# geneInfo

ensembl_gene_id: TMS3_0100005
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 2 subfamily.


ensembl_gene_id: TMS3_0100010
symbol: KFX70365.1
gene_biotype: protein_coding
description:
  Peptidase M23; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100015
symbol: anmK
gene_biotype: protein_coding
description:
  anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.


ensembl_gene_id: TMS3_0100020
symbol: erpA
gene_biotype: protein_coding
description:
  Iron--sulfur cluster insertion protein ErpA; Required for insertion of 4Fe-4S clusters for at least IspG.


ensembl_gene_id: TMS3_0100025
symbol: KFX70368.1
gene_biotype: protein_coding
description:
  Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100030
symbol: KFX70369.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100035
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: TMS3_0100045
symbol: KFX70372.1
gene_biotype: protein_coding
description:
  2-nitropropane dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100055
symbol: KFX70374.1
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: TMS3_0100065
symbol: KFX70376.1
gene_biotype: protein_coding
description:
  Zinc-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100070
symbol: coq7
gene_biotype: protein_coding
description:
  2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.


ensembl_gene_id: TMS3_0100075
symbol: speD
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 2 subfamily.


ensembl_gene_id: TMS3_0100080
symbol: KFX70379.1
gene_biotype: protein_coding
description:
  Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100085
symbol: KFX70380.1
gene_biotype: protein_coding
description:
  Cyclic AMP receptor protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100090
symbol: trpC
gene_biotype: protein_coding
description:
  Indole-3-glycerol-phosphate synthase; Involved in tryptophan biosynthesis; amino acid biosynthesis; converts 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate to C(1)-(3-indolyl)-glycerol 3-phosphate and carbon dioxide and water; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TrpC family.


ensembl_gene_id: TMS3_0100095
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: TMS3_0100100
symbol: KFX70383.1
gene_biotype: protein_coding
description:
  Anthranilate synthase component II; TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100105
symbol: trpE
gene_biotype: protein_coding
description:
  Anthranilate synthase component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...]


ensembl_gene_id: TMS3_0100110
symbol: KFX70385.1
gene_biotype: protein_coding
description:
  Phosphoglycolate phosphatase; Specifically catalyzes the dephosphorylation of 2- phosphoglycolate. Is involved in the dissimilation of the intracellular 2-phosphoglycolate formed during the DNA repair of 3'-phosphoglycolate ends, a major class of DNA lesions induced by oxidative stress. Belongs to the HAD-like hydrolase superfamily. CbbY/CbbZ/Gph/YieH family.


ensembl_gene_id: TMS3_0100115
symbol: KFX70386.1
gene_biotype: protein_coding
description:
  Ribulose-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribulose-phosphate 3-epimerase family.


ensembl_gene_id: TMS3_0100120
symbol: KFX70387.1
gene_biotype: protein_coding
description:
  Hydrolase or acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100125
symbol: KFX70388.1
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100130
symbol: KFX70389.1
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100135
symbol: KFX70390.1
gene_biotype: protein_coding
description:
  Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100140
symbol: KFX70391.1
gene_biotype: protein_coding
description:
  DNA polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100145
symbol: lptD
gene_biotype: protein_coding
description:
  LPS biosynthesis protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.


ensembl_gene_id: TMS3_0100150
symbol: surA
gene_biotype: protein_coding
description:
  Molecular chaperone SurA; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation.


ensembl_gene_id: TMS3_0100155
symbol: pdxA
gene_biotype: protein_coding
description:
  4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).


ensembl_gene_id: TMS3_0100160
symbol: rsmA
gene_biotype: protein_coding
description:
  Ribosomal RNA small subunit methyltransferase A; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: TMS3_0100165
symbol: apaG
gene_biotype: protein_coding
description:
  Magnesium transporter ApaG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100170
symbol: apaH
gene_biotype: protein_coding
description:
  Diadenosine tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.


