB_00051; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.


ensembl_gene_id: BN606_01712
symbol: buk
gene_biotype: protein_coding
description:
  Probable butyrate kinase; Product inferred by homology to UniProt; Belongs to the acetokinase family.


ensembl_gene_id: BN606_01715
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: BN606_01716
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome partition protein Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: BN606_01717
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: BN606_01719
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: BN606_01720
symbol: rpmF
gene_biotype: protein_coding
description:
  50S ribosomal protein L32; Product inferred by homology to UniProt; Belongs to the bacterial ribosomal protein bL32 family.


ensembl_gene_id: BN606_01722
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: BN606_01724
symbol: tmcAL
gene_biotype: protein_coding
description:
  uPF0348 protein BUTYVIB_00064; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.


ensembl_gene_id: BN606_01726
symbol: CDC39669.1
gene_biotype: protein_coding
description:
  uPF0237 protein BUTYVIB_00066; Product inferred by homology to UniProt; Belongs to the UPF0237 family.


ensembl_gene_id: BN606_01730
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: BN606_01731
symbol: polA
gene_biotype: protein_coding
description:
  dNA polymerase; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.


ensembl_gene_id: BN606_01733
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: BN606_01734
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: BN606_01737
symbol: rnfB
gene_biotype: protein_coding
description:
  rnfB/polyferredoxin; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.


ensembl_gene_id: BN606_01738
symbol: rnfA
gene_biotype: protein_coding
description:
  nADH:ubiquinone oxidoreductase Na(+)-translocating E subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: BN606_01739
symbol: rnfE
gene_biotype: protein_coding
description:
  nADH:ubiquinone oxidoreductase Na(+)-translocating D subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: BN606_01740
symbol: rnfG
gene_biotype: protein_coding
description:
  Electron transport complex RnfABCDGE type G subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.


ensembl_gene_id: BN606_01741
symbol: rnfD
gene_biotype: protein_coding
description:
  Na-translocating NADH-quinone reductase Nqr2 subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: BN606_01742
symbol: rnfC
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase A subunit; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.


ensembl_gene_id: BN606_01746
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: BN606_01750
symbol: CDC39698.1
gene_biotype: protein_coding
description:
  Putative uncharacterized protein; Product inferred by homology to UniProt; Belongs to the TtcA family.


ensembl_gene_id: BN606_01752
symbol: CDC39704.1
gene_biotype: protein_coding
description:
  Putative transcriptional regulator with C-terminal CBS domains; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_01762
symbol: mutS2
gene_biotype: protein_coding
description:
  mutS2 protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: BN606_01765
symbol: CDC39728.1
gene_biotype: protein_coding
description:
  Putative tRNA (cytidine(34)-2'-O)-methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: BN606_01781
symbol: CDC39744.1
gene_biotype: protein_coding
description:
  3-oxoacyl-(Acyl-carrier-protein) synthase II; Product inferred by homology to UniProt; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: BN606_01791
symbol: CDC39756.1
gene_biotype: protein_coding
description:
  Putative neopullulanase 1; Product inferred by homology to UniProt; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: BN606_01792
symbol: ftsH
gene_biotype: protein_coding
description:
  aTP-dependent zinc metalloprotease FtsH 1; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: BN606_01793
symbol: CDC39760.1
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Product inferred by homology to UniProt; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: BN606_01794
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: BN606_01800
symbol: CDC39774.1
gene_biotype: protein_coding
description:
  dNA-binding protein HU; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: BN606_01801
symbol: coaX
gene_biotype: protein_coding
description:
  Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: BN606_01806
symbol: CDC39780.1
gene_biotype: protein_coding
description:
  Putative thiamine biosynthesis protein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: BN606_01812
symbol: CDC39788.1
gene_biotype: protein_coding
description:
  gntR family transcriptional regulator transcriptional repressor for pyruvate dehydrogenase complex; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_01815
symbol: CDC39793.1
gene_biotype: protein_coding
description:
  Putative uncharacterized protein; Product inferred by homology to UniProt; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: BN606_01820
symbol: ddl
gene_biotype: protein_coding
description:
  d-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: BN606_01823
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: BN606_01830
symbol: proS
gene_biotype: protein_coding
description:
  proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro).


ensembl_gene_id: BN606_01834
symbol: CDC39848.1
gene_biotype: protein_coding
description:
  Alginate O-acetylation protein AlgI; Product inferred by homology to UniProt; Belongs to the membrane-bound acyltransferase family.


ensembl_gene_id: BN606_01836
symbol: CDC39850.1
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase family protein; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_01838
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: BN606_01859
symbol: rlmH
gene_biotype: protein_coding
description:
  Ribosomal RNA large subunit methyltransferase H; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: BN606_01868
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: BN606_01869
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: BN606_01870
symbol: CDC39992.1
gene_biotype: protein_coding
description:
  Putative uncharacterized protein; Product inferred by homology to UniProt; Belongs to the ribF family.


ensembl_gene_id: BN606_01871
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: BN606_01873
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: BN606_01874
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: BN606_01877
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription termination factor NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: BN606_01878
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: BN606_01887
symbol: CDC40022.1
gene_biotype: protein_coding
description:
  Sigma-70 region 2; Product inferred by homology to UniProt; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: BN606_01888
symbol: ung
gene_biotype: protein_coding
description:
  uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine.


ensembl_gene_id: BN606_01889
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: BN606_01890
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: BN606_01894
symbol: galK
gene_biotype: protein_coding
description:
  Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.


ensembl_gene_id: BN606_01895
symbol: CDC40043.1
gene_biotype: protein_coding
description:
  uDP-glucose 4-epimerase; Product inferred by homology to UniProt; Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: BN606_01898
symbol: tal
gene_biotype: protein_coding
description:
  Probable transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: BN606_01899
symbol: CDC40047.1
gene_biotype: protein_coding
description:
  Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.


ensembl_gene_id: BN606_01900
symbol: dtd
gene_biotype: protein_coding
description:
  d-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: BN606_01902
symbol: CDC40050.1
gene_biotype: protein_coding
description:
  Putative ABC-type transport system periplasmic component/surface lipoprotein; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_01919
symbol: CDC40094.1
gene_biotype: protein_coding
description:
  Putative bacterial type II secretion system protein F domain protein; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_01936
symbol: CDC40124.1
gene_biotype: protein_coding
description:
  dHH subfamily 1 protein; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.


ensembl_gene_id: BN606_01938
symbol: CDC40126.1
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: BN606_01944
symbol: mntP
gene_biotype: protein_coding
description:
  Putative manganese efflux pump MntP; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.


ensembl_gene_id: BN606_01947
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: BN606_01957
symbol: metG
gene_biotype: protein_coding
description:
  methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: BN606_01959
symbol: rsmA
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: BN606_01961
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: BN606_01965
symbol: pfkA-2
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.


ensembl_gene_id: BN606_01966
symbol: dnaX
gene_biotype: protein_coding
description:
  dNA polymerase III gamma and tau subunit; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: BN606_01967
symbol: CDC40177.1
gene_biotype: protein_coding
description:
  Nucleoid-associated protein BUTYVIB_00868; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: BN606_01968
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: BN606_01976
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: BN606_01977
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: BN606_01978
symbol: CDC40198.1
gene_biotype: protein_coding
description:
  L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_01982
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase [ATP]; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.


ensembl_gene_id: BN606_01998
symbol: rsmH-2
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase H 2; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: BN606_02003
symbol: CDC40243.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Product inferred by homology to UniProt; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: BN606_02007
symbol: nadE
gene_biotype: protein_coding
description:
  Glutamine-dependent NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: BN606_02009
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: BN606_02010
symbol: dapA
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: BN606_02017
symbol: CDC40287.1
gene_biotype: protein_coding
description:
  Integral membrane sensor signal transduction histidine kinase; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_02018
symbol: CDC40289.1
gene_biotype: protein_coding
description:
  Two component transcriptional regulator winged helix family; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_02027
symbol: valS
gene_biotype: protein_coding
description:
  valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: BN606_02041
symbol: queF
gene_biotype: protein_coding
description:
  nADPH-dependent 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.


ensembl_gene_id: BN606_02042
symbol: CDC40338.1
gene_biotype: protein_coding
description:
  Putative uncharacterized protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: BN606_02063
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: BN606_02064
symbol: pgk
gene_biotype: protein_coding
description:
  Phosphoglycerate kinase; Product inferred by homology to UniProt; Belongs to the phosphoglycerate kinase family.


ensembl_gene_id: BN606_02065
symbol: CDC40399.1
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase type I; Product inferred by homology to UniProt; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: BN606_02066
symbol: CDC40402.1
gene_biotype: protein_coding
description:
  Histidinol-phosphatase; Product inferred by homology to UniProt; Belongs to the PHP hydrolase family. HisK subfamily.


ensembl_gene_id: BN606_02071
symbol: metAA
gene_biotype: protein_coding
description:
  Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.


ensembl_gene_id: BN606_02072
symbol: ligA
gene_biotype: protein_coding
description:
  dNA ligase NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: BN606_02085
symbol: CDC40440.1
gene_biotype: protein_coding
description:
  Putative uncharacterized protein; Product inferred by homology to UniProt; Belongs to the UPF0342 family.


ensembl_gene_id: BN606_02086
symbol: rnj
gene_biotype: protein_coding
description:
  Metallo-beta-lactamase family protein; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: BN606_02088
symbol: CDC40443.1
gene_biotype: protein_coding
description:
  Putative Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: BN606_02089
symbol: CDC40444.1
gene_biotype: protein_coding
description:
  uPF0297 protein BUTYVIB_01565; Product inferred by homology to UniProt; Belongs to the UPF0297 family.


ensembl_gene_id: BN606_02092
symbol: thiI
gene_biotype: protein_coding
description:
  Probable tRNA sulfurtransferase; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.


ensembl_gene_id: BN606_02094
symbol: CDC40449.1
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: BN606_02095
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: BN606_02097
symbol: scpB
gene_biotype: protein_coding
description:
  Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: BN606_02098
symbol: scpA
gene_biotype: protein_coding
description:
  Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: BN606_02102
symbol: gpmI
gene_biotype: protein_coding
description:
  2 3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: BN606_02104
symbol: CDC40459.1
gene_biotype: protein_coding
description:
  Putative oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: BN606_02106
symbol: lepA
gene_biotype: protein_coding
description:
  Elongation factor 4; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: BN606_02108
symbol: CDC40463.1
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; Product inferred by homology to UniProt.


ensembl_gene_id: BN606_02114
symbol: queA
gene_biotype: protein_coding
description:
  s-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: BN606_02115
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanine--tRNA ligase beta subunit; Product inferred by homology to UniProt; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: BN606_02116
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanine--tRNA ligase alpha subunit; Product inferred by homology to UniProt; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: BN606_02123
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.


# pathwayInfo

id: CL:100
description: Ammonia ligase activity, and Glutamate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:100_Ammonia_ligase_activity,_and_Glutamate_metabolic_process


id: CL:1000
description: Mixed, incl. Protein folding, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1000_Mixed,_incl._Protein_folding,_and_ATP-dependent_peptidase_activity


id: CL:1001
description: Protein folding, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1001_Protein_folding,_and_ATP-dependent_peptidase_activity


id: CL:1003
description: Protein folding, and Clp protease
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1003_Protein_folding,_and_Clp_protease


id: CL:1007
description: Protein folding chaperone, and DnaJ domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1007_Protein_folding_chaperone,_and_DnaJ_domain


id: CL:1040
description: Cadherin-like beta sandwich domain, and UVR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1040_Cadherin-like_beta_sandwich_domain,_and_UVR_domain


id: CL:1051
description: Mixed, incl. Peptidase S1C, and Metalloenzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1051_Mixed,_incl._Peptidase_S1C,_and_Metalloenzyme


id: CL:1053
description: Mixed, incl. Metalloenzyme, and Zn-dependent metallo-hydrolase RNA specificity domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1053_Mixed,_incl._Metalloenzyme,_and_Zn-dependent_metallo-hydrolase_RNA_specificity_domain


id: CL:1074
description: Mixed, incl. Catalytic activity, acting on DNA, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1074_Mixed,_incl._Catalytic_activity,_acting_on_DNA,_and_DNA_replication


id: CL:1075
description: Catalytic activity, acting on DNA, and DNA replication
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1075_Catalytic_activity,_acting_on_DNA,_and_DNA_replication


id: CL:1076
description: DNA replication, and DNA topoisomerase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1076_DNA_replication,_and_DNA_topoisomerase_activity


id: CL:1077
description: DNA replication, and SOS response
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1077_DNA_replication,_and_SOS_response


id: CL:1079
description: DNA polymerase activity, and Single-strand binding protein family
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1079_DNA_polymerase_activity,_and_Single-strand_binding_protein_family


id: CL:1103
description: Nucleotide excision repair, and DNA recombination and repair protein RecA-like, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1103_Nucleotide_excision_repair,_and_DNA_recombination_and_repair_protein_RecA-like,_ATP-binding_domain


id: CL:1104
description: DNA repair complex, and UvrD/REP helicase N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1104_DNA_repair_complex,_and_UvrD/REP_helicase_N-terminal_domain


id: CL:1119
description: DNA recombination and repair protein RecA-like, ATP-binding domain, and Autocatalytic cleavage
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1119_DNA_recombination_and_repair_protein_RecA-like,_ATP-binding_domain,_and_Autocatalytic_cleavage


id: CL:112
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and GAD domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:112_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_GAD_domain


id: CL:1129
description: DNA topoisomerase, type IIA-like domain superfamily, and RecF/RecN/SMC, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1129_DNA_topoisomerase,_type_IIA-like_domain_superfamily,_and_RecF/RecN/SMC,_N-terminal


id: CL:1143
description: Exodeoxyribonuclease V complex, and PD-(D/E)XK nuclease superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1143_Exodeoxyribonuclease_V_complex,_and_PD-(D/E)XK_nuclease_superfamily


id: CL:1155
description: Mixed, incl. K homology domain-like, alpha/beta, and Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1155_Mixed,_incl._K_homology_domain-like,_alpha/beta,_and_Chromosome_segregation


id: CL:1157
description: Mixed, incl. Protein carrier chaperone, and RNA (guanine-N7)-methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1157_Mixed,_incl._Protein_carrier_chaperone,_and_RNA_(guanine-N7)-methylation


id: CL:1185
description: Mixed, incl. Cysteine biosynthetic process, and Ribonuclease III domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1185_Mixed,_incl._Cysteine_biosynthetic_process,_and_Ribonuclease_III_domain


id: CL:1203
description: Mixed, incl. Protein-exporting ATPase activity, and Cold shock domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1203_Mixed,_incl._Protein-exporting_ATPase_activity,_and_Cold_shock_domain


id: CL:1214
description: Mixed, incl. CarD-like/TRCF domain, and CNNM, transmembrane domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1214_Mixed,_incl._CarD-like/TRCF_domain,_and_CNNM,_transmembrane_domain


id: CL:1223
description: Mixed, incl. Histidine biosynthesis, and Pteridine-containing compound biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1223_Mixed,_incl._Histidine_biosynthesis,_and_Pteridine-containing_compound_biosynthetic_process


id: CL:1224
description: Mixed, incl. Histidine biosynthesis, and Pteridine-containing compound biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1224_Mixed,_incl._Histidine_biosynthesis,_and_Pteridine-containing_compound_biosynthetic_process


id: CL:1225
description: Mixed, incl. Histidine biosynthesis, and rRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1225_Mixed,_incl._Histidine_biosynthesis,_and_rRNA_pseudouridine_synthesis


id: CL:1226
description: Histidine biosynthesis, and rRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1226_Histidine_biosynthesis,_and_rRNA_pseudouridine_synthesis


id: CL:1246
description: rRNA pseudouridine synthesis, and 16S rRNA methyltransferase RsmB/F
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1246_rRNA_pseudouridine_synthesis,_and_16S_rRNA_methyltransferase_RsmB/F


id: CL:1257
description: Mixed, incl. Acyl-ACP thioesterase, and Dimethylallyl diphosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1257_Mixed,_incl._Acyl-ACP_thioesterase,_and_Dimethylallyl_diphosphate_metabolic_process


id: CL:1267
description: Pteridine-containing compound biosynthetic process, and NAD biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1267_Pteridine-containing_compound_biosynthetic_process,_and_NAD_biosynthetic_process


id: CL:1269
description: NAD biosynthetic process, and Ribosome assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1269_NAD_biosynthetic_process,_and_Ribosome_assembly


id: CL:128
description: Arginine metabolic process, and Lysine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:128_Arginine_metabolic_process,_and_Lysine_metabolic_process


id: CL:1289
description: Mixed, incl. Metallo-dependent phosphatase-like, and THUMP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1289_Mixed,_incl._Metallo-dependent_phosphatase-like,_and_THUMP_domain


id: CL:129
description: Lysine metabolic process, and Arginine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:129_Lysine_metabolic_process,_and_Arginine_metabolic_process


id: CL:1291
description: Mixed, incl. THUMP domain, and Inosine triphosphate pyrophosphatase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1291_Mixed,_incl._THUMP_domain,_and_Inosine_triphosphate_pyrophosphatase-like


id: CL:1310
description: Mixed, incl. Peptidoglycan biosynthesis, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1310_Mixed,_incl._Peptidoglycan_biosynthesis,_and_Cell_division


id: CL:1311
description: Mixed, incl. Regulation of cell shape, and Cell division
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1311_Mixed,_incl._Regulation_of_cell_shape,_and_Cell_division


id: CL:1312
description: Mixed, incl. Peptidoglycan biosynthesis, and Cell cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1312_Mixed,_incl._Peptidoglycan_biosynthesis,_and_Cell_cycle


id: CL:1313
description: Peptidoglycan biosynthesis, and Cell cycle
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1313_Peptidoglycan_biosynthesis,_and_Cell_cycle


id: CL:1314
description: Peptidoglycan biosynthesis, and Ami_3
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1314_Peptidoglycan_biosynthesis,_and_Ami_3


id: CL:1317
description: Peptidoglycan synthesis, and Cell cycle protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1317_Peptidoglycan_synthesis,_and_Cell_cycle_protein


id: CL:1320
description: Mur ligase, C-terminal, and UDP-glycosyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1320_Mur_ligase,_C-terminal,_and_UDP-glycosyltransferase_activity


id: CL:1346
description: Beta-lactamase/transpeptidase-like, and Ami_3
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1346_Beta-lactamase/transpeptidase-like,_and_Ami_3


id: CL:1373
description: RNA-binding S4 domain, and Alanine racemase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1373_RNA-binding_S4_domain,_and_Alanine_racemase,_N-terminal


id: CL:1386
description: Mixed, incl. ATP-binding cassette (ABC) transporter complex, and Peptidase U32
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1386_Mixed,_incl._ATP-binding_cassette_(ABC)_transporter_complex,_and_Peptidase_U32


id: CL:1388
description: Mixed, incl. Peptidase U32, and NUDIX hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1388_Mixed,_incl._Peptidase_U32,_and_NUDIX_hydrolase


id: CL:1400
description: Mixed, incl. ABC 3 transport family, and Ferric-uptake regulator, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1400_Mixed,_incl._ABC_3_transport_family,_and_Ferric-uptake_regulator,_C-terminal_domain


