# pathwayInfo

id: IPR043168
description: DegV, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR043168
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR043168_DegV,_C-terminal_domain


id: IPR043428
description: High-affinity branched-chain amino acid transport system permease protein LivM-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR043428
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR043428_High-affinity_branched-chain_amino_acid_transport_system_permease_protein_LivM-like


id: IPR043429
description: ABC transporter membrane protein permease protein ArtM/GltK/GlnP/TcyL/YhdX-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR043429
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR043429_ABC_transporter_membrane_protein_permease_protein_ArtM/GltK/GlnP/TcyL/YhdX-like


id: IPR043502
description: DNA/RNA polymerase superfamily
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR043502
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR043502_DNA/RNA_polymerase_superfamily


id: IPR043504
description: Peptidase S1, PA clan, chymotrypsin-like fold
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR043504
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR043504_Peptidase_S1,_PA_clan,_chymotrypsin-like_fold


id: IPR043519
description: Nucleotidyltransferase superfamily
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR043519
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR043519_Nucleotidyltransferase_superfamily


id: IPR043630
description: Sgo0707, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR043630
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR043630_Sgo0707,_N-terminal_domain


id: IPR043702
description: Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit GatD
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR043702
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR043702_Lipid_II_isoglutaminyl_synthase_(glutamine-hydrolyzing)_subunit_GatD


id: IPR043703
description: Lipid II isoglutaminyl synthase (glutamine-hydrolyzing) subunit MurT
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR043703
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR043703_Lipid_II_isoglutaminyl_synthase_(glutamine-hydrolyzing)_subunit_MurT


id: IPR043708
description: Repeat of unknown function DUF5648
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR043708
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR043708_Repeat_of_unknown_function_DUF5648


id: IPR043738
description: Domain of unknown function DUF5683
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR043738
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR043738_Domain_of_unknown_function_DUF5683


id: IPR043797
description: 6-phospho-N-acetylmuramidase, N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR043797
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR043797_6-phospho-N-acetylmuramidase,_N-terminal


id: IPR043894
description: 6-phospho-N-acetylmuramidase, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR043894
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR043894_6-phospho-N-acetylmuramidase,_C-terminal


id: IPR044068
description: Core-binding (CB) domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR044068
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR044068_Core-binding_(CB)_domain


id: IPR044135
description: Methionyl-tRNA formyltransferase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR044135
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR044135_Methionyl-tRNA_formyltransferase,_C-terminal_domain


id: IPR044136
description: Lysine-tRNA ligase, class II, N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR044136
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR044136_Lysine-tRNA_ligase,_class_II,_N-terminal


id: IPR044140
description: Proline--tRNA ligase, anticodon binding domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR044140
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR044140_Proline--tRNA_ligase,_anticodon_binding_domain


id: IPR044141
description: AhpF, N-terminal domain, C-terminal TRX-fold subdomain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR044141
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR044141_AhpF,_N-terminal_domain,_C-terminal_TRX-fold_subdomain


id: IPR044142
description: AhpF, N-terminal domain, N-terminal TRX-fold subdomain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR044142
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR044142_AhpF,_N-terminal_domain,_N-terminal_TRX-fold_subdomain


id: IPR044145
description: Translation initiation factor IF-2, domain II
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR044145
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR044145_Translation_initiation_factor_IF-2,_domain_II


id: IPR044298
description: Adenine/Thymine-DNA glycosylase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR044298
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR044298_Adenine/Thymine-DNA_glycosylase


id: IPR044492
description: P-type ATPase, haloacid dehalogenase domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR044492
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR044492_P-type_ATPase,_haloacid_dehalogenase_domain


id: IPR044507
description: D-alanine:D-alanyl carrier protein ligase-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR044507
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR044507_D-alanine:D-alanyl_carrier_protein_ligase-like


id: IPR044666
description: Cyclophilin-type peptidyl-prolyl cis-trans isomerase, cyclophilin A-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR044666
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR044666_Cyclophilin-type_peptidyl-prolyl_cis-trans_isomerase,_cyclophilin_A-like


id: IPR044722
description: SecA, C-terminal helicase domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR044722
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR044722_SecA,_C-terminal_helicase_domain


id: IPR044751
description: Ion transporter-like, CBS domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR044751
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR044751_Ion_transporter-like,_CBS_domain


id: IPR044893
description: RNA polymerase Rpb1, clamp domain superfamily
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR044893
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR044893_RNA_polymerase_Rpb1,_clamp_domain_superfamily


id: IPR044911
description: V-type ATP synthase c/d subunit, domain 3 superfamily
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR044911
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR044911_V-type_ATP_synthase_c/d_subunit,_domain_3_superfamily


id: IPR044920
description: tRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal subdomain superfamily
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR044920
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR044920_tRNA_uridine_5-carboxymethylaminomethyl_modification_enzyme,_C-terminal_subdomain_superfamily


id: IPR044923
description: PolC, middle finger subdomain superfamily
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR044923
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR044923_PolC,_middle_finger_subdomain_superfamily


id: IPR044929
description: DNA/RNA non-specific endonuclease superfamily
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR044929
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR044929_DNA/RNA_non-specific_endonuclease_superfamily


id: IPR044957
description: Ribosomal protein L32p, bacterial type
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR044957
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR044957_Ribosomal_protein_L32p,_bacterial_type


id: IPR045018
description: Azaguanine-like transporters
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR045018
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR045018_Azaguanine-like_transporters


id: IPR045023
description: Acyl-[acyl-carrier-protein] hydrolase FATA/B
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR045023
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR045023_Acyl-[acyl-carrier-protein]_hydrolase_FATA/B


id: IPR045028
description: Helicase superfamily 1/2, DinG/Rad3-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR045028
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR045028_Helicase_superfamily_1/2,_DinG/Rad3-like


id: IPR045060
description: Phenylalanine-tRNA ligase, class IIc, beta subunit
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR045060
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR045060_Phenylalanine-tRNA_ligase,_class_IIc,_beta_subunit


id: IPR045061
description: Tubulin-like protein FtsZ/CetZ
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR045061
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR045061_Tubulin-like_protein_FtsZ/CetZ


id: IPR045070
description: Multidrug and toxic compound extrusion MepA-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR045070
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR045070_Multidrug_and_toxic_compound_extrusion_MepA-like


id: IPR045076
description: DNA mismatch repair MutS family
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR045076
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR045076_DNA_mismatch_repair_MutS_family


id: IPR045082
description: ATP synthase, F0 complex, subunit A, bacterial/chloroplast
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR045082
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR045082_ATP_synthase,_F0_complex,_subunit_A,_bacterial/chloroplast


id: IPR045085
description: DNA polymerase III, subunit gamma/tau, helical lid domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR045085
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR045085_DNA_polymerase_III,_subunit_gamma/tau,_helical_lid_domain


id: IPR045097
description: Thymidylate synthase/dCMP hydroxymethylase
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR045097
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR045097_Thymidylate_synthase/dCMP_hydroxymethylase


id: IPR045155
description: Beta-lactamase class A, catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR045155
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR045155_Beta-lactamase_class_A,_catalytic_domain


id: IPR045229
description: Thiamine pyrophosphate enzyme
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR045229
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR045229_Thiamine_pyrophosphate_enzyme


id: IPR045276
description: Mechanosensitive ion channel YbiO
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR045276
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR045276_Mechanosensitive_ion_channel_YbiO


id: IPR045304
description: Serine acetyltransferase, LbH domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR045304
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR045304_Serine_acetyltransferase,_LbH_domain


id: IPR045357
description: Aminopeptidase N-like , N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR045357
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR045357_Aminopeptidase_N-like_,_N-terminal_domain


id: IPR045462
description: Aminoacyl-tRNA synthetase, class I, anticodon-binding
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR045462
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR045462_Aminoacyl-tRNA_synthetase,_class_I,_anticodon-binding


id: IPR045540
description: YegS/DAGK, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR045540
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR045540_YegS/DAGK,_C-terminal_domain


id: IPR045562
description: ATP-dependent DNA helicase RecG, domain 3, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR045562
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR045562_ATP-dependent_DNA_helicase_RecG,_domain_3,_C-terminal


id: IPR045585
description: Diadenylate cyclase CdaA, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR045585
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR045585_Diadenylate_cyclase_CdaA,_N-terminal_domain


id: IPR045595
description: SUF system FeS cluster assembly, SufBD, N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR045595
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR045595_SUF_system_FeS_cluster_assembly,_SufBD,_N-terminal


id: IPR045600
description: RelA/SpoT, AH and RIS domains
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR045600
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR045600_RelA/SpoT,_AH_and_RIS_domains


id: IPR045851
description: AMP-binding enzyme, C-terminal domain superfamily
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR045851
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR045851_AMP-binding_enzyme,_C-terminal_domain_superfamily


id: IPR045853
description: Peptide chain release factor class I superfamily
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR045853
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR045853_Peptide_chain_release_factor_class_I_superfamily


