# geneInfo

ensembl_gene_id: NSJP_0001
symbol: NSJP_0001
gene_biotype: protein_coding
description:
  Putative Mannosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0002
symbol: NSJP_0002
gene_biotype: protein_coding
description:
  Putative Glycosyl transferase group 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0003
symbol: NSJP_0003
gene_biotype: protein_coding
description:
  Putative Lipopolysaccharide core biosynthesis glycosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0004
symbol: NSJP_0004
gene_biotype: protein_coding
description:
  Putative glycosyl transferase (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0007
symbol: NSJP_0007
gene_biotype: protein_coding
description:
  Putative Phosphatidylinositol alpha-mannosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0008
symbol: NSJP_0008
gene_biotype: protein_coding
description:
  Putative Lipopolysaccharide heptosyltransferase II; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0009
symbol: gmhB
gene_biotype: protein_coding
description:
  Lipopolysaccharide heptosyltransferase II and D, D-heptose 1,7-bisphosphate phosphatase (Modular protein).


ensembl_gene_id: NSJP_0010
symbol: lpxK
gene_biotype: protein_coding
description:
  Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: NSJP_0011
symbol: waaA
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: NSJP_0014
symbol: msbA
gene_biotype: protein_coding
description:
  Fused lipid transporter subunits of ABC superfamily: membrane component; Function of homologous gene experimentally demonstrated in an other organism; transporter.


ensembl_gene_id: NSJP_0015
symbol: lpxB
gene_biotype: protein_coding
description:
  Lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: NSJP_0016
symbol: NSJP_0016
gene_biotype: protein_coding
description:
  Putative Oxidoreductase, Gfo/Idh/MocA family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0018
symbol: lpxA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine acetyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: NSJP_0019
symbol: fabZ
gene_biotype: protein_coding
description:
  (3R)-hydroxymyristol acyl carrier protein dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: NSJP_0020
symbol: NSJP_0020
gene_biotype: protein_coding
description:
  Putative Outer membrane chaperone Skp; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0022
symbol: NSJP_0022
gene_biotype: protein_coding
description:
  Putative Outer membrane protein assembly factor YaeT; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0024
symbol: lon
gene_biotype: protein_coding
description:
  Lon protease; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: NSJP_0025
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: NSJP_0048
symbol: thiE
gene_biotype: protein_coding
description:
  Putative thiamine-phosphate synthase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: NSJP_0049
symbol: thiG
gene_biotype: protein_coding
description:
  Thiamin biosynthesis ThiGH complex subunit; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: NSJP_0051
symbol: NSJP_0051
gene_biotype: protein_coding
description:
  Putative DNA polymerase IV, family X (N-terminal); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0053
symbol: NSJP_0053
gene_biotype: protein_coding
description:
  Putative Murein hydrolase EnvC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0055
symbol: ftsE
gene_biotype: protein_coding
description:
  Transporter subunit: ATP-binding component of ABC superfamily; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: NSJP_0058
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: NSJP_0059
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-1-)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: NSJP_0060
symbol: rimM
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: NSJP_0061
symbol: rpsP
gene_biotype: protein_coding
description:
  30S ribosomal subunit protein S16; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bS16 family.


ensembl_gene_id: NSJP_0062
symbol: ffh
gene_biotype: protein_coding
description:
  Signal Recognition Particle (SRP) component with 4.5S RNA (ffs); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: NSJP_0065
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinulease of nucleotide excision repair, DNA damage recognition component; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. I [...]


ensembl_gene_id: NSJP_0067
symbol: rbpA
gene_biotype: protein_coding
description:
  Putative RNA-binding protein RbpA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0072
symbol: NSJP_0072
gene_biotype: protein_coding
description:
  Putative Peptidase, M28 family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0074
symbol: NSJP_0074
gene_biotype: protein_coding
description:
  Putative Outer membrane efflux protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0082
symbol: NSJP_0082
gene_biotype: protein_coding
description:
  Putative N-carbamoyl-D-amino acid hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0084
symbol: NSJP_0084
gene_biotype: protein_coding
description:
  Putative 3-mercaptopyruvate sulfurtransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0089
symbol: NSJP_0089
gene_biotype: protein_coding
description:
  Putative Oligoendopeptidase F; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0094
symbol: relA
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: NSJP_0098
symbol: hppA
gene_biotype: protein_coding
description:
  K(+)-insensitive pyrophosphate-energized proton pump; Proton pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for proton movement across the membrane. Generates a proton motive force.


ensembl_gene_id: NSJP_0106
symbol: NSJP_0106
gene_biotype: protein_coding
description:
  Putative Nitrate oxidoreductase, gamma subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0108
symbol: tatA
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: NSJP_0112
symbol: NSJP_0112
gene_biotype: protein_coding
description:
  Putative Nitrate reductase, gamma subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0119
symbol: atoC
gene_biotype: protein_coding
description:
  Fused response regulator of ato opeon, in two-component system with AtoS: response regulator; Function of homologous gene experimentally demonstrated in an other organism; regulator.


ensembl_gene_id: NSJP_0120
symbol: NSJP_0120
gene_biotype: protein_coding
description:
  Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0121
symbol: secF
gene_biotype: protein_coding
description:
  Protein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: NSJP_0122
symbol: secD
gene_biotype: protein_coding
description:
  Protein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: NSJP_0124
symbol: tgt
gene_biotype: protein_coding
description:
  tRNA-guanine transglycosylase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form the [...]


ensembl_gene_id: NSJP_0127
symbol: NSJP_0127
gene_biotype: protein_coding
description:
  Putative Glycosyl transferase, family 9; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0128
symbol: mobA
gene_biotype: protein_coding
description:
  Putative molybdenum cofactor guanylyltransferase; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.


ensembl_gene_id: NSJP_0129
symbol: NSJP_0129
gene_biotype: protein_coding
description:
  Putative Cytochrome c (Modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0143
symbol: NSJP_0143
gene_biotype: protein_coding
description:
  Putative O-methyltransferase, family 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0156
symbol: NSJP_0156
gene_biotype: protein_coding
description:
  Putative Response Regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0157
symbol: rbpF
gene_biotype: protein_coding
description:
  Putative RNA-binding protein RbpF; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0159
symbol: NSJP_0159
gene_biotype: protein_coding
description:
  Putative ABC-2 type transport system, ATP-binding and permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0162
symbol: NSJP_0162
gene_biotype: protein_coding
description:
  Putative Cytochrome c-type protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0164
symbol: moeA
gene_biotype: protein_coding
description:
  Molybdopterin biosynthesis protein MoeA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: NSJP_0165
symbol: NSJP_0165
gene_biotype: protein_coding
description:
  Conserved protein of unknown function; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: NSJP_0166
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.


ensembl_gene_id: NSJP_0167
symbol: htrA
gene_biotype: protein_coding
description:
  Putative periplasmic serine endoprotease DegP-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0175
symbol: NSJP_0175
gene_biotype: protein_coding
description:
  Putative membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0176
symbol: NSJP_0176
gene_biotype: protein_coding
description:
  Putative Type IV pilus biogenesis/stability protein PilW; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0178
symbol: mtnP
gene_biotype: protein_coding
description:
  S-methyl-5'-thioadenosine phosphorylase; Catalyzes the reversible phosphorylation of S-methyl-5'- thioadenosine (MTA) to adenine and 5-methylthioribose-1-phosphate. Involved in the breakdown of MTA, a major by-product of polyamine biosynthesis. Responsible for the first step in the methionine salvage pathway after MTA has been generated from S-adenosylmethionine. Has broad substrate specificity with 6-aminopurine nucleosides as preferred substrates; Belongs to the PNP/MTAP phosphorylase family. MTAP subfamily.


ensembl_gene_id: NSJP_0179
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: NSJP_0180
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: NSJP_0181
symbol: NSJP_0181
gene_biotype: protein_coding
description:
  Putative Tol-Pal system protein YbgF; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0182
symbol: NSJP_0182
gene_biotype: protein_coding
description:
  Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0188
symbol: xerD
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: NSJP_0189
symbol: NSJP_0189
gene_biotype: protein_coding
description:
  Putative Extracellular ligand-binding receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0190
symbol: NSJP_0190
gene_biotype: protein_coding
description:
  Putative peptidase M50; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0195
symbol: NSJP_0195
gene_biotype: protein_coding
description:
  Putative metal-binding enzyme; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0208
symbol: gltB
gene_biotype: protein_coding
description:
  Glutamate synthase, large subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: NSJP_0212
symbol: NSJP_0212
gene_biotype: protein_coding
description:
  Putative Nucleotidyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0214
symbol: NSJP_0214
gene_biotype: protein_coding
description:
  Putative Phosphotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0218
symbol: NSJP_0218
gene_biotype: protein_coding
description:
  Putative Thiamine biosynthesis protein ThiS; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0222
symbol: NSJP_0222
gene_biotype: protein_coding
description:
  Putative PP-loop ATPase, YdaO type; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the TtcA family.


ensembl_gene_id: NSJP_0223
symbol: dnaJ
gene_biotype: protein_coding
description:
  Chaperone protein DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...]


ensembl_gene_id: NSJP_0229
symbol: NSJP_0229
gene_biotype: protein_coding
description:
  Serine protease Do; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0230
symbol: NSJP_0230
gene_biotype: protein_coding
description:
  Putative Glycosyltransferase, group 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0231
symbol: NSJP_0231
gene_biotype: protein_coding
description:
  Putative Amine oxidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0232
symbol: NSJP_0232
gene_biotype: protein_coding
description:
  Putative Phospho-N-acetylmuramoyl-pentapeptide-transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0233
symbol: NSJP_0233
gene_biotype: protein_coding
description:
  Putative GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0242
symbol: NSJP_0242
gene_biotype: protein_coding
description:
  Putative glycosyltransferase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0244
symbol: NSJP_0244
gene_biotype: protein_coding
description:
  Putative Glycosyl transferase, family 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0256
symbol: NSJP_0256
gene_biotype: protein_coding
description:
  Putative ABC transport system, permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0262
symbol: dnaC
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: NSJP_0263
symbol: hisZ
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase regulatory subunit (modular protein); Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: NSJP_0264
symbol: serA
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: NSJP_0267
symbol: NSJP_0267
gene_biotype: protein_coding
description:
  Putative Lytic murein transglycosylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0269
symbol: bioF
gene_biotype: protein_coding
description:
  8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.


ensembl_gene_id: NSJP_0270
symbol: pilT
gene_biotype: protein_coding
description:
  Twitching motility protein; Function of homologous gene experimentally demonstrated in an other organism; phenotype.


ensembl_gene_id: NSJP_0282
symbol: yhhJ
gene_biotype: protein_coding
description:
  Putative transporter subunit: membrane component of ABC superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.


ensembl_gene_id: NSJP_0283
symbol: rbbA
gene_biotype: protein_coding
description:
  Fused ribosome-associated ATPase: ATP-binding protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: NSJP_0295
symbol: NSJP_0295
gene_biotype: protein_coding
description:
  Putative Transcriptional regulator, AraC family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0312
symbol: NSJP_0312
gene_biotype: protein_coding
description:
  Putative ABC transporter, periplasmic substrate-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0315
symbol: NSJP_0315
gene_biotype: protein_coding
description:
  Putative Mechanosensitive ion channel family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0321
symbol: mdtC
gene_biotype: protein_coding
description:
  Multidrug efflux system, subunit C; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: NSJP_0322
symbol: mdtB
gene_biotype: protein_coding
description:
  Multidrug efflux system, subunit B; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: NSJP_0323
symbol: mdtA
gene_biotype: protein_coding
description:
  Multidrug efflux system, subunit A; Function of homologous gene experimentally demonstrated in an other organism; transporter.


ensembl_gene_id: NSJP_0332
symbol: hiuH
gene_biotype: protein_coding
description:
  5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.


ensembl_gene_id: NSJP_0343
symbol: NSJP_0343
gene_biotype: protein_coding
description:
  Putative Tetratricopeptide TPR_2 repeat protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0344
symbol: NSJP_0344
gene_biotype: protein_coding
description:
  Putative D-alanyl-D-alanine carboxypeptidase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the peptidase S11 family.


ensembl_gene_id: NSJP_0367
symbol: NSJP_0367
gene_biotype: protein_coding
description:
  Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: NSJP_0369
symbol: NSJP_0369
gene_biotype: protein_coding
description:
  AcrB/AcrD/AcrF family protein (fragment); Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: NSJP_0380
symbol: NSJP_0380
gene_biotype: protein_coding
description:
  Putative glucose-fructose oxidoreductase oxidoreductase protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0400
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: NSJP_0401
symbol: NSJP_0401
gene_biotype: protein_coding
description:
  Putative ABC-type transport system, ATPase component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0404
symbol: NSJP_0404
gene_biotype: protein_coding
description:
  Putative 3-oxoadipate enol-lactonase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0411
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.


ensembl_gene_id: NSJP_0414
symbol: NSJP_0414
gene_biotype: protein_coding
description:
  Putative Ferredoxin-thioredoxin reductase, catalytic subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0419
symbol: NSJP_0419
gene_biotype: protein_coding
description:
  Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: NSJP_0422
symbol: NSJP_0422
gene_biotype: protein_coding
description:
  Putative Diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: NSJP_0424
symbol: NSJP_0424
gene_biotype: protein_coding
description:
  Putative Glutaredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0436
symbol: NSJP_0436
gene_biotype: protein_coding
description:
  Putative Response regulator, CheY-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0442
symbol: NSJP_0442
gene_biotype: protein_coding
description:
  Putative Penicillin-binding protein 1B; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0455
symbol: NSJP_0455
gene_biotype: protein_coding
description:
  Putative Na+/H+ antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.


ensembl_gene_id: NSJP_0456
symbol: NSJP_0456
gene_biotype: protein_coding
description:
  Putative bacterioferritin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0459
symbol: yjdF
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Homologs of previously reported genes of unknown function; putative membrane component.


ensembl_gene_id: NSJP_0474
symbol: NSJP_0474
gene_biotype: protein_coding
description:
  Putative Thiosulfate sulfurtransferase GlpE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0475
symbol: NSJP_0475
gene_biotype: protein_coding
description:
  Putative UDP-glucose 4-epimerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0476
symbol: yqxC
gene_biotype: protein_coding
description:
  Putative rRNA methyltransferase YqxC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0478
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease 7 small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: NSJP_0479
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease 7 large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: NSJP_0483
symbol: NSJP_0483
gene_biotype: protein_coding
description:
  Putative Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: NSJP_0484
symbol: NSJP_0484
gene_biotype: protein_coding
description:
  Putative Cell division protein ZapB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0485
symbol: NSJP_0485
gene_biotype: protein_coding
description:
  Putative Soluble lytic murein transglycosylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0486
symbol: rlmN
gene_biotype: protein_coding
description:
  Dual-specificity RNA methyltransferase RlmN 2; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: NSJP_0487
symbol: NSJP_0487
gene_biotype: protein_coding
description:
  Putative Zn-dependent peptidase, M16 family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the peptidase M16 family.