id: CL:1410
description: Mixed, incl. Mismatch repair, and Proline biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1410_Mixed,_incl._Mismatch_repair,_and_Proline_biosynthesis


id: CL:1412
description: Mixed, incl. Proline biosynthesis, and Cytidine and deoxycytidylate deaminase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1412_Mixed,_incl._Proline_biosynthesis,_and_Cytidine_and_deoxycytidylate_deaminase_domain


id: CL:1415
description: Mixed, incl. FAD/NAD(P)-binding domain superfamily, and YabP family
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1415_Mixed,_incl._FAD/NAD(P)-binding_domain_superfamily,_and_YabP_family


id: CL:1447
description: Cell morphogenesis, and Metalloprotease
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1447_Cell_morphogenesis,_and_Metalloprotease


id: CL:1462
description: Mixed, incl. One carbon pool by folate, and Protein serine/threonine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1462_Mixed,_incl._One_carbon_pool_by_folate,_and_Protein_serine/threonine_kinase_activity


id: CL:1463
description: Mixed, incl. One carbon pool by folate, and Undecaprenyl-diphosphatase UppP
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1463_Mixed,_incl._One_carbon_pool_by_folate,_and_Undecaprenyl-diphosphatase_UppP


id: CL:1464
description: Mixed, incl. One carbon pool by folate, and rRNA methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1464_Mixed,_incl._One_carbon_pool_by_folate,_and_rRNA_methyltransferase_activity


id: CL:1465
description: Mixed, incl. Folic acid-containing compound metabolic process, and rRNA methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1465_Mixed,_incl._Folic_acid-containing_compound_metabolic_process,_and_rRNA_methyltransferase_activity


id: CL:1467
description: Mixed, incl. rRNA methyltransferase activity, and ABC transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1467_Mixed,_incl._rRNA_methyltransferase_activity,_and_ABC_transporter


id: CL:1469
description: rRNA methyltransferase activity, and Formyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1469_rRNA_methyltransferase_activity,_and_Formyl_transferase


id: CL:1492
description: Tetrahydrofolate interconversion, and Folylpolyglutamate synthetase
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1492_Tetrahydrofolate_interconversion,_and_Folylpolyglutamate_synthetase


id: CL:1508
description: Mixed, incl. CNNM, transmembrane domain, and Alanine racemase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1508_Mixed,_incl._CNNM,_transmembrane_domain,_and_Alanine_racemase,_N-terminal


id: CL:1524
description: Mixed, incl. Guanylate kinase-like domain, and Undecaprenyl-diphosphatase UppP
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1524_Mixed,_incl._Guanylate_kinase-like_domain,_and_Undecaprenyl-diphosphatase_UppP


id: CL:1538
description: Mixed, incl. Protein serine/threonine kinase activity, and SMAD/FHA domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1538_Mixed,_incl._Protein_serine/threonine_kinase_activity,_and_SMAD/FHA_domain_superfamily


id: CL:1540
description: Mixed, incl. BspA type Leucine rich repeat region, and SMAD/FHA domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1540_Mixed,_incl._BspA_type_Leucine_rich_repeat_region,_and_SMAD/FHA_domain_superfamily


id: CL:1542
description: PASTA domain, and SMAD/FHA domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1542_PASTA_domain,_and_SMAD/FHA_domain_superfamily


id: CL:1556
description: Mixed, incl. Acyl-ACP thioesterase, and Protein kinase, ATP binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1556_Mixed,_incl._Acyl-ACP_thioesterase,_and_Protein_kinase,_ATP_binding_site


id: CL:1575
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1575_Mostly_uncharacterized,_incl._ABC_transporter,_CbiO/EcfA_subunit,_and_Domain_of_unknown_function_DUF4430

description:
  Mostly uncharacterized, incl. ABC transporter, CbiO/EcfA subunit, and Domain of unknown function DUF4430


id: CL:1577
description: Mixed, incl. Domain of unknown function DUF4430, and D-Alanine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1577_Mixed,_incl._Domain_of_unknown_function_DUF4430,_and_D-Alanine_metabolism


id: CL:1580
description: Domain of unknown function DUF4430, and ECF-type riboflavin transporter, S component
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1580_Domain_of_unknown_function_DUF4430,_and_ECF-type_riboflavin_transporter,_S_component


id: CL:1593
description: D-Alanine metabolism, and Diaminopimelate decarboxylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1593_D-Alanine_metabolism,_and_Diaminopimelate_decarboxylase_activity


id: CL:1607
description: Mixed, incl. ABC transporter, CbiO/EcfA subunit, and Microbody
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1607_Mixed,_incl._ABC_transporter,_CbiO/EcfA_subunit,_and_Microbody


id: CL:161
description: Mixed, incl. Carbon-nitrogen hydrolase, and Aminotransferase class-III
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:161_Mixed,_incl._Carbon-nitrogen_hydrolase,_and_Aminotransferase_class-III


id: CL:1610
description: ABC transporter, CbiO/EcfA subunit, and Vitamin transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1610_ABC_transporter,_CbiO/EcfA_subunit,_and_Vitamin_transport


id: CL:1629
description: Mixed, incl. Band 7 domain, and Peptidase M41
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1629_Mixed,_incl._Band_7_domain,_and_Peptidase_M41


id: CL:163
description: Aminotransferase class-III, and NAD synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:163_Aminotransferase_class-III,_and_NAD_synthase


id: CL:1631
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1631_Mixed,_incl._RNA_polymerase_binding,_and_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors

description:
  Mixed, incl. RNA polymerase binding, and Oxidoreductase activity, acting on the CH-CH group of donors


id: CL:1653
description: Mixed, incl. HAD superfamily, and ncRNA processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1653_Mixed,_incl._HAD_superfamily,_and_ncRNA_processing


id: CL:1654
description: Mixed, incl. LytR_cpsA_psr family, and Inorganic diphosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1654_Mixed,_incl._LytR_cpsA_psr_family,_and_Inorganic_diphosphatase_activity


id: CL:1655
description: Mixed, incl. LytR_cpsA_psr family, and RNA capping
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1655_Mixed,_incl._LytR_cpsA_psr_family,_and_RNA_capping


id: CL:1658
description: Mixed, incl. Peptidase U32, and O-methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1658_Mixed,_incl._Peptidase_U32,_and_O-methyltransferase_activity


id: CL:1680
description: Mixed, incl. Inorganic diphosphatase activity, and Quorum sensing
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1680_Mixed,_incl._Inorganic_diphosphatase_activity,_and_Quorum_sensing


id: CL:1694
description: Mixed, incl. Calcium ion transport, and IMP cyclohydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1694_Mixed,_incl._Calcium_ion_transport,_and_IMP_cyclohydrolase_activity


id: CL:1710
description: Mixed, incl. Lipase activity, and Peptidyl-glutamine methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1710_Mixed,_incl._Lipase_activity,_and_Peptidyl-glutamine_methylation


id: CL:1711
description: Mixed, incl. Lipase activity, and Peptidyl-glutamine methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1711_Mixed,_incl._Lipase_activity,_and_Peptidyl-glutamine_methylation


id: CL:1713
description: Lipase activity, and Membrane bound O-acyl transferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1713_Lipase_activity,_and_Membrane_bound_O-acyl_transferase_family


id: CL:1734
description: Mixed, incl. Protein repair, and 5-3 exonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1734_Mixed,_incl._Protein_repair,_and_5-3_exonuclease_activity


id: CL:1743
description: Mixed, incl. Peptidase S26, and Succinylglutamate desuccinylase/aspartoacylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1743_Mixed,_incl._Peptidase_S26,_and_Succinylglutamate_desuccinylase/aspartoacylase


id: CL:1744
description: Mixed, incl. Signal peptide processing, and Succinylglutamate desuccinylase/aspartoacylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1744_Mixed,_incl._Signal_peptide_processing,_and_Succinylglutamate_desuccinylase/aspartoacylase


id: CL:1745
description: Mixed, incl. Succinylglutamate desuccinylase/aspartoacylase, and EamA-like transporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1745_Mixed,_incl._Succinylglutamate_desuccinylase/aspartoacylase,_and_EamA-like_transporter_family


id: CL:1758
description: Mixed, incl. AsnC-type HTH domain, and Signal peptide processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1758_Mixed,_incl._AsnC-type_HTH_domain,_and_Signal_peptide_processing


id: CL:1768
description: Mixed, incl. Thioesterase superfamily, and RNA-DNA hybrid ribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1768_Mixed,_incl._Thioesterase_superfamily,_and_RNA-DNA_hybrid_ribonuclease_activity


id: CL:1791
description: Mixed, incl. Flagellar assembly, and Signal transduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1791_Mixed,_incl._Flagellar_assembly,_and_Signal_transduction


id: CL:1792
description: Flagellar assembly, and Signal transduction
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1792_Flagellar_assembly,_and_Signal_transduction


id: CL:1793
description: Mixed, incl. Flagellar assembly, and Glycosyl transferases group 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1793_Mixed,_incl._Flagellar_assembly,_and_Glycosyl_transferases_group_1


id: CL:1794
description: Flagellar assembly, and Bacterial-type flagellum organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1794_Flagellar_assembly,_and_Bacterial-type_flagellum_organization


id: CL:1802
description: Bacterial-type flagellum basal body, and Bacterial-type flagellum assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1802_Bacterial-type_flagellum_basal_body,_and_Bacterial-type_flagellum_assembly


id: CL:1804
description: Cytoskeletal motor activity, and Flagella basal body rod protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1804_Cytoskeletal_motor_activity,_and_Flagella_basal_body_rod_protein


id: CL:1806
description: Bacterial-type flagellum basal body, rod, and Cytoskeletal motor activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1806_Bacterial-type_flagellum_basal_body,_rod,_and_Cytoskeletal_motor_activity


id: CL:1829
description: Bacterial flagellum protein export, and Bacterial-type flagellum assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1829_Bacterial_flagellum_protein_export,_and_Bacterial-type_flagellum_assembly


id: CL:183
description: Cellular amino acid biosynthetic process, and Cysteine and methionine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:183_Cellular_amino_acid_biosynthetic_process,_and_Cysteine_and_methionine_metabolism


id: CL:184
description: Branched-chain amino acid metabolic process, and Cysteine and methionine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:184_Branched-chain_amino_acid_metabolic_process,_and_Cysteine_and_methionine_metabolism


id: CL:185
description: Branched-chain amino acid metabolic process, and Glycine, serine and threonine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:185_Branched-chain_amino_acid_metabolic_process,_and_Glycine,_serine_and_threonine_metabolism


id: CL:1853
description: Mixed, incl. Bacterial-type flagellum hook, and Bacterial flagellum biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1853_Mixed,_incl._Bacterial-type_flagellum_hook,_and_Bacterial_flagellum_biogenesis


id: CL:1856
description: Bacterial-type flagellum hook, and Flagellar protein FliS
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1856_Bacterial-type_flagellum_hook,_and_Flagellar_protein_FliS


id: CL:186
description: Branched-chain amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:186_Branched-chain_amino_acid_metabolic_process


id: CL:1893
description: Mixed, incl. Glycosyl transferases group 1, and Protein serine/threonine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1893_Mixed,_incl._Glycosyl_transferases_group_1,_and_Protein_serine/threonine_kinase_activity


id: CL:1894
description: Mixed, incl. Glycosyl transferases group 1, and Cyclic nucleotide-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1894_Mixed,_incl._Glycosyl_transferases_group_1,_and_Cyclic_nucleotide-binding_domain


id: CL:1899
description: Mixed, incl. Cyclic nucleotide-binding domain, and Protein serine/threonine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1899_Mixed,_incl._Cyclic_nucleotide-binding_domain,_and_Protein_serine/threonine_kinase_activity


id: CL:1917
description: Mixed, incl. Flagellar assembly protein A, and Lytic transglycosylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1917_Mixed,_incl._Flagellar_assembly_protein_A,_and_Lytic_transglycosylase_activity


id: CL:1926
description: Signal transduction, and Nucleotide cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1926_Signal_transduction,_and_Nucleotide_cyclase


id: CL:1928
description: Phosphorelay signal transduction system, and Nucleotide cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1928_Phosphorelay_signal_transduction_system,_and_Nucleotide_cyclase


id: CL:1929
description: Nucleotide cyclase, and HPT domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1929_Nucleotide_cyclase,_and_HPT_domain_superfamily


id: CL:1934
description: Nucleotide cyclase, and His Kinase A (phosphoacceptor) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1934_Nucleotide_cyclase,_and_His_Kinase_A_(phosphoacceptor)_domain


id: CL:1939
description: Nucleotide cyclase, and Phosphoric diester hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1939_Nucleotide_cyclase,_and_Phosphoric_diester_hydrolase_activity


id: CL:1942
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1942_Mixed,_incl._PAS_domain_superfamily,_and_Motif_C-terminal_to_PAS_motifs_(likely_to_contribute_to_PAS_structural_domain)

description:
  Mixed, incl. PAS domain superfamily, and Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)


id: CL:1974
description: Two-component regulatory system
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1974_Two-component_regulatory_system


id: CL:1976
description: Two-component regulatory system
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:1976_Two-component_regulatory_system


id: CL:2005
description: CheW-like domain, and Chemotaxis
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2005_CheW-like_domain,_and_Chemotaxis


id: CL:2029
description: Mixed, incl. Prokaryotic N-terminal methylation site, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2029_Mixed,_incl._Prokaryotic_N-terminal_methylation_site,_and_Pilus_organization


id: CL:2031
description: Mixed, incl. Pilus organization, and Protein transport across the cell outer membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2031_Mixed,_incl._Pilus_organization,_and_Protein_transport_across_the_cell_outer_membrane


id: CL:2069
description: Mostly uncharacterized, incl. Cell cycle, and tRNA processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2069_Mostly_uncharacterized,_incl._Cell_cycle,_and_tRNA_processing


id: CL:2070
description: Mostly uncharacterized, incl. Cell cycle, and Bacterial nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2070_Mostly_uncharacterized,_incl._Cell_cycle,_and_Bacterial_nucleoid


id: CL:2072
description: Mostly uncharacterized, incl. Cell cycle, and Bacterial nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2072_Mostly_uncharacterized,_incl._Cell_cycle,_and_Bacterial_nucleoid


id: CL:2073
description: Mostly uncharacterized, incl. Cell cycle process, and Type II/IV secretion system protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2073_Mostly_uncharacterized,_incl._Cell_cycle_process,_and_Type_II/IV_secretion_system_protein


id: CL:2076
description: Mostly uncharacterized, incl. TPR repeat, and Toxin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2076_Mostly_uncharacterized,_incl._TPR_repeat,_and_Toxin_metabolic_process


id: CL:2077
description: Mostly uncharacterized, incl. TPR repeat, and Toxin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2077_Mostly_uncharacterized,_incl._TPR_repeat,_and_Toxin_metabolic_process


id: CL:2079
description: Mostly uncharacterized, incl. Cell division site, and Peptidoglycan-based cell wall
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2079_Mostly_uncharacterized,_incl._Cell_division_site,_and_Peptidoglycan-based_cell_wall


id: CL:2080
description: Mixed, incl. Cell division site, and TPR repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2080_Mixed,_incl._Cell_division_site,_and_TPR_repeat


id: CL:2093
description: Mixed, incl. Peptidoglycan-based cell wall
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2093_Mixed,_incl._Peptidoglycan-based_cell_wall


id: CL:2110
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2110_Mixed,_incl._Negative_regulation_of_cell_differentiation,_and_Positive_regulation_of_RNA_biosynthetic_process

description:
  Mixed, incl. Negative regulation of cell differentiation, and Positive regulation of RNA biosynthetic process


id: CL:212
description: Ammonia-lyase activity, and L-phosphoserine phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:212_Ammonia-lyase_activity,_and_L-phosphoserine_phosphatase_activity


id: CL:2125
description: Mixed, incl. Type II/IV secretion system protein, and Rhomboid family
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2125_Mixed,_incl._Type_II/IV_secretion_system_protein,_and_Rhomboid_family


id: CL:2128
description: Mixed, incl. Suppression of apoptosis, and Forkhead associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2128_Mixed,_incl._Suppression_of_apoptosis,_and_Forkhead_associated_domain


id: CL:2149
description: Mixed, incl. Bacterial nucleoid, and Periplasmic space
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2149_Mixed,_incl._Bacterial_nucleoid,_and_Periplasmic_space


id: CL:2150
description: Mixed, incl. Periplasmic space, and Porin activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2150_Mixed,_incl._Periplasmic_space,_and_Porin_activity


id: CL:2151
description: Mixed, incl. Periplasmic space, and Porin activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2151_Mixed,_incl._Periplasmic_space,_and_Porin_activity


id: CL:2166
description: Mixed, incl. Stage II sporulation protein, and Bacterial Ig-like domain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2166_Mixed,_incl._Stage_II_sporulation_protein,_and_Bacterial_Ig-like_domain_2


id: CL:2175
description: Bacterial nucleoid, and Sister chromatid cohesion
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2175_Bacterial_nucleoid,_and_Sister_chromatid_cohesion


id: CL:2194
description: Mixed, incl. Coenzyme A metabolic process, and TRAM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2194_Mixed,_incl._Coenzyme_A_metabolic_process,_and_TRAM_domain


id: CL:2197
description: Mixed, incl. TRAM domain, and Phosphatidylglycerol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2197_Mixed,_incl._TRAM_domain,_and_Phosphatidylglycerol_metabolic_process


id: CL:2212
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2212_Coenzyme_A_metabolic_process,_and_ATP-dependent_DNA_helicase_RecG/Transcription-repair-coupling_factor

description:
  Coenzyme A metabolic process, and ATP-dependent DNA helicase RecG/Transcription-repair-coupling factor


id: CL:2223
description: tRNA threonylcarbamoyladenosine modification, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2223_tRNA_threonylcarbamoyladenosine_modification,_and_Acetyltransferase_(GNAT)_domain


id: CL:2239
description: Mixed, incl. STAS domain, and Lactate oxidation
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2239_Mixed,_incl._STAS_domain,_and_Lactate_oxidation


id: CL:2253
description: Mixed, incl. Cell wall macromolecule catabolic process, and protein-DNA complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2253_Mixed,_incl._Cell_wall_macromolecule_catabolic_process,_and_protein-DNA_complex


id: CL:2255
description: Mixed, incl. N-acetylmuramoyl-L-alanine amidase, catalytic domain, and GtrA-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2255_Mixed,_incl._N-acetylmuramoyl-L-alanine_amidase,_catalytic_domain,_and_GtrA-like_protein


id: CL:2257
description: N-acetylmuramoyl-L-alanine amidase, catalytic domain, and Transglutaminase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2257_N-acetylmuramoyl-L-alanine_amidase,_catalytic_domain,_and_Transglutaminase-like


id: CL:2282
description: Mixed, incl. WYL domain, and Xylanase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2282_Mixed,_incl._WYL_domain,_and_Xylanase_activity


id: CL:229
description: Sulfur amino acid metabolic process, and Aminotransferase, class I/classII
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:229_Sulfur_amino_acid_metabolic_process,_and_Aminotransferase,_class_I/classII