ensembl_gene_id: TMS3_0100175
symbol: glpE
gene_biotype: protein_coding
description:
  Sulfurtransferase; Catalyzes, although with low efficiency, the sulfur transfer reaction from thiosulfate to cyanide.


ensembl_gene_id: TMS3_0100180
symbol: KFX70399.1
gene_biotype: protein_coding
description:
  Serine/threonine protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100185
symbol: KFX70400.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0229 family.


ensembl_gene_id: TMS3_0100190
symbol: KFX70401.1
gene_biotype: protein_coding
description:
  SpoVR family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100195
symbol: cca
gene_biotype: protein_coding
description:
  2', 3'-cyclic nucleotide 2'-phosphodiesterase; Catalyzes the addition and repair of the essential 3'- terminal CCA sequence in tRNAs without using a nucleic acid template. Adds these three nucleotides in the order of C, C, and A to the tRNA nucleotide-73, using CTP and ATP as substrates and producing inorganic pyrophosphate. Also shows phosphatase, 2'-nucleotidase and 2',3'-cyclic phosphodiesterase activities. These phosphohydrolase activities are probably involved in the repair of the tRNA 3'-CCA terminus degraded by intracellular RNases.


ensembl_gene_id: TMS3_0100200
symbol: KFX70403.1
gene_biotype: protein_coding
description:
  2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100205
symbol: KFX70404.1
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: TMS3_0100210
symbol: plsY
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate acyltransferase; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: TMS3_0100215
symbol: tsaD
gene_biotype: protein_coding
description:
  UGMP family protein; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: TMS3_0100220
symbol: rpsU
gene_biotype: protein_coding
description:
  30S ribosomal protein S21; A small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS21 family.


ensembl_gene_id: TMS3_0100225
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: TMS3_0100230
symbol: rpoD
gene_biotype: protein_coding
description:
  RNA polymerase subunit sigma-70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: TMS3_0100265
symbol: KFX70412.1
gene_biotype: protein_coding
description:
  Phosphatidylinositol kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100270
symbol: KFX70413.1
gene_biotype: protein_coding
description:
  XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100275
symbol: KFX70414.1
gene_biotype: protein_coding
description:
  Nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100290
symbol: KFX70416.1
gene_biotype: protein_coding
description:
  Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100295
symbol: KFX70417.1
gene_biotype: protein_coding
description:
  Multidrug transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100300
symbol: KFX70418.1
gene_biotype: protein_coding
description:
  Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: TMS3_0100305
symbol: KFX70419.1
gene_biotype: protein_coding
description:
  Histidine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100310
symbol: KFX70420.1
gene_biotype: protein_coding
description:
  Response regulator in two-component regulatory system with BaeS; regulator of RNA synthesis, flagellar biosynthesis, chemotaxis and transport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100320
symbol: KFX70422.1
gene_biotype: protein_coding
description:
  Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100330
symbol: KFX70424.1
gene_biotype: protein_coding
description:
  CoA-transferase; CoA transferase having broad substrate specificity for short- chain acyl-CoA thioesters with the activity decreasing when the length of the carboxylic acid chain exceeds four carbons. Belongs to the 3-oxoacid CoA-transferase family.


ensembl_gene_id: TMS3_0100340
symbol: KFX70426.1
gene_biotype: protein_coding
description:
  ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: TMS3_0100345
symbol: KFX70427.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: TMS3_0100350
symbol: KFX70428.1
gene_biotype: protein_coding
description:
  ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100355
symbol: KFX70429.1
gene_biotype: protein_coding
description:
  Agmatinase; Catalyzes the formation of putrescine from agmatine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family.