ensembl_gene_id: NSJP_0488
symbol: NSJP_0488
gene_biotype: protein_coding
description:
  Putative Zn-dependent peptidase, M16 family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0490
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: NSJP_0491
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: NSJP_0492
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: NSJP_0494
symbol: NSJP_0494
gene_biotype: protein_coding
description:
  Putative ATP synthase F0, subunit I (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0496
symbol: NSJP_0496
gene_biotype: protein_coding
description:
  Putative Aminodeoxychorismate lyase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0497
symbol: NSJP_0497
gene_biotype: protein_coding
description:
  Putative Lytic murein transglycosylase (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0510
symbol: NSJP_0510
gene_biotype: protein_coding
description:
  Putative Phosphate regulon transcriptional regulatory protein PhoB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0513
symbol: NSJP_0513
gene_biotype: protein_coding
description:
  Maf-like protein PTH_0815; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: NSJP_0519
symbol: NSJP_0519
gene_biotype: protein_coding
description:
  Putative Rhomboid serine protease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0520
symbol: NSJP_0520
gene_biotype: protein_coding
description:
  Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0521
symbol: purK
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase, ATPase subunit; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: NSJP_0522
symbol: purE
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase, mutase subunit (modular protein); Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: NSJP_0523
symbol: NSJP_0523
gene_biotype: protein_coding
description:
  Putative Efflux transporter, membrane fusion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0525
symbol: NSJP_0525
gene_biotype: protein_coding
description:
  Putative ABC-type transport system, ATPase and permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0527
symbol: rluF
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase F; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: NSJP_0529
symbol: pdaD
gene_biotype: protein_coding
description:
  Putative pyruvoyl-dependent arginine decarboxylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0533
symbol: NSJP_0533
gene_biotype: protein_coding
description:
  Putative Deoxyhypusine synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0535
symbol: NSJP_0535
gene_biotype: protein_coding
description:
  Putative Acyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0539
symbol: NSJP_0539
gene_biotype: protein_coding
description:
  Putative 4-hydroxyphenylpyruvate dioxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0540
symbol: NSJP_0540
gene_biotype: protein_coding
description:
  Putative dioxygenase VC_1345; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0541
symbol: NSJP_0541
gene_biotype: protein_coding
description:
  Putative Fumarylacetoacetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0542
symbol: NSJP_0542
gene_biotype: protein_coding
description:
  Putative Orotate phosphoribosyltransferase (Modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0543
symbol: NSJP_0543
gene_biotype: protein_coding
description:
  Putative 2-oxoisovalerate dehydrogenase, alpha subunit (TPP-binding module); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0545
symbol: NSJP_0545
gene_biotype: protein_coding
description:
  Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0547
symbol: mmgB
gene_biotype: protein_coding
description:
  Putative 3-hydroxybutyryl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0549
symbol: yliK
gene_biotype: protein_coding
description:
  Lactamase_B domain-containing protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme;fragment of methylmalonyl-CoA mutase (part 1).


ensembl_gene_id: NSJP_0551
symbol: pccB
gene_biotype: protein_coding
description:
  Propionyl-CoA carboxylase; Function of homologous gene experimentally demonstrated in an other organism; enzyme;fragment of methylmalonyl-CoA mutase (part 2).


ensembl_gene_id: NSJP_0552
symbol: NSJP_0552
gene_biotype: protein_coding
description:
  Putative Enoyl-CoA hydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0555
symbol: fadB
gene_biotype: protein_coding
description:
  Putative enoyl-CoA hydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: NSJP_0557
symbol: prpB
gene_biotype: protein_coding
description:
  2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate.


ensembl_gene_id: NSJP_0558
symbol: prpC
gene_biotype: protein_coding
description:
  2-methylcitrate synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the citrate synthase family.


ensembl_gene_id: NSJP_0559
symbol: NSJP_0559
gene_biotype: protein_coding
description:
  Putative 2-succinylbenzoate--CoA ligase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0564
symbol: glnS
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: NSJP_0567
symbol: gltX
gene_biotype: protein_coding
description:
  Glutamate--tRNA ligase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: NSJP_0568
symbol: NSJP_0568
gene_biotype: protein_coding
description:
  Putative Ferredoxin reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0570
symbol: NSJP_0570
gene_biotype: protein_coding
description:
  Putative Transcription factor IscR; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0571
symbol: iscS
gene_biotype: protein_coding
description:
  Cysteine desulfurase (tRNA sulfurtransferase), PLP-dependent; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.


ensembl_gene_id: NSJP_0572
symbol: iscU
gene_biotype: protein_coding
description:
  Iron-binding protein believed to be involved in Fe-S protein formation or repair; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.


ensembl_gene_id: NSJP_0573
symbol: iscA
gene_biotype: protein_coding
description:
  FeS cluster assembly protein; Function of homologous gene experimentally demonstrated in an other organism; factor; Belongs to the HesB/IscA family.


ensembl_gene_id: NSJP_0576
symbol: yfhJ
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Homologs of previously reported genes of unknown function; putative factor.


ensembl_gene_id: NSJP_0578
symbol: bipA
gene_biotype: protein_coding
description:
  GTP-binding protein; Function of homologous gene experimentally demonstrated in an other organism; factor.


ensembl_gene_id: NSJP_0581
symbol: NSJP_0581
gene_biotype: protein_coding
description:
  Putative Thioredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0585
symbol: NSJP_0585
gene_biotype: protein_coding
description:
  Putative 6-pyruvoyl-tetrahydropterin synthase (Modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0587
symbol: NSJP_0587
gene_biotype: protein_coding
description:
  Putative Fe-S oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0589
symbol: rmlC
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: NSJP_0596
symbol: NSJP_0596
gene_biotype: protein_coding
description:
  Putative Integrase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the 'phage' integrase family.


ensembl_gene_id: NSJP_0628
symbol: NSJP_0628
gene_biotype: protein_coding
description:
  Putative Exported protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0645
symbol: NSJP_0645
gene_biotype: protein_coding
description:
  Putative Lipoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0647
symbol: sat/cysC
gene_biotype: protein_coding
description:
  Putative bifunctional SAT/APS kinase [Includes: Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate.


ensembl_gene_id: NSJP_0658
symbol: NSJP_0658
gene_biotype: protein_coding
description:
  Putative 3-hydroxydecyl-(Acyl carrier protein) dehydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0660
symbol: NSJP_0660
gene_biotype: protein_coding
description:
  Beta-ketoacyl synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: NSJP_0662
symbol: NSJP_0662
gene_biotype: protein_coding
description:
  Putative transmembrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0664
symbol: NSJP_0664
gene_biotype: protein_coding
description:
  Putative dehydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0667
symbol: NSJP_0667
gene_biotype: protein_coding
description:
  Putative xylanase/chitin deacetylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0670
symbol: NSJP_0670
gene_biotype: protein_coding
description:
  Putative Regulatory protein, MerR family, Cobalamin B12-binding (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0690
symbol: NSJP_0690
gene_biotype: protein_coding
description:
  Putative secreted protein (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0693
symbol: NSJP_0693
gene_biotype: protein_coding
description:
  Putative Cytochrome c; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0716
symbol: NSJP_0716
gene_biotype: protein_coding
description:
  Putative Glycosyl transferase, family 39; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0719
symbol: NSJP_0719
gene_biotype: protein_coding
description:
  Putative Peptidase M; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0721
symbol: ftsY
gene_biotype: protein_coding
description:
  Signal recognition particle receptor FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: NSJP_0722
symbol: ybeY
gene_biotype: protein_coding
description:
  Endoribonuclease YbeY; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: NSJP_0723
symbol: ybeZ
gene_biotype: protein_coding
description:
  Putative enzyme with nucleoside triphosphate hydrolase domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: NSJP_0727
symbol: NSJP_0727
gene_biotype: protein_coding
description:
  Putative Type IV pilus assembly protein PilX; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0728
symbol: NSJP_0728
gene_biotype: protein_coding
description:
  Putative Type IV pilus assembly protein PilW; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0729
symbol: NSJP_0729
gene_biotype: protein_coding
description:
  Putative Type IV pilus assembly protein PilV; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0730
symbol: NSJP_0730
gene_biotype: protein_coding
description:
  Putative Type IV pilin PilA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0733
symbol: NSJP_0733
gene_biotype: protein_coding
description:
  Putative Type IV pilus assembly protein PilB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0738
symbol: pilD
gene_biotype: protein_coding
description:
  Type 4 prepilin-like proteins leader peptide-processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: NSJP_0740
symbol: yacO
gene_biotype: protein_coding
description:
  Putative TrmH family tRNA/rRNA methyltransferase YacO; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: NSJP_0743
symbol: surE
gene_biotype: protein_coding
description:
  5'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: NSJP_0746
symbol: NSJP_0746
gene_biotype: protein_coding
description:
  Uncharacterized AIPM/Hcit synthase family transferase aq_356; Belongs to the alpha-IPM synthase/homocitrate synthase family.


ensembl_gene_id: NSJP_0748
symbol: apgM
gene_biotype: protein_coding
description:
  Putative 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0749
symbol: thrC
gene_biotype: protein_coding
description:
  Threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine.


ensembl_gene_id: NSJP_0751
symbol: yfdZ
gene_biotype: protein_coding
description:
  Putative aminotransferase, PLP-dependent; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: NSJP_0752
symbol: pdxJ
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate synthase; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.


ensembl_gene_id: NSJP_0753
symbol: nnr
gene_biotype: protein_coding
description:
  ADP-dependent (S)-NAD(P)H-hydrate dehydratase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to all [...]


ensembl_gene_id: NSJP_0756
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: NSJP_0761
symbol: pnp
gene_biotype: protein_coding
description:
  Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: NSJP_0762
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal subunit protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: NSJP_0763
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: NSJP_0764
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: NSJP_0766
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: NSJP_0767
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription termination/antitermination protein NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: NSJP_0768
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: NSJP_0771
symbol: NSJP_0771
gene_biotype: protein_coding
description:
  Putative 2Fe-2S ferredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0778
symbol: NSJP_0778
gene_biotype: protein_coding
description:
  Putative Spermidine synthase modulated with MFS-type transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0797
symbol: NSJP_0797
gene_biotype: protein_coding
description:
  Putative Formimidoyltransferase-cyclodeaminase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0798
symbol: NSJP_0798
gene_biotype: protein_coding
description:
  Putative Sulfurtransferase TusA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: NSJP_0802
symbol: NSJP_0802
gene_biotype: protein_coding
description:
  Putative Glutathione-regulated potassium-efflux system; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: NSJP_0803
symbol: NSJP_0803
gene_biotype: protein_coding
description:
  Putative Hydrolase, HAD-superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0807
symbol: NSJP_0807
gene_biotype: protein_coding
description:
  Putative Glutathione transferase FosA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0809
symbol: NSJP_0809
gene_biotype: protein_coding
description:
  Putative Uroporphyrinogen III synthase HemD (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0816
symbol: nxrB
gene_biotype: protein_coding
description:
  Putative Nitrate oxidoreductase, beta subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0817
symbol: nxrA
gene_biotype: protein_coding
description:
  Putative Nitrate oxidoreductase, alpha subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: NSJP_0820
symbol: adhA
gene_biotype: protein_coding
description:
  Putative alcohol dehydrogenase AdhA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0823
symbol: tdh
gene_biotype: protein_coding
description:
  Threonine 3-dehydrogenase, NAD(P)-binding; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: NSJP_0824
symbol: kbl
gene_biotype: protein_coding
description:
  Glycine C-acetyltransferase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA.


ensembl_gene_id: NSJP_0826
symbol: NSJP_0826
gene_biotype: protein_coding
description:
  Putative Peptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0833
symbol: NSJP_0833
gene_biotype: protein_coding
description:
  Putative Peptidase, family M48; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0835
symbol: NSJP_0835
gene_biotype: protein_coding
description:
  Putative Amidohydrolase 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0838
symbol: NSJP_0838
gene_biotype: protein_coding
description:
  Putative general secretion pathway protein D; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0849
symbol: ku-2
gene_biotype: protein_coding
description:
  Putative DNA repair protein CathTA2_1346; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.


ensembl_gene_id: NSJP_0859
symbol: NSJP_0859
gene_biotype: protein_coding
description:
  Putative pterin-4-alpha-carbinolamine dehydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0864
symbol: NSJP_0864
gene_biotype: protein_coding
description:
  Putative Phage integrase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0865
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: NSJP_0867
symbol: holA
gene_biotype: protein_coding
description:
  Putative DNA polymerase III, delta subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0869
symbol: leuS
gene_biotype: protein_coding
description:
  leucyl-tRNA synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: NSJP_0870
symbol: NSJP_0870
gene_biotype: protein_coding
description:
  Putative Methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0871
symbol: NSJP_0871
gene_biotype: protein_coding
description:
  Putative HAD-like hydrolase, purine nucleotidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0873
symbol: der
gene_biotype: protein_coding
description:
  GTPase Der; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: NSJP_0876
symbol: NSJP_0876
gene_biotype: protein_coding
description:
  Putative RNA polymerase sigma-E factor (Sigma-24); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: NSJP_0881
symbol: aat
gene_biotype: protein_coding
description:
  leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: NSJP_0884
symbol: NSJP_0884
gene_biotype: protein_coding
description:
  Putative Peptidase M20; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0889
symbol: kdpE
gene_biotype: protein_coding
description:
  DNA-binding response regulator in two-component regulatory system with KdpD; Function of homologous gene experimentally demonstrated in an other organism; regulator.


ensembl_gene_id: NSJP_0890
symbol: kdpD
gene_biotype: protein_coding
description:
  Fused sensory histidine kinase in two-component regulatory system with KdpE: signal sensing protein; Function of homologous gene experimentally demonstrated in an other organism; regulator.


ensembl_gene_id: NSJP_0891
symbol: kdpC
gene_biotype: protein_coding
description:
  Potassium translocating ATPase, subunit C; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.


ensembl_gene_id: NSJP_0892
symbol: kdpB
gene_biotype: protein_coding
description:
  Potassium translocating ATPase, subunit B; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily.


ensembl_gene_id: NSJP_0893
symbol: kdpA
gene_biotype: protein_coding
description:
  Potassium translocating ATPase, subunit A; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane.


ensembl_gene_id: NSJP_0899
symbol: NSJP_0899
gene_biotype: protein_coding
description:
  Putative Peptidase M50; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0900
symbol: NSJP_0900
gene_biotype: protein_coding
description:
  Putative Hydrolase with N-terminal DNA-binding domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0902
symbol: NSJP_0902
gene_biotype: protein_coding
description:
  Putative Peptidase M16; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0904
symbol: NSJP_0904
gene_biotype: protein_coding
description:
  Putative Phosphoglycolate phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0907
symbol: NSJP_0907
gene_biotype: protein_coding
description:
  Putative 6-phosphofructokinase (Modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0908
symbol: NSJP_0908
gene_biotype: protein_coding
description:
  Putative Guanyl-specific ribonuclease Sa; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0909
symbol: NSJP_0909
gene_biotype: protein_coding
description:
  Putative Ribonuclease inhibitor Barstar (Modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0912
symbol: hemL
gene_biotype: protein_coding
description:
  Glutamate-1-semialdehyde aminotransferase (aminomutase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: NSJP_0917
symbol: NSJP_0917
gene_biotype: protein_coding
description:
  Putative S23 ribosomal; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0920
symbol: qmcA
gene_biotype: protein_coding
description:
  Putative Protease QmcA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0921
symbol: gmhA
gene_biotype: protein_coding
description:
  Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate; Belongs to the SIS family. GmhA subfamily.


ensembl_gene_id: NSJP_0924
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: NSJP_0925
symbol: rfaEb
gene_biotype: protein_coding
description:
  D-beta-D-heptose 1-phosphate adenosyltransferase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose.


ensembl_gene_id: NSJP_0926
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair-coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: NSJP_0927
symbol: NSJP_0927
gene_biotype: protein_coding
description:
  Putative Peptidylprolyl isomerase, PpiC-type; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0928
symbol: NSJP_0928
gene_biotype: protein_coding
description:
  Putative Peptidylprolyl isomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0929
symbol: engB
gene_biotype: protein_coding
description:
  Putative GTP-binding protein EngB; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: NSJP_0930
symbol: mtgA
gene_biotype: protein_coding
description:
  Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.


ensembl_gene_id: NSJP_0931
symbol: NSJP_0931
gene_biotype: protein_coding
description:
  Putative Glyoxalase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0934
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyr-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: NSJP_0936
symbol: mviN
gene_biotype: protein_coding
description:
  Protein MurJ homolog; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: NSJP_0946
symbol: NSJP_0946
gene_biotype: protein_coding
description:
  Putative Oxidoreductase with FAD/NAD(P)-binding domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0957
symbol: NSJP_0957
gene_biotype: protein_coding
description:
  Mercuric reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0960
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase (isomerase), subunit with LeuD; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: NSJP_0961
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate isomerase subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: NSJP_0963
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium transport protein CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: NSJP_0964
symbol: NSJP_0964
gene_biotype: protein_coding
description:
  Putative Inositol-phosphate phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0971
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase MsrA; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: NSJP_0975
symbol: NSJP_0975
gene_biotype: protein_coding
description:
  Putative Peptidase U62, TldE-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0983
symbol: NSJP_0983
gene_biotype: protein_coding
description:
  Putative dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.


ensembl_gene_id: NSJP_0985
symbol: yjjK
gene_biotype: protein_coding
description:
  Fused putative transporter subunits of ABC superfamily: ATP-binding components; Function of strongly homologous gene; putative transporter.


ensembl_gene_id: NSJP_0988
symbol: NSJP_0988
gene_biotype: protein_coding
description:
  Putative Carboxylesterase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0990
symbol: ydiU
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.