id: CL:2297
description: Mixed, incl. Protein glycosylation, and 6-hydroxymethylpterin diphosphokinase MptE-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2297_Mixed,_incl._Protein_glycosylation,_and_6-hydroxymethylpterin_diphosphokinase_MptE-like


id: CL:231
description: S-methyltransferase activity, and One-carbon metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:231_S-methyltransferase_activity,_and_One-carbon_metabolic_process


id: CL:2310
description: Mixed, incl. Lipid degradation, and K Homology domain, type 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2310_Mixed,_incl._Lipid_degradation,_and_K_Homology_domain,_type_1


id: CL:2312
description: Mixed, incl. Lipid degradation, and O-methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2312_Mixed,_incl._Lipid_degradation,_and_O-methyltransferase_activity


id: CL:2337
description: Phosphate ion transport, and Nitrogen regulatory protein PII, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2337_Phosphate_ion_transport,_and_Nitrogen_regulatory_protein_PII,_conserved_site


id: CL:2369
description: Mixed, incl. Phosphonate and phosphinate metabolism, and MobA-like NTP transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2369_Mixed,_incl._Phosphonate_and_phosphinate_metabolism,_and_MobA-like_NTP_transferase


id: CL:2390
description: Mixed, incl. Cell differentiation, and Polysaccharide biosynthesis C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2390_Mixed,_incl._Cell_differentiation,_and_Polysaccharide_biosynthesis_C-terminal_domain


id: CL:2391
description: Mixed, incl. Cell differentiation, and Polysaccharide biosynthesis C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2391_Mixed,_incl._Cell_differentiation,_and_Polysaccharide_biosynthesis_C-terminal_domain


id: CL:2393
description: Cell differentiation, and RNA polymerase sigma-B/F/G type
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2393_Cell_differentiation,_and_RNA_polymerase_sigma-B/F/G_type


id: CL:2394
description: Cell differentiation, and RNA polymerase sigma-B/F/G type
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2394_Cell_differentiation,_and_RNA_polymerase_sigma-B/F/G_type


id: CL:2401
description: Cell differentiation, and RNA polymerase sigma-B/F/G type
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2401_Cell_differentiation,_and_RNA_polymerase_sigma-B/F/G_type


id: CL:2402
description: Mixed, incl. Endospore-forming forespore, and RNA polymerase sigma-70 region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2402_Mixed,_incl._Endospore-forming_forespore,_and_RNA_polymerase_sigma-70_region_4


id: CL:2404
description: Mixed, incl. SpoVT-AbrB domain, and Asexual sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2404_Mixed,_incl._SpoVT-AbrB_domain,_and_Asexual_sporulation


id: CL:2423
description: Mixed, incl. SpoVA, and STAS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2423_Mixed,_incl._SpoVA,_and_STAS_domain


id: CL:2436
description: Mixed, incl. Peptidase HybD-like domain superfamily, and DNA topological change
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2436_Mixed,_incl._Peptidase_HybD-like_domain_superfamily,_and_DNA_topological_change


id: CL:2449
description: Stage III sporulation protein AC/AD family, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2449_Stage_III_sporulation_protein_AC/AD_family,_and_Sporulation


id: CL:245
description: Cysteine metabolic process, and Peptidase M20
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:245_Cysteine_metabolic_process,_and_Peptidase_M20


id: CL:2473
description: Mixed, incl. CspA-like domain, and Lysin motif
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2473_Mixed,_incl._CspA-like_domain,_and_Lysin_motif


id: CL:2494
description: Endospore-forming forespore, and Ribosomal protein S13-like, H2TH
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2494_Endospore-forming_forespore,_and_Ribosomal_protein_S13-like,_H2TH


id: CL:2507
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2507_Mostly_uncharacterized,_incl._DNA_catabolic_process,_and_Polysaccharide_biosynthesis_C-terminal_domain

description:
  Mostly uncharacterized, incl. DNA catabolic process, and Polysaccharide biosynthesis C-terminal domain


id: CL:2508
description: Mixed, incl. Polysaccharide biosynthesis C-terminal domain, and RmlC-like jelly roll fold
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2508_Mixed,_incl._Polysaccharide_biosynthesis_C-terminal_domain,_and_RmlC-like_jelly_roll_fold


id: CL:2512
description: Mixed, incl. Phosphodiester glycosidase, and Membrane component of ABC transporter, predicted
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2512_Mixed,_incl._Phosphodiester_glycosidase,_and_Membrane_component_of_ABC_transporter,_predicted


id: CL:2528
description: Mixed, incl. Hexapeptide repeat, and Cell aggregation
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2528_Mixed,_incl._Hexapeptide_repeat,_and_Cell_aggregation


id: CL:2538
description: Mixed, incl. DNA catabolic process, and NusB family
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2538_Mixed,_incl._DNA_catabolic_process,_and_NusB_family


id: CL:2552
description: Mostly uncharacterized, incl. ATP cone domain, and Peptidase S8, subtilisin, His-active site
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2552_Mostly_uncharacterized,_incl._ATP_cone_domain,_and_Peptidase_S8,_subtilisin,_His-active_site


id: CL:2554
description: Mixed, incl. ATP cone domain, and Haloacid dehalogenase-like hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2554_Mixed,_incl._ATP_cone_domain,_and_Haloacid_dehalogenase-like_hydrolase


id: CL:2573
description: Mixed, incl. Sulfur relay system, and Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2573_Mixed,_incl._Sulfur_relay_system,_and_Chromosome_segregation


id: CL:2574
description: Mixed, incl. Sulfur relay system, and UmuC domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2574_Mixed,_incl._Sulfur_relay_system,_and_UmuC_domain


id: CL:2575
description: Mixed, incl. Sulfur relay system, and UmuC domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2575_Mixed,_incl._Sulfur_relay_system,_and_UmuC_domain


id: CL:258
description: Phenylalanine, tyrosine and tryptophan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:258_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis


id: CL:2593
description: Mixed, incl. Amino acid:cation symporter activity, and SpoU rRNA Methylase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2593_Mixed,_incl._Amino_acid:cation_symporter_activity,_and_SpoU_rRNA_Methylase_family


id: CL:2602
description: Mixed, incl. Met-10+ like-protein, and Biosynthesis of ansamycins
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2602_Mixed,_incl._Met-10+_like-protein,_and_Biosynthesis_of_ansamycins


id: CL:2604
description: Mixed, incl. Met-10+ like-protein, and Radical SAM superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2604_Mixed,_incl._Met-10+_like-protein,_and_Radical_SAM_superfamily


id: CL:2621
description: Mixed, incl. Chromosome partition, and Sulfurtransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2621_Mixed,_incl._Chromosome_partition,_and_Sulfurtransferase_activity


id: CL:2623
description: Sulfurtransferase activity, and Aminopeptidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2623_Sulfurtransferase_activity,_and_Aminopeptidase


id: CL:2640
description: Mixed, incl. Polysaccharide biosynthetic process, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2640_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Nucleotide-diphospho-sugar_transferases


id: CL:2641
description: Mixed, incl. Polysaccharide biosynthetic process, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2641_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Nucleotide-diphospho-sugar_transferases


id: CL:2642
description: Mixed, incl. Polysaccharide biosynthetic process, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2642_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Nucleotide-diphospho-sugar_transferases


id: CL:2643
description: Mixed, incl. Polysaccharide biosynthetic process, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2643_Mixed,_incl._Polysaccharide_biosynthetic_process,_and_Nucleotide-diphospho-sugar_transferases


id: CL:2644
description: Mixed, incl. Nucleotide-diphospho-sugar transferases, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2644_Mixed,_incl._Nucleotide-diphospho-sugar_transferases,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:2645
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyltransferase 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2645_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyltransferase_2-like


id: CL:2646
description: Mixed, incl. Polyketide sugar unit biosynthesis, and Glycosyltransferase 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2646_Mixed,_incl._Polyketide_sugar_unit_biosynthesis,_and_Glycosyltransferase_2-like


id: CL:2647
description: Mixed, incl. Polyketide sugar unit biosynthesis, and Glycosyltransferase 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2647_Mixed,_incl._Polyketide_sugar_unit_biosynthesis,_and_Glycosyltransferase_2-like


id: CL:2650
description: Mixed, incl. Polyketide sugar unit biosynthesis, and Glycosyltransferase like family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2650_Mixed,_incl._Polyketide_sugar_unit_biosynthesis,_and_Glycosyltransferase_like_family_2


id: CL:2652
description: Polyketide sugar unit biosynthesis, and Glycosyltransferase like family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2652_Polyketide_sugar_unit_biosynthesis,_and_Glycosyltransferase_like_family_2


id: CL:2685
description: Mixed, incl. Phosphorus-oxygen lyase activity, and Regulation of molecular function
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2685_Mixed,_incl._Phosphorus-oxygen_lyase_activity,_and_Regulation_of_molecular_function


id: CL:2695
description: Mixed, incl. Quinone metabolic process, and 3-beta hydroxysteroid dehydrogenase/isomerase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2695_Mixed,_incl._Quinone_metabolic_process,_and_3-beta_hydroxysteroid_dehydrogenase/isomerase_family


id: CL:2697
description: 3-beta hydroxysteroid dehydrogenase/isomerase family, and DegT/DnrJ/EryC1/StrS aminotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2697_3-beta_hydroxysteroid_dehydrogenase/isomerase_family,_and_DegT/DnrJ/EryC1/StrS_aminotransferase


id: CL:2709
description: Quinone metabolic process, and Glycosyl transferase family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2709_Quinone_metabolic_process,_and_Glycosyl_transferase_family_2


id: CL:2718
description: Mixed, incl. LicD family, and ABC-2 transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2718_Mixed,_incl._LicD_family,_and_ABC-2_transporter


id: CL:2721
description: LicD family, and Cytidylyltransferase IspD/TarI
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2721_LicD_family,_and_Cytidylyltransferase_IspD/TarI


id: CL:2737
description: Mixed, incl. Lipopolysaccharide biosynthesis, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2737_Mixed,_incl._Lipopolysaccharide_biosynthesis,_and_Polysaccharide_biosynthetic_process


id: CL:2738
description: Lipopolysaccharide biosynthesis, and Polysaccharide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2738_Lipopolysaccharide_biosynthesis,_and_Polysaccharide_biosynthetic_process


id: CL:2740
description: Mixed, incl. Lipopolysaccharide biosynthesis, and Protein tyrosine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2740_Mixed,_incl._Lipopolysaccharide_biosynthesis,_and_Protein_tyrosine_kinase_activity


id: CL:2741
description: Lipopolysaccharide biosynthesis, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2741_Lipopolysaccharide_biosynthesis,_and_Acetyltransferase_(GNAT)_domain


id: CL:2743
description: Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2743_Lipopolysaccharide_biosynthesis


id: CL:2761
description: Mixed, incl. Protein tyrosine kinase activity, and DegT/DnrJ/EryC1/StrS aminotransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2761_Mixed,_incl._Protein_tyrosine_kinase_activity,_and_DegT/DnrJ/EryC1/StrS_aminotransferase


id: CL:2784
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2784_Mixed,_incl._SGNH_hydrolase-type_esterase_domain,_and_Bacterial_transferase_hexapeptide_(six_repeats)

description:
  Mixed, incl. SGNH hydrolase-type esterase domain, and Bacterial transferase hexapeptide (six repeats)


id: CL:2795
description: Bacterial membrane protein YfhO, and GtrA-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2795_Bacterial_membrane_protein_YfhO,_and_GtrA-like_protein


id: CL:2809
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2809_Mixed,_incl._Rubrerythrin,_and_Flagellum_site-determining_protein_YlxH/_Fe-S_cluster_assembling_factor_NBP35

description:
  Mixed, incl. Rubrerythrin, and Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35


id: CL:2818
description: Mixed, incl. NodB homology domain, and Flagellar assembly protein A
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2818_Mixed,_incl._NodB_homology_domain,_and_Flagellar_assembly_protein_A


id: CL:2820
description: Mixed, incl. Flagellar assembly protein A, and Iron-sulfur cluster-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2820_Mixed,_incl._Flagellar_assembly_protein_A,_and_Iron-sulfur_cluster-binding_domain


id: CL:2836
description: Mixed, incl. NodB homology domain, and Glycosyltransferase like family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2836_Mixed,_incl._NodB_homology_domain,_and_Glycosyltransferase_like_family_2


id: CL:2847
description: Mixed, incl. Electron transport, and Base excision repair
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2847_Mixed,_incl._Electron_transport,_and_Base_excision_repair


id: CL:2849
description: Mixed, incl. Electron transport, and Holliday junction helicase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2849_Mixed,_incl._Electron_transport,_and_Holliday_junction_helicase_complex


id: CL:2867
description: Mixed, incl. Holliday junction helicase complex, and ACT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2867_Mixed,_incl._Holliday_junction_helicase_complex,_and_ACT_domain


id: CL:2880
description: Base-excision repair, and Exodeoxyribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2880_Base-excision_repair,_and_Exodeoxyribonuclease_activity


id: CL:2898
description: Mixed, incl. Hydrolase activity, hydrolyzing O-glycosyl compounds, and Transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2898_Mixed,_incl._Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds,_and_Transport


id: CL:2899
description: Mixed, incl. Hydrolase activity, hydrolyzing O-glycosyl compounds, and Transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2899_Mixed,_incl._Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds,_and_Transport


id: CL:2900
description: Mixed, incl. Hydrolase activity, hydrolyzing O-glycosyl compounds, and Transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2900_Mixed,_incl._Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds,_and_Transport


id: CL:2901
description: Mixed, incl. Hydrolase activity, hydrolyzing O-glycosyl compounds, and Carbohydrate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2901_Mixed,_incl._Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds,_and_Carbohydrate_transport


id: CL:2902
description: Mixed, incl. Hydrolase activity, hydrolyzing O-glycosyl compounds, and Carbohydrate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2902_Mixed,_incl._Hydrolase_activity,_hydrolyzing_O-glycosyl_compounds,_and_Carbohydrate_transport


id: CL:2903
description: Mixed, incl. Glycoside hydrolase superfamily, and Carbohydrate transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2903_Mixed,_incl._Glycoside_hydrolase_superfamily,_and_Carbohydrate_transmembrane_transporter_activity


id: CL:2904
description: Starch and sucrose metabolism, and Carbohydrate transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2904_Starch_and_sucrose_metabolism,_and_Carbohydrate_transmembrane_transporter_activity


id: CL:2906
description: Mixed, incl. Carbohydrate transmembrane transporter activity, and Carbohydrate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2906_Mixed,_incl._Carbohydrate_transmembrane_transporter_activity,_and_Carbohydrate_transport


id: CL:2908
description: Carbohydrate transmembrane transporter activity, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2908_Carbohydrate_transmembrane_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein


id: CL:2911
description: MetI-like superfamily, and Molybdate/tungstate binding, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2911_MetI-like_superfamily,_and_Molybdate/tungstate_binding,_C-terminal


id: CL:292
description: Mixed, incl. Lipid metabolic process, and Pyruvate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:292_Mixed,_incl._Lipid_metabolic_process,_and_Pyruvate_metabolism


id: CL:2927
description: Carbohydrate transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2927_Carbohydrate_transmembrane_transporter_activity


id: CL:293
description: Mixed, incl. Pyruvate metabolism, and Aerobic respiration
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:293_Mixed,_incl._Pyruvate_metabolism,_and_Aerobic_respiration


id: CL:294
description: Mixed, incl. 4Fe-4S ferredoxin-type, iron-sulphur binding domain, and Propanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:294_Mixed,_incl._4Fe-4S_ferredoxin-type,_iron-sulphur_binding_domain,_and_Propanoate_metabolism


id: CL:2942
description: Mixed, incl. Histidine kinase, and Fucose metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2942_Mixed,_incl._Histidine_kinase,_and_Fucose_metabolic_process


id: CL:295
description: Mixed, incl. Butyrate metabolic process, and Propanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:295_Mixed,_incl._Butyrate_metabolic_process,_and_Propanoate_metabolism


id: CL:2955
description: Glycosyl hydrolase, family 13, catalytic domain, and Glycogen metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2955_Glycosyl_hydrolase,_family_13,_catalytic_domain,_and_Glycogen_metabolic_process


id: CL:2958
description: Glycogen metabolic process, and Carbohydrate phosphorylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2958_Glycogen_metabolic_process,_and_Carbohydrate_phosphorylase


id: CL:296
description: Butyrate metabolic process, and Taurine and hypotaurine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:296_Butyrate_metabolic_process,_and_Taurine_and_hypotaurine_metabolism


id: CL:2961
description: Carboxysome, and Carbohydrate phosphorylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2961_Carboxysome,_and_Carbohydrate_phosphorylase


id: CL:298
description: Butyrate metabolic process, and Electron transfer flavoprotein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:298_Butyrate_metabolic_process,_and_Electron_transfer_flavoprotein_domain


id: CL:2993
description: Mixed, incl. Galactose metabolism, and DNA binding HTH domain, AraC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2993_Mixed,_incl._Galactose_metabolism,_and_DNA_binding_HTH_domain,_AraC-type


id: CL:2994
description: Galactose metabolism, and Sodium/solute symporter superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2994_Galactose_metabolism,_and_Sodium/solute_symporter_superfamily


id: CL:2995
description: Galactose metabolic process, and Sphingolipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:2995_Galactose_metabolic_process,_and_Sphingolipid_metabolism


id: CL:3015
description: Mixed, incl. Beta-galactosidase, domain 4, and MFS transporter superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3015_Mixed,_incl._Beta-galactosidase,_domain_4,_and_MFS_transporter_superfamily


id: CL:3028
description: DNA binding HTH domain, AraC-type, and GntR, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3028_DNA_binding_HTH_domain,_AraC-type,_and_GntR,_C-terminal


id: CL:3032
description: Transcription regulator HTH-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3032_Transcription_regulator_HTH-like


id: CL:3054
description: Mixed, incl. Glycosidase, and Biosynthesis of unsaturated fatty acids
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3054_Mixed,_incl._Glycosidase,_and_Biosynthesis_of_unsaturated_fatty_acids


id: CL:3055
description: Mixed, incl. Glycosidase, and CAP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3055_Mixed,_incl._Glycosidase,_and_CAP_domain


id: CL:3056
description: Mixed, incl. Glycosidase, and Glycosyl hydrolase 94
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3056_Mixed,_incl._Glycosidase,_and_Glycosyl_hydrolase_94


id: CL:3057
description: Mixed, incl. Glycoside hydrolase, family 5, and Glycosyl hydrolase 94
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3057_Mixed,_incl._Glycoside_hydrolase,_family_5,_and_Glycosyl_hydrolase_94


id: CL:3059
description: Glycoside hydrolase, family 5, and Glycosyl hydrolase 94
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3059_Glycoside_hydrolase,_family_5,_and_Glycosyl_hydrolase_94


id: CL:3072
description: Glycosyl hydrolases family 43, and Fibronectin type 3 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3072_Glycosyl_hydrolases_family_43,_and_Fibronectin_type_3_domain