id: IPR045857
description: Oligo-1,6-glucosidase, domain 2
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR045857
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR045857_Oligo-1,6-glucosidase,_domain_2


id: IPR045861
description: CorA, cytoplasmic domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR045861
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR045861_CorA,_cytoplasmic_domain


id: IPR045863
description: CorA, transmembrane region
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR045863
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR045863_CorA,_transmembrane_region


id: IPR045864
description: Class II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR045864
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR045864_Class_II_Aminoacyl-tRNA_synthetase/Biotinyl_protein_ligase_(BPL)_and_lipoyl_protein_ligase_(LPL)


id: IPR045867
description: DNA-directed RNA polymerase, subunit beta-prime
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR045867
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR045867_DNA-directed_RNA_polymerase,_subunit_beta-prime


id: IPR046335
description: Transcriptional regulator LacI/GalR-like, sensor domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR046335
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR046335_Transcriptional_regulator_LacI/GalR-like,_sensor_domain


id: IPR046346
description: Aminoacid dehydrogenase-like, N-terminal domain superfamily
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR046346
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR046346_Aminoacid_dehydrogenase-like,_N-terminal_domain_superfamily


id: IPR046357
description: Peptidyl-prolyl cis-trans isomerase domain superfamily
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR046357
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR046357_Peptidyl-prolyl_cis-trans_isomerase_domain_superfamily


id: IPR046425
description: Clp protease, ATP-binding subunit ClpX, bacteria
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR046425
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR046425_Clp_protease,_ATP-binding_subunit_ClpX,_bacteria


id: IPR046457
description: Phosphomannose isomerase type I, catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR046457
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR046457_Phosphomannose_isomerase_type_I,_catalytic_domain


id: IPR046469
description: S-adenosyl-l-methionine hydroxide adenosyltransferase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR046469
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR046469_S-adenosyl-l-methionine_hydroxide_adenosyltransferase,_N-terminal_domain


id: IPR046470
description: S-adenosyl-l-methionine hydroxide adenosyltransferase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR046470
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR046470_S-adenosyl-l-methionine_hydroxide_adenosyltransferase,_C-terminal_domain


id: IPR046473
description: Sgo0707-like, N2 domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR046473
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR046473_Sgo0707-like,_N2_domain


id: IPR046664
description: Protein of unknown function DUF6773
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR046664
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR046664_Protein_of_unknown_function_DUF6773


id: IPR046825
description: Prephenate dehydrogenase, dimerization domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR046825
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR046825_Prephenate_dehydrogenase,_dimerization_domain


id: IPR046826
description: Prephenate dehydrogenase, nucleotide-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR046826
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR046826_Prephenate_dehydrogenase,_nucleotide-binding_domain


id: IPR046884
description: tRNA-specific 2-thiouridylase MnmA-like, central domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR046884
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR046884_tRNA-specific_2-thiouridylase_MnmA-like,_central_domain


id: IPR046885
description: tRNA-specific 2-thiouridylase MnmA-like, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR046885
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR046885_tRNA-specific_2-thiouridylase_MnmA-like,_C-terminal_domain


id: IPR046886
description: Ribosomal RNA small subunit methyltransferase E, methyltransferase domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR046886
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR046886_Ribosomal_RNA_small_subunit_methyltransferase_E,_methyltransferase_domain


id: IPR046887
description: Ribosomal RNA small subunit methyltransferase E, PUA-like domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR046887
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR046887_Ribosomal_RNA_small_subunit_methyltransferase_E,_PUA-like_domain


id: IPR046893
description: MutS2 and Smr-associated SH3 domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR046893
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR046893_MutS2_and_Smr-associated_SH3_domain


id: IPR046947
description: Transcriptional regulatory protein LytR-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR046947
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR046947_Transcriptional_regulatory_protein_LytR-like


id: IPR046952
description: Glutathione reductase/thioredoxin reductase-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR046952
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR046952_Glutathione_reductase/thioredoxin_reductase-like


id: IPR046977
description: rRNA (guanine-N(2)-)-methyltransferase RsmC/RlmG
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR046977
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR046977_rRNA_(guanine-N(2)-)-methyltransferase_RsmC/RlmG


id: IPR047001
description: tRNA uridine 5-carboxymethylaminomethyl modification enzyme, C-terminal subdomain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR047001
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR047001_tRNA_uridine_5-carboxymethylaminomethyl_modification_enzyme,_C-terminal_subdomain


id: IPR047041
description: GTP-binding protein BipA, GTP-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR047041
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR047041_GTP-binding_protein_BipA,_GTP-binding_domain


id: IPR047042
description: GTP-binding protein BipA, domain 2
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR047042
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR047042_GTP-binding_protein_BipA,_domain_2


id: IPR047043
description: GTP-binding protein BipA, domain 3
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR047043
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR047043_GTP-binding_protein_BipA,_domain_3


id: IPR047048
description: 16S/23S rRNA (cytidine-2-O)-methyltransferase TlyA
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR047048
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR047048_16S/23S_rRNA_(cytidine-2-O)-methyltransferase_TlyA


id: IPR047057
description: MerR transcriptional regulator
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR047057
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR047057_MerR_transcriptional_regulator


id: IPR047084
description: Glucosamine-fructose-6-phosphate aminotransferase, isomerising, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR047084
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR047084_Glucosamine-fructose-6-phosphate_aminotransferase,_isomerising,_N-terminal_domain


id: IPR047089
description: Aspartate-tRNA ligase, type 1, anticodon recognition domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR047089
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR047089_Aspartate-tRNA_ligase,_type_1,_anticodon_recognition_domain


id: IPR047090
description: Aspartate-tRNA ligase, type 1, core domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR047090
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR047090_Aspartate-tRNA_ligase,_type_1,_core_domain


id: IPR047112
description: ATP-dependent DNA helicase RecG/Transcription-repair-coupling factor
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR047112
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR047112_ATP-dependent_DNA_helicase_RecG/Transcription-repair-coupling_factor


id: IPR047124
description: Uracil-DNA glycosylase-like HI_0220.2
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR047124
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR047124_Uracil-DNA_glycosylase-like_HI_0220.2


id: IPR047194
description: CwlT-like, lysozyme domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR047194
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR047194_CwlT-like,_lysozyme_domain


id: IPR047196
description: Membrane insertase YidC/ALB, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR047196
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR047196_Membrane_insertase_YidC/ALB,_C-terminal


id: IPR047199
description: Magnesium transporter CorA-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR047199
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR047199_Magnesium_transporter_CorA-like


id: IPR047215
description: Galactose mutarotase-like
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR047215
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR047215_Galactose_mutarotase-like


id: IPR047246
description: Threonine-tRNA ligase, class IIa, anticodon-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR047246
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR047246_Threonine-tRNA_ligase,_class_IIa,_anticodon-binding_domain


id: IPR047296
description: UvrC/Cho-like, GIY-YIG domain
memo: https://www.ebi.ac.uk/interpro/entry/InterPro/IPR047296
name:
  Protein Domains and Features (InterPro).STRING_v12.0_1338_STRINGid_IPR047296_UvrC/Cho-like,_GIY-YIG_domain


id: KW-0100
description: Branched-chain amino acid biosynthesis
name:
  Annotated Keywords (UniProt).STRING_v12.0_1338_STRINGid_KW-0100_Branched-chain_amino_acid_biosynthesis


id: MAP-1222499
description: Latent infection - Other responses of Mtb to phagocytosis
memo: https://reactome.org/content/detail/MAP-1222499
name:
  Reactome Pathways.STRING_v12.0_1338_STRINGid_MAP-1222499_Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis


id: MAP-8876384
description: Listeria monocytogenes entry into host cells
memo: https://reactome.org/content/detail/MAP-8876384
name:
  Reactome Pathways.STRING_v12.0_1338_STRINGid_MAP-8876384_Listeria_monocytogenes_entry_into_host_cells


id: MAP-8876493
description: InlA-mediated entry of Listeria monocytogenes into host cells
memo: https://reactome.org/content/detail/MAP-8876493
name:
  Reactome Pathways.STRING_v12.0_1338_STRINGid_MAP-8876493_InlA-mediated_entry_of_Listeria_monocytogenes_into_host_cells


id: MAP-983169
description: Class I MHC mediated antigen processing & presentation
memo: https://reactome.org/content/detail/MAP-983169
name:
  Reactome Pathways.STRING_v12.0_1338_STRINGid_MAP-983169_Class_I_MHC_mediated_antigen_processing_&_presentation


id: PF00006
description: ATP synthase alpha/beta family, nucleotide-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00006
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00006_ATP_synthase_alpha/beta_family,_nucleotide-binding_domain


id: PF00056
description: Lactate/malate dehydrogenase, NAD binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00056
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00056_Lactate/malate_dehydrogenase,_NAD_binding_domain


id: PF00070
description: Pyridine nucleotide-disulphide oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00070
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00070_Pyridine_nucleotide-disulphide_oxidoreductase