ensembl_gene_id: NSJP_0992
symbol: NSJP_0992
gene_biotype: protein_coding
description:
  Putative NADH-quinone oxidoreductase, subunit L; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_0994
symbol: NSJP_0994
gene_biotype: protein_coding
description:
  Putative NADH-quinone oxidoreductase, subunit M; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1001
symbol: NSJP_1001
gene_biotype: protein_coding
description:
  Conserved protein of unknown function; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: NSJP_1003
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA, DNA-binding transcriptional dual regulator; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: NSJP_1004
symbol: dnaN
gene_biotype: protein_coding
description:
  DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of  [...]


ensembl_gene_id: NSJP_1005
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase, subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: NSJP_1006
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase (type II topoisomerase), subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP [...]


ensembl_gene_id: NSJP_1009
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: NSJP_1011
symbol: NSJP_1011
gene_biotype: protein_coding
description:
  Putative Quercetin 2,3-dioxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the pirin family.


ensembl_gene_id: NSJP_1014
symbol: NSJP_1014
gene_biotype: protein_coding
description:
  Putative thiol oxidoreductase, DsbA family, FrnE subfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1020
symbol: ybaL
gene_biotype: protein_coding
description:
  Putative monovalent cation:proton antiporter (CPA2 family); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: NSJP_1022
symbol: pqqB
gene_biotype: protein_coding
description:
  Coenzyme PQQ synthesis protein B; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family.


ensembl_gene_id: NSJP_1023
symbol: pqqC
gene_biotype: protein_coding
description:
  Pyrroloquinoline-quinone synthase; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ.


ensembl_gene_id: NSJP_1024
symbol: NSJP_1024
gene_biotype: protein_coding
description:
  Putative Coenzyme PQQ synthesis protein D; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1025
symbol: pqqE
gene_biotype: protein_coding
description:
  Coenzyme PQQ synthesis protein E; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).


ensembl_gene_id: NSJP_1027
symbol: osmC
gene_biotype: protein_coding
description:
  Osmotically inducible, stress-inducible membrane protein; Function of homologous gene experimentally demonstrated in an other organism; membrane component.


ensembl_gene_id: NSJP_1028
symbol: NSJP_1028
gene_biotype: protein_coding
description:
  Putative Metallo-beta-lactamase family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1037
symbol: ttgA
gene_biotype: protein_coding
description:
  RND efflux system, membrane fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: NSJP_1038
symbol: acrB
gene_biotype: protein_coding
description:
  Multidrug efflux system protein; Function of homologous gene experimentally demonstrated in an other organism; transporter; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: NSJP_1045
symbol: NSJP_1045
gene_biotype: protein_coding
description:
  Putative Oxidoreductase, NmrA-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1046
symbol: NSJP_1046
gene_biotype: protein_coding
description:
  Putative Endoribonuclease L-PSP, YjgF-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1056
symbol: NSJP_1056
gene_biotype: protein_coding
description:
  Putative Amino acid/polyamine/organocation transporter, APC superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1059
symbol: NSJP_1059
gene_biotype: protein_coding
description:
  Putative Radical SAM protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1062
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: NSJP_1063
symbol: NSJP_1063
gene_biotype: protein_coding
description:
  Putative Universal stress protein UspA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1066
symbol: NSJP_1066
gene_biotype: protein_coding
description:
  Putative Universal stress protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1067
symbol: NSJP_1067
gene_biotype: protein_coding
description:
  Putative Blue copper protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1074
symbol: NSJP_1074
gene_biotype: protein_coding
description:
  Putative Cytochrome c552; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1085
symbol: NSJP_1085
gene_biotype: protein_coding
description:
  Putative Phosphoribosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1091
symbol: NSJP_1091
gene_biotype: protein_coding
description:
  Putative Acyl-CoA synthetase (NDP forming); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1093
symbol: NSJP_1093
gene_biotype: protein_coding
description:
  Putative Multihaem cytochrome c; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1094
symbol: NSJP_1094
gene_biotype: protein_coding
description:
  Putative Sulfite:cytochrome c oxidoreductase, subunit B; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1095
symbol: NSJP_1095
gene_biotype: protein_coding
description:
  Putative Sulfite:cytochrome c oxidoreductase, subunit A; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1098
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: NSJP_1106
symbol: NSJP_1106
gene_biotype: protein_coding
description:
  Putative Secretion protein HlyD; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1115
symbol: NSJP_1115
gene_biotype: protein_coding
description:
  Putative Response regulator, CheY-like (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1123
symbol: pal-2
gene_biotype: protein_coding
description:
  Peptidoglycan-associated protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the Pal lipoprotein family.


ensembl_gene_id: NSJP_1131
symbol: yjbJ
gene_biotype: protein_coding
description:
  Putative stress response protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor; Belongs to the UPF0337 (CsbD) family.


ensembl_gene_id: NSJP_1143
symbol: NSJP_1143
gene_biotype: protein_coding
description:
  Putative Response regulator, CheY-like (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1150
symbol: NSJP_1150
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase/reductase SDR; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: NSJP_1152
symbol: qxtB
gene_biotype: protein_coding
description:
  Putative terminal oxidase subunit II; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1159
symbol: NSJP_1159
gene_biotype: protein_coding
description:
  Putative Hemerythrin HHE cation binding domain-containing protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1160
symbol: NSJP_1160
gene_biotype: protein_coding
description:
  Putative ROK family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1169
symbol: NSJP_1169
gene_biotype: protein_coding
description:
  Putative phosphoesterase, ICC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1172
symbol: NSJP_1172
gene_biotype: protein_coding
description:
  Putative Glycosyl transferase, group 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1173
symbol: ligD
gene_biotype: protein_coding
description:
  Multifunctional non-homologous end joining protein LigD [Includes: 3'-phosphoesterase; DNA ligase D; DNA repair polymerase].


ensembl_gene_id: NSJP_1174
symbol: NSJP_1174
gene_biotype: protein_coding
description:
  Putative Cyclic nucleotide-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1175
symbol: NSJP_1175
gene_biotype: protein_coding
description:
  Putative Transcriptional regulator, Crp/Fnr family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1177
symbol: NSJP_1177
gene_biotype: protein_coding
description:
  Putative Permease, MFS family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1178
symbol: NSJP_1178
gene_biotype: protein_coding
description:
  Putative Amylo-alpha-1,6-glucosidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1179
symbol: ydaP
gene_biotype: protein_coding
description:
  Putative thiamine pyrophosphate-containing protein YdaP; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the TPP enzyme family.


ensembl_gene_id: NSJP_1194
symbol: ku
gene_biotype: protein_coding
description:
  Non-homologous end joining protein Ku; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.


ensembl_gene_id: NSJP_1195
symbol: NSJP_1195
gene_biotype: protein_coding
description:
  Putative Ribonuclease BN; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1201
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: NSJP_1212
symbol: yxnA
gene_biotype: protein_coding
description:
  Uncharacterized oxidoreductase YxnA; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: NSJP_1218
symbol: NSJP_1218
gene_biotype: protein_coding
description:
  Putative Histidine kinase with N-terminal NAD-binding region; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1219
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: NSJP_1220
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: NSJP_1227
symbol: NSJP_1227
gene_biotype: protein_coding
description:
  Putative Terminase small subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1236
symbol: NSJP_1236
gene_biotype: protein_coding
description:
  Putative Phage integrase family site-specific recombinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the 'phage' integrase family.


ensembl_gene_id: NSJP_1273
symbol: rbpB
gene_biotype: protein_coding
description:
  Putative RNA-binding protein RbpB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1289
symbol: NSJP_1289
gene_biotype: protein_coding
description:
  Putative Filamentous hemagglutinin family N-terminal domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1290
symbol: NSJP_1290
gene_biotype: protein_coding
description:
  Putative Hemolysin activation/secretion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1291
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: NSJP_1297
symbol: NSJP_1297
gene_biotype: protein_coding
description:
  Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1298
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: NSJP_1301
symbol: nuoL
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase, membrane subunit L; Function of homologous gene experimentally demonstrated in an other organism; membrane component.


ensembl_gene_id: NSJP_1302
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: NSJP_1303
symbol: nuoJ
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase, membrane subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: NSJP_1304
symbol: nuoI
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit I; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: NSJP_1305
symbol: NSJP_1305
gene_biotype: protein_coding
description:
  Putative NADH-quinone oxidoreductase, subunit G; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1308
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: NSJP_1309
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: NSJP_1312
symbol: priA
gene_biotype: protein_coding
description:
  Putative Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: NSJP_1316
symbol: NSJP_1316
gene_biotype: protein_coding
description:
  Putative Haloacid dehalogenase superfamily hydrolase, subfamily IB, PSPase-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1317
symbol: queE
gene_biotype: protein_coding
description:
  7-carboxy-7-deazaguanine synthase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: NSJP_1318
symbol: pepA
gene_biotype: protein_coding
description:
  Putative cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: NSJP_1323
symbol: NSJP_1323
gene_biotype: protein_coding
description:
  Putative Gamma-glutamyl-gamma-aminobutyrate hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1327
symbol: tatA-4
gene_biotype: protein_coding
description:
  Twin arginine-targeting protein translocase, TatA/E family (Modular protein); Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: NSJP_1330
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: NSJP_1331
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: NSJP_1332
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: NSJP_1336
symbol: NSJP_1336
gene_biotype: protein_coding
description:
  Putative Leu/Ile/Val-binding protein, periplasmic-binding component of ABC transport system; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1337
symbol: NSJP_1337
gene_biotype: protein_coding
description:
  Putative Outer membrane protein, OmpA/MotB family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1338
symbol: mscL
gene_biotype: protein_coding
description:
  Mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: NSJP_1343
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III, gamma and tau subunits; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: NSJP_1344
symbol: ybaB
gene_biotype: protein_coding
description:
  Conserved hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: NSJP_1345
symbol: recR
gene_biotype: protein_coding
description:
  Gap repair protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: NSJP_1346
symbol: NSJP_1346
gene_biotype: protein_coding
description:
  Putative RNA polymerase-binding protein DksA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1349
symbol: trmFO
gene_biotype: protein_coding
description:
  Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TrmFO; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: NSJP_1350
symbol: xerC
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: NSJP_1351
symbol: argB
gene_biotype: protein_coding
description:
  Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: NSJP_1355
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase RimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: NSJP_1359
symbol: gcvP
gene_biotype: protein_coding
description:
  Glycine decarboxylase, PLP-dependent, subunit (protein P) of glycine cleavage complex; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.


ensembl_gene_id: NSJP_1394
symbol: ybbA
gene_biotype: protein_coding
description:
  Putative transporter subunit: ATP-binding component of ABC superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.


ensembl_gene_id: NSJP_1395
symbol: NSJP_1395
gene_biotype: protein_coding
description:
  Putative Uncharacterized ABC-type transport system, permease component YbbP; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1397
symbol: NSJP_1397
gene_biotype: protein_coding
description:
  Putative Peptidase M1, membrane alanine aminopeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1398
symbol: rpiA
gene_biotype: protein_coding
description:
  Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.


ensembl_gene_id: NSJP_1406
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: NSJP_1407
symbol: NSJP_1407
gene_biotype: protein_coding
description:
  Conserved protein of unknown function; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: NSJP_1408
symbol: yidC
gene_biotype: protein_coding
description:
  Membrane protein insertase YidC; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: NSJP_1409
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: NSJP_1410
symbol: gidA
gene_biotype: protein_coding
description:
  Glucose-inhibited cell-division protein; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: NSJP_1411
symbol: rsmG
gene_biotype: protein_coding
description:
  Putative Ribosomal RNA small subunit methyltransferase G; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: NSJP_1413
symbol: parB
gene_biotype: protein_coding
description:
  Putative chromosome-partitioning protein ParB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the ParB family.


ensembl_gene_id: NSJP_1416
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA-specific 2-thiouridylase MnmA; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: NSJP_1417
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: NSJP_1418
symbol: atpA
gene_biotype: protein_coding
description:
  F1 sector of membrane-bound ATP synthase, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: NSJP_1419
symbol: atpG
gene_biotype: protein_coding
description:
  ATP synthase gamma chain; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: NSJP_1420
symbol: atpD
gene_biotype: protein_coding
description:
  Membrane-bound ATP synthase, F1 sector, beta-subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: NSJP_1421
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase epsilon chain; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: NSJP_1423
symbol: NSJP_1423
gene_biotype: protein_coding
description:
  Uncharacterized RNA pseudouridine synthase aq_1758; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: NSJP_1429
symbol: NSJP_1429
gene_biotype: protein_coding
description:
  Putative Manganese transport system, periplasmic binding component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: NSJP_1430
symbol: anmK
gene_biotype: protein_coding
description:
  Anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.


ensembl_gene_id: NSJP_1435
symbol: NSJP_1435
gene_biotype: protein_coding
description:
  Putative Signal transduction response regulator, receiver and diguanylate cyclase domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1448
symbol: fmt
gene_biotype: protein_coding
description:
  10-formyltetrahydrofolate:L-methionyl-tRNA(fMet) N-formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: NSJP_1449
symbol: rsmB
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: NSJP_1450
symbol: rpe
gene_biotype: protein_coding
description:
  D-ribulose-5-phosphate 3-epimerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the ribulose-phosphate 3-epimerase family.


ensembl_gene_id: NSJP_1451
symbol: pheS
gene_biotype: protein_coding
description:
  Phenylalanine--tRNA ligase alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 2 subfamily.


ensembl_gene_id: NSJP_1452
symbol: pheT
gene_biotype: protein_coding
description:
  Phenylalanyl-tRNA synthetase, beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: NSJP_1453
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal subunit protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: NSJP_1454
symbol: rpmI
gene_biotype: protein_coding
description:
  50S ribosomal subunit protein L35; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL35 family.


ensembl_gene_id: NSJP_1455
symbol: infC
gene_biotype: protein_coding
description:
  Protein chain initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: NSJP_1456
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: NSJP_1457
symbol: hupB-2
gene_biotype: protein_coding
description:
  HU, DNA-binding transcriptional regulator, beta subunit; Function of homologous gene experimentally demonstrated in an other organism; regulator; Belongs to the bacterial histone-like protein family.


ensembl_gene_id: NSJP_1459
symbol: NSJP_1459
gene_biotype: protein_coding
description:
  Putative HTH-type transcriptional regulator, rrf2 family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1460
symbol: NSJP_1460
gene_biotype: protein_coding
description:
  Putative Sulfite reductase, contains SirA-like domain (Modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: NSJP_1461
symbol: cysH
gene_biotype: protein_coding
description:
  Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.


ensembl_gene_id: NSJP_1463
symbol: cysD
gene_biotype: protein_coding
description:
  Sulfate adenylyltransferase, subunit 2; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: NSJP_1469
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: NSJP_1471
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction helicase, subunit B; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: NSJP_1474
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: NSJP_1478
symbol: cmk
gene_biotype: protein_coding
description:
  Cytidylate kinase; Function of strongly homologous gene; enzyme;fragment of bifunctional protein [Includes: putative prephenate or cyclohexadienyl dehydrogenase; 3-phosphoshikimate 1-carboxyvinyltransferase (5-enolpyruvylshikimate-3-phosphate synthase) (EPSP synthase) (EPSPS) (AroA)] (part 2).


ensembl_gene_id: NSJP_1479
symbol: NSJP_1479
gene_biotype: protein_coding
description:
  Putative Acyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1480
symbol: rpsA
gene_biotype: protein_coding
description:
  30S ribosomal subunit protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.


ensembl_gene_id: NSJP_1481
symbol: NSJP_1481
gene_biotype: protein_coding
description:
  Putative Peptidase S49, signal peptide peptidase SppA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1482
symbol: ihfB
gene_biotype: protein_coding
description:
  Integration host factor (IHF), DNA-binding protein, beta subunit; Function of homologous gene experimentally demonstrated in an other organism; regulator; Belongs to the bacterial histone-like protein family.


ensembl_gene_id: NSJP_1489
symbol: NSJP_1489
gene_biotype: protein_coding
description:
  Putative D-alanyl-D-alanine carboxypeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the peptidase S11 family.


ensembl_gene_id: NSJP_1495
symbol: lipB
gene_biotype: protein_coding
description:
  Octanoyltransferase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: NSJP_1497
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: NSJP_1498
symbol: trmI
gene_biotype: protein_coding
description:
  tRNA (adenine(58)-N(1))-methyltransferase TrmI; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA.