id: CL:3082
description: Mixed, incl. Oxidoreductase activity, acting on peroxide as acceptor, and Galactose mutarotase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3082_Mixed,_incl._Oxidoreductase_activity,_acting_on_peroxide_as_acceptor,_and_Galactose_mutarotase-like


id: CL:3094
description: Mixed, incl. CAP domain, and Collagen triple helix repeat
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3094_Mixed,_incl._CAP_domain,_and_Collagen_triple_helix_repeat


id: CL:3108
description: Pantothenate metabolic process, and Esterase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3108_Pantothenate_metabolic_process,_and_Esterase-like


id: CL:3117
description: Mixed, incl. Potassium ion transport, and Type 1 protein exporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3117_Mixed,_incl._Potassium_ion_transport,_and_Type_1_protein_exporter


id: CL:3119
description: Potassium ion transport, and Type 1 protein exporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3119_Potassium_ion_transport,_and_Type_1_protein_exporter


id: CL:3142
description: Mixed, incl. Queuosine metabolic process, and TraX
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3142_Mixed,_incl._Queuosine_metabolic_process,_and_TraX


id: CL:3144
description: Queuosine biosynthesis, and Queuosine salvage
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3144_Queuosine_biosynthesis,_and_Queuosine_salvage


id: CL:3163
description: Mixed, incl. Cof family, and Rhomboid family
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3163_Mixed,_incl._Cof_family,_and_Rhomboid_family


id: CL:317
description: Mixed, incl. Alcohol dehydrogenase, iron-type, conserved site, and Glycine radical
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:317_Mixed,_incl._Alcohol_dehydrogenase,_iron-type,_conserved_site,_and_Glycine_radical


id: CL:3175
description: Mixed, incl. YegS/DAGK, C-terminal domain, and Suppression of autophagy
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3175_Mixed,_incl._YegS/DAGK,_C-terminal_domain,_and_Suppression_of_autophagy


id: CL:3193
description: Mixed, incl. FAD dependent protein, and Uracil DNA N-glycosylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3193_Mixed,_incl._FAD_dependent_protein,_and_Uracil_DNA_N-glycosylase_activity


id: CL:3209
description: Mixed, incl. Ion transport, and Thiamine biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3209_Mixed,_incl._Ion_transport,_and_Thiamine_biosynthetic_process


id: CL:3210
description: Mixed, incl. ATPase-coupled cation transmembrane transporter activity, and Metal ion homeostasis
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3210_Mixed,_incl._ATPase-coupled_cation_transmembrane_transporter_activity,_and_Metal_ion_homeostasis


id: CL:3211
description: Mixed, incl. P-type ATPase, subfamily IB, and Metal ion homeostasis
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3211_Mixed,_incl._P-type_ATPase,_subfamily_IB,_and_Metal_ion_homeostasis


id: CL:3212
description: Mixed, incl. Metal ion homeostasis, and Ferrous iron transporter FeoA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3212_Mixed,_incl._Metal_ion_homeostasis,_and_Ferrous_iron_transporter_FeoA_domain


id: CL:3213
description: Metal ion homeostasis, and Ferrous iron transporter FeoA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3213_Metal_ion_homeostasis,_and_Ferrous_iron_transporter_FeoA_domain


id: CL:3222
description: Mixed, incl. Phosphoenolpyruvate carboxykinase activity, and P-type ATPase, subfamily IB
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3222_Mixed,_incl._Phosphoenolpyruvate_carboxykinase_activity,_and_P-type_ATPase,_subfamily_IB


id: CL:3232
description: Heavy metal-associated domain, HMA, and ArsR-like helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3232_Heavy_metal-associated_domain,_HMA,_and_ArsR-like_helix-turn-helix_domain


id: CL:3246
description: Mixed, incl. Zinc-ribbon domain, and Transglutaminase-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3246_Mixed,_incl._Zinc-ribbon_domain,_and_Transglutaminase-like_superfamily


id: CL:3259
description: Mixed, incl. Thiamine biosynthetic process, and Peptidase M20
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3259_Mixed,_incl._Thiamine_biosynthetic_process,_and_Peptidase_M20


id: CL:3260
description: Mixed, incl. Thiamine biosynthetic process, and Peptidase M20
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3260_Mixed,_incl._Thiamine_biosynthetic_process,_and_Peptidase_M20


id: CL:3262
description: Thiamine biosynthetic process, and Nucleobase transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3262_Thiamine_biosynthetic_process,_and_Nucleobase_transport


id: CL:328
description: 4Fe-4S ferredoxin-type, iron-sulphur binding domain, and Oxidoreductase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:328_4Fe-4S_ferredoxin-type,_iron-sulphur_binding_domain,_and_Oxidoreductase_complex


id: CL:3280
description: Mixed, incl. AsnC-type HTH domain, and PurM-like, N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3280_Mixed,_incl._AsnC-type_HTH_domain,_and_PurM-like,_N-terminal_domain


id: CL:3290
description: ABC transporters, and Peptidase M23
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3290_ABC_transporters,_and_Peptidase_M23


id: CL:3291
description: ABC transporters, and PmbA/TldA metallopeptidase domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3291_ABC_transporters,_and_PmbA/TldA_metallopeptidase_domain_1


id: CL:3292
description: ABC transporters, and PmbA/TldA metallopeptidase domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3292_ABC_transporters,_and_PmbA/TldA_metallopeptidase_domain_1


id: CL:3294
description: Mixed, incl. MacB, ATP-binding domain, and ABC-type polyamine transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3294_Mixed,_incl._MacB,_ATP-binding_domain,_and_ABC-type_polyamine_transporter_activity


id: CL:3295
description: Mixed, incl. MacB, ATP-binding domain, and ABC3 transporter permease protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3295_Mixed,_incl._MacB,_ATP-binding_domain,_and_ABC3_transporter_permease_protein_domain


id: CL:3296
description: MacB, ATP-binding domain, and ABC3 transporter permease protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3296_MacB,_ATP-binding_domain,_and_ABC3_transporter_permease_protein_domain


id: CL:3299
description: Cell inner membrane, and Membrane component of ABC transporter, predicted
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3299_Cell_inner_membrane,_and_Membrane_component_of_ABC_transporter,_predicted


id: CL:331
description: 4Fe-4S ferredoxin, iron-sulphur binding, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:331_4Fe-4S_ferredoxin,_iron-sulphur_binding,_conserved_site


id: CL:3321
description: Mixed, incl. MacB, ATP-binding domain, and Enzyme regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3321_Mixed,_incl._MacB,_ATP-binding_domain,_and_Enzyme_regulator_activity


id: CL:3331
description: ABC-type polyamine transporter activity, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3331_ABC-type_polyamine_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein


id: CL:3352
description: Amino acid transport, and Ligand-gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3352_Amino_acid_transport,_and_Ligand-gated_channel_activity


id: CL:3354
description: ABC transporter, permease, and Periplasmic space
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3354_ABC_transporter,_permease,_and_Periplasmic_space


id: CL:3364
description: Ligand-gated channel activity, and Amino acid ABC transporter, permease protein, 3-TM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3364_Ligand-gated_channel_activity,_and_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain


id: CL:3378
description: Mixed, incl. ABC-2 family transporter protein, and ABC transporter-like, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3378_Mixed,_incl._ABC-2_family_transporter_protein,_and_ABC_transporter-like,_ATP-binding_domain


id: CL:3379
description: Mixed, incl. ABC-type transporter activity, and PmbA/TldA metallopeptidase domain 1
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3379_Mixed,_incl._ABC-type_transporter_activity,_and_PmbA/TldA_metallopeptidase_domain_1


id: CL:3381
description: Mixed, incl. PmbA/TldA metallopeptidase domain 1, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3381_Mixed,_incl._PmbA/TldA_metallopeptidase_domain_1,_and_ABC-2_family_transporter_protein


id: CL:3383
description: Mixed, incl. PmbA/TldA metallopeptidase domain 1, and P-type ion transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3383_Mixed,_incl._PmbA/TldA_metallopeptidase_domain_1,_and_P-type_ion_transporter_activity


id: CL:3409
description: Mixed, incl. Type 1 protein exporter, and Phospholipase D-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3409_Mixed,_incl._Type_1_protein_exporter,_and_Phospholipase_D-like_domain


id: CL:3411
description: Mixed, incl. Phospholipase D-like domain, and ABC-type transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3411_Mixed,_incl._Phospholipase_D-like_domain,_and_ABC-type_transporter_activity


id: CL:3428
description: Mixed, incl. ABC-2 family transporter protein, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3428_Mixed,_incl._ABC-2_family_transporter_protein,_and_Methyltransferase_domain


id: CL:3430
description: Transcriptional regulator TetR, C-terminal, Firmicutes type, and Transmembrane transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3430_Transcriptional_regulator_TetR,_C-terminal,_Firmicutes_type,_and_Transmembrane_transport


id: CL:3443
description: ABC-2 family transporter protein, and Helix_turn_helix, Lux Regulon
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3443_ABC-2_family_transporter_protein,_and_Helix_turn_helix,_Lux_Regulon


id: CL:3454
description: Mixed, incl. SsuA/THI5-like, and MetI-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3454_Mixed,_incl._SsuA/THI5-like,_and_MetI-like_superfamily


id: CL:3456
description: Mixed, incl. NMT1/THI5 like, and Nucleus
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3456_Mixed,_incl._NMT1/THI5_like,_and_Nucleus


id: CL:3485
description: Mixed, incl. Peptidase M23, and PDZ domain 6
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3485_Mixed,_incl._Peptidase_M23,_and_PDZ_domain_6


id: CL:3486
description: Peptidase M23, and PDZ domain 6
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3486_Peptidase_M23,_and_PDZ_domain_6


id: CL:349
description: Mixed, incl. Citrate cycle (TCA cycle), and malonyl-CoA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:349_Mixed,_incl._Citrate_cycle_(TCA_cycle),_and_malonyl-CoA_metabolic_process


id: CL:3497
description: Mixed, incl. ABC transporter-like, conserved site, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3497_Mixed,_incl._ABC_transporter-like,_conserved_site,_and_Signal


id: CL:3509
description: Mostly uncharacterized, incl. Lambda repressor-like, DNA-binding domain superfamily, and Chromosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3509_Mostly_uncharacterized,_incl._Lambda_repressor-like,_DNA-binding_domain_superfamily,_and_Chromosome


id: CL:3510
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3510_Mostly_uncharacterized,_incl._Sigma-70,_region_4,_and_Immunoprotective_extracellular,_immunoglobulin-like_domain_superfamily

description:
  Mostly uncharacterized, incl. Sigma-70, region 4, and Immunoprotective extracellular, immunoglobulin-like domain superfamily


id: CL:3511
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3511_Mostly_uncharacterized,_incl._Sigma-70,_region_4,_and_Immunoprotective_extracellular,_immunoglobulin-like_domain_superfamily

description:
  Mostly uncharacterized, incl. Sigma-70, region 4, and Immunoprotective extracellular, immunoglobulin-like domain superfamily


id: CL:3513
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3513_Mixed,_incl._Immunoprotective_extracellular,_immunoglobulin-like_domain_superfamily,_and_Helix-turn-helix_XRE-family_like_proteins

description:
  Mixed, incl. Immunoprotective extracellular, immunoglobulin-like domain superfamily, and Helix-turn-helix XRE-family like proteins


id: CL:352
description: Benzoate degradation, and Acetyl-CoA carboxylase
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:352_Benzoate_degradation,_and_Acetyl-CoA_carboxylase


id: CL:3534
description: Mixed, incl. DNA alkylation, and DNA breaking-rejoining enzyme, catalytic core
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3534_Mixed,_incl._DNA_alkylation,_and_DNA_breaking-rejoining_enzyme,_catalytic_core


id: CL:3544
description: Mostly uncharacterized, incl. Porin activity, and DNA primase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3544_Mostly_uncharacterized,_incl._Porin_activity,_and_DNA_primase_activity


id: CL:3547
description: Mixed, incl. DNA primase activity, and Helix-turn-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3547_Mixed,_incl._DNA_primase_activity,_and_Helix-turn-helix


id: CL:3571
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3571_Mixed,_incl._Deoxyxylulose-5-phosphate_synthase,_and_Aspartyl/glutamyl-tRNA_amidotransferase_subunit_B-like

description:
  Mixed, incl. Deoxyxylulose-5-phosphate synthase, and Aspartyl/glutamyl-tRNA amidotransferase subunit B-like


id: CL:3584
description: Mixed, incl. Lon protease, and Na+/H+ antiporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3584_Mixed,_incl._Lon_protease,_and_Na+/H+_antiporter_family


id: CL:3604
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3604_Mostly_uncharacterized,_incl._Organonitrogen_compound_catabolic_process,_and_Regulation_of_RNA_biosynthetic_process

description:
  Mostly uncharacterized, incl. Organonitrogen compound catabolic process, and Regulation of RNA biosynthetic process


id: CL:3605
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3605_Mostly_uncharacterized,_incl._Organonitrogen_compound_catabolic_process,_and_Hydrolase_activity,_acting_on_ester_bonds

description:
  Mostly uncharacterized, incl. Organonitrogen compound catabolic process, and Hydrolase activity, acting on ester bonds


id: CL:3606
description: Mostly uncharacterized, incl. TPM domain, and SPFH domain, YdjI-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3606_Mostly_uncharacterized,_incl._TPM_domain,_and_SPFH_domain,_YdjI-like


id: CL:3607
description: Mostly uncharacterized, incl. TPM domain, and SPFH domain, YdjI-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3607_Mostly_uncharacterized,_incl._TPM_domain,_and_SPFH_domain,_YdjI-like


id: CL:3608
description: Mostly uncharacterized, incl. TPM domain, and SPFH domain, YdjI-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3608_Mostly_uncharacterized,_incl._TPM_domain,_and_SPFH_domain,_YdjI-like


id: CL:3609
description: Mixed, incl. TPM domain, and SPFH domain, YdjI-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3609_Mixed,_incl._TPM_domain,_and_SPFH_domain,_YdjI-like


id: CL:3612
description: Mixed, incl. TPM domain, and SPFH domain, YdjI-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3612_Mixed,_incl._TPM_domain,_and_SPFH_domain,_YdjI-like


id: CL:3639
description: Mixed, incl. HicA superfamily, and Methyltransferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3639_Mixed,_incl._HicA_superfamily,_and_Methyltransferase_domain


id: CL:3641
description: Mixed, incl. Methyltransferase domain, and Virulence protein RhuM-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3641_Mixed,_incl._Methyltransferase_domain,_and_Virulence_protein_RhuM-like


id: CL:3659
description: Mixed, incl. Cytolysis, and (Uracil-5)-methyltransferase family
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3659_Mixed,_incl._Cytolysis,_and_(Uracil-5)-methyltransferase_family


id: CL:3668
description: Mostly uncharacterized, incl. Beta-lactamase, and Iron ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3668_Mostly_uncharacterized,_incl._Beta-lactamase,_and_Iron_ion_transport


id: CL:3670
description: Mixed, incl. Beta-lactamase, and Deacetylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3670_Mixed,_incl._Beta-lactamase,_and_Deacetylase_activity


id: CL:3682
description: Mixed, incl. Iron ion transport, and ABC 3 transport family
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3682_Mixed,_incl._Iron_ion_transport,_and_ABC_3_transport_family


id: CL:3691
description: Mixed, incl. Organonitrogen compound catabolic process, and Isoprenoid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3691_Mixed,_incl._Organonitrogen_compound_catabolic_process,_and_Isoprenoid_metabolic_process


id: CL:3692
description: Mixed, incl. Heterocycle catabolic process, and Carotenoid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3692_Mixed,_incl._Heterocycle_catabolic_process,_and_Carotenoid_metabolic_process


id: CL:3694
description: Mixed, incl. Carotenoid metabolic process, and WYL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3694_Mixed,_incl._Carotenoid_metabolic_process,_and_WYL_domain


id: CL:3716
description: Mixed, incl. Alkaloid catabolic process, and MobA-like NTP transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3716_Mixed,_incl._Alkaloid_catabolic_process,_and_MobA-like_NTP_transferase


id: CL:3729
description: Mostly uncharacterized, incl. Glycine radical, and 4Fe-4S single cluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3729_Mostly_uncharacterized,_incl._Glycine_radical,_and_4Fe-4S_single_cluster_domain


id: CL:3730
description: Mostly uncharacterized, incl. Glycine radical, and 4Fe-4S single cluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3730_Mostly_uncharacterized,_incl._Glycine_radical,_and_4Fe-4S_single_cluster_domain


id: CL:3732
description: Mixed, incl. CYTH-like domain superfamily, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3732_Mixed,_incl._CYTH-like_domain_superfamily,_and_Acetyltransferase_(GNAT)_domain


id: CL:3751
description: Mixed, incl. Methyltransferase activity, and Glycosidase
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3751_Mixed,_incl._Methyltransferase_activity,_and_Glycosidase


id: CL:3762
description: Mixed, incl. RNA polymerase sigma factor 70, region 4 type 2, and YqgF/RNase H-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3762_Mixed,_incl._RNA_polymerase_sigma_factor_70,_region_4_type_2,_and_YqgF/RNase_H-like_domain


id: CL:3765
description: Mixed, incl. Sigma factor antagonist activity, and Positive regulation of RNA biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3765_Mixed,_incl._Sigma_factor_antagonist_activity,_and_Positive_regulation_of_RNA_biosynthetic_process


id: CL:3785
description: Mostly uncharacterized, incl. Transposition, and NUDIX hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3785_Mostly_uncharacterized,_incl._Transposition,_and_NUDIX_hydrolase


id: CL:3787
description: Mixed, incl. NUDIX hydrolase, and Transcription cis-regulatory region binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3787_Mixed,_incl._NUDIX_hydrolase,_and_Transcription_cis-regulatory_region_binding


id: CL:3805
description: Mixed, incl. MraW methylase family, and Polyamine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3805_Mixed,_incl._MraW_methylase_family,_and_Polyamine_metabolic_process


id: CL:3819
description: Mixed, incl. CobW/HypB/UreG, nucleotide-binding domain, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3819_Mixed,_incl._CobW/HypB/UreG,_nucleotide-binding_domain,_and_Signal


id: CL:3835
description: Mixed, incl. Acyltransferase, and ABC transporter substrate binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3835_Mixed,_incl._Acyltransferase,_and_ABC_transporter_substrate_binding_protein


id: CL:3836
description: Mixed, incl. ABC transporter substrate binding protein, and Propanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3836_Mixed,_incl._ABC_transporter_substrate_binding_protein,_and_Propanoate_metabolism


id: CL:3838
description: ABC transporter substrate binding protein, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3838_ABC_transporter_substrate_binding_protein,_and_ABC_transporter,_permease


id: CL:384
description: Mixed, incl. Fatty acid metabolism, and Glycerophospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:384_Mixed,_incl._Fatty_acid_metabolism,_and_Glycerophospholipid_metabolism


id: CL:385
description: Fatty acid metabolism, and Lipid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:385_Fatty_acid_metabolism,_and_Lipid_biosynthesis


id: CL:3859
description: Phosphate acyltransferases, and Acyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3859_Phosphate_acyltransferases,_and_Acyltransferase


id: CL:386
description: Fatty acid metabolism, and Phosphopantetheine
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:386_Fatty_acid_metabolism,_and_Phosphopantetheine