id: PF00081
description: Iron/manganese superoxide dismutases, alpha-hairpin domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00081
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00081_Iron/manganese_superoxide_dismutases,_alpha-hairpin_domain


id: PF00126
description: Bacterial regulatory helix-turn-helix protein, lysR family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00126
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00126_Bacterial_regulatory_helix-turn-helix_protein,_lysR_family


id: PF00132
description: Bacterial transferase hexapeptide (six repeats)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00132
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00132_Bacterial_transferase_hexapeptide_(six_repeats)


id: PF00160
description: Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00160
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00160_Cyclophilin_type_peptidyl-prolyl_cis-trans_isomerase/CLD


id: PF00165
description: Bacterial regulatory helix-turn-helix proteins, AraC family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00165
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00165_Bacterial_regulatory_helix-turn-helix_proteins,_AraC_family


id: PF00185
description: Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00185
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00185_Aspartate/ornithine_carbamoyltransferase,_Asp/Orn_binding_domain


id: PF00205
description: Thiamine pyrophosphate enzyme, central domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00205
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00205_Thiamine_pyrophosphate_enzyme,_central_domain


id: PF00254
description: FKBP-type peptidyl-prolyl cis-trans isomerase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00254
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00254_FKBP-type_peptidyl-prolyl_cis-trans_isomerase


id: PF00275
description: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00275
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00275_EPSP_synthase_(3-phosphoshikimate_1-carboxyvinyltransferase)


id: PF00306
description: ATP synthase alpha/beta chain, C terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00306
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00306_ATP_synthase_alpha/beta_chain,_C_terminal_domain


id: PF00317
description: Ribonucleotide reductase, all-alpha domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00317
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00317_Ribonucleotide_reductase,_all-alpha_domain


id: PF00358
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00358
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00358_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system,_EIIA_1


id: PF00359
description: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00359
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00359_Phosphoenolpyruvate-dependent_sugar_phosphotransferase_system,_EIIA_2


id: PF00368
description: Hydroxymethylglutaryl-coenzyme A reductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00368
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00368_Hydroxymethylglutaryl-coenzyme_A_reductase


id: PF00370
description: FGGY family of carbohydrate kinases, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00370
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00370_FGGY_family_of_carbohydrate_kinases,_N-terminal_domain


id: PF00392
description: Bacterial regulatory proteins, gntR family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00392
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00392_Bacterial_regulatory_proteins,_gntR_family


id: PF00401
description: ATP synthase, Delta/Epsilon chain, long alpha-helix domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00401
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00401_ATP_synthase,_Delta/Epsilon_chain,_long_alpha-helix_domain


id: PF00408
description: Phosphoglucomutase/phosphomannomutase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00408
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00408_Phosphoglucomutase/phosphomannomutase,_C-terminal_domain


id: PF00438
description: S-adenosylmethionine synthetase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00438
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00438_S-adenosylmethionine_synthetase,_N-terminal_domain


id: PF00440
description: Bacterial regulatory proteins, tetR family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00440
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00440_Bacterial_regulatory_proteins,_tetR_family


id: PF00456
description: Transketolase, thiamine diphosphate binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00456
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00456_Transketolase,_thiamine_diphosphate_binding_domain


id: PF00479
description: Glucose-6-phosphate dehydrogenase, NAD binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00479
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00479_Glucose-6-phosphate_dehydrogenase,_NAD_binding_domain


id: PF00482
description: Type II secretion system (T2SS), protein F
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00482
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00482_Type_II_secretion_system_(T2SS),_protein_F


id: PF00485
description: Phosphoribulokinase / Uridine kinase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00485
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00485_Phosphoribulokinase_/_Uridine_kinase_family


id: PF00496
description: Bacterial extracellular solute-binding proteins, family 5 Middle
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00496
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00496_Bacterial_extracellular_solute-binding_proteins,_family_5_Middle


id: PF00528
description: Binding-protein-dependent transport system inner membrane component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00528
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00528_Binding-protein-dependent_transport_system_inner_membrane_component


id: PF00542
description: Ribosomal protein L7/L12 C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00542
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00542_Ribosomal_protein_L7/L12_C-terminal_domain


id: PF00584
description: SecE/Sec61-gamma subunits of protein translocation complex
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00584
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00584_SecE/Sec61-gamma_subunits_of_protein_translocation_complex


id: PF00586
description: AIR synthase related protein, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00586
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00586_AIR_synthase_related_protein,_N-terminal_domain


id: PF00587
description: tRNA synthetase class II core domain (G, H, P, S and T)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00587
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00587_tRNA_synthetase_class_II_core_domain_(G,_H,_P,_S_and_T)


id: PF00590
description: Tetrapyrrole (Corrin/Porphyrin) Methylases
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00590
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00590_Tetrapyrrole_(Corrin/Porphyrin)_Methylases


id: PF00707
description: Translation initiation factor IF-3, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00707
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00707_Translation_initiation_factor_IF-3,_C-terminal_domain


id: PF00724
description: NADH:flavin oxidoreductase / NADH oxidase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00724
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00724_NADH:flavin_oxidoreductase_/_NADH_oxidase_family


id: PF00728
description: Glycosyl hydrolase family 20, catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00728
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00728_Glycosyl_hydrolase_family_20,_catalytic_domain


id: PF00749
description: tRNA synthetases class I (E and Q), catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00749
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00749_tRNA_synthetases_class_I_(E_and_Q),_catalytic_domain


id: PF00763
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00763
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00763_Tetrahydrofolate_dehydrogenase/cyclohydrolase,_catalytic_domain


id: PF00828
description: Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00828
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00828_Ribosomal_proteins_50S-L15,_50S-L18e,_60S-L27A


id: PF00903
description: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00903
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00903_Glyoxalase/Bleomycin_resistance_protein/Dioxygenase_superfamily


id: PF00905
description: Penicillin binding protein transpeptidase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00905
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00905_Penicillin_binding_protein_transpeptidase_domain


id: PF00923
description: Transaldolase/Fructose-6-phosphate aldolase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF00923
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF00923_Transaldolase/Fructose-6-phosphate_aldolase


id: PF01035
description: 6-O-methylguanine DNA methyltransferase, DNA binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01035
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF01035_6-O-methylguanine_DNA_methyltransferase,_DNA_binding_domain


id: PF01041
description: DegT/DnrJ/EryC1/StrS aminotransferase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01041
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF01041_DegT/DnrJ/EryC1/StrS_aminotransferase_family


id: PF01087
description: Galactose-1-phosphate uridyl transferase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01087
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF01087_Galactose-1-phosphate_uridyl_transferase,_N-terminal_domain


id: PF01128
description: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01128
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF01128_2-C-methyl-D-erythritol_4-phosphate_cytidylyltransferase


id: PF01135
description: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01135
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF01135_Protein-L-isoaspartate(D-aspartate)_O-methyltransferase_(PCMT)


id: PF01154
description: Hydroxymethylglutaryl-coenzyme A synthase N terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01154
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF01154_Hydroxymethylglutaryl-coenzyme_A_synthase_N_terminal


id: PF01182
description: Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01182
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF01182_Glucosamine-6-phosphate_isomerases/6-phosphogluconolactonase


id: PF01210
description: NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01210
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF01210_NAD-dependent_glycerol-3-phosphate_dehydrogenase_N-terminus


id: PF01255
description: Putative undecaprenyl diphosphate synthase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01255
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF01255_Putative_undecaprenyl_diphosphate_synthase


id: PF01297
description: Zinc-uptake complex component A periplasmic
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01297
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF01297_Zinc-uptake_complex_component_A_periplasmic


id: PF01326
description: Pyruvate phosphate dikinase, AMP/ATP-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01326
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF01326_Pyruvate_phosphate_dikinase,_AMP/ATP-binding_domain


id: PF01370
description: NAD dependent epimerase/dehydratase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01370
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF01370_NAD_dependent_epimerase/dehydratase_family


id: PF01406
description: tRNA synthetases class I (C) catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01406
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF01406_tRNA_synthetases_class_I_(C)_catalytic_domain


id: PF01408
description: Oxidoreductase family, NAD-binding Rossmann fold
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01408
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF01408_Oxidoreductase_family,_NAD-binding_Rossmann_fold


id: PF01420
description: Type I restriction modification DNA specificity domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01420
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF01420_Type_I_restriction_modification_DNA_specificity_domain


id: PF01509
description: TruB family pseudouridylate synthase (N terminal domain)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01509
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF01509_TruB_family_pseudouridylate_synthase_(N_terminal_domain)


id: PF01547
description: Bacterial extracellular solute-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01547
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF01547_Bacterial_extracellular_solute-binding_protein


id: PF01648
description: 4-phosphopantetheinyl transferase superfamily
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01648
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF01648_4-phosphopantetheinyl_transferase_superfamily


id: PF01717
description: Cobalamin-independent synthase, Catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01717
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF01717_Cobalamin-independent_synthase,_Catalytic_domain