ensembl_gene_id: NSJP_1501
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: NSJP_1502
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: NSJP_1517
symbol: ydaO-2
gene_biotype: protein_coding
description:
  Putative C32 tRNA thiolase; Catalyzes the ATP-dependent 2-thiolation of cytidine in position 32 of tRNA, to form 2-thiocytidine (s(2)C32). The sulfur atoms are provided by the cysteine/cysteine desulfurase (IscS) system. Belongs to the TtcA family.


ensembl_gene_id: NSJP_1523
symbol: gpmA
gene_biotype: protein_coding
description:
  Phosphoglyceromutase 1; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: NSJP_1526
symbol: argD
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: NSJP_1527
symbol: argF
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: NSJP_1531
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: NSJP_1532
symbol: dapA
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: NSJP_1533
symbol: dapB
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: NSJP_1536
symbol: tal
gene_biotype: protein_coding
description:
  Putative transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: NSJP_1540
symbol: NSJP_1540
gene_biotype: protein_coding
description:
  Putative Phosphoenolpyruvate synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1541
symbol: NSJP_1541
gene_biotype: protein_coding
description:
  Putative DNA recombination protein RmuC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1544
symbol: panC
gene_biotype: protein_coding
description:
  Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: NSJP_1546
symbol: dapL
gene_biotype: protein_coding
description:
  LL-diaminopimelate aminotransferase; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: NSJP_1560
symbol: NSJP_1560
gene_biotype: protein_coding
description:
  Putative Peptidase S16, lon-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1562
symbol: NSJP_1562
gene_biotype: protein_coding
description:
  Putative Daunorubicin resistance ABC transporter, membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1564
symbol: NSJP_1564
gene_biotype: protein_coding
description:
  Putative Ribonuclease Z; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1567
symbol: NSJP_1567
gene_biotype: protein_coding
description:
  Putative Metallophosphoesterase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1569
symbol: truD
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.


ensembl_gene_id: NSJP_1571
symbol: NSJP_1571
gene_biotype: protein_coding
description:
  Putative Dimethylargininase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1574
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: NSJP_1579
symbol: pdxA
gene_biotype: protein_coding
description:
  4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).


ensembl_gene_id: NSJP_1581
symbol: rsmA
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: NSJP_1585
symbol: NSJP_1585
gene_biotype: protein_coding
description:
  Putative Outer membrane lipoprotein carrier protein LolA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1586
symbol: NSJP_1586
gene_biotype: protein_coding
description:
  Putative 2-oxoglutarate-Fe(II) oxygenase superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1591
symbol: NSJP_1591
gene_biotype: protein_coding
description:
  Putative Radical SAM superfamily protein, Coenzyme PQQ synthesis protein E; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1592
symbol: NSJP_1592
gene_biotype: protein_coding
description:
  Putative Universal stress protein UspA (Modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1594
symbol: ubiE
gene_biotype: protein_coding
description:
  Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2).


ensembl_gene_id: NSJP_1595
symbol: uvrA-2
gene_biotype: protein_coding
description:
  Excinuclease ABC, subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: NSJP_1609
symbol: NSJP_1609
gene_biotype: protein_coding
description:
  Putative two-component sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1612
symbol: NSJP_1612
gene_biotype: protein_coding
description:
  Putative long-chain fatty acid outer membrane transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1613
symbol: uvrC
gene_biotype: protein_coding
description:
  UvrABC system protein C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: NSJP_1614
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase 1; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: NSJP_1616
symbol: NSJP_1616
gene_biotype: protein_coding
description:
  Putative lactoylglutathione lyase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1617
symbol: NSJP_1617
gene_biotype: protein_coding
description:
  Putative N-acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1618
symbol: NSJP_1618
gene_biotype: protein_coding
description:
  Putative polysaccharide deacetylase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1619
symbol: NSJP_1619
gene_biotype: protein_coding
description:
  Putative membrane-associated zinc metallopeptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the peptidase M50B family.


ensembl_gene_id: NSJP_1621
symbol: NSJP_1621
gene_biotype: protein_coding
description:
  Putative tRNA-processing ribonuclease BN; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1622
symbol: nuoN-2
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit N 2; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: NSJP_1623
symbol: nuoM-3
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase, membrane subunit M; Function of homologous gene experimentally demonstrated in an other organism; membrane component.


ensembl_gene_id: NSJP_1625
symbol: nuoK-2
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase, membrane subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: NSJP_1626
symbol: nuoJ-2
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: NSJP_1628
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit H 2; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: NSJP_1629
symbol: NSJP_1629
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.


ensembl_gene_id: NSJP_1630
symbol: nuoF-2
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase, chain F; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 51 kDa subunit family.


ensembl_gene_id: NSJP_1632
symbol: nuoC
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit C/D 2; In the N-terminal section; belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: NSJP_1633
symbol: nuoB-2
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit B 1; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: NSJP_1638
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit, ATPase; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: NSJP_1640
symbol: NSJP_1640
gene_biotype: protein_coding
description:
  Putative TonB protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1642
symbol: NSJP_1642
gene_biotype: protein_coding
description:
  Putative Thiol-disulfide oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1644
symbol: NSJP_1644
gene_biotype: protein_coding
description:
  Putative TonB-dependent receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1658
symbol: NSJP_1658
gene_biotype: protein_coding
description:
  Putative Disulfide oxidoreductase dsbA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1662
symbol: NSJP_1662
gene_biotype: protein_coding
description:
  Putative Cation efflux system protein CzcC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1663
symbol: NSJP_1663
gene_biotype: protein_coding
description:
  Putative Secretion protein HlyD; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: NSJP_1669
symbol: NSJP_1669
gene_biotype: protein_coding
description:
  Putative nickel-responsive regulator; Transcriptional regulator; Belongs to the transcriptional regulatory CopG/NikR family.


ensembl_gene_id: NSJP_1673
symbol: hldD
gene_biotype: protein_coding
description:
  ADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily.


ensembl_gene_id: NSJP_1674
symbol: NSJP_1674
gene_biotype: protein_coding
description:
  Putative 3-methyladenine DNA glycosylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the DNA glycosylase MPG family.


ensembl_gene_id: NSJP_1681
symbol: dfrA
gene_biotype: protein_coding
description:
  Putative dihydroflavonol-4-reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1685
symbol: NSJP_1685
gene_biotype: protein_coding
description:
  Putative Antibiotic biosynthesis monooxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1688
symbol: nrdA
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: NSJP_1689
symbol: NSJP_1689
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.


ensembl_gene_id: NSJP_1691
symbol: cfa
gene_biotype: protein_coding
description:
  Cyclopropane fatty acyl phospholipid synthase (unsaturated-phospholipid methyltransferase); Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: NSJP_1700
symbol: NSJP_1700
gene_biotype: protein_coding
description:
  Putative FMN reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1704
symbol: acrB-2
gene_biotype: protein_coding
description:
  Acriflavin resistance protein acrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: NSJP_1705
symbol: NSJP_1705
gene_biotype: protein_coding
description:
  Putative Acriflavine resistance protein acrA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: NSJP_1706
symbol: NSJP_1706
gene_biotype: protein_coding
description:
  Putative Transcriptional regulator acrR; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1716
symbol: NSJP_1716
gene_biotype: protein_coding
description:
  Putative Sugar nucleotidyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1717
symbol: NSJP_1717
gene_biotype: protein_coding
description:
  Putative sugar nucleotidyltransferase and phosphatidyltransferase (Bifunctional enzyme); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: NSJP_1725
symbol: mraW
gene_biotype: protein_coding
description:
  S-adenosyl-dependent methyltransferase activity on membrane-located substrates; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: NSJP_1728
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: NSJP_1729
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: NSJP_1730
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: NSJP_1731
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: NSJP_1733
symbol: murG
gene_biotype: protein_coding
description:
  Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: NSJP_1738
symbol: ftsA
gene_biotype: protein_coding
description:
  ATP-binding cell division protein involved in recruitment of FtsK to Z ring; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: NSJP_1739
symbol: ftsZ
gene_biotype: protein_coding
description:
  GTP-binding tubulin-like cell division protein; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: NSJP_1741
symbol: NSJP_1741
gene_biotype: protein_coding
description:
  Homologs of previously reported genes of unknown function; Belongs to the multicopper oxidase YfiH/RL5 family.


ensembl_gene_id: NSJP_1742
symbol: NSJP_1742
gene_biotype: protein_coding
description:
  Conserved protein of unknown function; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: NSJP_1743
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: NSJP_1745
symbol: NSJP_1745
gene_biotype: protein_coding
description:
  Putative Cell division protein DivIVA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1746
symbol: NSJP_1746
gene_biotype: protein_coding
description:
  Putative Esterase, beta-lactamase family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1748
symbol: pgsA
gene_biotype: protein_coding
description:
  CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: NSJP_1750
symbol: NSJP_1750
gene_biotype: protein_coding
description:
  Putative Sensor protein PilS; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1752
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: NSJP_1753
symbol: prsA
gene_biotype: protein_coding
description:
  Phosphoribosylpyrophosphate synthase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: NSJP_1754
symbol: rplY
gene_biotype: protein_coding
description:
  50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: NSJP_1755
symbol: pth
gene_biotype: protein_coding
description:
  Peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: NSJP_1756
symbol: ychF
gene_biotype: protein_coding
description:
  Putative GTP-binding protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: NSJP_1760
symbol: NSJP_1760
gene_biotype: protein_coding
description:
  Putative DNA polymerase IV; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1764
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal subunit protein S18 (modular protein); Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: NSJP_1767
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: NSJP_1768
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: NSJP_1769
symbol: fabD
gene_biotype: protein_coding
description:
  malonyl-CoA-[acyl-carrier-protein] transacylase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: NSJP_1770
symbol: fabG-3
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: NSJP_1772
symbol: fabF
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: NSJP_1773
symbol: rnc
gene_biotype: protein_coding
description:
  Ribonuclease 3; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: NSJP_1774
symbol: ppiA
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: NSJP_1775
symbol: ppi
gene_biotype: protein_coding
description:
  Putative peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: NSJP_1779
symbol: folD
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: NSJP_1781
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: NSJP_1782
symbol: NSJP_1782
gene_biotype: protein_coding
description:
  Putative sterol desaturase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1784
symbol: queF
gene_biotype: protein_coding
description:
  NADPH-dependent 7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.


ensembl_gene_id: NSJP_1805
symbol: sucC
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase, beta subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: NSJP_1807
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase alpha chain; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: NSJP_1818
symbol: ahcY
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: NSJP_1819
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase 1; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: NSJP_1820
symbol: NSJP_1820
gene_biotype: protein_coding
description:
  Putative Cytochrome c biogenesis protein, ResB-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1829
symbol: pit
gene_biotype: protein_coding
description:
  Putative low-affinity inorganic phosphate transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1830
symbol: NSJP_1830
gene_biotype: protein_coding
description:
  Putative Phosphate regulon sensor histidine kinase PhoR; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1831
symbol: phoB
gene_biotype: protein_coding
description:
  DNA-binding response regulator in two-component regulatory system with PhoR (or CreC); Function of homologous gene experimentally demonstrated in an other organism; regulator.


ensembl_gene_id: NSJP_1832
symbol: ispH
gene_biotype: protein_coding
description:
  1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate reductase, 4Fe-4S protein; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: NSJP_1835
symbol: smc
gene_biotype: protein_coding
description:
  Chromosome partition protein Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: NSJP_1837
symbol: NSJP_1837
gene_biotype: protein_coding
description:
  Putative Adenosylhomocysteine nucleosidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1838
symbol: yrbE
gene_biotype: protein_coding
description:
  Toluene transporter subunit: membrane component of ABC superfamily; Function of strongly homologous gene; transporter; Belongs to the MlaE permease family.


ensembl_gene_id: NSJP_1839
symbol: yrbF
gene_biotype: protein_coding
description:
  Putative ABC transporter, ATPase component, ATP-dependent toluene efflux transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1840
symbol: yrbD
gene_biotype: protein_coding
description:
  Putative ABC transporter, periplasmic binding component, ATP-dependent toluene efflux transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1841
symbol: NSJP_1841
gene_biotype: protein_coding
description:
  Putative ABC transporter, auxiliary component, ATP-dependent toluene efflux transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1842
symbol: NSJP_1842
gene_biotype: protein_coding
description:
  Putative Surface antigen D15; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1843
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase 1; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: NSJP_1844
symbol: ispG
gene_biotype: protein_coding
description:
  1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: NSJP_1852
symbol: NSJP_1852
gene_biotype: protein_coding
description:
  Putative Quinol-cytochrome c reductase, cytochrome b subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1861
symbol: NSJP_1861
gene_biotype: protein_coding
description:
  Protein of unknown function; No homology to any previously reported sequences; Belongs to the 'phage' integrase family.


ensembl_gene_id: NSJP_1873
symbol: NSJP_1873
gene_biotype: protein_coding
description:
  Putative Ferric uptake regulation protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the Fur family.


ensembl_gene_id: NSJP_1878
symbol: rpsN
gene_biotype: protein_coding
description:
  30S ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site; Belongs to the universal ribosomal protein uS14 family.


ensembl_gene_id: NSJP_1879
symbol: yciC
gene_biotype: protein_coding
description:
  Putative metal chaperone YciC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1881
symbol: NSJP_1881
gene_biotype: protein_coding
description:
  Putative GCN5-related N-acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1910
symbol: NSJP_1910
gene_biotype: protein_coding
description:
  Putative Integrase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the 'phage' integrase family.


ensembl_gene_id: NSJP_1911
symbol: NSJP_1911
gene_biotype: protein_coding
description:
  Putative DNA-binding protein, Excisionase family (Modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1934
symbol: NSJP_1934
gene_biotype: protein_coding
description:
  Putative maltose O-acetyltransferase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1973
symbol: NSJP_1973
gene_biotype: protein_coding
description:
  Putative transmembrane signal transduction receptor and sigma-54 dependent response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1983
symbol: NSJP_1983
gene_biotype: protein_coding
description:
  Putative Proteasome, beta subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1984
symbol: NSJP_1984
gene_biotype: protein_coding
description:
  Putative Proteasome, alpha subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1986
symbol: NSJP_1986
gene_biotype: protein_coding
description:
  Putative Hydrolase, alpha/beta fold family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_1999
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: NSJP_2001
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor RF-1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: NSJP_2002
symbol: prmC
gene_biotype: protein_coding
description:
  Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: NSJP_2003
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: NSJP_2004
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: NSJP_2005
symbol: hisD
gene_biotype: protein_coding
description:
  Bifunctional histidinal dehydrogenase and histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: NSJP_2008
symbol: NSJP_2008
gene_biotype: protein_coding
description:
  Putative Peptidase M48, Ste24p; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2012
symbol: ilvI
gene_biotype: protein_coding
description:
  Acetolactate synthase III, large subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the TPP enzyme family.


ensembl_gene_id: NSJP_2013
symbol: ilvH
gene_biotype: protein_coding
description:
  Acetolactate synthase III, thiamin-dependent, small subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: NSJP_2014
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: NSJP_2015
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase proenzyme; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: NSJP_2016
symbol: pssA
gene_biotype: protein_coding
description:
  CDP-diacylglycerol-serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: NSJP_2017
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: NSJP_2019
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: NSJP_2021
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: NSJP_2023
symbol: NSJP_2023
gene_biotype: protein_coding
description:
  Putative Amidase enhancer protein LytB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2024
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: NSJP_2025
symbol: NSJP_2025
gene_biotype: protein_coding
description:
  Putative Peptidyl-prolyl cis-trans isomerase D; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2027
symbol: mreB
gene_biotype: protein_coding
description:
  Cell wall structural complex MreBCD, actin-like component MreB; Function of homologous gene experimentally demonstrated in an other organism; structure.


ensembl_gene_id: NSJP_2029
symbol: NSJP_2029
gene_biotype: protein_coding
description:
  Putative Cell shape-determining protein MreD; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2031
symbol: mrdB
gene_biotype: protein_coding
description:
  Rod shape-determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: NSJP_2032
symbol: rng
gene_biotype: protein_coding
description:
  Ribonuclease G; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: NSJP_2033
symbol: smf
gene_biotype: protein_coding
description:
  Putative Protein SMF, DNA protecting protein DprA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2034
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase 1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: NSJP_2035
symbol: bfr
gene_biotype: protein_coding
description:
  Bacterioferritin, iron storage and detoxification protein; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.