id: CL:3870
description: Mixed, incl. Polyol metabolic process, and Peptidase M16C associated
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3870_Mixed,_incl._Polyol_metabolic_process,_and_Peptidase_M16C_associated


id: CL:3872
description: Mixed, incl. Polyol metabolic process, and DNA-binding HTH domain, TetR-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3872_Mixed,_incl._Polyol_metabolic_process,_and_DNA-binding_HTH_domain,_TetR-type


id: CL:3874
description: Polyol metabolic process, and DNA-binding HTH domain, TetR-type
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3874_Polyol_metabolic_process,_and_DNA-binding_HTH_domain,_TetR-type


id: CL:388
description: Fatty acid biosynthetic process, and Short-chain dehydrogenase/reductase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:388_Fatty_acid_biosynthetic_process,_and_Short-chain_dehydrogenase/reductase,_conserved_site


id: CL:390
description: Fatty acid synthase activity, and Short-chain dehydrogenase/reductase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:390_Fatty_acid_synthase_activity,_and_Short-chain_dehydrogenase/reductase,_conserved_site


id: CL:3912
description: Mixed, incl. Anion transmembrane transport, and Peptidase M16C associated
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3912_Mixed,_incl._Anion_transmembrane_transport,_and_Peptidase_M16C_associated


id: CL:3915
description: Mixed, incl. Vitamin transport, and Na+/Pi-cotransporter
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3915_Mixed,_incl._Vitamin_transport,_and_Na+/Pi-cotransporter


id: CL:3939
description: Response to virus, and Domain of unknown function DUF2179
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3939_Response_to_virus,_and_Domain_of_unknown_function_DUF2179


id: CL:3948
description: Mixed, incl. ABC transporter substrate-binding protein PnrA-like, and Cell death
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3948_Mixed,_incl._ABC_transporter_substrate-binding_protein_PnrA-like,_and_Cell_death


id: CL:3949
description: Mixed, incl. ABC transporter substrate-binding protein PnrA-like, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3949_Mixed,_incl._ABC_transporter_substrate-binding_protein_PnrA-like,_and_ABC_transporter,_permease


id: CL:3951
description: Mixed, incl. Fn3 associated, and Ligase activity, forming carbon-sulfur bonds
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3951_Mixed,_incl._Fn3_associated,_and_Ligase_activity,_forming_carbon-sulfur_bonds


id: CL:3963
description: ABC transporter substrate-binding protein PnrA-like, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3963_ABC_transporter_substrate-binding_protein_PnrA-like,_and_ABC_transporter,_permease


id: CL:3977
description: Mixed, incl. Cell death, and GntR, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3977_Mixed,_incl._Cell_death,_and_GntR,_C-terminal


id: CL:3997
description: Mostly uncharacterized, incl. AAA domain, and Lambda repressor-like, DNA-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3997_Mostly_uncharacterized,_incl._AAA_domain,_and_Lambda_repressor-like,_DNA-binding_domain_superfamily


id: CL:3998
description: Mostly uncharacterized, incl. AAA domain, and Homologous recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3998_Mostly_uncharacterized,_incl._AAA_domain,_and_Homologous_recombination


id: CL:3999
description: Mixed, incl. AAA domain, and Lambda repressor-like, DNA-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:3999_Mixed,_incl._AAA_domain,_and_Lambda_repressor-like,_DNA-binding_domain_superfamily


id: CL:4000
description: Mixed, incl. AAA domain, and Lambda repressor-like, DNA-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:4000_Mixed,_incl._AAA_domain,_and_Lambda_repressor-like,_DNA-binding_domain_superfamily


id: CL:4001
description: Mixed, incl. AAA domain, and Toxin-antitoxin complex
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:4001_Mixed,_incl._AAA_domain,_and_Toxin-antitoxin_complex


id: CL:4003
description: Mixed, incl. AAA domain, and Fido domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:4003_Mixed,_incl._AAA_domain,_and_Fido_domain


id: CL:4004
description: Mixed, incl. AAA domain, and Fido domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:4004_Mixed,_incl._AAA_domain,_and_Fido_domain


id: CL:4006
description: AAA domain, group 14, and Fido domain-containing protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:4006_AAA_domain,_group_14,_and_Fido_domain-containing_protein


id: CL:4031
description: Mixed, incl. Protein of unknown function DUF3990, and Protein of unknown function DUF3791
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:4031_Mixed,_incl._Protein_of_unknown_function_DUF3990,_and_Protein_of_unknown_function_DUF3791


id: CL:4047
description: Mixed, incl. Schlafen, AlbA_2 domain, and RecG, C-terminal domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:4047_Mixed,_incl._Schlafen,_AlbA_2_domain,_and_RecG,_C-terminal_domain_superfamily


id: CL:4074
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:4074_Mostly_uncharacterized,_incl._Schlafen,_AlbA_2_domain,_and_AAA_domain,_putative_AbiEii_toxin,_Type_IV_TA_system

description:
  Mostly uncharacterized, incl. Schlafen, AlbA_2 domain, and AAA domain, putative AbiEii toxin, Type IV TA system


id: CL:4075
description: Mixed, incl. Schlafen, AlbA_2 domain, and AAA domain, putative AbiEii toxin, Type IV TA system
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:4075_Mixed,_incl._Schlafen,_AlbA_2_domain,_and_AAA_domain,_putative_AbiEii_toxin,_Type_IV_TA_system


id: CL:4086
description: Mixed, incl. DNA-methyltransferase activity, and Acetyltransferase (GNAT) family
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:4086_Mixed,_incl._DNA-methyltransferase_activity,_and_Acetyltransferase_(GNAT)_family


id: CL:4095
description: Mixed, incl. Membrane organization, and Oxidoreductase activity, acting on a sulfur group of donors
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:4095_Mixed,_incl._Membrane_organization,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: CL:4106
description: Mixed, incl. Vitamin B6 metabolism, and Rubrerythrin
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:4106_Mixed,_incl._Vitamin_B6_metabolism,_and_Rubrerythrin


id: CL:4107
description: Mixed, incl. Vitamin B6 metabolism, and Manganese ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:4107_Mixed,_incl._Vitamin_B6_metabolism,_and_Manganese_ion_transport


id: CL:4108
description: Vitamin B6 metabolism, and 4Fe-4S single cluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:4108_Vitamin_B6_metabolism,_and_4Fe-4S_single_cluster_domain


id: CL:4117
description: Mixed, incl. Manganese ion transport, and Mechanosensitive ion channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:4117_Mixed,_incl._Manganese_ion_transport,_and_Mechanosensitive_ion_channel_activity


id: CL:4126
description: Mixed, incl. Rubrerythrin, and Ferric-uptake regulator, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:4126_Mixed,_incl._Rubrerythrin,_and_Ferric-uptake_regulator,_C-terminal_domain


id: CL:413
description: AMP-dependent synthetase/ligase domain, and Phosphopantetheine attachment site
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:413_AMP-dependent_synthetase/ligase_domain,_and_Phosphopantetheine_attachment_site


id: CL:4136
description: Mixed, incl. DNA integration, and DNA methylation on cytosine
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:4136_Mixed,_incl._DNA_integration,_and_DNA_methylation_on_cytosine


id: CL:414
description: AMP-dependent synthetase/ligase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:414_AMP-dependent_synthetase/ligase_domain


id: CL:4151
description: Mixed, incl. LytTR DNA-binding domain, and Sensor histidine kinase NatK, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:4151_Mixed,_incl._LytTR_DNA-binding_domain,_and_Sensor_histidine_kinase_NatK,_C-terminal_domain


id: CL:4152
description: Mixed, incl. Sensor histidine kinase NatK, C-terminal domain, and LytTR DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:4152_Mixed,_incl._Sensor_histidine_kinase_NatK,_C-terminal_domain,_and_LytTR_DNA-binding_domain


id: CL:4154
description: Mixed, incl. Quorum sensing, and Sensor histidine kinase NatK, C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:4154_Mixed,_incl._Quorum_sensing,_and_Sensor_histidine_kinase_NatK,_C-terminal_domain


id: CL:4176
description: Mixed, incl. Transcriptional regulatory protein LytR-like, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:4176_Mixed,_incl._Transcriptional_regulatory_protein_LytR-like,_and_Signal


id: CL:4188
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:4188_Mostly_uncharacterized,_incl._Domain_of_unknown_function_DUF5050,_and_ABC-2_family_transporter_protein

description:
  Mostly uncharacterized, incl. Domain of unknown function DUF5050, and ABC-2 family transporter protein


id: CL:4200
description: Mixed, incl. Domain of unknown function DUF5050, and ABC-2 family transporter protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:4200_Mixed,_incl._Domain_of_unknown_function_DUF5050,_and_ABC-2_family_transporter_protein


id: CL:4210
description: Mixed, incl. Receptor, and Guanosine tetraphosphate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:4210_Mixed,_incl._Receptor,_and_Guanosine_tetraphosphate_metabolic_process


id: CL:423
description: Phosphopantetheine attachment site, and Serine aminopeptidase, S33
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:423_Phosphopantetheine_attachment_site,_and_Serine_aminopeptidase,_S33


id: CL:435
description: Phospholipid metabolism, and Phospholipid/glycerol acyltransferase
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:435_Phospholipid_metabolism,_and_Phospholipid/glycerol_acyltransferase


id: CL:445
description: Mixed, incl. Lipid degradation, and Manganese ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:445_Mixed,_incl._Lipid_degradation,_and_Manganese_ion_transport


id: CL:459
description: Mixed, incl. Pentose phosphate pathway, and Glycolysis / Gluconeogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:459_Mixed,_incl._Pentose_phosphate_pathway,_and_Glycolysis_/_Gluconeogenesis


id: CL:460
description: Mixed, incl. Pentose phosphate pathway, and Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:460_Mixed,_incl._Pentose_phosphate_pathway,_and_Phosphotransferase_system_(PTS)


id: CL:461
description: Mixed, incl. Pentose phosphate pathway, and Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:461_Mixed,_incl._Pentose_phosphate_pathway,_and_Phosphotransferase_system_(PTS)


id: CL:463
description: Pentose phosphate pathway, and Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:463_Pentose_phosphate_pathway,_and_Phosphotransferase_system_(PTS)


id: CL:465
description: Glycolysis, and Aldehyde-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:465_Glycolysis,_and_Aldehyde-lyase_activity


id: CL:468
description: Glycolysis, and NADPH regeneration
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:468_Glycolysis,_and_NADPH_regeneration


id: CL:47
description: Cellular amino acid metabolic process, and Ribonucleoside monophosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:47_Cellular_amino_acid_metabolic_process,_and_Ribonucleoside_monophosphate_biosynthetic_process


id: CL:470
description: Glycolysis, and Aldehyde-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:470_Glycolysis,_and_Aldehyde-lyase_activity


id: CL:48
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:48_Mixed,_incl._Ribonucleoside_monophosphate_biosynthetic_process,_and_Glutamine_family_amino_acid_metabolic_process

description:
  Mixed, incl. Ribonucleoside monophosphate biosynthetic process, and Glutamine family amino acid metabolic process


id: CL:482
description: Phosphofructokinase, and Glycolysis
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:482_Phosphofructokinase,_and_Glycolysis


id: CL:50
description: Ribonucleoside monophosphate biosynthetic process, and Nitrogen metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:50_Ribonucleoside_monophosphate_biosynthetic_process,_and_Nitrogen_metabolism


id: CL:507
description: Sugar transport, and DeoR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:507_Sugar_transport,_and_DeoR-type_HTH_domain


id: CL:51
description: Ribonucleoside monophosphate biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:51_Ribonucleoside_monophosphate_biosynthetic_process


id: CL:530
description: Mixed, incl. Uridylyltransferase activity, and Alpha-D-phosphohexomutase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:530_Mixed,_incl._Uridylyltransferase_activity,_and_Alpha-D-phosphohexomutase,_C-terminal


id: CL:545
description: Monosaccharide catabolic process, and Cupin 2, conserved barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:545_Monosaccharide_catabolic_process,_and_Cupin_2,_conserved_barrel


id: CL:563
description: Mixed, incl. Pyrimidine nucleotide salvage, and Phosphorylase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:563_Mixed,_incl._Pyrimidine_nucleotide_salvage,_and_Phosphorylase_superfamily


id: CL:565
description: Mixed, incl. UMP salvage, and Phosphorylase superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:565_Mixed,_incl._UMP_salvage,_and_Phosphorylase_superfamily


id: CL:567
description: Mixed, incl. Phosphorylase superfamily, and Metalloenzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:567_Mixed,_incl._Phosphorylase_superfamily,_and_Metalloenzyme


id: CL:601
description: Mixed, incl. Aminoacyl-tRNA synthetase, class II, and Rhodanese Homology Domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:601_Mixed,_incl._Aminoacyl-tRNA_synthetase,_class_II,_and_Rhodanese_Homology_Domain


id: CL:603
description: Mixed, incl. Rhodanese Homology Domain, and Antibiotic biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:603_Mixed,_incl._Rhodanese_Homology_Domain,_and_Antibiotic_biosynthetic_process


id: CL:615
description: Mixed, incl. GAD domain, and Histidyl-tRNA synthetase
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:615_Mixed,_incl._GAD_domain,_and_Histidyl-tRNA_synthetase


id: CL:636
description: Mixed, incl. Translation, and Oxidative phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:636_Mixed,_incl._Translation,_and_Oxidative_phosphorylation


id: CL:637
description: Mixed, incl. Translation, and Oxidative phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:637_Mixed,_incl._Translation,_and_Oxidative_phosphorylation


id: CL:638
description: Translation, and Oxidative phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:638_Translation,_and_Oxidative_phosphorylation


id: CL:639
description: Translation, and Oxidative phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:639_Translation,_and_Oxidative_phosphorylation


id: CL:640
description: Translation, and Oxidative phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:640_Translation,_and_Oxidative_phosphorylation


id: CL:641
description: Translation, and Oxidative phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:641_Translation,_and_Oxidative_phosphorylation


id: CL:642
description: Ribosome, and Oxidative phosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:642_Ribosome,_and_Oxidative_phosphorylation


id: CL:643
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:643_Ribosome,_and_Translation_regulator_activity


id: CL:645
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:645_Ribosome,_and_Translation_regulator_activity


id: CL:647
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:647_Ribosome,_and_Translation_regulator_activity


id: CL:650
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:650_Ribosome,_and_Translation_regulator_activity


id: CL:652
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:652_Ribosome,_and_Translation_regulator_activity


id: CL:656
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:656_Structural_constituent_of_ribosome


id: CL:657
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:657_Structural_constituent_of_ribosome


id: CL:659
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:659_Structural_constituent_of_ribosome


id: CL:660
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:660_Structural_constituent_of_ribosome


id: CL:661
description: Small ribosomal subunit, and Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:661_Small_ribosomal_subunit,_and_Structural_constituent_of_ribosome


id: CL:664
description: Small ribosomal subunit, and rRNA-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:664_Small_ribosomal_subunit,_and_rRNA-binding


id: CL:696
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:696_Structural_constituent_of_ribosome


id: CL:710
description: L28p-like, and Zinc-binding ribosomal protein
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:710_L28p-like,_and_Zinc-binding_ribosomal_protein


id: CL:731
description: rRNA-binding, and 50S ribosomal protein L30e-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:731_rRNA-binding,_and_50S_ribosomal_protein_L30e-like


id: CL:735
description: Large ribosomal subunit, and Large ribosomal subunit rRNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:735_Large_ribosomal_subunit,_and_Large_ribosomal_subunit_rRNA_binding


id: CL:756
description: Ribosomal protein L2, domain 2, and Large ribosomal subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:756_Ribosomal_protein_L2,_domain_2,_and_Large_ribosomal_subunit


id: CL:805
description: Mixed, incl. K Homology domain, type 2, and rRNA (adenine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:805_Mixed,_incl._K_Homology_domain,_type_2,_and_rRNA_(adenine)_methyltransferase_activity


id: CL:832
description: ATP synthesis, and Inorganic diphosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:832_ATP_synthesis,_and_Inorganic_diphosphatase_activity


id: CL:876
description: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:876_Aminoacyl-tRNA_synthetase,_class_Ia,_anticodon-binding


id: CL:894
description: GTP binding domain, and ATP-dependent activity, acting on RNA
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:894_GTP_binding_domain,_and_ATP-dependent_activity,_acting_on_RNA


id: CL:903
description: Mixed, incl. DNA-directed RNA polymerase, and Helicase superfamily c-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:903_Mixed,_incl._DNA-directed_RNA_polymerase,_and_Helicase_superfamily_c-terminal_domain


id: CL:906
description: DNA-directed RNA polymerase, and Phospholipase D-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:906_DNA-directed_RNA_polymerase,_and_Phospholipase_D-like_domain


id: CL:922
description: Guanosine tetraphosphate metabolic process, and RNA polymerase binding
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:922_Guanosine_tetraphosphate_metabolic_process,_and_RNA_polymerase_binding


id: CL:933
description: Mixed, incl. Isoprene biosynthesis, and PDZ domain 6
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:933_Mixed,_incl._Isoprene_biosynthesis,_and_PDZ_domain_6


id: CL:951
description: Mixed, incl. PDZ domain 6, and De novo CTP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:951_Mixed,_incl._PDZ_domain_6,_and_De_novo_CTP_biosynthetic_process


id: CL:964
description: Mixed, incl. Ribosomal small subunit biogenesis, and RNA degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:964_Mixed,_incl._Ribosomal_small_subunit_biogenesis,_and_RNA_degradation


id: CL:965
description: Mixed, incl. Ribosomal small subunit biogenesis, and Initiation factor
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:965_Mixed,_incl._Ribosomal_small_subunit_biogenesis,_and_Initiation_factor


id: CL:967
description: Mixed, incl. Ribosomal small subunit binding, and Initiation factor
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:967_Mixed,_incl._Ribosomal_small_subunit_binding,_and_Initiation_factor


id: CL:979
description: Mixed, incl. Rhomboid-like superfamily, and Class I glutamine amidotransferase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:979_Mixed,_incl._Rhomboid-like_superfamily,_and_Class_I_glutamine_amidotransferase-like


id: CL:98
description: Nitrogen metabolism, and glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:98_Nitrogen_metabolism,_and_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: CL:990
description: Ribosomal protein S1-like RNA-binding domain, and RNA 3-end processing
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:990_Ribosomal_protein_S1-like_RNA-binding_domain,_and_RNA_3-end_processing


id: CL:999
description: Mixed, incl. Protein folding, and Serine-type endopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_1262761_STRINGid_CL:999_Mixed,_incl._Protein_folding,_and_Serine-type_endopeptidase_activity


id: GO:0000716
description: Transcription-coupled nucleotide-excision repair, DNA damage recognition
memo: https://amigo.geneontology.org/amigo/term/GO:0000716
golevel: 10
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0000716_Transcription-coupled_nucleotide-excision_repair,_DNA_damage_recognition


id: GO:0000724
description: Double-strand break repair via homologous recombination
memo: https://amigo.geneontology.org/amigo/term/GO:0000724
golevel: 9
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0000724_Double-strand_break_repair_via_homologous_recombination