id: PF01741
description: Large-conductance mechanosensitive channel, MscL
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01741
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF01741_Large-conductance_mechanosensitive_channel,_MscL


id: PF01812
description: 5-formyltetrahydrofolate cyclo-ligase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01812
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF01812_5-formyltetrahydrofolate_cyclo-ligase_family


id: PF01832
description: Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF01832
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF01832_Mannosyl-glycoprotein_endo-beta-N-acetylglucosaminidase


id: PF02255
description: PTS system, Lactose/Cellobiose specific IIA subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02255
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02255_PTS_system,_Lactose/Cellobiose_specific_IIA_subunit


id: PF02278
description: Polysaccharide lyase family 8, super-sandwich domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02278
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02278_Polysaccharide_lyase_family_8,_super-sandwich_domain


id: PF02302
description: PTS system, Lactose/Cellobiose specific IIB subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02302
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02302_PTS_system,_Lactose/Cellobiose_specific_IIB_subunit


id: PF02367
description: Threonylcarbamoyl adenosine biosynthesis protein TsaE
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02367
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02367_Threonylcarbamoyl_adenosine_biosynthesis_protein_TsaE


id: PF02410
description: Ribosomal silencing factor during starvation
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02410
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02410_Ribosomal_silencing_factor_during_starvation_


id: PF02482
description: Sigma 54 modulation protein / S30EA ribosomal protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02482
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02482_Sigma_54_modulation_protein_/_S30EA_ribosomal_protein


id: PF02588
description: Uncharacterised 5xTM membrane BCR, YitT family COG1284
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02588
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02588_Uncharacterised_5xTM_membrane_BCR,_YitT_family_COG1284


id: PF02608
description: ABC transporter substrate-binding protein PnrA-like
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02608
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02608_ABC_transporter_substrate-binding_protein_PnrA-like


id: PF02645
description: Uncharacterised protein, DegV family COG1307
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02645
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02645_Uncharacterised_protein,_DegV_family_COG1307


id: PF02653
description: Branched-chain amino acid transport system / permease component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02653
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02653_Branched-chain_amino_acid_transport_system_/_permease_component


id: PF02683
description: Cytochrome C biogenesis protein transmembrane region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02683
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02683_Cytochrome_C_biogenesis_protein_transmembrane_region


id: PF02729
description: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02729
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02729_Aspartate/ornithine_carbamoyltransferase,_carbamoyl-P_binding_domain


id: PF02744
description: Galactose-1-phosphate uridyl transferase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02744
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02744_Galactose-1-phosphate_uridyl_transferase,_C-terminal_domain


id: PF02769
description: AIR synthase related protein, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02769
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02769_AIR_synthase_related_protein,_C-terminal_domain


id: PF02772
description: S-adenosylmethionine synthetase, central domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02772
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02772_S-adenosylmethionine_synthetase,_central_domain


id: PF02773
description: S-adenosylmethionine synthetase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02773
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02773_S-adenosylmethionine_synthetase,_C-terminal_domain


id: PF02774
description: Semialdehyde dehydrogenase, dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02774
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02774_Semialdehyde_dehydrogenase,_dimerisation_domain


id: PF02775
description: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02775
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02775_Thiamine_pyrophosphate_enzyme,_C-terminal_TPP_binding_domain


id: PF02776
description: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02776
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02776_Thiamine_pyrophosphate_enzyme,_N-terminal_TPP_binding_domain


id: PF02777
description: Iron/manganese superoxide dismutases, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02777
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02777_Iron/manganese_superoxide_dismutases,_C-terminal_domain


id: PF02781
description: Glucose-6-phosphate dehydrogenase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02781
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02781_Glucose-6-phosphate_dehydrogenase,_C-terminal_domain


id: PF02782
description: FGGY family of carbohydrate kinases, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02782
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02782_FGGY_family_of_carbohydrate_kinases,_C-terminal_domain


id: PF02784
description: Pyridoxal-dependent decarboxylase, pyridoxal binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02784
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02784_Pyridoxal-dependent_decarboxylase,_pyridoxal_binding_domain


id: PF02786
description: Carbamoyl-phosphate synthase L chain, ATP binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02786
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02786_Carbamoyl-phosphate_synthase_L_chain,_ATP_binding_domain


id: PF02800
description: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02800
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02800_Glyceraldehyde_3-phosphate_dehydrogenase,_C-terminal_domain


id: PF02812
description: Glu/Leu/Phe/Val dehydrogenase, dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02812
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02812_Glu/Leu/Phe/Val_dehydrogenase,_dimerisation_domain


id: PF02823
description: ATP synthase, Delta/Epsilon chain, beta-sandwich domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02823
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02823_ATP_synthase,_Delta/Epsilon_chain,_beta-sandwich_domain


id: PF02836
description: Glycosyl hydrolases family 2, TIM barrel domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02836
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02836_Glycosyl_hydrolases_family_2,_TIM_barrel_domain


id: PF02837
description: Glycosyl hydrolases family 2, sugar binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02837
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02837_Glycosyl_hydrolases_family_2,_sugar_binding_domain


id: PF02844
description: Phosphoribosylglycinamide synthetase, N domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02844
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02844_Phosphoribosylglycinamide_synthetase,_N_domain


id: PF02852
description: Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02852
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02852_Pyridine_nucleotide-disulphide_oxidoreductase,_dimerisation_domain


id: PF02861
description: Clp amino terminal domain, pathogenicity island component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02861
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02861_Clp_amino_terminal_domain,_pathogenicity_island_component


id: PF02866
description: Lactate/malate dehydrogenase, alpha/beta C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02866
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02866_Lactate/malate_dehydrogenase,_alpha/beta_C-terminal_domain


id: PF02870
description: 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02870
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02870_6-O-methylguanine_DNA_methyltransferase,_ribonuclease-like_domain


id: PF02873
description: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02873
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02873_UDP-N-acetylenolpyruvoylglucosamine_reductase,_C-terminal_domain


id: PF02874
description: ATP synthase alpha/beta family, beta-barrel domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02874
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02874_ATP_synthase_alpha/beta_family,_beta-barrel_domain


id: PF02875
description: Mur ligase family, glutamate ligase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02875
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02875_Mur_ligase_family,_glutamate_ligase_domain


id: PF02878
description: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02878
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02878_Phosphoglucomutase/phosphomannomutase,_alpha/beta/alpha_domain_I


id: PF02879
description: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02879
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02879_Phosphoglucomutase/phosphomannomutase,_alpha/beta/alpha_domain_II


id: PF02880
description: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02880
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02880_Phosphoglucomutase/phosphomannomutase,_alpha/beta/alpha_domain_III


id: PF02882
description: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02882
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02882_Tetrahydrofolate_dehydrogenase/cyclohydrolase,_NAD(P)-binding_domain


id: PF02884
description: Polysaccharide lyase family 8, C-terminal beta-sandwich domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02884
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02884_Polysaccharide_lyase_family_8,_C-terminal_beta-sandwich_domain


id: PF02885
description: Glycosyl transferase family, helical bundle domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02885
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02885_Glycosyl_transferase_family,_helical_bundle_domain


id: PF02912
description: Aminoacyl tRNA synthetase class II, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02912
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02912_Aminoacyl_tRNA_synthetase_class_II,_N-terminal_domain


id: PF02922
description: Carbohydrate-binding module 48 (Isoamylase N-terminal domain)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF02922
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF02922_Carbohydrate-binding_module_48_(Isoamylase_N-terminal_domain)


id: PF03033
description: Glycosyltransferase family 28 N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03033
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF03033_Glycosyltransferase_family_28_N-terminal_domain


id: PF03062
description: MBOAT, membrane-bound O-acyltransferase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03062
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF03062_MBOAT,_membrane-bound_O-acyltransferase_family


id: PF03083
description: Sugar efflux transporter for intercellular exchange
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03083
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF03083_Sugar_efflux_transporter_for_intercellular_exchange


id: PF03118
description: Bacterial RNA polymerase, alpha chain C terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03118
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF03118_Bacterial_RNA_polymerase,_alpha_chain_C_terminal_domain


id: PF03372
description: Endonuclease/Exonuclease/phosphatase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03372
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF03372_Endonuclease/Exonuclease/phosphatase_family


id: PF03446
description: NAD binding domain of 6-phosphogluconate dehydrogenase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03446
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF03446_NAD_binding_domain_of_6-phosphogluconate_dehydrogenase


id: PF03447
description: Homoserine dehydrogenase, NAD binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03447
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF03447_Homoserine_dehydrogenase,_NAD_binding_domain


id: PF03551
description: Transcriptional regulator PadR-like family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03551
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF03551_Transcriptional_regulator_PadR-like_family


id: PF03611
description: PTS system sugar-specific permease component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03611
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF03611_PTS_system_sugar-specific_permease_component


id: PF03613
description: PTS system mannose/fructose/sorbose family IID component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03613
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF03613_PTS_system_mannose/fructose/sorbose_family_IID_component