ensembl_gene_id: NSJP_2036
symbol: bfr-2
gene_biotype: protein_coding
description:
  Bacterioferritin; Iron-storage protein, whose ferroxidase center binds Fe(2+) ions, oxidizes them by dioxygen to Fe(3+), and participates in the subsequent Fe(3+) oxide mineral core formation within the central cavity of the protein complex; Belongs to the bacterioferritin family.


ensembl_gene_id: NSJP_2046
symbol: NSJP_2046
gene_biotype: protein_coding
description:
  Putative Thiamine biosynthesis lipoprotein ApbE; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: NSJP_2052
symbol: NSJP_2052
gene_biotype: protein_coding
description:
  Thermostable carboxypeptidase 1; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.


ensembl_gene_id: NSJP_2054
symbol: sugE
gene_biotype: protein_coding
description:
  Multidrug efflux system protein; Function of homologous gene experimentally demonstrated in an other organism; transporter.


ensembl_gene_id: NSJP_2055
symbol: czcA
gene_biotype: protein_coding
description:
  Cation efflux system protein CzcA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: NSJP_2056
symbol: NSJP_2056
gene_biotype: protein_coding
description:
  Putative Heavy metal efflux system, membrane fusion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: NSJP_2057
symbol: NSJP_2057
gene_biotype: protein_coding
description:
  Putative Heavy metal efflux system, outer membrane lipoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2058
symbol: NSJP_2058
gene_biotype: protein_coding
description:
  Putative Chemotaxis protein CheY; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2063
symbol: NSJP_2063
gene_biotype: protein_coding
description:
  Putative uncharacterized transporter yedA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2071
symbol: NSJP_2071
gene_biotype: protein_coding
description:
  Putative Outer membrane protein and related peptidoglycan-associated (Lipo)protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2075
symbol: NSJP_2075
gene_biotype: protein_coding
description:
  Putative Aminomethyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the GcvT family.


ensembl_gene_id: NSJP_2079
symbol: thi4
gene_biotype: protein_coding
description:
  Putative ribose 1,5-bisphosphate isomerase; Involved in the biosynthesis of the thiazole moiety of thiamine. Catalyzes the conversion of NAD and glycine to adenosine diphosphate 5-(2-hydroxyethyl)-4-methylthiazole-2-carboxylate (ADT), an adenylated thiazole intermediate, using free sulfide as a source of sulfur.


ensembl_gene_id: NSJP_2080
symbol: thiC
gene_biotype: protein_coding
description:
  Thiamin (pyrimidine moiety) biosynthesis protein; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.


ensembl_gene_id: NSJP_2081
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthase A; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: NSJP_2083
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: NSJP_2084
symbol: lspA
gene_biotype: protein_coding
description:
  Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: NSJP_2086
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: NSJP_2088
symbol: macA
gene_biotype: protein_coding
description:
  Putative Efflux transporter, RND family, MFP subunit, Macrolide-specific efflux protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: NSJP_2091
symbol: macB
gene_biotype: protein_coding
description:
  Putative Crossover junction endodeoxyribonuclease RusA (Modular protein); Function of homologous gene experimentally demonstrated in an other organism; transporter;fragment of macrolide transport protein (ABC superfamily, atp_bind (N-terminal), membrane (C-terminal)) (part 2).


ensembl_gene_id: NSJP_2094
symbol: NSJP_2094
gene_biotype: protein_coding
description:
  Putative Regulatory protein, FmdB family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2101
symbol: NSJP_2101
gene_biotype: protein_coding
description:
  Putative ABC transporter, permease component; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2102
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: NSJP_2104
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosomal silencing factor RsfS; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: NSJP_2105
symbol: nadD
gene_biotype: protein_coding
description:
  Putative nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: NSJP_2106
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: NSJP_2107
symbol: obg
gene_biotype: protein_coding
description:
  GTPase Obg; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: NSJP_2108
symbol: rpmA
gene_biotype: protein_coding
description:
  50S ribosomal protein L27; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the bacterial ribosomal protein bL27 family.


ensembl_gene_id: NSJP_2109
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal subunit protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: NSJP_2111
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched-chain-amino-acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: NSJP_2112
symbol: secG
gene_biotype: protein_coding
description:
  Protein-export membrane protein SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: NSJP_2113
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: NSJP_2114
symbol: pgk
gene_biotype: protein_coding
description:
  Phosphoglycerate kinase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the phosphoglycerate kinase family.


ensembl_gene_id: NSJP_2115
symbol: gapA
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase A; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: NSJP_2117
symbol: mutS-2
gene_biotype: protein_coding
description:
  Endonuclease MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: NSJP_2119
symbol: queG
gene_biotype: protein_coding
description:
  Epoxyqueuosine reductase; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family.


ensembl_gene_id: NSJP_2123
symbol: thiI
gene_biotype: protein_coding
description:
  Putative tRNA sulfurtransferase; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.


ensembl_gene_id: NSJP_2124
symbol: trxB
gene_biotype: protein_coding
description:
  Thioredoxin reductase, FAD/NAD(P)-binding; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: NSJP_2125
symbol: coaE
gene_biotype: protein_coding
description:
  Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: NSJP_2132
symbol: NSJP_2132
gene_biotype: protein_coding
description:
  Putative Muconate cycloisomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2141
symbol: NSJP_2141
gene_biotype: protein_coding
description:
  Homologs of previously reported genes of unknown function; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: NSJP_2145
symbol: NSJP_2145
gene_biotype: protein_coding
description:
  Putative Imidazolonepropionase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2150
symbol: NSJP_2150
gene_biotype: protein_coding
description:
  Putative NAD-dependent epimerase/dehydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2152
symbol: NSJP_2152
gene_biotype: protein_coding
description:
  Putative ATP-dependent DNA helicase Lhr; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2154
symbol: NSJP_2154
gene_biotype: protein_coding
description:
  Conserved membrane protein of unknown function; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: NSJP_2156
symbol: katA
gene_biotype: protein_coding
description:
  Catalase (hydroperoxidase II); Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the catalase family.


ensembl_gene_id: NSJP_2161
symbol: NSJP_2161
gene_biotype: protein_coding
description:
  Putative RNA polymerase sigma factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: NSJP_2162
symbol: NSJP_2162
gene_biotype: protein_coding
description:
  Putative Amidohydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2164
symbol: NSJP_2164
gene_biotype: protein_coding
description:
  Putative DNA mismatch repair protein, MutS family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the DNA mismatch repair MutS family.


ensembl_gene_id: NSJP_2165
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: NSJP_2178
symbol: NSJP_2178
gene_biotype: protein_coding
description:
  Putative Thiaminase; Catalyzes an amino-pyrimidine hydrolysis reaction at the C5' of the pyrimidine moiety of thiamine compounds, a reaction that is part of a thiamine salvage pathway; Belongs to the TenA family.


ensembl_gene_id: NSJP_2179
symbol: sthA
gene_biotype: protein_coding
description:
  Putative soluble pyridine nucleotide transhydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2180
symbol: NSJP_2180
gene_biotype: protein_coding
description:
  Putative Thiol peroxidase (Modular protein); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.


ensembl_gene_id: NSJP_2181
symbol: NSJP_2181
gene_biotype: protein_coding
description:
  Putative 2-hydroxy-6-ketonona-2,4-dienedioate hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2183
symbol: cfiB
gene_biotype: protein_coding
description:
  2-oxoglutarate carboxylase small subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: NSJP_2185
symbol: NSJP_2185
gene_biotype: protein_coding
description:
  Putative Phosphate-binding protein PstS; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2189
symbol: NSJP_2189
gene_biotype: protein_coding
description:
  Putative Transporter, eamA family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2192
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: NSJP_2193
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: NSJP_2194
symbol: hemY
gene_biotype: protein_coding
description:
  Protoporphyrinogen oxidase; Catalyzes the 6-electron oxidation of protoporphyrinogen-IX to form protoporphyrin-IX.


ensembl_gene_id: NSJP_2201
symbol: purM-2
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: NSJP_2202
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase 1; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: NSJP_2205
symbol: NSJP_2205
gene_biotype: protein_coding
description:
  Putative sugar dehydratase/epimerase YfnG (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2209
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase 2; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: NSJP_2218
symbol: NSJP_2218
gene_biotype: protein_coding
description:
  Putative Peptidoglycan O-acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the membrane-bound acyltransferase family.


ensembl_gene_id: NSJP_2229
symbol: glgE
gene_biotype: protein_coding
description:
  Alpha-1,4-glucan:maltose-1-phosphate maltosyltransferase; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.


ensembl_gene_id: NSJP_2231
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: NSJP_2238
symbol: NSJP_2238
gene_biotype: protein_coding
description:
  Putative Transmembrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2259
symbol: NSJP_2259
gene_biotype: protein_coding
description:
  Putative Transporter of MFS family, contains Lipocalin domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2275
symbol: sigA
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor SigA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: NSJP_2276
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: NSJP_2278
symbol: queC
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: NSJP_2303
symbol: NSJP_2303
gene_biotype: protein_coding
description:
  Putative Transcriptional regulator, AsnC family (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2314
symbol: rlpA
gene_biotype: protein_coding
description:
  Conserved protein of unknown function; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: NSJP_2324
symbol: tufB
gene_biotype: protein_coding
description:
  Protein chain elongation factor EF-Tu, possible GTP-binding factor (duplicate of tufA); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: NSJP_2326
symbol: secE
gene_biotype: protein_coding
description:
  Protein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.


ensembl_gene_id: NSJP_2327
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription termination factor; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: NSJP_2328
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: NSJP_2329
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal subunit protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: NSJP_2330
symbol: rplJL
gene_biotype: protein_coding
description:
  Fused 50S ribosomal proteins L10 and L7/L12 (Modular protein); Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: NSJP_2331
symbol: rpoB
gene_biotype: protein_coding
description:
  RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: NSJP_2332
symbol: rpoC
gene_biotype: protein_coding
description:
  RNA polymerase, beta prime subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: NSJP_2333
symbol: rpsL
gene_biotype: protein_coding
description:
  30S ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: NSJP_2334
symbol: rpsG
gene_biotype: protein_coding
description:
  30S ribosomal subunit protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: NSJP_2335
symbol: fusA
gene_biotype: protein_coding
description:
  Protein chain elongation factor EF-G, GTP-binding; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase f [...]


ensembl_gene_id: NSJP_2336
symbol: tufB-2
gene_biotype: protein_coding
description:
  Protein chain elongation factor EF-Tu, possible GTP-binding factor (duplicate of tufA); Function of homologous gene experimentally demonstrated in an other organism; factor.


ensembl_gene_id: NSJP_2337
symbol: rpsJ
gene_biotype: protein_coding
description:
  30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: NSJP_2338
symbol: rplC
gene_biotype: protein_coding
description:
  50S ribosomal subunit protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: NSJP_2340
symbol: rplW
gene_biotype: protein_coding
description:
  50S ribosomal subunit protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: NSJP_2341
symbol: rplB
gene_biotype: protein_coding
description:
  50S ribosomal subunit protein L2; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: NSJP_2342
symbol: rpsS
gene_biotype: protein_coding
description:
  30S ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: NSJP_2343
symbol: rplV
gene_biotype: protein_coding
description:
  50S ribosomal subunit protein L22; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: NSJP_2344
symbol: rpsC
gene_biotype: protein_coding
description:
  30S ribosomal subunit protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: NSJP_2345
symbol: rplP
gene_biotype: protein_coding
description:
  50S ribosomal subunit protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: NSJP_2346
symbol: rpmC
gene_biotype: protein_coding
description:
  50S ribosomal subunit protein L29; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the universal ribosomal protein uL29 family.


ensembl_gene_id: NSJP_2347
symbol: rpsQ
gene_biotype: protein_coding
description:
  30S ribosomal subunit protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: NSJP_2348
symbol: rplN
gene_biotype: protein_coding
description:
  50S ribosomal protein L14; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: NSJP_2349
symbol: rplX
gene_biotype: protein_coding
description:
  50S ribosomal subunit protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: NSJP_2350
symbol: rplE
gene_biotype: protein_coding
description:
  50S ribosomal subunit protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: NSJP_2351
symbol: rpsZ
gene_biotype: protein_coding
description:
  30S ribosomal protein S14 type Z; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: NSJP_2352
symbol: rpsH
gene_biotype: protein_coding
description:
  30S ribosomal subunit protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: NSJP_2353
symbol: rplF
gene_biotype: protein_coding
description:
  50S ribosomal subunit protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: NSJP_2354
symbol: rplR
gene_biotype: protein_coding
description:
  50S ribosomal subunit protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: NSJP_2355
symbol: rpsE
gene_biotype: protein_coding
description:
  30S ribosomal subunit protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: NSJP_2356
symbol: rpmD
gene_biotype: protein_coding
description:
  50S ribosomal subunit protein L30; Function of homologous gene experimentally demonstrated in an other organism; structure.


ensembl_gene_id: NSJP_2357
symbol: rplO
gene_biotype: protein_coding
description:
  50S ribosomal subunit protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: NSJP_2358
symbol: secY
gene_biotype: protein_coding
description:
  Preprotein translocase membrane subunit; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: NSJP_2359
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: NSJP_2360
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: NSJP_2361
symbol: infA
gene_biotype: protein_coding
description:
  Protein chain initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: NSJP_2362
symbol: rpsM
gene_biotype: protein_coding
description:
  30S ribosomal subunit protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: NSJP_2363
symbol: rpsK
gene_biotype: protein_coding
description:
  30S ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: NSJP_2364
symbol: rpsD
gene_biotype: protein_coding
description:
  30S ribosomal subunit protein S4; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: NSJP_2365
symbol: rpoA
gene_biotype: protein_coding
description:
  RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: NSJP_2366
symbol: rplQ
gene_biotype: protein_coding
description:
  50S ribosomal subunit protein L17; Function of homologous gene experimentally demonstrated in an other organism; structure.


ensembl_gene_id: NSJP_2369
symbol: lptB
gene_biotype: protein_coding
description:
  Putative lipopolysaccharide transport protein B: ATP-binding component of ABC superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.


ensembl_gene_id: NSJP_2371
symbol: NSJP_2371
gene_biotype: protein_coding
description:
  Putative Ribosomal protein S30Ae-family protein, sigma-54 modulation protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2374
symbol: NSJP_2374
gene_biotype: protein_coding
description:
  Putative Type IV pilus biogenesis protein PilN; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2375
symbol: NSJP_2375
gene_biotype: protein_coding
description:
  Putative Type IV pilus biogenesis protein PilO; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2376
symbol: NSJP_2376
gene_biotype: protein_coding
description:
  Putative Type IV pilus assembly protein PilP; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2377
symbol: NSJP_2377
gene_biotype: protein_coding
description:
  Putative Type IV pili biogenesis protein PilQ; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2378
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: NSJP_2383
symbol: NSJP_2383
gene_biotype: protein_coding
description:
  Putative branched-chain amino acid transport protein (ABC superfamily, peri_bind); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative transporter.


ensembl_gene_id: NSJP_2384
symbol: NSJP_2384
gene_biotype: protein_coding
description:
  Urea ABC transporter permease (fragment); Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: NSJP_2385
symbol: NSJP_2385
gene_biotype: protein_coding
description:
  Homologs of previously reported genes of unknown function; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: NSJP_2387
symbol: livF
gene_biotype: protein_coding
description:
  Leucine/isoleucine/valine transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.


ensembl_gene_id: NSJP_2390
symbol: ureD
gene_biotype: protein_coding
description:
  Urease accessory protein UreD 2; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter. Belongs to the UreD family.


ensembl_gene_id: NSJP_2391
symbol: ureG
gene_biotype: protein_coding
description:
  Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.


ensembl_gene_id: NSJP_2392
symbol: ureF
gene_biotype: protein_coding
description:
  Urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: NSJP_2393
symbol: ureE
gene_biotype: protein_coding
description:
  Urease accessory protein UreE; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.


ensembl_gene_id: NSJP_2398
symbol: nadE
gene_biotype: protein_coding
description:
  Putative glutamine-dependent NAD(+) synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: NSJP_2400
symbol: glnK
gene_biotype: protein_coding
description:
  Nitrogen regulatory protein P-II 2; Function of homologous gene experimentally demonstrated in an other organism; regulator; Belongs to the P(II) protein family.


ensembl_gene_id: NSJP_2401
symbol: glnD
gene_biotype: protein_coding
description:
  Bifunctional uridylyltransferase/uridylyl-removing enzyme; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.