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0002926
description: tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation
memo: https://amigo.geneontology.org/amigo/term/GO:0002926
golevel: 13
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0002926_tRNA_wobble_base_5-methoxycarbonylmethyl-2-thiouridinylation


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003871
description: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003871
golevel: 6
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0003871_5-methyltetrahydropteroyltriglutamate-homocysteine_S-methyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0003992
description: N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003992
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0003992_N2-acetyl-L-ornithine:2-oxoglutarate_5-aminotransferase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
golevel: 6
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004471
description: Malate dehydrogenase (decarboxylating) (NAD+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004471
golevel: 6
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0004471_Malate_dehydrogenase_(decarboxylating)_(NAD+)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 6
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004489
description: Methylenetetrahydrofolate reductase (NAD(P)H) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004489
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0004489_Methylenetetrahydrofolate_reductase_(NAD(P)H)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004648
description: O-phospho-L-serine:2-oxoglutarate aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004648
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0004648_O-phospho-L-serine:2-oxoglutarate_aminotransferase_activity


id: GO:0004715
description: Non-membrane spanning protein tyrosine kinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004715
golevel: 7
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0004715_Non-membrane_spanning_protein_tyrosine_kinase_activity


id: GO:0005315
description: Inorganic phosphate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005315
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0005315_Inorganic_phosphate_transmembrane_transporter_activity


id: GO:0005350
description: Pyrimidine nucleobase transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005350
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0005350_Pyrimidine_nucleobase_transmembrane_transporter_activity


id: GO:0005477
description: Pyruvate secondary active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005477
golevel: 7
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0005477_Pyruvate_secondary_active_transmembrane_transporter_activity


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 11
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0008028
description: Monocarboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008028
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0008028_Monocarboxylic_acid_transmembrane_transporter_activity


id: GO:0008108
description: UDP-glucose:hexose-1-phosphate uridylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008108
golevel: 6
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0008108_UDP-glucose:hexose-1-phosphate_uridylyltransferase_activity


id: GO:0008263
description: Pyrimidine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008263
golevel: 7
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0008263_Pyrimidine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0008271
description: Secondary active sulfate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008271
golevel: 6
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0008271_Secondary_active_sulfate_transmembrane_transporter_activity


id: GO:0008444
description: CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008444
golevel: 6
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0008444_CDP-diacylglycerol-glycerol-3-phosphate_3-phosphatidyltransferase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 7
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
golevel: 6
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008765
description: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008765
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0008765_UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0008965
description: Phosphoenolpyruvate-protein phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008965
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0008965_Phosphoenolpyruvate-protein_phosphotransferase_activity


id: GO:0008982
description: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008982
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0008982_protein-N(PI)-phosphohistidine-sugar_phosphotransferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 6
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 9
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 9
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 9
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009157
description: Deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009157
golevel: 9
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0009157_Deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 10
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 9
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 10
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 9
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 10
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 10
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 9
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


id: GO:0009209
description: Pyrimidine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009209
golevel: 10
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0009209_Pyrimidine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009211
description: Pyrimidine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009211
golevel: 9
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0009211_Pyrimidine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009212
description: Pyrimidine deoxyribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009212
golevel: 10
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0009212_Pyrimidine_deoxyribonucleoside_triphosphate_biosynthetic_process


id: GO:0009213
description: Pyrimidine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009213
golevel: 10
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0009213_Pyrimidine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009215
description: Purine deoxyribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009215
golevel: 9
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0009215_Purine_deoxyribonucleoside_triphosphate_metabolic_process


id: GO:0009217
description: Purine deoxyribonucleoside triphosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009217
golevel: 10
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0009217_Purine_deoxyribonucleoside_triphosphate_catabolic_process


id: GO:0009401
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system
memo: https://amigo.geneontology.org/amigo/term/GO:0009401
golevel: 8
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0009401_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system


id: GO:0009678
description: Pyrophosphate hydrolysis-driven proton transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009678
golevel: 6
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0009678_Pyrophosphate_hydrolysis-driven_proton_transmembrane_transporter_activity


id: GO:0010557
description: Positive regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010557
golevel: 6
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0010557_Positive_regulation_of_macromolecule_biosynthetic_process


id: GO:0010558
description: Negative regulation of macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010558
golevel: 6
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0010558_Negative_regulation_of_macromolecule_biosynthetic_process


id: GO:0010604
description: Positive regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010604
golevel: 5
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0010604_Positive_regulation_of_macromolecule_metabolic_process


id: GO:0010605
description: Negative regulation of macromolecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0010605
golevel: 5
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0010605_Negative_regulation_of_macromolecule_metabolic_process


id: GO:0015318
description: Inorganic molecular entity transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015318
golevel: 3
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0015318_Inorganic_molecular_entity_transmembrane_transporter_activity


id: GO:0015355
description: Secondary active monocarboxylate transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015355
golevel: 6
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0015355_Secondary_active_monocarboxylate_transmembrane_transporter_activity


id: GO:0015415
description: ATPase-coupled phosphate ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015415
golevel: 7
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0015415_ATPase-coupled_phosphate_ion_transmembrane_transporter_activity


id: GO:0015451
description: Decarboxylation-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015451
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0015451_Decarboxylation-driven_active_transmembrane_transporter_activity


id: GO:0015453
description: Oxidoreduction-driven active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015453
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0015453_Oxidoreduction-driven_active_transmembrane_transporter_activity


id: GO:0015658
description: Branched-chain amino acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015658
golevel: 6
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0015658_Branched-chain_amino_acid_transmembrane_transporter_activity


id: GO:0015667
description: Site-specific DNA-methyltransferase (cytosine-N4-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0015667
golevel: 6
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0015667_Site-specific_DNA-methyltransferase_(cytosine-N4-specific)_activity


id: GO:0016614
description: Oxidoreductase activity, acting on CH-OH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016614
golevel: 3
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016614_Oxidoreductase_activity,_acting_on_CH-OH_group_of_donors


id: GO:0016616
description: Oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016616
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016616_Oxidoreductase_activity,_acting_on_the_CH-OH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016620
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016620
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016620_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016627
description: Oxidoreductase activity, acting on the CH-CH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016627
golevel: 3
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016627_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors


id: GO:0016628
description: Oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016628
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016628_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016634
description: Oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016634
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016634_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_oxygen_as_acceptor


id: GO:0016635
memo: https://amigo.geneontology.org/amigo/term/GO:0016635
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016635_Oxidoreductase_activity,_acting_on_the_CH-CH_group_of_donors,_quinone_or_related_compound_as_acceptor

description:
  Oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor


id: GO:0016638
description: Oxidoreductase activity, acting on the CH-NH2 group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016638
golevel: 3
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016638_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors


id: GO:0016639
description: Oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016639
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016639_Oxidoreductase_activity,_acting_on_the_CH-NH2_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016645
description: Oxidoreductase activity, acting on the CH-NH group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016645
golevel: 3
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016645_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors


id: GO:0016646
description: Oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016646
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016646_Oxidoreductase_activity,_acting_on_the_CH-NH_group_of_donors,_NAD_or_NADP_as_acceptor


id: GO:0016655
description: Oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016655
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016655_Oxidoreductase_activity,_acting_on_NAD(P)H,_quinone_or_similar_compound_as_acceptor


id: GO:0016657
description: Oxidoreductase activity, acting on NAD(P)H, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016657
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016657_Oxidoreductase_activity,_acting_on_NAD(P)H,_nitrogenous_group_as_acceptor


id: GO:0016661
description: Oxidoreductase activity, acting on other nitrogenous compounds as donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016661
golevel: 3
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016661_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors


id: GO:0016667
description: Oxidoreductase activity, acting on a sulfur group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016667
golevel: 3
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016667_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: GO:0016671
description: Oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016671
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016671_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_disulfide_as_acceptor


id: GO:0016684
description: Oxidoreductase activity, acting on peroxide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016684
golevel: 3
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016684_Oxidoreductase_activity,_acting_on_peroxide_as_acceptor


id: GO:0016699
description: Oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016699
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016699_Oxidoreductase_activity,_acting_on_hydrogen_as_donor,_iron-sulfur_protein_as_acceptor


id: GO:0016701
description: Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen
memo: https://amigo.geneontology.org/amigo/term/GO:0016701
golevel: 3
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016701_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen


id: GO:0016703
memo: https://amigo.geneontology.org/amigo/term/GO:0016703
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016703_Oxidoreductase_activity,_acting_on_single_donors_with_incorporation_of_molecular_oxygen,_incorporation_of_one_atom_of_oxygen_(internal_monooxygenases_or_internal_mixed_function_oxidases)

description:
  Oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)


id: GO:0016726
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016726
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016726_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor


id: GO:0016728
description: Oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016728
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016728_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_disulfide_as_acceptor


id: GO:0016742
description: Hydroxymethyl-, formyl- and related transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0016742
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016742_Hydroxymethyl-,_formyl-_and_related_transferase_activity


id: GO:0016747
description: Acyltransferase activity, transferring groups other than amino-acyl groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016747
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016747_Acyltransferase_activity,_transferring_groups_other_than_amino-acyl_groups


id: GO:0016765
description: Transferase activity, transferring alkyl or aryl (other than methyl) groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016765
golevel: 3
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016765_Transferase_activity,_transferring_alkyl_or_aryl_(other_than_methyl)_groups


id: GO:0016772
description: Transferase activity, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016772
golevel: 3
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016772_Transferase_activity,_transferring_phosphorus-containing_groups


id: GO:0016773
description: Phosphotransferase activity, alcohol group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016773
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016773_Phosphotransferase_activity,_alcohol_group_as_acceptor


id: GO:0016774
description: Phosphotransferase activity, carboxyl group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016774
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016774_Phosphotransferase_activity,_carboxyl_group_as_acceptor


id: GO:0016775
description: Phosphotransferase activity, nitrogenous group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016775
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016775_Phosphotransferase_activity,_nitrogenous_group_as_acceptor


id: GO:0016776
description: Phosphotransferase activity, phosphate group as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0016776
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016776_Phosphotransferase_activity,_phosphate_group_as_acceptor


id: GO:0016780
description: Phosphotransferase activity, for other substituted phosphate groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016780
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016780_Phosphotransferase_activity,_for_other_substituted_phosphate_groups


id: GO:0016782
description: Transferase activity, transferring sulphur-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0016782
golevel: 3
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016782_Transferase_activity,_transferring_sulphur-containing_groups


id: GO:0016796
memo: https://amigo.geneontology.org/amigo/term/GO:0016796
golevel: 6
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016796_Exonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016810
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016810
golevel: 3
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016810_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds


id: GO:0016811
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016811
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016811_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amides


id: GO:0016812
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
memo: https://amigo.geneontology.org/amigo/term/GO:0016812
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016812_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amides


id: GO:0016813
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016813
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016813_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_linear_amidines


id: GO:0016814
description: Hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
memo: https://amigo.geneontology.org/amigo/term/GO:0016814
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016814_Hydrolase_activity,_acting_on_carbon-nitrogen_(but_not_peptide)_bonds,_in_cyclic_amidines


id: GO:0016818
description: Hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
memo: https://amigo.geneontology.org/amigo/term/GO:0016818
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016818_Hydrolase_activity,_acting_on_acid_anhydrides,_in_phosphorus-containing_anhydrides


id: GO:0016855
description: Racemase and epimerase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016855
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016855_Racemase_and_epimerase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0016857
description: Racemase and epimerase activity, acting on carbohydrates and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0016857
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016857_Racemase_and_epimerase_activity,_acting_on_carbohydrates_and_derivatives


id: GO:0016861
description: Intramolecular oxidoreductase activity, interconverting aldoses and ketoses
memo: https://amigo.geneontology.org/amigo/term/GO:0016861
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016861_Intramolecular_oxidoreductase_activity,_interconverting_aldoses_and_ketoses


id: GO:0016863
description: Intramolecular oxidoreductase activity, transposing C=C bonds
memo: https://amigo.geneontology.org/amigo/term/GO:0016863
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016863_Intramolecular_oxidoreductase_activity,_transposing_C=C_bonds


id: GO:0016868
description: Intramolecular transferase activity, phosphotransferases
memo: https://amigo.geneontology.org/amigo/term/GO:0016868
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016868_Intramolecular_transferase_activity,_phosphotransferases


id: GO:0016884
description: Carbon-nitrogen ligase activity, with glutamine as amido-N-donor
memo: https://amigo.geneontology.org/amigo/term/GO:0016884
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016884_Carbon-nitrogen_ligase_activity,_with_glutamine_as_amido-N-donor


id: GO:0016891
description: Endoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016891
golevel: 7
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016891_Endoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016893
memo: https://amigo.geneontology.org/amigo/term/GO:0016893
golevel: 6
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016893_Endonuclease_activity,_active_with_either_ribo-_or_deoxyribonucleic_acids_and_producing_5-phosphomonoesters

description:
  Endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5-phosphomonoesters


id: GO:0016895
description: Exodeoxyribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016895
golevel: 7
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016895_Exodeoxyribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016896
description: Exoribonuclease activity, producing 5-phosphomonoesters
memo: https://amigo.geneontology.org/amigo/term/GO:0016896
golevel: 7
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016896_Exoribonuclease_activity,_producing_5-phosphomonoesters


id: GO:0016903
description: Oxidoreductase activity, acting on the aldehyde or oxo group of donors
memo: https://amigo.geneontology.org/amigo/term/GO:0016903
golevel: 3
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0016903_Oxidoreductase_activity,_acting_on_the_aldehyde_or_oxo_group_of_donors


id: GO:0018339
description: peptidyl-L-beta-methylthioaspartic acid biosynthetic process from peptidyl-aspartic acid
memo: https://amigo.geneontology.org/amigo/term/GO:0018339
golevel: 8
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0018339_peptidyl-L-beta-methylthioaspartic_acid_biosynthetic_process_from_peptidyl-aspartic_acid


id: GO:0019171
description: 3-hydroxyacyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019171
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0019171_3-hydroxyacyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0019219
description: Regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0019219
golevel: 5
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0019219_Regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0019279
description: L-methionine biosynthetic process from L-homoserine via cystathionine
memo: https://amigo.geneontology.org/amigo/term/GO:0019279
golevel: 13
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0019279_L-methionine_biosynthetic_process_from_L-homoserine_via_cystathionine


id: GO:0019281
description: L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
memo: https://amigo.geneontology.org/amigo/term/GO:0019281
golevel: 14
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0019281_L-methionine_biosynthetic_process_from_homoserine_via_O-succinyl-L-homoserine_and_cystathionine


id: GO:0019288
description: Isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0019288
golevel: 8
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0019288_Isopentenyl_diphosphate_biosynthetic_process,_methylerythritol_4-phosphate_pathway


id: GO:0019829
description: ATPase-coupled cation transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0019829
golevel: 6
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0019829_ATPase-coupled_cation_transmembrane_transporter_activity


id: GO:0022877
description: protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0022877
golevel: 8
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0022877_protein-N(PI)-phosphohistidine-fructose_phosphotransferase_system_transporter_activity


id: GO:0030435
description: Sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0030435
golevel: 3
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0030435_Sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0030604
description: 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0030604
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0030604_1-deoxy-D-xylulose-5-phosphate_reductoisomerase_activity


id: GO:0031250
description: Anaerobic ribonucleoside-triphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031250
golevel: 4
name:
  GOCC.STRING_v12.0_1262761_STRINGid_GO:0031250_Anaerobic_ribonucleoside-triphosphate_reductase_complex


id: GO:0031554
description: Regulation of DNA-templated transcription, termination
memo: https://amigo.geneontology.org/amigo/term/GO:0031554
golevel: 11
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0031554_Regulation_of_DNA-templated_transcription,_termination


id: GO:0032105
description: Negative regulation of response to extracellular stimulus
memo: https://amigo.geneontology.org/amigo/term/GO:0032105
golevel: 6
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0032105_Negative_regulation_of_response_to_extracellular_stimulus


id: GO:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
golevel: 3
name:
  GOCC.STRING_v12.0_1262761_STRINGid_GO:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GO:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
golevel: 3
name:
  GOCC.STRING_v12.0_1262761_STRINGid_GO:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GO:0033283
description: ATPase-coupled organic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033283
golevel: 6
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0033283_ATPase-coupled_organic_acid_transmembrane_transporter_activity


id: GO:0033284
description: ATPase-coupled carboxylic acid transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033284
golevel: 7
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0033284_ATPase-coupled_carboxylic_acid_transmembrane_transporter_activity


id: GO:0033362
description: Lysine biosynthetic process via diaminopimelate, diaminopimelate-aminotransferase pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0033362
golevel: 12
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0033362_Lysine_biosynthetic_process_via_diaminopimelate,_diaminopimelate-aminotransferase_pathway


id: GO:0033668
description: Negative regulation by symbiont of host apoptotic process
memo: https://amigo.geneontology.org/amigo/term/GO:0033668
golevel: 8
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0033668_Negative_regulation_by_symbiont_of_host_apoptotic_process


id: GO:0033744
description: L-methionine:thioredoxin-disulfide S-oxidoreductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0033744
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0033744_L-methionine:thioredoxin-disulfide_S-oxidoreductase_activity


id: GO:0034023
description: 5-(carboxyamino)imidazole ribonucleotide mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0034023
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0034023_5-(carboxyamino)imidazole_ribonucleotide_mutase_activity


id: GO:0034036
description: Purine ribonucleoside bisphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034036
golevel: 10
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0034036_Purine_ribonucleoside_bisphosphate_biosynthetic_process


id: GO:0034249
description: Negative regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034249
golevel: 6
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0034249_Negative_regulation_of_cellular_amide_metabolic_process


id: GO:0034250
description: Positive regulation of cellular amide metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034250
golevel: 6
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0034250_Positive_regulation_of_cellular_amide_metabolic_process


id: GO:0034404
description: Nucleobase-containing small molecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034404
golevel: 6
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0034404_Nucleobase-containing_small_molecule_biosynthetic_process


id: GO:0034656
description: Nucleobase-containing small molecule catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0034656
golevel: 6
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0034656_Nucleobase-containing_small_molecule_catabolic_process


id: GO:0035592
description: Establishment of protein localization to extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0035592
golevel: 6
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0035592_Establishment_of_protein_localization_to_extracellular_region


id: GO:0035598
description: N6-threonylcarbomyladenosine methylthiotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0035598
golevel: 6
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0035598_N6-threonylcarbomyladenosine_methylthiotransferase_activity


id: GO:0035998
description: 7,8-dihydroneopterin 3-triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0035998
golevel: 6
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0035998_7,8-dihydroneopterin_3-triphosphate_biosynthetic_process


id: GO:0036361
description: Racemase activity, acting on amino acids and derivatives
memo: https://amigo.geneontology.org/amigo/term/GO:0036361
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0036361_Racemase_activity,_acting_on_amino_acids_and_derivatives


id: GO:0042083
description: 5,10-methylenetetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042083
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0042083_5,10-methylenetetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042084
description: 5-methyltetrahydrofolate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042084
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0042084_5-methyltetrahydrofolate-dependent_methyltransferase_activity


id: GO:0042085
description: 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0042085
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0042085_5-methyltetrahydropteroyltri-L-glutamate-dependent_methyltransferase_activity