ensembl_gene_id: TMS3_0100360
symbol: KFX70430.1
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100365
symbol: KFX70431.1
gene_biotype: protein_coding
description:
  LysR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: TMS3_0100370
symbol: KFX70432.1
gene_biotype: protein_coding
description:
  TetR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100375
symbol: KFX70433.1
gene_biotype: protein_coding
description:
  Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100380
symbol: KFX70434.1
gene_biotype: protein_coding
description:
  Phenylacetic acid degradation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100385
symbol: KFX70435.1
gene_biotype: protein_coding
description:
  ACP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100390
symbol: KFX70436.1
gene_biotype: protein_coding
description:
  Kef-type K+ transport system, NAD-binding component; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100395
symbol: KFX70437.1
gene_biotype: protein_coding
description:
  acyl-CoA dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100405
symbol: KFX70439.1
gene_biotype: protein_coding
description:
  Diguanylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100425
symbol: bioD
gene_biotype: protein_coding
description:
  Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: TMS3_0100430
symbol: bioC
gene_biotype: protein_coding
description:
  malonyl-CoA O-methyltransferase; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway.


ensembl_gene_id: TMS3_0100440
symbol: bioF
gene_biotype: protein_coding
description:
  8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.


ensembl_gene_id: TMS3_0100445
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: TMS3_0100450
symbol: KFX70448.1
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100455
symbol: KFX70449.1
gene_biotype: protein_coding
description:
  ModE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100465
symbol: KFX70451.1
gene_biotype: protein_coding
description:
  Molybdenum ABC transporter permease; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: TMS3_0100470
symbol: srkA
gene_biotype: protein_coding
description:
  Serine/threonine protein kinase; A protein kinase that phosphorylates Ser and Thr residues. Probably acts to suppress the effects of stress linked to accumulation of reactive oxygen species. Probably involved in the extracytoplasmic stress response.


ensembl_gene_id: TMS3_0100475
symbol: KFX70453.1
gene_biotype: protein_coding
description:
  Chloramphenical resistance permease RarD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100480
symbol: KFX70454.1
gene_biotype: protein_coding
description:
  Glycine cleavage system protein R; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100485
symbol: KFX70455.1
gene_biotype: protein_coding
description:
  GCN5 family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100490
symbol: glcB
gene_biotype: protein_coding
description:
  Malate synthase; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily.


ensembl_gene_id: TMS3_0100495
symbol: KFX70457.1
gene_biotype: protein_coding
description:
  Cyclic nucleotide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100500
symbol: KFX70458.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit epsilon; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100505
symbol: KFX70459.1
gene_biotype: protein_coding
description:
  Sodium:solute symporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: TMS3_0100515
symbol: KFX70461.1
gene_biotype: protein_coding
description:
  Lyase; Inactivates the type B streptogramin antibiotics by linearizing the lactone ring at the ester linkage, generating a free phenylglycine carboxylate and converting the threonyl moiety into 2- amino-butenoic acid.


ensembl_gene_id: TMS3_0100520
symbol: KFX70462.1
gene_biotype: protein_coding
description:
  Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100550
symbol: KFX70468.1
gene_biotype: protein_coding
description:
  Damage-inducible protein DinB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100565
symbol: KFX70471.1
gene_biotype: protein_coding
description:
  Histidine kinase; Part of a two-component regulatory system with CreB or PhoB; involved in catabolic regulation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100570
symbol: KFX70472.1
gene_biotype: protein_coding
description:
  Response regulator in two-component regulatory system with CreC; CreB protein is phosphorylated by sensor protein phospho-CreC; involved in catabolic regulation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100575
symbol: KFX70473.1
gene_biotype: protein_coding
description:
  Chemotaxis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100580
symbol: KFX70474.1
gene_biotype: protein_coding
description:
  ATP-dependent zinc protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100590
symbol: KFX70476.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CoA-transferase III family.


ensembl_gene_id: TMS3_0100595
symbol: KFX70477.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: TMS3_0100600
symbol: KFX70478.1
gene_biotype: protein_coding
description:
  Choline transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BCCT transporter (TC 2.A.15) family.