ensembl_gene_id: NSJP_2402
symbol: glnA
gene_biotype: protein_coding
description:
  Glutamine synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: NSJP_2406
symbol: cynS
gene_biotype: protein_coding
description:
  Cyanate hydratase; Catalyzes the reaction of cyanate with bicarbonate to produce ammonia and carbon dioxide; Belongs to the cyanase family.


ensembl_gene_id: NSJP_2407
symbol: amtB
gene_biotype: protein_coding
description:
  Ammonium transporter; Function of homologous gene experimentally demonstrated in an other organism; transporter.


ensembl_gene_id: NSJP_2410
symbol: NSJP_2410
gene_biotype: protein_coding
description:
  Putative Cytochrome b6-f complex iron-sulfur subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2411
symbol: NSJP_2411
gene_biotype: protein_coding
description:
  Putative Cytochrome b/b6 domain-containing protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2415
symbol: rnhA
gene_biotype: protein_coding
description:
  Ribonuclease HI, degrades RNA of DNA-RNA hybrids; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids.


ensembl_gene_id: NSJP_2421
symbol: NSJP_2421
gene_biotype: protein_coding
description:
  Putative DegP2 peptidase. Serine peptidase. MEROPS family S01B; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2424
symbol: NSJP_2424
gene_biotype: protein_coding
description:
  Putative RNA polymerase sigma factor FecI (Sigma-19); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: NSJP_2425
symbol: NSJP_2425
gene_biotype: protein_coding
description:
  Putative Iron dicitrate transmembrane sensor FecR; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2426
symbol: NSJP_2426
gene_biotype: protein_coding
description:
  Putative Ferric iron uptake protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2430
symbol: NSJP_2430
gene_biotype: protein_coding
description:
  Putative (Glutamate-ammonia-ligase) adenylyltransferase, subunit A (Modular protein); Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulator [...]


ensembl_gene_id: NSJP_2431
symbol: glnEb
gene_biotype: protein_coding
description:
  (Glutamate-ammonia-ligase) adenylyltransferase, subunit B; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of GlnE binds the  [...]


ensembl_gene_id: NSJP_2435
symbol: groEL
gene_biotype: protein_coding
description:
  Chaperone Hsp60, peptide-dependent ATPase, heat shock protein; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: NSJP_2436
symbol: groS
gene_biotype: protein_coding
description:
  Cpn10 chaperonin GroES, small subunit of GroESL; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: NSJP_2439
symbol: ribBA
gene_biotype: protein_coding
description:
  Riboflavin biosynthesis protein RibBA [Includes: 3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: NSJP_2440
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: NSJP_2441
symbol: nusB
gene_biotype: protein_coding
description:
  N utilization substance protein B homolog; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: NSJP_2447
symbol: purS
gene_biotype: protein_coding
description:
  Conserved protein of unknown function; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the t [...]


ensembl_gene_id: NSJP_2448
symbol: purQ
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase 1; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]


ensembl_gene_id: NSJP_2449
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase 2; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to assist i [...]


ensembl_gene_id: NSJP_2450
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: NSJP_2457
symbol: NSJP_2457
gene_biotype: protein_coding
description:
  Putative Fatty acid hydroxylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2459
symbol: NSJP_2459
gene_biotype: protein_coding
description:
  Putative Thiol:disulfide interchange protein DsbE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2468
symbol: NSJP_2468
gene_biotype: protein_coding
description:
  Putative TPR repeat protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2469
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: NSJP_2473
symbol: NSJP_2473
gene_biotype: protein_coding
description:
  Putative Blue (Type 1) copper protein, cupredoxin family (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2481
symbol: scpA
gene_biotype: protein_coding
description:
  Segregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: NSJP_2482
symbol: scpB
gene_biotype: protein_coding
description:
  Putative chromosome segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: NSJP_2483
symbol: NSJP_2483
gene_biotype: protein_coding
description:
  Putative NHL repeat protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2484
symbol: guaB
gene_biotype: protein_coding
description:
  IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: NSJP_2486
symbol: rluB
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase B; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: NSJP_2487
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: NSJP_2488
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: NSJP_2490
symbol: NSJP_2490
gene_biotype: protein_coding
description:
  Putative Serine protease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2494
symbol: rluE
gene_biotype: protein_coding
description:
  Ribosomal large subunit pseudouridine synthase E; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: NSJP_2495
symbol: NSJP_2495
gene_biotype: protein_coding
description:
  Putative Alpha/beta hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2497
symbol: NSJP_2497
gene_biotype: protein_coding
description:
  Putative Ion transport 2 domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2499
symbol: NSJP_2499
gene_biotype: protein_coding
description:
  Putative Membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2500
symbol: NSJP_2500
gene_biotype: protein_coding
description:
  Putative Peptidase C14 caspase catalytic subunit p20; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2511
symbol: NSJP_2511
gene_biotype: protein_coding
description:
  Putative Quinol-cytochrome c reductase, iron-sulfur subunit (Rieske iron-sulfur protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2538
symbol: NSJP_2538
gene_biotype: protein_coding
description:
  Putative dimethylaniline monooxygenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2549
symbol: NSJP_2549
gene_biotype: protein_coding
description:
  Putative Redoxin domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2562
symbol: aglA
gene_biotype: protein_coding
description:
  Putative alpha-glucosidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2564
symbol: NSJP_2564
gene_biotype: protein_coding
description:
  Putative Cupin 2 domain-containing protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2568
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate 1-dehydrogenase 1; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: NSJP_2572
symbol: NSJP_2572
gene_biotype: protein_coding
description:
  Putative Dioxygenase, ferredoxin subunit, and Flavodoxin (Modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2584
symbol: NSJP_2584
gene_biotype: protein_coding
description:
  Putative flavin-containing monoamine oxidase AofH; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2591
symbol: atoB-2
gene_biotype: protein_coding
description:
  acetyl-CoA acetyltransferase; Function of homologous gene experimentally demonstrated in an other organism; carrier; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: NSJP_2594
symbol: NSJP_2594
gene_biotype: protein_coding
description:
  Putative Fatty acid oxidation complex subunit alpha; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: NSJP_2596
symbol: NSJP_2596
gene_biotype: protein_coding
description:
  Putative dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2605
symbol: NSJP_2605
gene_biotype: protein_coding
description:
  Putative 3-demethylubiquinone-9 3-O-methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2613
symbol: NSJP_2613
gene_biotype: protein_coding
description:
  Putative secreted protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2619
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]


ensembl_gene_id: NSJP_2621
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: NSJP_2623
symbol: ispU
gene_biotype: protein_coding
description:
  Undecaprenyl pyrophosphate synthase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: NSJP_2624
symbol: tldD
gene_biotype: protein_coding
description:
  Putative peptidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: NSJP_2630
symbol: NSJP_2630
gene_biotype: protein_coding
description:
  Putative Pytoene desaturase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2633
symbol: NSJP_2633
gene_biotype: protein_coding
description:
  Putative Beta-phosphoglucomutase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2635
symbol: nrdZ
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase NrdZ; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: NSJP_2641
symbol: NSJP_2641
gene_biotype: protein_coding
description:
  Putative serine/threonine protein kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2643
symbol: NSJP_2643
gene_biotype: protein_coding
description:
  Putative Dihydroneopterin aldolase and SAM-dependent methyltransferase (Modular protein); Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: NSJP_2644
symbol: moaC
gene_biotype: protein_coding
description:
  Molybdopterin biosynthesis, protein C; Function of homologous gene experimentally demonstrated in an other organism; putative enzyme.


ensembl_gene_id: NSJP_2646
symbol: moaA
gene_biotype: protein_coding
description:
  Cyclic pyranopterin monophosphate synthase 1; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: NSJP_2647
symbol: NSJP_2647
gene_biotype: protein_coding
description:
  Putative Nickel/cobalt efflux system RcnA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the NiCoT transporter (TC 2.A.52) family.


ensembl_gene_id: NSJP_2649
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, beta (carboxyltranferase) subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: NSJP_2650
symbol: folC
gene_biotype: protein_coding
description:
  Bifunctional protein FolC: Folylpolyglutamate synthase and Dihydrofolate synthase; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: NSJP_2653
symbol: trxA
gene_biotype: protein_coding
description:
  Thioredoxin 1; Function of homologous gene experimentally demonstrated in an other organism; carrier; Belongs to the thioredoxin family.


ensembl_gene_id: NSJP_2655
symbol: NSJP_2655
gene_biotype: protein_coding
description:
  Putative Response regulator with HD domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2657
symbol: NSJP_2657
gene_biotype: protein_coding
description:
  Putative Histidine kinase, contains GAF domain (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2668
symbol: bcp
gene_biotype: protein_coding
description:
  Putative peroxiredoxin bcp; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2673
symbol: NSJP_2673
gene_biotype: protein_coding
description:
  Putative Carboxymethylenebutenolidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2674
symbol: NSJP_2674
gene_biotype: protein_coding
description:
  Putative Oxidoreductase, GFO/IDH/MOCA family (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2675
symbol: NSJP_2675
gene_biotype: protein_coding
description:
  Putative Regulator protein, AsnC family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2680
symbol: clpB
gene_biotype: protein_coding
description:
  Protein disaggregation chaperone; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: NSJP_2685
symbol: yfhA
gene_biotype: protein_coding
description:
  Putative DNA-binding response regulator in two-component system; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.


ensembl_gene_id: NSJP_2689
symbol: NSJP_2689
gene_biotype: protein_coding
description:
  Putative membrane protein (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2702
symbol: NSJP_2702
gene_biotype: protein_coding
description:
  Putative Sulfotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2704
symbol: NSJP_2704
gene_biotype: protein_coding
description:
  Putative iron acquisition-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2707
symbol: NSJP_2707
gene_biotype: protein_coding
description:
  Putative TonB-dependent siderophore receptor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2708
symbol: NSJP_2708
gene_biotype: protein_coding
description:
  Putative Anti-FecI sigma factor, FecR; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2713
symbol: NSJP_2713
gene_biotype: protein_coding
description:
  Homologs of previously reported genes of unknown function; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: NSJP_2716
symbol: phoU
gene_biotype: protein_coding
description:
  Phosphate-specific transport system accessory protein PhoU homolog; Plays a role in the regulation of phosphate uptake.


ensembl_gene_id: NSJP_2717
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate transporter subunit; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: NSJP_2719
symbol: NSJP_2719
gene_biotype: protein_coding
description:
  Phosphate ABC transporter permease protein; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: NSJP_2722
symbol: NSJP_2722
gene_biotype: protein_coding
description:
  Putative Outer membrane lipoprotein, Slp family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2725
symbol: NSJP_2725
gene_biotype: protein_coding
description:
  Putative Phosphate ABC transporter, periplasmic phosphate-binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2726
symbol: NSJP_2726
gene_biotype: protein_coding
description:
  Putative general secretion pathway protein K; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2731
symbol: NSJP_2731
gene_biotype: protein_coding
description:
  Putative Type II secretion system protein I; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2738
symbol: NSJP_2738
gene_biotype: protein_coding
description:
  Putative FAD/FMN-containing dehydrogenase, glycolate oxidase, fused subunits GlcD and GlcF; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2747
symbol: NSJP_2747
gene_biotype: protein_coding
description:
  Putative Permease of the major facilitator superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2752
symbol: NSJP_2752
gene_biotype: protein_coding
description:
  Putative Peptidyl-prolyl cis-trans isomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2755
symbol: NSJP_2755
gene_biotype: protein_coding
description:
  Putative membrane-associated protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2782
symbol: zwf-2
gene_biotype: protein_coding
description:
  Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: NSJP_2787
symbol: NSJP_2787
gene_biotype: protein_coding
description:
  Putative NADPH-dependent oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2789
symbol: fabG-4
gene_biotype: protein_coding
description:
  3-oxoacyl-(Acyl-carrier-protein) reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: NSJP_2803
symbol: NSJP_2803
gene_biotype: protein_coding
description:
  Putative Beta-lactamase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: NSJP_2814
symbol: NSJP_2814
gene_biotype: protein_coding
description:
  Putative cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.


ensembl_gene_id: NSJP_2816
symbol: cysK
gene_biotype: protein_coding
description:
  Cysteine synthase A, O-acetylserine sulfhydrolase A subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: NSJP_2820
symbol: cysA
gene_biotype: protein_coding
description:
  Sulfate/thiosulfate transporter subunit; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.


ensembl_gene_id: NSJP_2821
symbol: cysW
gene_biotype: protein_coding
description:
  Sulfate transport protein (ABC superfamily, membrane); Function of homologous gene experimentally demonstrated in an other organism; transporter.


ensembl_gene_id: NSJP_2822
symbol: cysT
gene_biotype: protein_coding
description:
  Sulfate transport protein (ABC superfamily, membrane); Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import.


ensembl_gene_id: NSJP_2823
symbol: sbp
gene_biotype: protein_coding
description:
  Sulfate transporter subunit; Function of homologous gene experimentally demonstrated in an other organism; transporter.


ensembl_gene_id: NSJP_2824
symbol: sbp-2
gene_biotype: protein_coding
description:
  Sulfate transport protein (ABC superfamily, peri_bind); Function of homologous gene experimentally demonstrated in an other organism; transporter.


ensembl_gene_id: NSJP_2830
symbol: NSJP_2830
gene_biotype: protein_coding
description:
  Putative Transcriptional regulator ModE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2831
symbol: NSJP_2831
gene_biotype: protein_coding
description:
  Putative Molybdate ABC transporter, periplasmic binding protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2833
symbol: NSJP_2833
gene_biotype: protein_coding
description:
  Putative Anion-selective porin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2837
symbol: modB
gene_biotype: protein_coding
description:
  Molybdenum transport system permease protein ModB; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: NSJP_2853
symbol: pgm
gene_biotype: protein_coding
description:
  Phosphoglucomutase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: NSJP_2854
symbol: pgi
gene_biotype: protein_coding
description:
  Glucosephosphate isomerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the GPI family.


ensembl_gene_id: NSJP_2864
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions.


ensembl_gene_id: NSJP_2865
symbol: NSJP_2865
gene_biotype: protein_coding
description:
  Putative phosphoketolase 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2867
symbol: glgP-2
gene_biotype: protein_coding
description:
  Glycogen phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: NSJP_2872
symbol: NSJP_2872
gene_biotype: protein_coding
description:
  Putative MscS Mechanosensitive ion channel; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2873
symbol: NSJP_2873
gene_biotype: protein_coding
description:
  Putative Patatin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2878
symbol: NSJP_2878
gene_biotype: protein_coding
description:
  Putative lipoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2898
symbol: NSJP_2898
gene_biotype: protein_coding
description:
  Putative Tetratricopeptide repeat protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2899
symbol: NSJP_2899
gene_biotype: protein_coding
description:
  Putative exported protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2927
symbol: NSJP_2927
gene_biotype: protein_coding
description:
  Putative Surface antigen (D15); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2940
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: NSJP_2941
symbol: tmk-2
gene_biotype: protein_coding
description:
  Putative thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: NSJP_2942
symbol: NSJP_2942
gene_biotype: protein_coding
description:
  Putative Exopolyphosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2943
symbol: NSJP_2943
gene_biotype: protein_coding
description:
  Oxidoreductase, Glucose/ribitol dehydrogenase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: NSJP_2953
symbol: NSJP_2953
gene_biotype: protein_coding
description:
  Putative 2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.


ensembl_gene_id: NSJP_2956
symbol: recA
gene_biotype: protein_coding
description:
  DNA strand exchange and recombination protein with protease and nuclease activity; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: NSJP_2958
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: NSJP_2959
symbol: yqgF
gene_biotype: protein_coding
description:
  Predicted Holliday junction resolvase (Modular protein); Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: NSJP_2960
symbol: mltG
gene_biotype: protein_coding
description:
  Conserved protein of unknown function; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: NSJP_2961
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: NSJP_2966
symbol: NSJP_2966
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: NSJP_2967
symbol: dnaJ-2
gene_biotype: protein_coding
description:
  Chaperone Hsp40, co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interaction [...]


ensembl_gene_id: NSJP_2968
symbol: dnaK-2
gene_biotype: protein_coding
description:
  Chaperone Hsp70 in DNA biosynthesis/cell division; Acts as a chaperone; Belongs to the heat shock protein 70 family.


ensembl_gene_id: NSJP_2969
symbol: grpE
gene_biotype: protein_coding
description:
  Protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent i [...]