id: GO:0042173
description: Regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042173
golevel: 6
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0042173_Regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0042174
description: Negative regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042174
golevel: 7
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0042174_Negative_regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0042777
description: Proton motive force-driven plasma membrane ATP synthesis
memo: https://amigo.geneontology.org/amigo/term/GO:0042777
golevel: 13
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0042777_Proton_motive_force-driven_plasma_membrane_ATP_synthesis


id: GO:0043225
description: ATPase-coupled inorganic anion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043225
golevel: 6
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0043225_ATPase-coupled_inorganic_anion_transmembrane_transporter_activity


id: GO:0043242
description: Negative regulation of protein-containing complex disassembly
memo: https://amigo.geneontology.org/amigo/term/GO:0043242
golevel: 7
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0043242_Negative_regulation_of_protein-containing_complex_disassembly


id: GO:0043365
description: [formate-C-acetyltransferase]-activating enzyme activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043365
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0043365_[formate-C-acetyltransferase]-activating_enzyme_activity


id: GO:0043772
description: Acyl-phosphate glycerol-3-phosphate acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043772
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0043772_Acyl-phosphate_glycerol-3-phosphate_acyltransferase_activity


id: GO:0043811
description: Phosphate:acyl-[acyl carrier protein] acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0043811
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0043811_Phosphate:acyl-[acyl_carrier_protein]_acyltransferase_activity


id: GO:0044419
description: Biological process involved in interspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0044419
golevel: 1
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0044419_Biological_process_involved_in_interspecies_interaction_between_organisms


id: GO:0044769
description: ATPase activity, coupled to transmembrane movement of ions, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0044769
golevel: 7
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0044769_ATPase_activity,_coupled_to_transmembrane_movement_of_ions,_rotational_mechanism


id: GO:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
golevel: 6
name:
  GOCC.STRING_v12.0_1262761_STRINGid_GO:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GO:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
golevel: 6
name:
  GOCC.STRING_v12.0_1262761_STRINGid_GO:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GO:0045304
description: Regulation of establishment of competence for transformation
memo: https://amigo.geneontology.org/amigo/term/GO:0045304
golevel: 6
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0045304_Regulation_of_establishment_of_competence_for_transformation


id: GO:0045881
description: Positive regulation of sporulation resulting in formation of a cellular spore
memo: https://amigo.geneontology.org/amigo/term/GO:0045881
golevel: 7
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0045881_Positive_regulation_of_sporulation_resulting_in_formation_of_a_cellular_spore


id: GO:0045934
description: Negative regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045934
golevel: 6
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0045934_Negative_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0045935
description: Positive regulation of nucleobase-containing compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0045935
golevel: 6
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0045935_Positive_regulation_of_nucleobase-containing_compound_metabolic_process


id: GO:0046429
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046429
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0046429_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_synthase_activity


id: GO:0046537
description: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046537
golevel: 6
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0046537_2,3-bisphosphoglycerate-independent_phosphoglycerate_mutase_activity


id: GO:0046857
memo: https://amigo.geneontology.org/amigo/term/GO:0046857
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0046857_Oxidoreductase_activity,_acting_on_other_nitrogenous_compounds_as_donors,_with_NAD_or_NADP_as_acceptor

description:
  Oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor


id: GO:0046912
description: Acyltransferase activity, acyl groups converted into alkyl on transfer
memo: https://amigo.geneontology.org/amigo/term/GO:0046912
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0046912_Acyltransferase_activity,_acyl_groups_converted_into_alkyl_on_transfer


id: GO:0046915
description: Transition metal ion transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0046915
golevel: 6
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0046915_Transition_metal_ion_transmembrane_transporter_activity


id: GO:0046933
description: Proton-transporting ATP synthase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046933
golevel: 8
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0046933_Proton-transporting_ATP_synthase_activity,_rotational_mechanism


id: GO:0046961
description: Proton-transporting ATPase activity, rotational mechanism
memo: https://amigo.geneontology.org/amigo/term/GO:0046961
golevel: 8
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0046961_Proton-transporting_ATPase_activity,_rotational_mechanism


id: GO:0047334
description: diphosphate-fructose-6-phosphate 1-phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047334
golevel: 7
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0047334_diphosphate-fructose-6-phosphate_1-phosphotransferase_activity


id: GO:0047451
description: 3-hydroxyoctanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047451
golevel: 6
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0047451_3-hydroxyoctanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0047480
description: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0047480
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0047480_UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine_ligase_activity


id: GO:0048646
description: Anatomical structure formation involved in morphogenesis
memo: https://amigo.geneontology.org/amigo/term/GO:0048646
golevel: 2
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0048646_Anatomical_structure_formation_involved_in_morphogenesis


id: GO:0050511
description: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050511
golevel: 6
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0050511_Undecaprenyldiphospho-muramoylpentapeptide_beta-N-acetylglucosaminyltransferase_activity


id: GO:0050515
description: 4-(cytidine 5-diphospho)-2-C-methyl-D-erythritol kinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050515
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0050515_4-(cytidine_5-diphospho)-2-C-methyl-D-erythritol_kinase_activity


id: GO:0050518
description: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050518
golevel: 6
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0050518_2-C-methyl-D-erythritol_4-phosphate_cytidylyltransferase_activity


id: GO:0050566
description: asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050566
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0050566_asparaginyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0050567
description: glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0050567
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0050567_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity


id: GO:0051075
description: S-adenosylmethionine:tRNA ribosyltransferase-isomerase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051075
golevel: 3
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0051075_S-adenosylmethionine:tRNA_ribosyltransferase-isomerase_activity


id: GO:0051129
description: Negative regulation of cellular component organization
memo: https://amigo.geneontology.org/amigo/term/GO:0051129
golevel: 5
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0051129_Negative_regulation_of_cellular_component_organization


id: GO:0051172
description: Negative regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051172
golevel: 5
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0051172_Negative_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051173
description: Positive regulation of nitrogen compound metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0051173
golevel: 5
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0051173_Positive_regulation_of_nitrogen_compound_metabolic_process


id: GO:0051240
description: Positive regulation of multicellular organismal process
memo: https://amigo.geneontology.org/amigo/term/GO:0051240
golevel: 4
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0051240_Positive_regulation_of_multicellular_organismal_process


id: GO:0051703
description: Biological process involved in intraspecies interaction between organisms
memo: https://amigo.geneontology.org/amigo/term/GO:0051703
golevel: 1
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0051703_Biological_process_involved_in_intraspecies_interaction_between_organisms


id: GO:0051745
description: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0051745
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0051745_4-hydroxy-3-methylbut-2-en-1-yl_diphosphate_reductase_activity


id: GO:0051991
memo: https://amigo.geneontology.org/amigo/term/GO:0051991
golevel: 6
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0051991_UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol_4-beta-N-acetylglucosaminlytransferase_activity

description:
  UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity


id: GO:0051992
memo: https://amigo.geneontology.org/amigo/term/GO:0051992
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0051992_UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate_transferase_activity

description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine:undecaprenyl-phosphate transferase activity


id: GO:0052041
description: Negative regulation by symbiont of host programmed cell death
memo: https://amigo.geneontology.org/amigo/term/GO:0052041
golevel: 7
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0052041_Negative_regulation_by_symbiont_of_host_programmed_cell_death


id: GO:0052592
description: Oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0052592
golevel: 4
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0052592_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_with_an_iron-sulfur_protein_as_acceptor


id: GO:0052908
description: 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0052908
golevel: 9
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0052908_16S_rRNA_(adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase_activity


id: GO:0055052
description: ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing
memo: https://amigo.geneontology.org/amigo/term/GO:0055052
golevel: 7
name:
  GOCC.STRING_v12.0_1262761_STRINGid_GO:0055052_ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing


id: GO:0055086
description: Nucleobase-containing small molecule metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0055086
golevel: 3
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0055086_Nucleobase-containing_small_molecule_metabolic_process


id: GO:0060567
description: Negative regulation of DNA-templated transcription, termination
memo: https://amigo.geneontology.org/amigo/term/GO:0060567
golevel: 12
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0060567_Negative_regulation_of_DNA-templated_transcription,_termination


id: GO:0061504
description: Cyclic threonylcarbamoyladenosine biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0061504
golevel: 11
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0061504_Cyclic_threonylcarbamoyladenosine_biosynthetic_process


id: GO:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
golevel: 4
name:
  GOCC.STRING_v12.0_1262761_STRINGid_GO:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GO:0070626
memo: https://amigo.geneontology.org/amigo/term/GO:0070626
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0070626_(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)_succinate_lyase_(fumarate-forming)_activity

description:
  (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity


id: GO:0071951
description: Conversion of methionyl-tRNA to N-formyl-methionyl-tRNA
memo: https://amigo.geneontology.org/amigo/term/GO:0071951
golevel: 12
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0071951_Conversion_of_methionyl-tRNA_to_N-formyl-methionyl-tRNA


id: GO:0072531
description: Pyrimidine-containing compound transmembrane transport
memo: https://amigo.geneontology.org/amigo/term/GO:0072531
golevel: 5
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0072531_Pyrimidine-containing_compound_transmembrane_transport


id: GO:0072599
description: Establishment of protein localization to endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0072599
golevel: 7
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0072599_Establishment_of_protein_localization_to_endoplasmic_reticulum


id: GO:0097588
description: Archaeal or bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:0097588
golevel: 4
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0097588_Archaeal_or_bacterial-type_flagellum-dependent_cell_motility


id: GO:0102752
memo: https://amigo.geneontology.org/amigo/term/GO:0102752
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0102752_1,4-alpha-glucan_branching_enzyme_activity_(using_a_glucosylated_glycogenin_as_primer_for_glycogen_synthesis)

description:
  1,4-alpha-glucan branching enzyme activity (using a glucosylated glycogenin as primer for glycogen synthesis)


id: GO:0106074
description: aminoacyl-tRNA metabolism involved in translational fidelity
memo: https://amigo.geneontology.org/amigo/term/GO:0106074
golevel: 9
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:0106074_aminoacyl-tRNA_metabolism_involved_in_translational_fidelity


id: GO:0140078
description: Class I DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0140078
golevel: 5
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:0140078_Class_I_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:1901505
description: Carbohydrate derivative transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:1901505
golevel: 3
name:
  GOMF.STRING_v12.0_1262761_STRINGid_GO:1901505_Carbohydrate_derivative_transmembrane_transporter_activity


id: GO:1902021
description: Regulation of bacterial-type flagellum-dependent cell motility
memo: https://amigo.geneontology.org/amigo/term/GO:1902021
golevel: 6
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:1902021_Regulation_of_bacterial-type_flagellum-dependent_cell_motility


id: GO:1903507
description: Negative regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903507
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:1903507_Negative_regulation_of_nucleic_acid-templated_transcription


id: GO:1903508
description: Positive regulation of nucleic acid-templated transcription
memo: https://amigo.geneontology.org/amigo/term/GO:1903508
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:1903508_Positive_regulation_of_nucleic_acid-templated_transcription


id: GO:2000112
description: Regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000112
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:2000112_Regulation_of_cellular_macromolecule_biosynthetic_process


id: GO:2000113
description: Negative regulation of cellular macromolecule biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2000113
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:2000113_Negative_regulation_of_cellular_macromolecule_biosynthetic_process


id: GO:2001060
description: D-glycero-D-manno-heptose 7-phosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:2001060
golevel: 5
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:2001060_D-glycero-D-manno-heptose_7-phosphate_metabolic_process


id: GO:2001061
description: D-glycero-D-manno-heptose 7-phosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:2001061
golevel: 6
name:
  GOBP.STRING_v12.0_1262761_STRINGid_GO:2001061_D-glycero-D-manno-heptose_7-phosphate_biosynthetic_process


id: GOCC:0000159
description: Protein phosphatase type 2A complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000159
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0000159_Protein_phosphatase_type_2A_complex


id: GOCC:0000325
description: Plant-type vacuole
memo: https://amigo.geneontology.org/amigo/term/GO:0000325
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0000325_Plant-type_vacuole


id: GOCC:0000408
description: EKC/KEOPS complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000408
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0000408_EKC/KEOPS_complex


id: GOCC:0000428
description: DNA-directed RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000428
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0000428_DNA-directed_RNA_polymerase_complex


id: GOCC:0000502
description: Proteasome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000502
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0000502_Proteasome_complex


id: GOCC:0000781
description: Chromosome, telomeric region
memo: https://amigo.geneontology.org/amigo/term/GO:0000781
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0000781_Chromosome,_telomeric_region


id: GOCC:0000930
description: Gamma-tubulin complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000930
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0000930_Gamma-tubulin_complex


id: GOCC:0000931
description: Gamma-tubulin large complex
memo: https://amigo.geneontology.org/amigo/term/GO:0000931
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0000931_Gamma-tubulin_large_complex


id: GOCC:0002189
description: Ribose phosphate diphosphokinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0002189
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0002189_Ribose_phosphate_diphosphokinase_complex


id: GOCC:0005576
description: Extracellular region
memo: https://amigo.geneontology.org/amigo/term/GO:0005576
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0005576_Extracellular_region


id: GOCC:0005615
description: Extracellular space
memo: https://amigo.geneontology.org/amigo/term/GO:0005615
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0005615_Extracellular_space


id: GOCC:0005727
description: Extrachromosomal circular DNA
memo: https://amigo.geneontology.org/amigo/term/GO:0005727
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0005727_Extrachromosomal_circular_DNA


id: GOCC:0005759
description: Mitochondrial matrix
memo: https://amigo.geneontology.org/amigo/term/GO:0005759
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0005759_Mitochondrial_matrix


id: GOCC:0005783
description: Endoplasmic reticulum
memo: https://amigo.geneontology.org/amigo/term/GO:0005783
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0005783_Endoplasmic_reticulum


id: GOCC:0005788
description: Endoplasmic reticulum lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0005788
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0005788_Endoplasmic_reticulum_lumen


id: GOCC:0005789
description: Endoplasmic reticulum membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005789
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0005789_Endoplasmic_reticulum_membrane


id: GOCC:0005793
description: Endoplasmic reticulum-Golgi intermediate compartment
memo: https://amigo.geneontology.org/amigo/term/GO:0005793
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0005793_Endoplasmic_reticulum-Golgi_intermediate_compartment


id: GOCC:0005798
description: Golgi-associated vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0005798
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0005798_Golgi-associated_vesicle


id: GOCC:0005815
description: Microtubule organizing center
memo: https://amigo.geneontology.org/amigo/term/GO:0005815
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0005815_Microtubule_organizing_center


id: GOCC:0005835
description: Fatty acid synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005835
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0005835_Fatty_acid_synthase_complex


id: GOCC:0005847
description: mRNA cleavage and polyadenylation specificity factor complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005847
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0005847_mRNA_cleavage_and_polyadenylation_specificity_factor_complex


id: GOCC:0005849
description: mRNA cleavage factor complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005849
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0005849_mRNA_cleavage_factor_complex


id: GOCC:0005882
description: Intermediate filament
memo: https://amigo.geneontology.org/amigo/term/GO:0005882
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0005882_Intermediate_filament


id: GOCC:0005887
description: Integral component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0005887
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0005887_Integral_component_of_plasma_membrane


id: GOCC:0005911
description: Cell-cell junction
memo: https://amigo.geneontology.org/amigo/term/GO:0005911
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0005911_Cell-cell_junction


id: GOCC:0005945
description: 6-phosphofructokinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005945
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0005945_6-phosphofructokinase_complex


id: GOCC:0005948
description: Acetolactate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005948
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0005948_Acetolactate_synthase_complex


id: GOCC:0005951
description: Carbamoyl-phosphate synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005951
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0005951_Carbamoyl-phosphate_synthase_complex


id: GOCC:0005963
description: Magnesium-dependent protein serine/threonine phosphatase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0005963
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0005963_Magnesium-dependent_protein_serine/threonine_phosphatase_complex


id: GOCC:0008076
description: Voltage-gated potassium channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0008076
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0008076_Voltage-gated_potassium_channel_complex


id: GOCC:0008287
description: Protein serine/threonine phosphatase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0008287
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0008287_Protein_serine/threonine_phosphatase_complex


id: GOCC:0009279
description: Cell outer membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009279
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0009279_Cell_outer_membrane


id: GOCC:0009288
description: Bacterial-type flagellum
memo: https://amigo.geneontology.org/amigo/term/GO:0009288
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0009288_Bacterial-type_flagellum


id: GOCC:0009316
description: 3-isopropylmalate dehydratase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009316
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0009316_3-isopropylmalate_dehydratase_complex


id: GOCC:0009317
description: acetyl-CoA carboxylase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009317
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0009317_acetyl-CoA_carboxylase_complex


id: GOCC:0009318
description: Exodeoxyribonuclease VII complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009318
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0009318_Exodeoxyribonuclease_VII_complex


id: GOCC:0009326
description: Formate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009326
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0009326_Formate_dehydrogenase_complex


id: GOCC:0009331
description: glycerol-3-phosphate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009331
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0009331_glycerol-3-phosphate_dehydrogenase_complex


id: GOCC:0009338
description: Exodeoxyribonuclease V complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009338
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0009338_Exodeoxyribonuclease_V_complex


id: GOCC:0009341
description: Beta-galactosidase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009341
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0009341_Beta-galactosidase_complex


id: GOCC:0009347
description: Aspartate carbamoyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009347
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0009347_Aspartate_carbamoyltransferase_complex


id: GOCC:0009358
description: Polyphosphate kinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009358
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0009358_Polyphosphate_kinase_complex


id: GOCC:0009360
description: DNA polymerase III complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009360
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0009360_DNA_polymerase_III_complex


id: GOCC:0009366
description: Enterobactin synthetase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009366
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0009366_Enterobactin_synthetase_complex


id: GOCC:0009368
description: Endopeptidase Clp complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009368
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0009368_Endopeptidase_Clp_complex


id: GOCC:0009376
description: HslUV protease complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009376
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0009376_HslUV_protease_complex


id: GOCC:0009379
description: Holliday junction helicase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009379
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0009379_Holliday_junction_helicase_complex


id: GOCC:0009380
description: Excinuclease repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009380
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0009380_Excinuclease_repair_complex


id: GOCC:0009420
description: Bacterial-type flagellum filament
memo: https://amigo.geneontology.org/amigo/term/GO:0009420
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0009420_Bacterial-type_flagellum_filament


id: GOCC:0009421
description: Bacterial-type flagellum filament cap
memo: https://amigo.geneontology.org/amigo/term/GO:0009421
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0009421_Bacterial-type_flagellum_filament_cap


id: GOCC:0009424
description: Bacterial-type flagellum hook
memo: https://amigo.geneontology.org/amigo/term/GO:0009424
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0009424_Bacterial-type_flagellum_hook


id: GOCC:0009425
description: Bacterial-type flagellum basal body
memo: https://amigo.geneontology.org/amigo/term/GO:0009425
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0009425_Bacterial-type_flagellum_basal_body


id: GOCC:0009431
description: Bacterial-type flagellum basal body, MS ring
memo: https://amigo.geneontology.org/amigo/term/GO:0009431
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0009431_Bacterial-type_flagellum_basal_body,_MS_ring