ensembl_gene_id: TMS3_0100610
symbol: KFX70479.1
gene_biotype: protein_coding
description:
  Gamma-butyrobetaine dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100615
symbol: KFX70480.1
gene_biotype: protein_coding
description:
  4-hydroxybenzoyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100620
symbol: lcdH
gene_biotype: protein_coding
description:
  3-hydroxybutyryl-CoA dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine.


ensembl_gene_id: TMS3_0100625
symbol: KFX70482.1
gene_biotype: protein_coding
description:
  NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100630
symbol: KFX70483.1
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100640
symbol: KFX70484.1
gene_biotype: protein_coding
description:
  AraC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100650
symbol: purU
gene_biotype: protein_coding
description:
  Formyltetrahydrofolate deformylase; Catalyzes the hydrolysis of 10-formyltetrahydrofolate (formyl-FH4) to formate and tetrahydrofolate (FH4).


ensembl_gene_id: TMS3_0100655
symbol: KFX70486.1
gene_biotype: protein_coding
description:
  Sarcosine oxidase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100660
symbol: KFX70487.1
gene_biotype: protein_coding
description:
  Sarcosine oxidase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.


ensembl_gene_id: TMS3_0100665
symbol: KFX70488.1
gene_biotype: protein_coding
description:
  Sarcosine oxidase subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100670
symbol: KFX70489.1
gene_biotype: protein_coding
description:
  Sarcosine oxidase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100710
symbol: KFX70494.1
gene_biotype: protein_coding
description:
  Creatininase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100720
symbol: KFX70496.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: TMS3_0100725
symbol: KFX70497.1
gene_biotype: protein_coding
description:
  Polyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100730
symbol: KFX70498.1
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100735
symbol: KFX70499.1
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100740
symbol: KFX70500.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.


ensembl_gene_id: TMS3_0100760
symbol: KFX70503.1
gene_biotype: protein_coding
description:
  Threonine aldolase; Catalyzes the cleavage of L-allo-threonine and L-threonine to glycine and acetaldehyde.


ensembl_gene_id: TMS3_0100775
symbol: KFX70506.1
gene_biotype: protein_coding
description:
  Sulfite oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100780
symbol: KFX70507.1
gene_biotype: protein_coding
description:
  Sulfide dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100785
symbol: fusA
gene_biotype: protein_coding
description:
  Elongation factor G; EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100795
symbol: KFX70510.1
gene_biotype: protein_coding
description:
  Aldehyde-activating protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100805
symbol: KFX70512.1
gene_biotype: protein_coding
description:
  Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100815
symbol: KFX70513.1
gene_biotype: protein_coding
description:
  Enterotoxin (HBL); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100820
symbol: KFX70514.1
gene_biotype: protein_coding
description:
  Uracil permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100835
symbol: KFX70517.1
gene_biotype: protein_coding
description:
  Ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100840
symbol: KFX70518.1
gene_biotype: protein_coding
description:
  Rieske (2Fe-2S) protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100845
symbol: KFX70519.1
gene_biotype: protein_coding
description:
  Peptidase M19; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100850
symbol: KFX70520.1
gene_biotype: protein_coding
description:
  Hydrocarbon binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100855
symbol: KFX70521.1
gene_biotype: protein_coding
description:
  N-methylproline demethylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100860
symbol: KFX70522.1
gene_biotype: protein_coding
description:
  (Fe-S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100865
symbol: KFX70523.1
gene_biotype: protein_coding
description:
  Electron transfer flavoprotein subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100870
symbol: KFX70524.1
gene_biotype: protein_coding
description:
  Electron transfer flavoprotein subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100885
symbol: KFX70527.1
gene_biotype: protein_coding
description:
  Serine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron-sulfur dependent L-serine dehydratase family.


ensembl_gene_id: TMS3_0100895
symbol: KFX70529.1
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100900
symbol: KFX70530.1
gene_biotype: protein_coding
description:
  Choline ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100920
symbol: betB
gene_biotype: protein_coding
description:
  Betaine-aldehyde dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid.