id: PF03717
description: Penicillin-binding Protein dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03717
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF03717_Penicillin-binding_Protein_dimerisation_domain


id: PF03726
description: Polyribonucleotide nucleotidyltransferase, RNA binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03726
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF03726_Polyribonucleotide_nucleotidyltransferase,_RNA_binding_domain


id: PF03767
description: HAD superfamily, subfamily IIIB (Acid phosphatase)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03767
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF03767_HAD_superfamily,_subfamily_IIIB_(Acid_phosphatase)


id: PF03780
description: Asp23 family, cell envelope-related function
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03780
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF03780_Asp23_family,_cell_envelope-related_function


id: PF03830
description: PTS system sorbose subfamily IIB component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03830
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF03830_PTS_system_sorbose_subfamily_IIB_component


id: PF03989
description: DNA gyrase C-terminal domain, beta-propeller
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03989
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF03989_DNA_gyrase_C-terminal_domain,_beta-propeller


id: PF04069
description: Substrate binding domain of ABC-type glycine betaine transport system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04069
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF04069_Substrate_binding_domain_of_ABC-type_glycine_betaine_transport_system


id: PF04095
description: Nicotinate phosphoribosyltransferase (NAPRTase) family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04095
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF04095_Nicotinate_phosphoribosyltransferase_(NAPRTase)_family


id: PF04101
description: Glycosyltransferase family 28 C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04101
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF04101_Glycosyltransferase_family_28_C-terminal_domain


id: PF04127
description: DNA / pantothenate metabolism flavoprotein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04127
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF04127_DNA_/_pantothenate_metabolism_flavoprotein


id: PF04131
description: Putative N-acetylmannosamine-6-phosphate epimerase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04131
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF04131_Putative_N-acetylmannosamine-6-phosphate_epimerase


id: PF04140
description: Isoprenylcysteine carboxyl methyltransferase (ICMT) family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04140
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF04140_Isoprenylcysteine_carboxyl_methyltransferase_(ICMT)_family_


id: PF04245
description: 37-kD nucleoid-associated bacterial protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04245
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF04245_37-kD_nucleoid-associated_bacterial_protein


id: PF04263
description: Thiamin pyrophosphokinase, catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04263
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF04263_Thiamin_pyrophosphokinase,_catalytic_domain


id: PF04313
description: Type I restriction enzyme R protein N terminus (HSDR_N)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04313
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF04313_Type_I_restriction_enzyme_R_protein_N_terminus_(HSDR_N)


id: PF04760
description: Translation initiation factor IF-2, N-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04760
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF04760_Translation_initiation_factor_IF-2,_N-terminal_region


id: PF04775
description: Acyl-CoA thioester hydrolase/BAAT N-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04775
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF04775_Acyl-CoA_thioester_hydrolase/BAAT_N-terminal_region


id: PF05066
description: HB1, ASXL, restriction endonuclease HTH domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05066
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF05066_HB1,_ASXL,_restriction_endonuclease_HTH_domain


id: PF05198
description: Translation initiation factor IF-3, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05198
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF05198_Translation_initiation_factor_IF-3,_N-terminal_domain


id: PF05362
description: Lon protease (S16) C-terminal proteolytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05362
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF05362_Lon_protease_(S16)_C-terminal_proteolytic_domain


id: PF05389
description: Negative regulator of genetic competence (MecA)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05389
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF05389_Negative_regulator_of_genetic_competence_(MecA)


id: PF05698
description: Bacterial trigger factor protein (TF) C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05698
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF05698_Bacterial_trigger_factor_protein_(TF)_C-terminus


id: PF05708
description: Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05708
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF05708_Permuted_papain-like_amidase_enzyme,_YaeF/YiiX,_C92_family


id: PF05979
description: Bacterial protein of unknown function (DUF896)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05979
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF05979_Bacterial_protein_of_unknown_function_(DUF896)


id: PF05987
description: Bacterial protein of unknown function (DUF898)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05987
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF05987_Bacterial_protein_of_unknown_function_(DUF898)


id: PF06014
description: Bacterial protein of unknown function (DUF910)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06014
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF06014_Bacterial_protein_of_unknown_function_(DUF910)


id: PF06026
description: Ribose 5-phosphate isomerase A (phosphoriboisomerase A)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06026
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF06026_Ribose_5-phosphate_isomerase_A_(phosphoriboisomerase_A)


id: PF06028
description: Alpha/beta hydrolase of unknown function (DUF915)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06028
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF06028_Alpha/beta_hydrolase_of_unknown_function_(DUF915)


id: PF06103
description: Bacterial protein of unknown function (DUF948)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06103
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF06103_Bacterial_protein_of_unknown_function_(DUF948)


id: PF06107
description: Bacterial protein of unknown function (DUF951)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06107
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF06107_Bacterial_protein_of_unknown_function_(DUF951)


id: PF06124
description: Staphylococcal protein of unknown function (DUF960)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06124
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF06124_Staphylococcal_protein_of_unknown_function_(DUF960)


id: PF06133
description: Control of competence regulator ComK, YlbF/YmcA
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06133
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF06133_Control_of_competence_regulator_ComK,_YlbF/YmcA


id: PF06305
description: Lipopolysaccharide assembly protein A domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06305
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF06305_Lipopolysaccharide_assembly_protein_A_domain


id: PF06970
description: Replication initiator protein A (RepA) N-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06970
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF06970_Replication_initiator_protein_A_(RepA)_N-terminus


id: PF07155
description: ECF-type riboflavin transporter, S component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07155
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF07155_ECF-type_riboflavin_transporter,_S_component


id: PF07261
description: Replication initiation and membrane attachment
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07261
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF07261_Replication_initiation_and_membrane_attachment


id: PF07479
description: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07479
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF07479_NAD-dependent_glycerol-3-phosphate_dehydrogenase_C-terminus


id: PF07521
description: Zn-dependent metallo-hydrolase RNA specificity domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07521
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF07521_Zn-dependent_metallo-hydrolase_RNA_specificity_domain


id: PF07685
description: CobB/CobQ-like glutamine amidotransferase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07685
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF07685_CobB/CobQ-like_glutamine_amidotransferase_domain


id: PF07733
description: Bacterial DNA polymerase III alpha NTPase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07733
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF07733_Bacterial_DNA_polymerase_III_alpha_NTPase_domain


id: PF07992
description: Pyridine nucleotide-disulphide oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07992
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF07992_Pyridine_nucleotide-disulphide_oxidoreductase


id: PF08124
description: Polysaccharide lyase family 8, N terminal alpha-helical domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08124
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF08124_Polysaccharide_lyase_family_8,_N_terminal_alpha-helical_domain


id: PF08207
description: Elongation factor P (EF-P) KOW-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08207
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF08207_Elongation_factor_P_(EF-P)_KOW-like_domain


id: PF08211
description: Cytidine and deoxycytidylate deaminase zinc-binding region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08211
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF08211_Cytidine_and_deoxycytidylate_deaminase_zinc-binding_region_


id: PF08267
description: Cobalamin-independent synthase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08267
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF08267_Cobalamin-independent_synthase,_N-terminal_domain


id: PF08275
description: DNA primase catalytic core, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08275
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF08275_DNA_primase_catalytic_core,_N-terminal_domain


id: PF08352
description: Oligopeptide/dipeptide transporter, C-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08352
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF08352_Oligopeptide/dipeptide_transporter,_C-terminal_region


id: PF08392
description: FAE1/Type III polyketide synthase-like protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08392
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF08392_FAE1/Type_III_polyketide_synthase-like_protein


id: PF08501
description: Shikimate dehydrogenase substrate binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08501
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF08501_Shikimate_dehydrogenase_substrate_binding_domain


id: PF08540
description: Hydroxymethylglutaryl-coenzyme A synthase C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08540
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF08540_Hydroxymethylglutaryl-coenzyme_A_synthase_C_terminal


id: PF08541
description: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08541
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF08541_3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III_C_terminal__


id: PF08546
description: Ketopantoate reductase PanE/ApbA C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08546
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF08546_Ketopantoate_reductase_PanE/ApbA_C_terminal


id: PF08840
description: BAAT / Acyl-CoA thioester hydrolase C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08840
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF08840_BAAT_/_Acyl-CoA_thioester_hydrolase_C_terminal


id: PF09223
description: ZinT (YodA) periplasmic lipocalin-like zinc-recruitment
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09223
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF09223_ZinT_(YodA)_periplasmic_lipocalin-like_zinc-recruitment


id: PF09439
description: Signal recognition particle receptor beta subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09439
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF09439_Signal_recognition_particle_receptor_beta_subunit


id: PF09529
description: Integral membrane protein (intg_mem_TP0381)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09529
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF09529_Integral_membrane_protein_(intg_mem_TP0381)


id: PF09819
description: ABC-type cobalt transport system, permease component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09819
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF09819_ABC-type_cobalt_transport_system,_permease_component