id: GOCC:0009505
description: Plant-type cell wall
memo: https://amigo.geneontology.org/amigo/term/GO:0009505
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0009505_Plant-type_cell_wall


id: GOCC:0009570
description: Chloroplast stroma
memo: https://amigo.geneontology.org/amigo/term/GO:0009570
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0009570_Chloroplast_stroma


id: GOCC:0009654
description: Photosystem II oxygen evolving complex
memo: https://amigo.geneontology.org/amigo/term/GO:0009654
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0009654_Photosystem_II_oxygen_evolving_complex


id: GOCC:0009897
description: External side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009897
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0009897_External_side_of_plasma_membrane


id: GOCC:0009898
description: Cytoplasmic side of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0009898
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0009898_Cytoplasmic_side_of_plasma_membrane


id: GOCC:0009941
description: Chloroplast envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0009941
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0009941_Chloroplast_envelope


id: GOCC:0010170
description: glucose-1-phosphate adenylyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0010170
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0010170_glucose-1-phosphate_adenylyltransferase_complex


id: GOCC:0012505
description: Endomembrane system
memo: https://amigo.geneontology.org/amigo/term/GO:0012505
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0012505_Endomembrane_system


id: GOCC:0012507
description: ER to Golgi transport vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0012507
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0012507_ER_to_Golgi_transport_vesicle_membrane


id: GOCC:0015627
description: Type II protein secretion system complex
memo: https://amigo.geneontology.org/amigo/term/GO:0015627
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0015627_Type_II_protein_secretion_system_complex


id: GOCC:0015630
description: Microtubule cytoskeleton
memo: https://amigo.geneontology.org/amigo/term/GO:0015630
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0015630_Microtubule_cytoskeleton


id: GOCC:0015934
description: Large ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0015934
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0015934_Large_ribosomal_subunit


id: GOCC:0015935
description: Small ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0015935
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0015935_Small_ribosomal_subunit


id: GOCC:0016021
description: Integral component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0016021
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0016021_Integral_component_of_membrane


id: GOCC:0016465
description: Chaperonin ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016465
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0016465_Chaperonin_ATPase_complex


id: GOCC:0016469
description: Proton-transporting two-sector ATPase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0016469
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0016469_Proton-transporting_two-sector_ATPase_complex


id: GOCC:0018995
description: Host cellular component
memo: https://amigo.geneontology.org/amigo/term/GO:0018995
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0018995_Host_cellular_component


id: GOCC:0019008
description: Molybdopterin synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0019008
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0019008_Molybdopterin_synthase_complex


id: GOCC:0019897
description: Extrinsic component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019897
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0019897_Extrinsic_component_of_plasma_membrane


id: GOCC:0019898
description: Extrinsic component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0019898
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0019898_Extrinsic_component_of_membrane


id: GOCC:0022625
description: Cytosolic large ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0022625
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0022625_Cytosolic_large_ribosomal_subunit


id: GOCC:0022626
description: Cytosolic ribosome
memo: https://amigo.geneontology.org/amigo/term/GO:0022626
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0022626_Cytosolic_ribosome


id: GOCC:0022627
description: Cytosolic small ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0022627
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0022627_Cytosolic_small_ribosomal_subunit


id: GOCC:0030075
description: Bacterial thylakoid
memo: https://amigo.geneontology.org/amigo/term/GO:0030075
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0030075_Bacterial_thylakoid


id: GOCC:0030076
description: Light-harvesting complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030076
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0030076_Light-harvesting_complex


id: GOCC:0030077
description: Plasma membrane light-harvesting complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030077
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0030077_Plasma_membrane_light-harvesting_complex


id: GOCC:0030127
description: COPII vesicle coat
memo: https://amigo.geneontology.org/amigo/term/GO:0030127
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0030127_COPII_vesicle_coat


id: GOCC:0030133
description: Transport vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0030133
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0030133_Transport_vesicle


id: GOCC:0030134
description: COPII-coated ER to Golgi transport vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0030134
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0030134_COPII-coated_ER_to_Golgi_transport_vesicle


id: GOCC:0030139
description: Endocytic vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0030139
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0030139_Endocytic_vesicle


id: GOCC:0030257
description: Type III protein secretion system complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030257
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0030257_Type_III_protein_secretion_system_complex


id: GOCC:0030288
description: Outer membrane-bounded periplasmic space
memo: https://amigo.geneontology.org/amigo/term/GO:0030288
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0030288_Outer_membrane-bounded_periplasmic_space


id: GOCC:0030312
description: External encapsulating structure
memo: https://amigo.geneontology.org/amigo/term/GO:0030312
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0030312_External_encapsulating_structure


id: GOCC:0030658
description: Transport vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030658
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0030658_Transport_vesicle_membrane


id: GOCC:0030659
description: Cytoplasmic vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030659
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0030659_Cytoplasmic_vesicle_membrane


id: GOCC:0030660
description: Golgi-associated vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030660
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0030660_Golgi-associated_vesicle_membrane


id: GOCC:0030662
description: Coated vesicle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0030662
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0030662_Coated_vesicle_membrane


id: GOCC:0030677
description: Ribonuclease P complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030677
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0030677_Ribonuclease_P_complex


id: GOCC:0030694
description: Bacterial-type flagellum basal body, rod
memo: https://amigo.geneontology.org/amigo/term/GO:0030694
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0030694_Bacterial-type_flagellum_basal_body,_rod


id: GOCC:0030880
description: RNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030880
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0030880_RNA_polymerase_complex


id: GOCC:0030956
description: glutamyl-tRNA(Gln) amidotransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030956
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0030956_glutamyl-tRNA(Gln)_amidotransferase_complex


id: GOCC:0030964
description: NADH dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0030964
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0030964_NADH_dehydrogenase_complex


id: GOCC:0031012
description: Extracellular matrix
memo: https://amigo.geneontology.org/amigo/term/GO:0031012
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0031012_Extracellular_matrix


id: GOCC:0031090
description: Organelle membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031090
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0031090_Organelle_membrane


id: GOCC:0031224
description: Intrinsic component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031224
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0031224_Intrinsic_component_of_membrane


id: GOCC:0031225
description: Anchored component of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031225
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0031225_Anchored_component_of_membrane


id: GOCC:0031226
description: Intrinsic component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0031226
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0031226_Intrinsic_component_of_plasma_membrane


id: GOCC:0031250
description: Anaerobic ribonucleoside-triphosphate reductase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031250
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0031250_Anaerobic_ribonucleoside-triphosphate_reductase_complex


id: GOCC:0031410
description: Cytoplasmic vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0031410
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0031410_Cytoplasmic_vesicle


id: GOCC:0031469
description: Polyhedral organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0031469
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0031469_Polyhedral_organelle


id: GOCC:0031471
description: Ethanolamine degradation polyhedral organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0031471
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0031471_Ethanolamine_degradation_polyhedral_organelle


id: GOCC:0031515
description: tRNA (m1A) methyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031515
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0031515_tRNA_(m1A)_methyltransferase_complex


id: GOCC:0031588
description: Nucleotide-activated protein kinase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031588
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0031588_Nucleotide-activated_protein_kinase_complex


id: GOCC:0031597
description: Cytosolic proteasome complex
memo: https://amigo.geneontology.org/amigo/term/GO:0031597
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0031597_Cytosolic_proteasome_complex


id: GOCC:0031967
description: Organelle envelope
memo: https://amigo.geneontology.org/amigo/term/GO:0031967
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0031967_Organelle_envelope


id: GOCC:0031974
description: Membrane-enclosed lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0031974
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0031974_Membrane-enclosed_lumen


id: GOCC:0031984
description: Organelle subcompartment
memo: https://amigo.geneontology.org/amigo/term/GO:0031984
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0031984_Organelle_subcompartment


id: GOCC:0032153
description: Cell division site
memo: https://amigo.geneontology.org/amigo/term/GO:0032153
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0032153_Cell_division_site


id: GOCC:0032299
description: Ribonuclease H2 complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032299
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0032299_Ribonuclease_H2_complex


id: GOCC:0032300
description: Mismatch repair complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032300
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0032300_Mismatch_repair_complex


id: GOCC:0032991
description: Protein-containing complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032991
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0032991_Protein-containing_complex


id: GOCC:0032993
description: protein-DNA complex
memo: https://amigo.geneontology.org/amigo/term/GO:0032993
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0032993_protein-DNA_complex


id: GOCC:0033177
description: Proton-transporting two-sector ATPase complex, proton-transporting domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033177
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0033177_Proton-transporting_two-sector_ATPase_complex,_proton-transporting_domain


id: GOCC:0033178
description: Proton-transporting two-sector ATPase complex, catalytic domain
memo: https://amigo.geneontology.org/amigo/term/GO:0033178
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0033178_Proton-transporting_two-sector_ATPase_complex,_catalytic_domain


id: GOCC:0033202
description: DNA helicase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0033202
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0033202_DNA_helicase_complex


id: GOCC:0034357
description: Photosynthetic membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0034357
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0034357_Photosynthetic_membrane


id: GOCC:0034702
description: Ion channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034702
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0034702_Ion_channel_complex


id: GOCC:0034703
description: Cation channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034703
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0034703_Cation_channel_complex


id: GOCC:0034705
description: Potassium channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034705
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0034705_Potassium_channel_complex


id: GOCC:0034707
description: Chloride channel complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034707
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0034707_Chloride_channel_complex


id: GOCC:0034708
description: Methyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0034708
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0034708_Methyltransferase_complex


id: GOCC:0036125
description: Fatty acid beta-oxidation multienzyme complex
memo: https://amigo.geneontology.org/amigo/term/GO:0036125
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0036125_Fatty_acid_beta-oxidation_multienzyme_complex


id: GOCC:0036477
description: Somatodendritic compartment
memo: https://amigo.geneontology.org/amigo/term/GO:0036477
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0036477_Somatodendritic_compartment


id: GOCC:0042175
description: Nuclear outer membrane-endoplasmic reticulum membrane network
memo: https://amigo.geneontology.org/amigo/term/GO:0042175
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0042175_Nuclear_outer_membrane-endoplasmic_reticulum_membrane_network


id: GOCC:0042575
description: DNA polymerase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0042575
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0042575_DNA_polymerase_complex


id: GOCC:0042597
description: Periplasmic space
memo: https://amigo.geneontology.org/amigo/term/GO:0042597
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0042597_Periplasmic_space


id: GOCC:0042601
description: Endospore-forming forespore
memo: https://amigo.geneontology.org/amigo/term/GO:0042601
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0042601_Endospore-forming_forespore


id: GOCC:0042651
description: Thylakoid membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0042651
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0042651_Thylakoid_membrane


id: GOCC:0042716
description: Plasma membrane-derived chromatophore
memo: https://amigo.geneontology.org/amigo/term/GO:0042716
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0042716_Plasma_membrane-derived_chromatophore


id: GOCC:0042717
description: Plasma membrane-derived chromatophore membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0042717
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0042717_Plasma_membrane-derived_chromatophore_membrane


id: GOCC:0042763
description: Intracellular immature spore
memo: https://amigo.geneontology.org/amigo/term/GO:0042763
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0042763_Intracellular_immature_spore


id: GOCC:0043005
description: Neuron projection
memo: https://amigo.geneontology.org/amigo/term/GO:0043005
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0043005_Neuron_projection


id: GOCC:0043190
description: ATP-binding cassette (ABC) transporter complex
memo: https://amigo.geneontology.org/amigo/term/GO:0043190
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0043190_ATP-binding_cassette_(ABC)_transporter_complex


id: GOCC:0043227
description: Membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043227
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0043227_Membrane-bounded_organelle


id: GOCC:0043228
description: Non-membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043228
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0043228_Non-membrane-bounded_organelle


id: GOCC:0043229
description: Intracellular organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043229
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0043229_Intracellular_organelle


id: GOCC:0043230
description: Extracellular organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043230
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0043230_Extracellular_organelle


id: GOCC:0043231
description: Intracellular membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043231
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0043231_Intracellular_membrane-bounded_organelle


id: GOCC:0043232
description: Intracellular non-membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0043232
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0043232_Intracellular_non-membrane-bounded_organelle


id: GOCC:0043527
description: tRNA methyltransferase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0043527
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0043527_tRNA_methyltransferase_complex


id: GOCC:0043590
description: Bacterial nucleoid
memo: https://amigo.geneontology.org/amigo/term/GO:0043590
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0043590_Bacterial_nucleoid


id: GOCC:0043684
description: Type IV secretion system complex
memo: https://amigo.geneontology.org/amigo/term/GO:0043684
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0043684_Type_IV_secretion_system_complex


id: GOCC:0044391
description: Ribosomal subunit
memo: https://amigo.geneontology.org/amigo/term/GO:0044391
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0044391_Ribosomal_subunit


id: GOCC:0044815
description: DNA packaging complex
memo: https://amigo.geneontology.org/amigo/term/GO:0044815
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0044815_DNA_packaging_complex


id: GOCC:0045111
description: Intermediate filament cytoskeleton
memo: https://amigo.geneontology.org/amigo/term/GO:0045111
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0045111_Intermediate_filament_cytoskeleton


id: GOCC:0045254
description: Pyruvate dehydrogenase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0045254
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0045254_Pyruvate_dehydrogenase_complex


id: GOCC:0045259
description: Proton-transporting ATP synthase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0045259
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0045259_Proton-transporting_ATP_synthase_complex


id: GOCC:0045261
description: Proton-transporting ATP synthase complex, catalytic core F(1)
memo: https://amigo.geneontology.org/amigo/term/GO:0045261
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0045261_Proton-transporting_ATP_synthase_complex,_catalytic_core_F(1)


id: GOCC:0045263
description: Proton-transporting ATP synthase complex, coupling factor F(o)
memo: https://amigo.geneontology.org/amigo/term/GO:0045263
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0045263_Proton-transporting_ATP_synthase_complex,_coupling_factor_F(o)


id: GOCC:0045271
description: Respiratory chain complex I
memo: https://amigo.geneontology.org/amigo/term/GO:0045271
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0045271_Respiratory_chain_complex_I


id: GOCC:0045272
description: Plasma membrane respiratory chain complex I
memo: https://amigo.geneontology.org/amigo/term/GO:0045272
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0045272_Plasma_membrane_respiratory_chain_complex_I


id: GOCC:0045335
description: Phagocytic vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0045335
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0045335_Phagocytic_vesicle


id: GOCC:0046658
description: Anchored component of plasma membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0046658
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0046658_Anchored_component_of_plasma_membrane


id: GOCC:0046821
description: Extrachromosomal DNA
memo: https://amigo.geneontology.org/amigo/term/GO:0046821
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0046821_Extrachromosomal_DNA


id: GOCC:0048471
description: Perinuclear region of cytoplasm
memo: https://amigo.geneontology.org/amigo/term/GO:0048471
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0048471_Perinuclear_region_of_cytoplasm


id: GOCC:0048476
description: Holliday junction resolvase complex
memo: https://amigo.geneontology.org/amigo/term/GO:0048476
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0048476_Holliday_junction_resolvase_complex


id: GOCC:0048500
description: Signal recognition particle
memo: https://amigo.geneontology.org/amigo/term/GO:0048500
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0048500_Signal_recognition_particle


id: GOCC:0055040
description: Periplasmic flagellum
memo: https://amigo.geneontology.org/amigo/term/GO:0055040
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0055040_Periplasmic_flagellum


id: GOCC:0055052
description: ATP-binding cassette (ABC) transporter complex, substrate-binding subunit-containing
memo: https://amigo.geneontology.org/amigo/term/GO:0055052
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0055052_ATP-binding_cassette_(ABC)_transporter_complex,_substrate-binding_subunit-containing


id: GOCC:0060205
description: Cytoplasmic vesicle lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0060205
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0060205_Cytoplasmic_vesicle_lumen


id: GOCC:0061695
description: Transferase complex, transferring phosphorus-containing groups
memo: https://amigo.geneontology.org/amigo/term/GO:0061695
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0061695_Transferase_complex,_transferring_phosphorus-containing_groups


id: GOCC:0065010
description: Extracellular membrane-bounded organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0065010
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0065010_Extracellular_membrane-bounded_organelle


id: GOCC:0070013
description: Intracellular organelle lumen
memo: https://amigo.geneontology.org/amigo/term/GO:0070013
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0070013_Intracellular_organelle_lumen


id: GOCC:0070062
description: Extracellular exosome
memo: https://amigo.geneontology.org/amigo/term/GO:0070062
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0070062_Extracellular_exosome


id: GOCC:0070161
description: Anchoring junction
memo: https://amigo.geneontology.org/amigo/term/GO:0070161
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0070161_Anchoring_junction


id: GOCC:0070470
description: Plasma membrane respirasome
memo: https://amigo.geneontology.org/amigo/term/GO:0070470
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0070470_Plasma_membrane_respirasome


id: GOCC:0097708
description: Intracellular vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0097708
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0097708_Intracellular_vesicle


id: GOCC:0098533
description: ATPase dependent transmembrane transport complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098533
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0098533_ATPase_dependent_transmembrane_transport_complex


id: GOCC:0098561
description: Methyl accepting chemotaxis protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098561
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0098561_Methyl_accepting_chemotaxis_protein_complex


id: GOCC:0098562
description: Cytoplasmic side of membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0098562
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0098562_Cytoplasmic_side_of_membrane


id: GOCC:0098588
description: Bounding membrane of organelle
memo: https://amigo.geneontology.org/amigo/term/GO:0098588
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0098588_Bounding_membrane_of_organelle


id: GOCC:0098687
description: Chromosomal region
memo: https://amigo.geneontology.org/amigo/term/GO:0098687
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0098687_Chromosomal_region


id: GOCC:0098796
description: Membrane protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098796
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0098796_Membrane_protein_complex


id: GOCC:0098797
description: Plasma membrane protein complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098797
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0098797_Plasma_membrane_protein_complex


id: GOCC:0098803
description: Respiratory chain complex
memo: https://amigo.geneontology.org/amigo/term/GO:0098803
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0098803_Respiratory_chain_complex


id: GOCC:0098827
description: Endoplasmic reticulum subcompartment
memo: https://amigo.geneontology.org/amigo/term/GO:0098827
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0098827_Endoplasmic_reticulum_subcompartment


id: GOCC:0098857
description: Membrane microdomain
memo: https://amigo.geneontology.org/amigo/term/GO:0098857
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0098857_Membrane_microdomain


id: GOCC:0099023
description: Vesicle tethering complex
memo: https://amigo.geneontology.org/amigo/term/GO:0099023
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0099023_Vesicle_tethering_complex


id: GOCC:0099080
description: Supramolecular complex
memo: https://amigo.geneontology.org/amigo/term/GO:0099080
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0099080_Supramolecular_complex


id: GOCC:0099081
description: Supramolecular polymer
memo: https://amigo.geneontology.org/amigo/term/GO:0099081
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0099081_Supramolecular_polymer


id: GOCC:0099503
description: Secretory vesicle
memo: https://amigo.geneontology.org/amigo/term/GO:0099503
name:
  Subcellular localization (COMPARTMENTS).STRING_v12.0_1262761_STRINGid_GOCC:0099503_Secretory_vesicle