ensembl_gene_id: TMS3_0100925
symbol: betA
gene_biotype: protein_coding
description:
  Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.


ensembl_gene_id: TMS3_0100930
symbol: KFX70536.1
gene_biotype: protein_coding
description:
  Peptidase C69; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100935
symbol: KFX70537.1
gene_biotype: protein_coding
description:
  Zn-dependent protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100945
symbol: KFX70539.1
gene_biotype: protein_coding
description:
  RNA helicase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DEAD box helicase family.


ensembl_gene_id: TMS3_0100955
symbol: KFX70541.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100965
symbol: KFX70543.1
gene_biotype: protein_coding
description:
  RNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100970
symbol: KFX70544.1
gene_biotype: protein_coding
description:
  Appr-1-p processing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100980
symbol: KFX70546.1
gene_biotype: protein_coding
description:
  Citrate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100985
symbol: KFX70547.1
gene_biotype: protein_coding
description:
  Intradiol ring-cleavage dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0100990
symbol: KFX70548.1
gene_biotype: protein_coding
description:
  Alanine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AlaDH/PNT family.


ensembl_gene_id: TMS3_0101015
symbol: KFX70552.1
gene_biotype: protein_coding
description:
  YccS/YhfK family integral membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101020
symbol: KFX70553.1
gene_biotype: protein_coding
description:
  Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101030
symbol: KFX70555.1
gene_biotype: protein_coding
description:
  Elongation factor GreAB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101040
symbol: KFX70557.1
gene_biotype: protein_coding
description:
  Metal-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101050
symbol: KFX70559.1
gene_biotype: protein_coding
description:
  Fructose-1,6-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis.


ensembl_gene_id: TMS3_0101055
symbol: KFX70560.1
gene_biotype: protein_coding
description:
  Lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101065
symbol: pgk
gene_biotype: protein_coding
description:
  Phosphoglycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate kinase family.


ensembl_gene_id: TMS3_0101070
symbol: gapA
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase; Catalyzes the NAD-dependent conversion of D-erythrose 4- phosphate to 4-phosphoerythronate.


ensembl_gene_id: TMS3_0101075
symbol: KFX70564.1
gene_biotype: protein_coding
description:
  Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.


ensembl_gene_id: TMS3_0101085
symbol: metK
gene_biotype: protein_coding
description:
  S-adenosylmethionine synthetase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: TMS3_0101105
symbol: KFX70568.1
gene_biotype: protein_coding
description:
  Allantoate amidohydrolase and N-carbamoyl-L-amino acid amidohydrolase are very similar; the allantoate amidohydrolase from Escherichia coli forms a dimer and binds zinc ions for catalytic activity and catalyzes the conversion of allantoate to (S)-ureidoglycolate and ammonia; carbamoyl amidohydrolase from Bacillus sp. converts N-carbamoyl amino acids to amino acids, ammonia, and carbon dioxide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101110
symbol: KFX70569.1
gene_biotype: protein_coding
description:
  Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101115
symbol: KFX70570.1
gene_biotype: protein_coding
description:
  Phenylhydantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101120
symbol: KFX70571.1
gene_biotype: protein_coding
description:
  Dihydropyrimidine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101125
symbol: KFX70572.1
gene_biotype: protein_coding
description:
  Dihydropyrimidine dehydrogenase; NADH-dependent; catalyzes the conversion of pyrimidines to 5,6-dihydro compounds in pyrimidine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101135
symbol: ahcY
gene_biotype: protein_coding
description:
  Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine.


ensembl_gene_id: TMS3_0101140
symbol: KFX70575.1
gene_biotype: protein_coding
description:
  5,10-methylenetetrahydrofolate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: TMS3_0101145
symbol: KFX70576.1
gene_biotype: protein_coding
description:
  LOG family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101170
symbol: KFX70581.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101175
symbol: KFX70582.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101185
symbol: KFX70583.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.