id: PF09902
description: Uncharacterized protein conserved in bacteria (DUF2129)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09902
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF09902_Uncharacterized_protein_conserved_in_bacteria_(DUF2129)


id: PF09903
description: Uncharacterized protein conserved in bacteria (DUF2130)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09903
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF09903_Uncharacterized_protein_conserved_in_bacteria_(DUF2130)


id: PF09922
description: Cell wall-active antibiotics response 4TMS YvqF
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09922
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF09922_Cell_wall-active_antibiotics_response_4TMS_YvqF


id: PF09960
description: Uncharacterised protein conserved in bacteria (DUF2194)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09960
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF09960_Uncharacterised_protein_conserved_in_bacteria_(DUF2194)


id: PF10035
description: Uncharacterized protein conserved in bacteria (DUF2179)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10035
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF10035_Uncharacterized_protein_conserved_in_bacteria_(DUF2179)


id: PF10066
description: Uncharacterized conserved protein (DUF2304)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10066
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF10066_Uncharacterized_conserved_protein_(DUF2304)


id: PF10096
description: Uncharacterized protein conserved in bacteria (DUF2334)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10096
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF10096_Uncharacterized_protein_conserved_in_bacteria_(DUF2334)


id: PF10110
description: Membrane domain of glycerophosphoryl diester phosphodiesterase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10110
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF10110_Membrane_domain_of_glycerophosphoryl_diester_phosphodiesterase


id: PF10117
description: McrBC 5-methylcytosine restriction system component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10117
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF10117_McrBC_5-methylcytosine_restriction_system_component


id: PF10140
description: WXG100 protein secretion system (Wss), protein YukC
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10140
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF10140_WXG100_protein_secretion_system_(Wss),_protein_YukC


id: PF10141
description: Single-strand DNA-specific exonuclease, C terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10141
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF10141_Single-strand_DNA-specific_exonuclease,_C_terminal_domain


id: PF10385
description: RNA polymerase beta subunit external 1 domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10385
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF10385_RNA_polymerase_beta_subunit_external_1_domain


id: PF10412
description: Type IV secretion-system coupling protein DNA-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10412
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF10412_Type_IV_secretion-system_coupling_protein_DNA-binding_domain


id: PF10418
description: Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10418
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF10418_Iron-sulfur_cluster_binding_domain_of_dihydroorotate_dehydrogenase_B


id: PF10439
description: Bacteriocin class II with double-glycine leader peptide
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10439
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF10439_Bacteriocin_class_II_with_double-glycine_leader_peptide


id: PF10555
description: Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10555
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF10555_Phospho-N-acetylmuramoyl-pentapeptide-transferase_signature_1_


id: PF11490
description: DNA polymerase III polC-type N-terminus II
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11490
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF11490_DNA_polymerase_III_polC-type_N-terminus_II


id: PF12008
description: Type I restriction and modification enzyme - subunit R C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12008
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF12008_Type_I_restriction_and_modification_enzyme_-_subunit_R_C_terminal


id: PF12169
description: DNA polymerase III subunits gamma and tau domain III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12169
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF12169_DNA_polymerase_III_subunits_gamma_and_tau_domain_III


id: PF12399
description: Branched-chain amino acid ATP-binding cassette transporter
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12399
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF12399_Branched-chain_amino_acid_ATP-binding_cassette_transporter


id: PF12535
description: Hydrolase of X-linked nucleoside diphosphate N terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12535
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF12535_Hydrolase_of_X-linked_nucleoside_diphosphate_N_terminal_


id: PF12627
description: Probable RNA and SrmB- binding site of polymerase A
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12627
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF12627_Probable_RNA_and_SrmB-_binding_site_of_polymerase_A


id: PF12822
description: ECF transporter, substrate-specific component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12822
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF12822_ECF_transporter,_substrate-specific_component


id: PF12850
description: Calcineurin-like phosphoesterase superfamily domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12850
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF12850_Calcineurin-like_phosphoesterase_superfamily_domain


id: PF13304
description: AAA domain, putative AbiEii toxin, Type IV TA system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13304
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF13304_AAA_domain,_putative_AbiEii_toxin,_Type_IV_TA_system


id: PF13416
description: Bacterial extracellular solute-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13416
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF13416_Bacterial_extracellular_solute-binding_protein


id: PF13495
description: Phage integrase, N-terminal SAM-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13495
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF13495_Phage_integrase,_N-terminal_SAM-like_domain


id: PF13636
description: RNA-binding PUA-like domain of methyltransferase RsmF
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13636
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF13636_RNA-binding_PUA-like_domain_of_methyltransferase_RsmF


id: PF13653
description: Glycerophosphoryl diester phosphodiesterase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13653
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF13653_Glycerophosphoryl_diester_phosphodiesterase_family


id: PF13669
description: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13669
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF13669_Glyoxalase/Bleomycin_resistance_protein/Dioxygenase_superfamily


id: PF13735
description: tRNA nucleotidyltransferase domain 2 putative
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13735
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF13735_tRNA_nucleotidyltransferase_domain_2_putative


id: PF13738
description: Pyridine nucleotide-disulphide oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13738
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF13738_Pyridine_nucleotide-disulphide_oxidoreductase


id: PF13787
description: Protein of unknown function with HXXEE motif
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13787
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF13787_Protein_of_unknown_function_with_HXXEE_motif


id: PF14028
description: Lantibiotic biosynthesis dehydratase C-term
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14028
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF14028_Lantibiotic_biosynthesis_dehydratase_C-term


id: PF14262
description: Carbohydrate-binding domain-containing protein Cthe_2159
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14262
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF14262_Carbohydrate-binding_domain-containing_protein_Cthe_2159


id: PF14526
description: Integron-associated effector binding protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14526
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF14526_Integron-associated_effector_binding_protein


id: PF14572
description: Phosphoribosyl synthetase-associated domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14572
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF14572_Phosphoribosyl_synthetase-associated_domain


id: PF14602
description: Hexapeptide repeat of succinyl-transferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14602
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF14602_Hexapeptide_repeat_of_succinyl-transferase


id: PF14667
description: Polysaccharide biosynthesis C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14667
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF14667_Polysaccharide_biosynthesis_C-terminal_domain


id: PF14714
description: KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14714
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF14714_KH-domain-like_of_EngA_bacterial_GTPase_enzymes,_C-terminal


id: PF16198
description: tRNA pseudouridylate synthase B C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16198
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF16198_tRNA_pseudouridylate_synthase_B_C-terminal_domain


id: PF16320
description: Ribosomal protein L7/L12 dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16320
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF16320_Ribosomal_protein_L7/L12_dimerisation_domain


id: PF16321
description: Sigma 54 modulation/S30EA ribosomal protein C terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16321
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF16321_Sigma_54_modulation/S30EA_ribosomal_protein_C_terminus


id: PF16592
description: REC lobe of CRISPR-associated endonuclease Cas9
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16592
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF16592_REC_lobe_of_CRISPR-associated_endonuclease_Cas9


id: PF16593
description: Bridge helix of CRISPR-associated endonuclease Cas9
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16593
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF16593_Bridge_helix_of_CRISPR-associated_endonuclease_Cas9


id: PF16595
description: PAM-interacting domain of CRISPR-associated endonuclease Cas9
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16595
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF16595_PAM-interacting_domain_of_CRISPR-associated_endonuclease_Cas9


id: PF16886
description: ATPsynthase alpha/beta subunit N-term extension
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16886
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF16886_ATPsynthase_alpha/beta_subunit_N-term_extension


id: PF16933
description: Putative exopolysaccharide Exporter (EPS-E)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16933
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF16933_Putative_exopolysaccharide_Exporter_(EPS-E)


id: PF17125
description: N-terminal domain of 16S rRNA methyltransferase RsmF
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17125
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF17125_N-terminal_domain_of_16S_rRNA_methyltransferase_RsmF


id: PF17126
description: RsmF rRNA methyltransferase first C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17126
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF17126_RsmF_rRNA_methyltransferase_first_C-terminal_domain


id: PF17440
description: Thiol-activated cytolysin beta sandwich domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17440
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF17440_Thiol-activated_cytolysin_beta_sandwich_domain


id: PF18438
description: Glycosyl hydrolases family 38 C-terminal domain 1
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF18438
name:
  Protein Domains (Pfam).STRING_v12.0_1338_STRINGid_PF18438_Glycosyl_hydrolases_family_38_C-terminal_domain_1


id: SM00046
description: Diacylglycerol kinase catalytic domain (presumed)
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00046
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00046_Diacylglycerol_kinase_catalytic_domain_(presumed)


id: SM00062
description: Bacterial periplasmic substrate-binding proteins
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00062
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00062_Bacterial_periplasmic_substrate-binding_proteins


id: SM00065
description: Domain present in phytochromes and cGMP-specific phosphodiesterases.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00065
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00065_Domain_present_in_phytochromes_and_cGMP-specific_phosphodiesterases.