ensembl_gene_id: NSJP_2970
symbol: coaX
gene_biotype: protein_coding
description:
  Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: NSJP_2971
symbol: NSJP_2971
gene_biotype: protein_coding
description:
  Putative Biotin-(Acetyl-CoA-carboxylase) ligase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2972
symbol: nadC
gene_biotype: protein_coding
description:
  Putative nicotinate-nucleotide pyrophosphorylase [carboxylating]; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the NadC/ModD family.


ensembl_gene_id: NSJP_2973
symbol: valS
gene_biotype: protein_coding
description:
  Valine--tRNA ligase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: NSJP_2974
symbol: NSJP_2974
gene_biotype: protein_coding
description:
  Putative Response regulator, CheY like (Modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2978
symbol: NSJP_2978
gene_biotype: protein_coding
description:
  Putative Multidrug resistance protein NorM; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2981
symbol: NSJP_2981
gene_biotype: protein_coding
description:
  Membrane bound O-acyl transferase MBOAT family protein; Belongs to the membrane-bound acyltransferase family.


ensembl_gene_id: NSJP_2984
symbol: NSJP_2984
gene_biotype: protein_coding
description:
  Putative Multi-domain non-ribosomal peptide synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_2986
symbol: NSJP_2986
gene_biotype: protein_coding
description:
  Putative 4'-phosphopantetheinyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the P-Pant transferase superfamily.


ensembl_gene_id: NSJP_2987
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA-specific adenosine deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: NSJP_2989
symbol: NSJP_2989
gene_biotype: protein_coding
description:
  Putative RNA polymerase sigma factor, sigma-24 homolog; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: NSJP_2994
symbol: NSJP_2994
gene_biotype: protein_coding
description:
  Putative [lipopolysaccharide]-lipid A 3-O-deacylase outer membrane protein, PagL family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3017
symbol: NSJP_3017
gene_biotype: protein_coding
description:
  Putative Chymotrypsin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: NSJP_3027
symbol: NSJP_3027
gene_biotype: protein_coding
description:
  Putative Oxidoreductase, DsbA-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3038
symbol: lnt-2
gene_biotype: protein_coding
description:
  Putative Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: NSJP_3046
symbol: NSJP_3046
gene_biotype: protein_coding
description:
  Putative Histone acetyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: NSJP_3049
symbol: NSJP_3049
gene_biotype: protein_coding
description:
  Putative large multi-functional protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3059
symbol: NSJP_3059
gene_biotype: protein_coding
description:
  Putative Phage integrase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the 'phage' integrase family.


ensembl_gene_id: NSJP_3080
symbol: NSJP_3080
gene_biotype: protein_coding
description:
  Putative Polysaccharide export protein (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3084
symbol: NSJP_3084
gene_biotype: protein_coding
description:
  Putative Helicase (N-terminal); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3085
symbol: NSJP_3085
gene_biotype: protein_coding
description:
  Putative Helicase (C-terminal); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3088
symbol: NSJP_3088
gene_biotype: protein_coding
description:
  Putative Outer membrane protein TolC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3089
symbol: NSJP_3089
gene_biotype: protein_coding
description:
  Putative Acriflavine resistance protein A; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: NSJP_3090
symbol: NSJP_3090
gene_biotype: protein_coding
description:
  Putative Heavy metal efflux pump, CzcA family, Acriflavine resistance protein B; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: NSJP_3092
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: NSJP_3098
symbol: moeB
gene_biotype: protein_coding
description:
  Molybdopterin synthase sulfurylase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: NSJP_3108
symbol: NSJP_3108
gene_biotype: protein_coding
description:
  Putative 2-octaprenyl-3-methyl-6-methoxy-1, 4-benzoquinol hydroxylase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3117
symbol: NSJP_3117
gene_biotype: protein_coding
description:
  Ca(2+)/H(+) antiporter; Ca(+)/H(+) antiporter that extrudes calcium in exchange for external protons.


ensembl_gene_id: NSJP_3119
symbol: NSJP_3119
gene_biotype: protein_coding
description:
  Putative Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: NSJP_3133
symbol: metH
gene_biotype: protein_coding
description:
  homocysteine-N5-methyltetrahydrofolate transmethylase, B12-dependent; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.


ensembl_gene_id: NSJP_3138
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: NSJP_3139
symbol: NSJP_3139
gene_biotype: protein_coding
description:
  Non-canonical purine NTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: NSJP_3168
symbol: NSJP_3168
gene_biotype: protein_coding
description:
  Putative Peroxiredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3176
symbol: NSJP_3176
gene_biotype: protein_coding
description:
  Putative Nudix hydrolase, MutT family (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3187
symbol: miaB
gene_biotype: protein_coding
description:
  (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: NSJP_3188
symbol: NSJP_3188
gene_biotype: protein_coding
description:
  Putative tRNA modifying enzyme, MiaB-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3190
symbol: ampG
gene_biotype: protein_coding
description:
  Muropeptide transporter; Function of homologous gene experimentally demonstrated in an other organism; transporter.


ensembl_gene_id: NSJP_3192
symbol: nrdJ
gene_biotype: protein_coding
description:
  Vitamin B12-dependent ribonucleotide reductase; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: NSJP_3196
symbol: rlpA-2
gene_biotype: protein_coding
description:
  Putative lipoprotein, RlpA-like; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: NSJP_3198
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA.


ensembl_gene_id: NSJP_3200
symbol: trpE-2
gene_biotype: protein_coding
description:
  Anthranilate synthase component 1; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]


ensembl_gene_id: NSJP_3201
symbol: pabA
gene_biotype: protein_coding
description:
  Aminodeoxychorismate synthase, subunit II; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: NSJP_3202
symbol: trpD-2
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: NSJP_3204
symbol: trpC
gene_biotype: protein_coding
description:
  Uncharacterized protein; Function of homologous gene experimentally demonstrated in an other organism; enzyme;fragment of fused indole-3-glycerolphosphate synthetase; N-(5-phosphoribosyl)anthranilate isomerase (part 1).


ensembl_gene_id: NSJP_3206
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: NSJP_3207
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: NSJP_3210
symbol: lolD
gene_biotype: protein_coding
description:
  Outer membrane-specific lipoprotein transporter subunit; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.


ensembl_gene_id: NSJP_3212
symbol: lysS
gene_biotype: protein_coding
description:
  Lysine tRNA synthetase, constitutive; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: NSJP_3213
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: NSJP_3214
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: NSJP_3221
symbol: NSJP_3221
gene_biotype: protein_coding
description:
  Putative C4-dicarboxylate transport protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: NSJP_3227
symbol: pssA-2
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: NSJP_3230
symbol: lpd
gene_biotype: protein_coding
description:
  Lipoamide dehydrogenase, E3 component is part of three enzyme complexes; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: NSJP_3232
symbol: aceE
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase, decarboxylase component E1, thiamin-binding; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: NSJP_3259
symbol: NSJP_3259
gene_biotype: protein_coding
description:
  Putative PEGA domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3272
symbol: NSJP_3272
gene_biotype: protein_coding
description:
  Putative hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3283
symbol: NSJP_3283
gene_biotype: protein_coding
description:
  Putative sulfite oxidase cytochrome subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3285
symbol: bepE
gene_biotype: protein_coding
description:
  Efflux pump membrane transporter BepE; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: NSJP_3299
symbol: clpX-2
gene_biotype: protein_coding
description:
  ATPase and specificity subunit of ClpX-ClpP ATP-dependent serine protease; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: NSJP_3301
symbol: ysgA
gene_biotype: protein_coding
description:
  Putative hydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: NSJP_3319
symbol: NSJP_3319
gene_biotype: protein_coding
description:
  Putative fatty acid cis/trans isomerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3320
symbol: lig
gene_biotype: protein_coding
description:
  Putative DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair.


ensembl_gene_id: NSJP_3325
symbol: NSJP_3325
gene_biotype: protein_coding
description:
  Putative Endonuclease/exonuclease/phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3326
symbol: NSJP_3326
gene_biotype: protein_coding
description:
  Putative Peptidoglycan-associated lipoprotein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3351
symbol: top6B
gene_biotype: protein_coding
description:
  Type 2 DNA topoisomerase 6 subunit B; Relaxes both positive and negative superturns and exhibits a strong decatenase activity.


ensembl_gene_id: NSJP_3352
symbol: top6A
gene_biotype: protein_coding
description:
  Type 2 DNA topoisomerase 6 subunit A; Relaxes both positive and negative superturns and exhibits a strong decatenase activity; Belongs to the TOP6A family.


ensembl_gene_id: NSJP_3358
symbol: NSJP_3358
gene_biotype: protein_coding
description:
  Homologs of previously reported genes of unknown function; Belongs to the helicase family. UvrD subfamily.


ensembl_gene_id: NSJP_3361
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: NSJP_3366
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA homolog; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: NSJP_3368
symbol: NSJP_3368
gene_biotype: protein_coding
description:
  Putative Peptidase M22; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3377
symbol: purH
gene_biotype: protein_coding
description:
  Fused IMP cyclohydrolase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: NSJP_3378
symbol: purD
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide synthetase phosphoribosylamine-glycine ligase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the GARS family.


ensembl_gene_id: NSJP_3379
symbol: NSJP_3379
gene_biotype: protein_coding
description:
  Putative dsRNA-binding protein, predicted ribosome maturation factor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the SUA5 family.


ensembl_gene_id: NSJP_3380
symbol: NSJP_3380
gene_biotype: protein_coding
description:
  Putative Murein lipoprotein (Modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3383
symbol: coaD
gene_biotype: protein_coding
description:
  Pantetheine-phosphate adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: NSJP_3384
symbol: NSJP_3384
gene_biotype: protein_coding
description:
  Putative Ribosomal RNA small subunit methyltransferase D; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3390
symbol: NSJP_3390
gene_biotype: protein_coding
description:
  Putative Formate hydrogenlyase, small subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3391
symbol: NSJP_3391
gene_biotype: protein_coding
description:
  Putative Formate hydrogenlyase, large subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3393
symbol: NSJP_3393
gene_biotype: protein_coding
description:
  Putative Formate hydrogenlyase, membrane subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3401
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: NSJP_3406
symbol: mrp
gene_biotype: protein_coding
description:
  Putative Protein Mrp, ATPase; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: NSJP_3411
symbol: bioD
gene_biotype: protein_coding
description:
  ATP-dependent dethiobiotin synthetase BioD; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: NSJP_3412
symbol: thiE-2
gene_biotype: protein_coding
description:
  Thiamine-phosphate synthase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: NSJP_3413
symbol: accC
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: NSJP_3414
symbol: accB
gene_biotype: protein_coding
description:
  Acetyl CoA carboxylase, biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: NSJP_3415
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: NSJP_3416
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: NSJP_3418
symbol: dfp
gene_biotype: protein_coding
description:
  Fused 4'-phosphopantothenoylcysteine decarboxylase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: NSJP_3422
symbol: nth-2
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: NSJP_3423
symbol: hflX
gene_biotype: protein_coding
description:
  GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.


ensembl_gene_id: NSJP_3424
symbol: tsaD
gene_biotype: protein_coding
description:
  tRNA N6-adenosine threonylcarbamoyltransferase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: NSJP_3426
symbol: ppnK
gene_biotype: protein_coding
description:
  Putative inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: NSJP_3427
symbol: NSJP_3427
gene_biotype: protein_coding
description:
  Putative Ferredoxin-NADP(+) reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3428
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarate hydratase (fumarase C),aerobic Class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: NSJP_3437
symbol: rnd
gene_biotype: protein_coding
description:
  Ribonuclease D; Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides; Belongs to the RNase D family.


ensembl_gene_id: NSJP_3442
symbol: NSJP_3442
gene_biotype: protein_coding
description:
  Putative Exopolysaccharide biosynthesis related tyrosine-protein kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3443
symbol: NSJP_3443
gene_biotype: protein_coding
description:
  Putative Lipopolysaccharide biosynthesis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3445
symbol: NSJP_3445
gene_biotype: protein_coding
description:
  Putative polysaccharide export protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3447
symbol: NSJP_3447
gene_biotype: protein_coding
description:
  UDP-GlcNAc:undecaprenyl-phosphate/decaprenyl-phosphate GlcNAc-1-phosphate transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3450
symbol: NSJP_3450
gene_biotype: protein_coding
description:
  Homologs of previously reported genes of unknown function; Belongs to the glycosyltransferase 26 family.


ensembl_gene_id: NSJP_3458
symbol: fcl
gene_biotype: protein_coding
description:
  GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.


ensembl_gene_id: NSJP_3459
symbol: gmd
gene_biotype: protein_coding
description:
  GDP-D-mannose dehydratase, NAD(P)-binding; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.


ensembl_gene_id: NSJP_3461
symbol: rpoD-2
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 70 (sigma D) factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: NSJP_3462
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: NSJP_3465
symbol: hisI
gene_biotype: protein_coding
description:
  Histidine biosynthesis bifunctional protein HisIE [Includes: Phosphoribosyl-AMP cyclohydrolase; Phosphoribosyl-ATP pyrophosphatase]; In the N-terminal section; belongs to the PRA-CH family.


ensembl_gene_id: NSJP_3466
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase, catalytic subunit with HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: NSJP_3467
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.


ensembl_gene_id: NSJP_3469
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase, glutamine amidotransferase subunit with HisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: NSJP_3471
symbol: NSJP_3471
gene_biotype: protein_coding
description:
  Putative Outer membrane protein, ompA family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3479
symbol: dnaE-2
gene_biotype: protein_coding
description:
  DNA polymerase III alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: NSJP_3480
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, carboxytransferase, alpha subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: NSJP_3497
symbol: NSJP_3497
gene_biotype: protein_coding
description:
  Putative 2,5-diketo-D-gluconic acid reductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3500
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: NSJP_3502
symbol: yibK
gene_biotype: protein_coding
description:
  Putative rRNA methylase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: NSJP_3503
symbol: NSJP_3503
gene_biotype: protein_coding
description:
  Putative Outer membrane channel; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3509
symbol: NSJP_3509
gene_biotype: protein_coding
description:
  Putative Membrane-fusion protein of multidrug efflux transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: NSJP_3511
symbol: cspC
gene_biotype: protein_coding
description:
  Stress protein, member of the CspA-family; Function of homologous gene experimentally demonstrated in an other organism; factor.


ensembl_gene_id: NSJP_3513
symbol: NSJP_3513
gene_biotype: protein_coding
description:
  Putative Permease, YjgP/YjgQ family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3515
symbol: fabF-2
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: NSJP_3516
symbol: acpP-2
gene_biotype: protein_coding
description:
  Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.


ensembl_gene_id: NSJP_3517
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-acylglucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: NSJP_3521
symbol: NSJP_3521
gene_biotype: protein_coding
description:
  Putative Response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3522
symbol: NSJP_3522
gene_biotype: protein_coding
description:
  Putative CheW-like signal transduction protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3524
symbol: NSJP_3524
gene_biotype: protein_coding
description:
  Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3525
symbol: NSJP_3525
gene_biotype: protein_coding
description:
  Putative Methyl-accepting chemotaxis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3526
symbol: NSJP_3526
gene_biotype: protein_coding
description:
  Putative Chemotaxis protein CheW (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3530
symbol: NSJP_3530
gene_biotype: protein_coding
description:
  Putative Adenosylcobinamide amidohydrolase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3532
symbol: cobD-2
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: NSJP_3533
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: NSJP_3534
symbol: cobT
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: NSJP_3537
symbol: cobQ
gene_biotype: protein_coding
description:
  Cobyric acid synthase; Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: NSJP_3538
symbol: cobB-2
gene_biotype: protein_coding
description:
  Cobyrinic acid A,C-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: NSJP_3543
symbol: metE
gene_biotype: protein_coding
description:
  5-methyltetrahydropteroyltriglutamate- homocysteine S-methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.


ensembl_gene_id: NSJP_3544
symbol: NSJP_3544
gene_biotype: protein_coding
description:
  Putative 2-octaprenyl-3-methyl-6-methoxy-1, 4-benzoquinol hydroxylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3545
symbol: NSJP_3545
gene_biotype: protein_coding
description:
  Putative methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. gTMT family.


ensembl_gene_id: NSJP_3548
symbol: yvqK
gene_biotype: protein_coding
description:
  Cob(I)yrinic acid a,c-diamide adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.