ensembl_gene_id: TMS3_0101190
symbol: cheD
gene_biotype: protein_coding
description:
  Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: TMS3_0101195
symbol: cheB
gene_biotype: protein_coding
description:
  Chemotaxis protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: TMS3_0101200
symbol: rhlE
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.


ensembl_gene_id: TMS3_0101210
symbol: KFX70588.1
gene_biotype: protein_coding
description:
  Cytochrome B561; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101215
symbol: bioA
gene_biotype: protein_coding
description:
  Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.


ensembl_gene_id: TMS3_0101220
symbol: KFX70590.1
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: TMS3_0101225
symbol: KFX70591.1
gene_biotype: protein_coding
description:
  Sodium:alanine symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101235
symbol: KFX70593.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101245
symbol: KFX70595.1
gene_biotype: protein_coding
description:
  Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101255
symbol: KFX70597.1
gene_biotype: protein_coding
description:
  Protein PilI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101260
symbol: KFX70598.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheY; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101265
symbol: KFX70599.1
gene_biotype: protein_coding
description:
  Pilus assembly protein PilG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101270
symbol: gshB
gene_biotype: protein_coding
description:
  Glutathione synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic GSH synthase family.


ensembl_gene_id: TMS3_0101275
symbol: KFX70601.1
gene_biotype: protein_coding
description:
  Energy transducer TonB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101280
symbol: KFX70602.1
gene_biotype: protein_coding
description:
  Protein AlgH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0301 (AlgH) family.


ensembl_gene_id: TMS3_0101285
symbol: KFX70603.1
gene_biotype: protein_coding
description:
  Holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: TMS3_0101290
symbol: KFX70604.1
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101295
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase catalytic subunit; Catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: TMS3_0101300
symbol: KFX70606.1
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101310
symbol: KFX70608.1
gene_biotype: protein_coding
description:
  Twitching motility protein PilT; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101320
symbol: KFX70610.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: TMS3_0101325
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: TMS3_0101340
symbol: metX
gene_biotype: protein_coding
description:
  Homoserine acetyltransferase; Transfers a succinyl group from succinyl-CoA to L-homoserine, forming succinyl-L-homoserine.


ensembl_gene_id: TMS3_0101345
symbol: KFX70615.1
gene_biotype: protein_coding
description:
  Methionine biosynthesis protein MetW; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101350
symbol: KFX70616.1
gene_biotype: protein_coding
description:
  Homoserine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101355
symbol: KFX70617.1
gene_biotype: protein_coding
description:
  Nucleoside-triphosphate diphosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: TMS3_0101360
symbol: KFX70618.1
gene_biotype: protein_coding
description:
  Oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: TMS3_0101400
symbol: KFX70625.1
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101410
symbol: KFX70627.1
gene_biotype: protein_coding
description:
  BCCT transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BCCT transporter (TC 2.A.15) family.


ensembl_gene_id: TMS3_0101415
symbol: KFX70628.1
gene_biotype: protein_coding
description:
  Endoribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101425
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N7)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: TMS3_0101430
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: TMS3_0101435
symbol: KFX70632.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiS; With ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101450
symbol: mtgA
gene_biotype: protein_coding
description:
  Peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.


ensembl_gene_id: TMS3_0101460
symbol: rpoH
gene_biotype: protein_coding
description:
  RNA polymerase sigma 70; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.


ensembl_gene_id: TMS3_0101465
symbol: KFX70638.1
gene_biotype: protein_coding
description:
  Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: TMS3_0101475
symbol: ftsY
gene_biotype: protein_coding
description:
  Cell division protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.


ensembl_gene_id: TMS3_0101480
symbol: KFX70641.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: TMS3_0101525
symbol: KFX70650.1
gene_biotype: protein_coding
description:
  Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101535
symbol: rsmD
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle; Belongs to the methyltransferase superfamily. RsmD family.