id: SM00086
description: Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00086
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00086_Motif_C-terminal_to_PAS_motifs_(likely_to_contribute_to_PAS_structural_domain)


id: SM00116
description: Domain in cystathionine beta-synthase and other proteins.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00116
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00116_Domain_in_cystathionine_beta-synthase_and_other_proteins.


id: SM00228
description: Domain present in PSD-95, Dlg, and ZO-1/2.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00228
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00228_Domain_present_in_PSD-95,_Dlg,_and_ZO-1/2.


id: SM00278
description: Helix-hairpin-helix DNA-binding motif class 1
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00278
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00278_Helix-hairpin-helix_DNA-binding_motif_class_1


id: SM00279
description: Helix-hairpin-helix class 2 (Pol1 family) motifs
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00279
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00279_Helix-hairpin-helix_class_2_(Pol1_family)_motifs


id: SM00304
description: HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00304
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00304_HAMP_(Histidine_kinases,_Adenylyl_cyclases,_Methyl_binding_proteins,_Phosphatases)_domain


id: SM00316
description: Ribosomal protein S1-like RNA-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00316
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00316_Ribosomal_protein_S1-like_RNA-binding_domain


id: SM00327
description: Von Willebrand factor (vWF) type A domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00327
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00327_Von_Willebrand_factor_(vWF)_type_A_domain


id: SM00342
description: Helix_turn_helix, arabinose operon control protein
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00342
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00342_Helix_turn_helix,_arabinose_operon_control_protein


id: SM00345
description: Helix_turn_helix gluconate operon transcriptional repressor
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00345
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00345_Helix_turn_helix_gluconate_operon_transcriptional_repressor


id: SM00347
description: Helix_turn_helix multiple antibiotic resistance protein
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00347
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00347_Helix_turn_helix_multiple_antibiotic_resistance_protein


id: SM00354
description: Helix_turn _helix lactose operon repressor
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00354
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00354_Helix_turn__helix_lactose_operon_repressor


id: SM00382
description: ATPases associated with a variety of cellular activities
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00382
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00382_ATPases_associated_with_a_variety_of_cellular_activities


id: SM00418
description: Helix_turn_helix, Arsenical Resistance Operon Repressor
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00418
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00418_Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor


id: SM00420
description: Helix_turn_helix, Deoxyribose operon repressor
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00420
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00420_Helix_turn_helix,_Deoxyribose_operon_repressor


id: SM00436
description: Bacterial DNA topoisomeraes I ATP-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00436
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00436_Bacterial_DNA_topoisomeraes_I_ATP-binding_domain


id: SM00437
description: Bacterial DNA topoisomerase I DNA-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00437
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00437_Bacterial_DNA_topoisomerase_I_DNA-binding_domain


id: SM00471
description: Metal dependent phosphohydrolases with conserved HD motif.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00471
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00471_Metal_dependent_phosphohydrolases_with_conserved_HD_motif.


id: SM00479
description: Exonuclease domain in DNA-polymerase alpha and epsilon chain, ribonuclease T and other exonucleases
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00479
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00479_Exonuclease_domain_in_DNA-polymerase_alpha_and_epsilon_chain,_ribonuclease_T_and_other_exonucleases


id: SM00493
description: Topoisomerases, DnaG-type primases, OLD family nucleases and RecR proteins
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00493
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00493_Topoisomerases,_DnaG-type_primases,_OLD_family_nucleases_and_RecR_proteins


id: SM00529
description: Helix-turn-helix diphteria tox regulatory element
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00529
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00529_Helix-turn-helix_diphteria_tox_regulatory_element


id: SM00530
description: Helix-turn-helix XRE-family like proteins
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00530
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00530_Helix-turn-helix_XRE-family_like_proteins


id: SM00533
description: DNA-binding domain of DNA mismatch repair MUTS family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00533
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00533_DNA-binding_domain_of_DNA_mismatch_repair_MUTS_family


id: SM00534
description: ATPase domain of DNA mismatch repair MUTS family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00534
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00534_ATPase_domain_of_DNA_mismatch_repair_MUTS_family


id: SM00562
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00562
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00562_These_are_enzymes_that_catalyze_nonsubstrate_specific_conversions_of_nucleoside_diphosphates_to_nucleoside_triphosphates._These_enzymes_play_important_roles_in_bacterial_growth,_signal_transduction_and_pathogenicity.

description:
  These are enzymes that catalyze nonsubstrate specific conversions of nucleoside diphosphates to nucleoside triphosphates. These enzymes play important roles in bacterial growth, signal transduction and pathogenicity.


id: SM00698
description: Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00698
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00698_Possible_plasma_membrane-binding_motif_in_junctophilins,_PIP-5-kinases_and_protein_kinases.


id: SM00729
description: Elongator protein 3, MiaB family, Radical SAM
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00729
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00729_Elongator_protein_3,_MiaB_family,_Radical_SAM


id: SM00738
description: In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00738
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00738_In_Spt5p,_this_domain_may_confer_affinity_for_Spt4p._It_possesses_a_RNP-like_fold.


id: SM00760
description: Bacterial dnaA protein helix-turn-helix domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00760
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00760_Bacterial_dnaA_protein_helix-turn-helix_domain


id: SM00839
description: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00839
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00839_Glutamate/Leucine/Phenylalanine/Valine_dehydrogenase


id: SM00840
description: This DALR domain is found in cysteinyl-tRNA-synthetases.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00840
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00840_This_DALR_domain_is_found_in_cysteinyl-tRNA-synthetases.


id: SM00843
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00843
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00843_This_domain_directs_oriented_DNA_translocation_and_forms_a_winged_helix_structure._Mutated_proteins_with_substitutions_in_the_FtsK_gamma_DNA-recognition_helix_are_impaired_in_DNA_binding.

description:
  This domain directs oriented DNA translocation and forms a winged helix structure. Mutated proteins with substitutions in the FtsK gamma DNA-recognition helix are impaired in DNA binding.


id: SM00846
description: Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00846
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00846_Glyceraldehyde_3-phosphate_dehydrogenase,_NAD_binding_domain


id: SM00859
description: Semialdehyde dehydrogenase, NAD binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00859
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00859_Semialdehyde_dehydrogenase,_NAD_binding_domain


id: SM00862
description: Transcriptional regulatory protein, C terminal
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00862
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00862_Transcriptional_regulatory_protein,_C_terminal


id: SM00863
description: Threonyl and Alanyl tRNA synthetase second additional domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00863
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00863_Threonyl_and_Alanyl_tRNA_synthetase_second_additional_domain


id: SM00866
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00866
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00866_The_UbiC_transcription_regulator-associated_(UTRA)_domain_is_a_conserved_ligand-binding_domain_that_has_a_similar_fold_to_PUBMED:12757941._It_is_believed_to_modulate_activity_of_bacterial_transcription_factors_in_response_to_binding_small_molecules.

description:
  The UbiC transcription regulator-associated (UTRA) domain is a conserved ligand-binding domain that has a similar fold to PUBMED:12757941. It is believed to modulate activity of bacterial transcription factors in response to binding small molecules.


id: SM00870
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00870
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00870_Asparaginase,_which_is_found_in_various_plant,_animal_and_bacterial_cells,_catalyses_the_deamination_of_asparagine_to_yield_aspartic_acid_and_an_ammonium_ion,_resulting_in_a_depletion_of_free_circulatory_asparagine_in_plasma_PUBMED:3026924._The_...

description:
  Asparaginase, which is found in various plant, animal and bacterial cells, catalyses the deamination of asparagine to yield aspartic acid and an ammonium ion, resulting in a depletion of free circulatory asparagine in plasma PUBMED:3026924. The ...


id: SM00871
description: Bacterial transcription activator, effector binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00871
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00871_Bacterial_transcription_activator,_effector_binding_domain


id: SM00898
description: Formamidopyrimidine-DNA glycosylase N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00898
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00898_Formamidopyrimidine-DNA_glycosylase_N-terminal_domain


id: SM00899
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00899
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00899_This_entry_represents_the_core_domain_of_the_ferrous_iron_(Fe2+)_transport_protein_FeoA_found_in_bacteria._This_domain_also_occurs_at_the_C-terminus_in_related_proteins._The_transporter_Feo_is_composed_of_three_proteins:_FeoA_a_small,_soluble_...

description:
  This entry represents the core domain of the ferrous iron (Fe2+) transport protein FeoA found in bacteria. This domain also occurs at the C-terminus in related proteins. The transporter Feo is composed of three proteins: FeoA a small, soluble ...


id: SM00930
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00930
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00930_This_domain_is_found_at_the_C-terminus_of_ABC_transporter_proteins_involved_in_D-methionine_transport_as_well_as_a_number_of_ferredoxin-like_proteins._This_domain_is_likely_to_act_as_a_substrate_binding_domain._The_domain_has_been_named_after_a_...

description:
  This domain is found at the C-terminus of ABC transporter proteins involved in D-methionine transport as well as a number of ferredoxin-like proteins. This domain is likely to act as a substrate binding domain. The domain has been named after a ...