ensembl_gene_id: NSJP_3550
symbol: NSJP_3550
gene_biotype: protein_coding
description:
  Putative Vitamin B12 transporter BtuB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3554
symbol: NSJP_3554
gene_biotype: protein_coding
description:
  Putative Vitamin B12 import system, ATP-binding protein BtuD; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3555
symbol: btuC
gene_biotype: protein_coding
description:
  Vitamin B12 import system, permease protein BtuC; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: NSJP_3556
symbol: NSJP_3556
gene_biotype: protein_coding
description:
  Putative Vitamin B12 import system, periplasmic binding protein BtuF; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3560
symbol: tyrS
gene_biotype: protein_coding
description:
  Tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.


ensembl_gene_id: NSJP_3563
symbol: gcvH
gene_biotype: protein_coding
description:
  Glycine cleavage complex lipoylprotein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: NSJP_3564
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: NSJP_3565
symbol: mtnA
gene_biotype: protein_coding
description:
  Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: NSJP_3567
symbol: NSJP_3567
gene_biotype: protein_coding
description:
  Putative Competence protein ComEC/Rec2 related protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3568
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: NSJP_3569
symbol: folP
gene_biotype: protein_coding
description:
  7,8-dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: NSJP_3570
symbol: ftsH
gene_biotype: protein_coding
description:
  Protease, ATP-dependent zinc-metallo; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: NSJP_3571
symbol: hpt
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: NSJP_3572
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: NSJP_3574
symbol: hemB
gene_biotype: protein_coding
description:
  Porphobilinogen synthase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the ALAD family.


ensembl_gene_id: NSJP_3577
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: NSJP_3578
symbol: hemA
gene_biotype: protein_coding
description:
  Glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: NSJP_3579
symbol: NSJP_3579
gene_biotype: protein_coding
description:
  Putative Cytochrome c biogenesis protein CcsA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3583
symbol: NSJP_3583
gene_biotype: protein_coding
description:
  Putative Fe(2+)-trafficking protein YggX; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes.


ensembl_gene_id: NSJP_3586
symbol: rplM
gene_biotype: protein_coding
description:
  50S ribosomal subunit protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: NSJP_3587
symbol: rpsI
gene_biotype: protein_coding
description:
  30S ribosomal subunit protein S9; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the universal ribosomal protein uS9 family.


ensembl_gene_id: NSJP_3588
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: NSJP_3589
symbol: argJ
gene_biotype: protein_coding
description:
  Arginine biosynthesis bifunctional protein ArgJ [Includes: Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: NSJP_3590
symbol: rpsB
gene_biotype: protein_coding
description:
  30S ribosomal subunit protein S2; Function of homologous gene experimentally demonstrated in an other organism; structure; Belongs to the universal ribosomal protein uS2 family.


ensembl_gene_id: NSJP_3591
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: NSJP_3593
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: NSJP_3594
symbol: alr
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: NSJP_3598
symbol: NSJP_3598
gene_biotype: protein_coding
description:
  Putative Precorrin-2 dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3601
symbol: NSJP_3601
gene_biotype: protein_coding
description:
  Putative HNH endonuclease; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3602
symbol: NSJP_3602
gene_biotype: protein_coding
description:
  Putative Rieske-type ferredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3607
symbol: moaB
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein B; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.


ensembl_gene_id: NSJP_3610
symbol: NSJP_3610
gene_biotype: protein_coding
description:
  Putative Streptomycin 3''-kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3615
symbol: NSJP_3615
gene_biotype: protein_coding
description:
  Putative Serine/threonine protein kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3632
symbol: NSJP_3632
gene_biotype: protein_coding
description:
  Putative Adenylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: NSJP_3667
symbol: NSJP_3667
gene_biotype: protein_coding
description:
  Putative non-heme chloroperoxidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3669
symbol: NSJP_3669
gene_biotype: protein_coding
description:
  Adenine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism.


ensembl_gene_id: NSJP_3688
symbol: NSJP_3688
gene_biotype: protein_coding
description:
  Putative Acetyltransferase, GNAT family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3689
symbol: NSJP_3689
gene_biotype: protein_coding
description:
  NADPH:quinone reductase; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.


ensembl_gene_id: NSJP_3697
symbol: NSJP_3697
gene_biotype: protein_coding
description:
  Methylated-DNA--protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: NSJP_3699
symbol: yahK
gene_biotype: protein_coding
description:
  Putative oxidoreductase, Zn-dependent and NAD(P)-binding; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: NSJP_3700
symbol: NSJP_3700
gene_biotype: protein_coding
description:
  Catalase-related peroxidase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family.


ensembl_gene_id: NSJP_3714
symbol: NSJP_3714
gene_biotype: protein_coding
description:
  Conserved protein of unknown function; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: NSJP_3724
symbol: rnb
gene_biotype: protein_coding
description:
  Putative exoribonuclease II; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3726
symbol: NSJP_3726
gene_biotype: protein_coding
description:
  Putative Nucleotidyl transferase, Glucose-1-phosphate thymidylyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3729
symbol: proA
gene_biotype: protein_coding
description:
  Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: NSJP_3734
symbol: yqeC
gene_biotype: protein_coding
description:
  Putative 6-phosphogluconate dehydrogenase YqeC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3740
symbol: NSJP_3740
gene_biotype: protein_coding
description:
  Putative Periplasmic chaperone Skp; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3743
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: NSJP_3744
symbol: NSJP_3744
gene_biotype: protein_coding
description:
  Putative 3-oxoadipate enol-lactonase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: NSJP_3749
symbol: NSJP_3749
gene_biotype: protein_coding
description:
  Putative Phage integrase (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the 'phage' integrase family.


ensembl_gene_id: NSJP_3750
symbol: NSJP_3750
gene_biotype: protein_coding
description:
  Putative Excisionase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3764
symbol: NSJP_3764
gene_biotype: protein_coding
description:
  Polyketide biosynthesis protein BaeE [Includes: Malonyl CoA-acyl carrier protein transacylase] (fragment).


ensembl_gene_id: NSJP_3767
symbol: NSJP_3767
gene_biotype: protein_coding
description:
  Putative Phenylalanine racemase (ATP-hydrolyzing); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.


ensembl_gene_id: NSJP_3771
symbol: NSJP_3771
gene_biotype: protein_coding
description:
  Putative Linear gramicidin dehydrogenase LgrE; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3785
symbol: NSJP_3785
gene_biotype: protein_coding
description:
  Putative VanZ family protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3793
symbol: NSJP_3793
gene_biotype: protein_coding
description:
  Putative Methylase involved in ubiquinone/menaquinone biosynthesis; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3794
symbol: NSJP_3794
gene_biotype: protein_coding
description:
  Putative Succinoglycan biosynthesis protein ExoA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3796
symbol: NSJP_3796
gene_biotype: protein_coding
description:
  Putative Methylase involved in ubiquinone/menaquinonebiosynthesis-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3800
symbol: NSJP_3800
gene_biotype: protein_coding
description:
  Putative Glycosyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3801
symbol: NSJP_3801
gene_biotype: protein_coding
description:
  Putative Asparagine synthetase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3817
symbol: NSJP_3817
gene_biotype: protein_coding
description:
  Putative LmbE-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3824
symbol: NSJP_3824
gene_biotype: protein_coding
description:
  Putative Polysaccharide export protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3825
symbol: NSJP_3825
gene_biotype: protein_coding
description:
  Putative Polysaccharide export protein (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3827
symbol: NSJP_3827
gene_biotype: protein_coding
description:
  Putative Response regulator, LuxR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3831
symbol: NSJP_3831
gene_biotype: protein_coding
description:
  Putative 23S rRNA methyltransferase RlmB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: NSJP_3835
symbol: NSJP_3835
gene_biotype: protein_coding
description:
  Putative Pyruvate decarboxylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3855
symbol: acsA
gene_biotype: protein_coding
description:
  Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA.


ensembl_gene_id: NSJP_3860
symbol: NSJP_3860
gene_biotype: protein_coding
description:
  Putative Multidrug resistance protein MdtG; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3863
symbol: ribD
gene_biotype: protein_coding
description:
  Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: NSJP_3868
symbol: glyQ
gene_biotype: protein_coding
description:
  glycyl-tRNA synthetase, alpha chain; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: NSJP_3876
symbol: NSJP_3876
gene_biotype: protein_coding
description:
  Putative Copper-containing nitrite reductase (NO-forming); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3880
symbol: NSJP_3880
gene_biotype: protein_coding
description:
  Putative Nitrite transporter NirC; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3881
symbol: NSJP_3881
gene_biotype: protein_coding
description:
  Putative Multidrug resistance protein B; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the major facilitator superfamily.


ensembl_gene_id: NSJP_3882
symbol: NSJP_3882
gene_biotype: protein_coding
description:
  Putative Multidrug resistance outer membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3883
symbol: NSJP_3883
gene_biotype: protein_coding
description:
  Putative Multidrug resistance protein A (Modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3894
symbol: NSJP_3894
gene_biotype: protein_coding
description:
  Putative Sugar transporter of the major facilitator superfamily; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3896
symbol: NSJP_3896
gene_biotype: protein_coding
description:
  Putative Multidrug efflux transporter; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: NSJP_3897
symbol: NSJP_3897
gene_biotype: protein_coding
description:
  Putative Multidrug efflux transporter, membrane fusion protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: NSJP_3902
symbol: NSJP_3902
gene_biotype: protein_coding
description:
  Putative Regulatory protein, SyrP-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3905
symbol: NSJP_3905
gene_biotype: protein_coding
description:
  Putative Penicillin amidase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3906
symbol: rhbA
gene_biotype: protein_coding
description:
  Diaminobutyrate--2-oxoglutarate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: NSJP_3908
symbol: NSJP_3908
gene_biotype: protein_coding
description:
  Putative Polyketide synthase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3914
symbol: NSJP_3914
gene_biotype: protein_coding
description:
  Putative Protein FecR, ferric citrate sensor; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3915
symbol: NSJP_3915
gene_biotype: protein_coding
description:
  RNA polymerase, sigma-24 subunit, ECF subfamily; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: NSJP_3917
symbol: NSJP_3917
gene_biotype: protein_coding
description:
  Putative FecR; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3922
symbol: NSJP_3922
gene_biotype: protein_coding
description:
  Putative iron-regulated membrane protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3923
symbol: NSJP_3923
gene_biotype: protein_coding
description:
  Putative tonB-dependent receptor protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3934
symbol: NSJP_3934
gene_biotype: protein_coding
description:
  Protein of unknown function; No homology to any previously reported sequences; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: NSJP_3945
symbol: NSJP_3945
gene_biotype: protein_coding
description:
  Putative FecR protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3960
symbol: NSJP_3960
gene_biotype: protein_coding
description:
  Putative Divalent metal cation permease, ZupT-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3975
symbol: plsY
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: NSJP_3976
symbol: pgsA-2
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: NSJP_3977
symbol: kdsD
gene_biotype: protein_coding
description:
  D-arabinose 5-phosphate isomerase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the SIS family. GutQ/KpsF subfamily.


ensembl_gene_id: NSJP_3979
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: NSJP_3980
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: NSJP_3983
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding membrane protein; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: NSJP_3984
symbol: bioA
gene_biotype: protein_coding
description:
  Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.


ensembl_gene_id: NSJP_3987
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: NSJP_3990
symbol: carB
gene_biotype: protein_coding
description:
  Putative Peptidase M48, Ste24p; Function of homologous gene experimentally demonstrated in an other organism; enzyme;fragment of carbamoyl-phosphate synthase, large subunit (part 1).


ensembl_gene_id: NSJP_3991
symbol: NSJP_3991
gene_biotype: protein_coding
description:
  Putative Signal peptide peptidase SppA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_3992
symbol: carA
gene_biotype: protein_coding
description:
  Carbamoyl phosphate synthetase small subunit, glutamine amidotransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the CarA family.


ensembl_gene_id: NSJP_3994
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: NSJP_3995
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: NSJP_3996
symbol: pyrR
gene_biotype: protein_coding
description:
  Bifunctional protein PyrR [Includes: Pyrimidine operon regulatory protein; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.


ensembl_gene_id: NSJP_4011
symbol: NSJP_4011
gene_biotype: protein_coding
description:
  Putative General secretion pathway protein D; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_4020
symbol: NSJP_4020
gene_biotype: protein_coding
description:
  Putative Acyltransferase 3; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_4022
symbol: NSJP_4022
gene_biotype: protein_coding
description:
  Putative Cell wall biosynthesis glycosyltransferase-like protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_4025
symbol: NSJP_4025
gene_biotype: protein_coding
description:
  Putative O-antigen polymerase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_4027
symbol: NSJP_4027
gene_biotype: protein_coding
description:
  Putative Type 11 methyltransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_4030
symbol: NSJP_4030
gene_biotype: protein_coding
description:
  Putative Polysaccharide deacetylase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_4034
symbol: NSJP_4034
gene_biotype: protein_coding
description:
  Putative Aminotransferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: NSJP_4038
symbol: NSJP_4038
gene_biotype: protein_coding
description:
  Putative dTDP-glucose 4,6-dehydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_4041
symbol: NSJP_4041
gene_biotype: protein_coding
description:
  Putative Glycosyl transferase family 2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_4053
symbol: NSJP_4053
gene_biotype: protein_coding
description:
  Putative Glycosyl transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_4054
symbol: NSJP_4054
gene_biotype: protein_coding
description:
  Putative Oxidoreductase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_4064
symbol: NSJP_4064
gene_biotype: protein_coding
description:
  Putative O-antigen export system, permease protein RfbA; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_4066
symbol: NSJP_4066
gene_biotype: protein_coding
description:
  Putative Undecaprenyl-phosphate galactose phosphotransferase RfbP; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_4071
symbol: NSJP_4071
gene_biotype: protein_coding
description:
  Putative Transcription antitermination protein RfaH; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_4081
symbol: era
gene_biotype: protein_coding
description:
  Membrane-associated, 16S rRNA-binding GTPase; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: NSJP_4083
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: NSJP_4084
symbol: gatB
gene_biotype: protein_coding
description:
  Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: NSJP_4087
symbol: gatA
gene_biotype: protein_coding
description:
  Glutamyl-tRNA(Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: NSJP_4088
symbol: panD
gene_biotype: protein_coding
description:
  Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: NSJP_4089
symbol: gatC
gene_biotype: protein_coding
description:
  Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: NSJP_4090
symbol: glmS
gene_biotype: protein_coding
description:
  L-glutamine:D-fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: NSJP_4091
symbol: glmU
gene_biotype: protein_coding
description:
  Fused N-acetyl glucosamine-1-phosphate uridyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: NSJP_4095
symbol: metG
gene_biotype: protein_coding
description:
  Methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: NSJP_4101
symbol: NSJP_4101
gene_biotype: protein_coding
description:
  Putative P-loop guanosine triphosphatase, CobW-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_4102
symbol: NSJP_4102
gene_biotype: protein_coding
description:
  Putative Undecaprenyl-diphosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_4106
symbol: aroF-2
gene_biotype: protein_coding
description:
  3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, tyrosine-repressible; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).


ensembl_gene_id: NSJP_4109
symbol: NSJP_4109
gene_biotype: protein_coding
description:
  Putative N-acetylmuramoyl-L-alanine amidase AmiB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_4110
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: NSJP_4113
symbol: ispF
gene_biotype: protein_coding
description:
  2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: NSJP_4114
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: NSJP_4118
symbol: fbp-2
gene_biotype: protein_coding
description:
  Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the FBPase class 1 family.


ensembl_gene_id: NSJP_4121
symbol: cpsB
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the mannose-6-phosphate isomerase type 2 family.


ensembl_gene_id: NSJP_4123
symbol: rfbD
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.


ensembl_gene_id: NSJP_4124
symbol: rmlB
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6 dehydratase, NAD(P)-binding; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: NSJP_4125
symbol: rffH
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme.


ensembl_gene_id: NSJP_4138
symbol: NSJP_4138
gene_biotype: protein_coding
description:
  Putative Polysaccharide biosynthesis protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_4142
symbol: NSJP_4142
gene_biotype: protein_coding
description:
  Putative Transferase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_4149
symbol: NSJP_4149
gene_biotype: protein_coding
description:
  Putative Asparagine synthetase [glutamine-hydrolyzing] 1; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_4165
symbol: NSJP_4165
gene_biotype: protein_coding
description:
  Putative transcriptional regulator, AsnC family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


ensembl_gene_id: NSJP_4167
symbol: NSJP_4167
gene_biotype: protein_coding
description:
  Putative Lipopolysaccharide heptosyltransferase III (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.