ensembl_gene_id: TMS3_0101550
symbol: KFX70655.1
gene_biotype: protein_coding
description:
  Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101560
symbol: KFX70657.1
gene_biotype: protein_coding
description:
  Sugar transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101570
symbol: KFX70659.1
gene_biotype: protein_coding
description:
  Biofilm formation protein PelB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101575
symbol: KFX70660.1
gene_biotype: protein_coding
description:
  PbsX family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101585
symbol: KFX70662.1
gene_biotype: protein_coding
description:
  Coniferyl aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: TMS3_0101590
symbol: KFX70663.1
gene_biotype: protein_coding
description:
  Twin-arginine translocation pathway signal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101595
symbol: KFX70664.1
gene_biotype: protein_coding
description:
  GMC family oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101600
symbol: KFX70665.1
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101605
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: TMS3_0101615
symbol: KFX70668.1
gene_biotype: protein_coding
description:
  Gamma-glutamyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101625
symbol: mutM
gene_biotype: protein_coding
description:
  5-hydroxymethyluracil DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: TMS3_0101635
symbol: KFX70672.1
gene_biotype: protein_coding
description:
  SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101640
symbol: glnQ
gene_biotype: protein_coding
description:
  Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101645
symbol: KFX70674.1
gene_biotype: protein_coding
description:
  Amino acid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101650
symbol: KFX70675.1
gene_biotype: protein_coding
description:
  ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101660
symbol: KFX70677.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: TMS3_0101665
symbol: KFX70678.1
gene_biotype: protein_coding
description:
  RpiR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101670
symbol: KFX70679.1
gene_biotype: protein_coding
description:
  Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LDH2/MDH2 oxidoreductase family.


ensembl_gene_id: TMS3_0101675
symbol: potA
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter ATPase; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: TMS3_0101695
symbol: ilvD
gene_biotype: protein_coding
description:
  Dihydroxy-acid dehydratase; Catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IlvD/Edd family.


ensembl_gene_id: TMS3_0101705
symbol: KFX70685.1
gene_biotype: protein_coding
description:
  Diacylglycerol kinase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: TMS3_0101715
symbol: KFX70687.1
gene_biotype: protein_coding
description:
  GTPase SAR1; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101725
symbol: thyA
gene_biotype: protein_coding
description:
  Thymidylate synthase; Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor and reductant in the reaction, yielding dihydrofolate (DHF) as a by- product. This enzymatic reaction provides an intracellular de novo source of dTMP, an essential precursor for DNA biosynthesis.


ensembl_gene_id: TMS3_0101730
symbol: lgt
gene_biotype: protein_coding
description:
  Prolipoprotein diacylglyceryl transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: TMS3_0101745
symbol: KFX70693.1
gene_biotype: protein_coding
description:
  Signal peptide protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101750
symbol: KFX70694.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate-protein phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: TMS3_0101755
symbol: rppH
gene_biotype: protein_coding
description:
  RNA pyrophosphohydrolase; Accelerates the degradation of transcripts by removing pyrophosphate from the 5'-end of triphosphorylated RNA, leading to a more labile monophosphorylated state that can stimulate subsequent ribonuclease cleavage; Belongs to the Nudix hydrolase family. RppH subfamily.


ensembl_gene_id: TMS3_0101760
symbol: KFX70696.1
gene_biotype: protein_coding
description:
  Phosphoserine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101770
symbol: ilvA
gene_biotype: protein_coding
description:
  Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: TMS3_0101775
symbol: rpiA
gene_biotype: protein_coding
description:
  Ribose 5-phosphate isomerase; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.