id: SM00934
description: Orotidine 5-phosphate decarboxylase / HUMPS family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00934
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00934_Orotidine_5-phosphate_decarboxylase_/_HUMPS_family


id: SM00936
description: Penicillin-binding protein 5, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00936
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00936_Penicillin-binding_protein_5,_C-terminal_domain


id: SM00937
description: This domain is found in peptide chain release factors.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00937
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00937_This_domain_is_found_in_peptide_chain_release_factors.


id: SM00941
description: Pyrimidine nucleoside phosphorylase C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00941
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00941_Pyrimidine_nucleoside_phosphorylase_C-terminal_domain


id: SM00955
description: This domain is the catalytic domain of ribonuclease II.PUBMED:16806266
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00955
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00955_This_domain_is_the_catalytic_domain_of_ribonuclease_II.PUBMED:16806266


id: SM00963
description: SRP54-type protein, helical bundle domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00963
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00963_SRP54-type_protein,_helical_bundle_domain


id: SM00967
description: RNA 2-O ribose methyltransferase substrate binding
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00967
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00967_RNA_2-O_ribose_methyltransferase_substrate_binding


id: SM00981
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00981
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00981_The_THUMP_domain_is_named_after_after_thiouridine_synthases,_methylases_and_PSUSs_PUBMED:11295541._The_THUMP_domain_consists_of_about_110_amino_acid_residues._The_structure_of_ThiI_reveals_that_the_THUMP_has_a_fold_unlike_that_of_previously_...

description:
  The THUMP domain is named after after thiouridine synthases, methylases and PSUSs PUBMED:11295541. The THUMP domain consists of about 110 amino acid residues. The structure of ThiI reveals that the THUMP has a fold unlike that of previously ...


id: SM00982
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00982
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00982_This_domain_is_found_in_proteins_necessary_for_strand-specific_repair_in_DNA_such_as_TRCF_in_Escherichia_coli._A_lesion_in_the_template_strand_blocks_the_RNA_polymerase_complex_(RNAP)._The_RNAP-DNA-RNA_complex_is_specifically_recognised_by_the_...

description:
  This domain is found in proteins necessary for strand-specific repair in DNA such as TRCF in Escherichia coli. A lesion in the template strand blocks the RNA polymerase complex (RNAP). The RNAP-DNA-RNA complex is specifically recognised by the ...


id: SM00983
description: Thiamin pyrophosphokinase, vitamin B1 binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00983
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00983_Thiamin_pyrophosphokinase,_vitamin_B1_binding_domain


id: SM00987
description: UreE urease accessory protein, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00987
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM00987_UreE_urease_accessory_protein,_C-terminal_domain


id: SM01002
description: Alanine dehydrogenase/PNT, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01002
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM01002_Alanine_dehydrogenase/PNT,_C-terminal_domain


id: SM01003
description: Alanine dehydrogenase/PNT, N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01003
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM01003_Alanine_dehydrogenase/PNT,_N-terminal_domain


id: SM01007
description: Class II Aldolase and Adducin N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01007
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM01007_Class_II_Aldolase_and_Adducin_N-terminal_domain


id: SM01022
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01022
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM01022_The_ASCH_domain_adopts_a_beta-barrel_fold_similar_to_that_of_the_PUA_domain._It_is_thought_to_function_as_an_RNA-binding_domain_during_coactivation,_RNA-processing_and_possibly_during_prokaryotic_translation_regulation_PUBMED:16322048.

description:
  The ASCH domain adopts a beta-barrel fold similar to that of the PUA domain. It is thought to function as an RNA-binding domain during coactivation, RNA-processing and possibly during prokaryotic translation regulation PUBMED:16322048.


id: SM01086
description: C-terminal, D2-small domain, of ClpB protein
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01086
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM01086_C-terminal,_D2-small_domain,_of_ClpB_protein


id: SM01096
description: Carbamoyl-phosphate synthetase large chain, oligomerisation domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01096
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM01096_Carbamoyl-phosphate_synthetase_large_chain,_oligomerisation_domain


id: SM01097
description: Carbamoyl-phosphate synthase small chain, CPSase domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01097
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM01097_Carbamoyl-phosphate_synthase_small_chain,_CPSase_domain


id: SM01103
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01103
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM01103_Escherichia_coli_YhbY_is_associated_with_pre-50S_ribosomal_subunits,_which_implies_a_function_in_ribosome_assembly._GFP_fused_to_a_single-domain_CRM_protein_from_maize_localises_to_the_nucleolus,_suggesting_that_an_analogous_activity_may_have_been_...

description:
  Escherichia coli YhbY is associated with pre-50S ribosomal subunits, which implies a function in ribosome assembly. GFP fused to a single-domain CRM protein from maize localises to the nucleolus, suggesting that an analogous activity may have been ...


id: SM01118
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01118
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM01118_These_sequences_are_functionally_identified_as_members_of_the_adenylate_cyclase_family,_which_catalyses_the_conversion_of_ATP_to_3,5-cyclic_AMP_and_pyrophosphate._Six_distinct_non-homologous_classes_of_AC_have_been_identified._The_structure_of_...

description:
  These sequences are functionally identified as members of the adenylate cyclase family, which catalyses the conversion of ATP to 3,5-cyclic AMP and pyrophosphate. Six distinct non-homologous classes of AC have been identified. The structure of ...


id: SM01120
description: This domain is the predicted phosphatase domain of the dihydroxyacetone kinase family.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01120
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM01120_This_domain_is_the_predicted_phosphatase_domain_of_the_dihydroxyacetone_kinase_family.


id: SM01121
description: This is the kinase domain of the dihydroxyacetone kinase family.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01121
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM01121_This_is_the_kinase_domain_of_the_dihydroxyacetone_kinase_family.


id: SM01131
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01131
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM01131_This_domain_is_often_found_adjacent_to_the_DHH_domain_PF01368_and_is_called_DHHA2_for_DHH_associated_domain._This_domain_is_diagnostic_of_DHH_subfamily_2_members_(PUBMED:9478130)._The_domain_is_about_120_residues_long_and_contains_a_conserved_DXK_...

description:
  This domain is often found adjacent to the DHH domain PF01368 and is called DHHA2 for DHH associated domain. This domain is diagnostic of DHH subfamily 2 members (PUBMED:9478130). The domain is about 120 residues long and contains a conserved DXK ...


id: SM01149
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01149
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM01149_This_family_contains_a_number_of_hypothetical_proteins_of_about_450_residues_in_length._Their_function_is_unknown,_and_most_are_bacterial._However,_structurally_this_family_is_part_of_the_6_hairpin_glycosidase_superfamily,_suggesting_a_glycosyl_...

description:
  This family contains a number of hypothetical proteins of about 450 residues in length. Their function is unknown, and most are bacterial. However, structurally this family is part of the 6 hairpin glycosidase superfamily, suggesting a glycosyl ...


id: SM01209
description: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01209
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM01209_Phosphoribosylglycinamide_synthetase,_ATP-grasp_(A)_domain


id: SM01210
description: Phosphoribosylglycinamide synthetase, C domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01210
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM01210_Phosphoribosylglycinamide_synthetase,_C_domain


id: SM01211
description: CobB/CobQ-like glutamine amidotransferase domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01211
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM01211_CobB/CobQ-like_glutamine_amidotransferase_domain


id: SM01232
description: Formamidopyrimidine-DNA glycosylase H2TH domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01232
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM01232_Formamidopyrimidine-DNA_glycosylase_H2TH_domain


id: SM01234
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01234
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM01234_This_domain_has_haemolytic_activity_(PMID:19306042)._It_is_found_in_short_(73-103_amino_acid)_proteins_and_contains_three_conserved_cysteine_residues.

description:
  This domain has haemolytic activity (PMID:19306042). It is found in short (73-103 amino acid) proteins and contains three conserved cysteine residues.


id: SM01245
description: This domain is found at the N-terminus of jag proteins.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01245
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM01245_This_domain_is_found_at_the_N-terminus_of_jag_proteins.


id: SM01340
description: DNA mismatch repair protein, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01340
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM01340_DNA_mismatch_repair_protein,_C-terminal_domain


id: SM01350
description: 6-phosphogluconate dehydrogenase, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01350
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM01350_6-phosphogluconate_dehydrogenase,_C-terminal_domain


id: SM01383
description: Ribosomal Proteins L2, RNA binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01383
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM01383_Ribosomal_Proteins_L2,_RNA_binding_domain


id: SM01390
description: Ribosomal protein S4/S9 N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01390
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM01390_Ribosomal_protein_S4/S9_N-terminal_domain


id: SM01400
description: N-terminal domain of ribose phosphate pyrophosphokinase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01400
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM01400_N-terminal_domain_of_ribose_phosphate_pyrophosphokinase


id: SM01494
description: DDE transposase retroviral integrase sub-family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01494
name:
  Protein Domains (SMART).STRING_v12.0_1338_STRINGid_SM01494_DDE_transposase_retroviral_integrase_sub-family