ensembl_gene_id: TMS3_0101780
symbol: KFX70700.1
gene_biotype: protein_coding
description:
  DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101795
symbol: KFX70702.1
gene_biotype: protein_coding
description:
  FAD-linked oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101800
symbol: KFX70703.1
gene_biotype: protein_coding
description:
  3-phosphoglycerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: TMS3_0101805
symbol: KFX70704.1
gene_biotype: protein_coding
description:
  Purine nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101810
symbol: KFX70705.1
gene_biotype: protein_coding
description:
  2OG-Fe(II) oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101825
symbol: KFX70708.1
gene_biotype: protein_coding
description:
  Thiol-disulfide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101830
symbol: KFX70709.1
gene_biotype: protein_coding
description:
  Penicillin amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101835
symbol: KFX70710.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101840
symbol: KFX70711.1
gene_biotype: protein_coding
description:
  DNA topoisomerase III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101845
symbol: KFX70712.1
gene_biotype: protein_coding
description:
  Alanine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101865
symbol: potA-2
gene_biotype: protein_coding
description:
  Transporter; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: TMS3_0101880
symbol: KFX70719.1
gene_biotype: protein_coding
description:
  Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: TMS3_0101885
symbol: KFX70720.1
gene_biotype: protein_coding
description:
  Glutamine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family.


ensembl_gene_id: TMS3_0101890
symbol: KFX70721.1
gene_biotype: protein_coding
description:
  Gamma-glutamyl-gamma-aminobutyrate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101895
symbol: KFX70722.1
gene_biotype: protein_coding
description:
  Gamma-glutamylputrescine synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family.


ensembl_gene_id: TMS3_0101910
symbol: KFX70725.1
gene_biotype: protein_coding
description:
  Carbon-nitrogen hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101915
symbol: aguA
gene_biotype: protein_coding
description:
  Agmatine deiminase; Mediates the hydrolysis of agmatine into N- carbamoylputrescine in the arginine decarboxylase (ADC) pathway of putrescine biosynthesis, a basic polyamine.


ensembl_gene_id: TMS3_0101920
symbol: KFX70727.1
gene_biotype: protein_coding
description:
  Sulfate:proton symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101925
symbol: KFX70728.1
gene_biotype: protein_coding
description:
  Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101935
symbol: KFX70730.1
gene_biotype: protein_coding
description:
  YeeE/YedE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101940
symbol: KFX70731.1
gene_biotype: protein_coding
description:
  ArsR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0101960
symbol: KFX70734.1
gene_biotype: protein_coding
description:
  Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102010
symbol: KFX70741.1
gene_biotype: protein_coding
description:
  Chromate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102030
symbol: KFX70745.1
gene_biotype: protein_coding
description:
  Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102035
symbol: KFX70746.1
gene_biotype: protein_coding
description:
  FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102050
symbol: KFX70749.1
gene_biotype: protein_coding
description:
  Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102060
symbol: KFX70750.1
gene_biotype: protein_coding
description:
  Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family.


ensembl_gene_id: TMS3_0102070
symbol: KFX70752.1
gene_biotype: protein_coding
description:
  Alkyl hydroperoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102080
symbol: KFX70754.1
gene_biotype: protein_coding
description:
  Fe-S oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102100
symbol: gabD
gene_biotype: protein_coding
description:
  Succinate-semialdehyde dehydrogenase; Catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102110
symbol: KFX70758.1
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102115
symbol: KFX70759.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102120
symbol: hmp
gene_biotype: protein_coding
description:
  Dihydropteridine reductase; Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress; Belongs to the globin family. Two-domain flavohemoproteins subfamily.


ensembl_gene_id: TMS3_0102125
symbol: KFX70761.1
gene_biotype: protein_coding
description:
  Transmembrane sensor/regulator PpyR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102130
symbol: KFX70762.1
gene_biotype: protein_coding
description:
  Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102135
symbol: KFX70763.1
gene_biotype: protein_coding
description:
  CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CoA-transferase III family.


ensembl_gene_id: TMS3_0102155
symbol: KFX70766.1
gene_biotype: protein_coding
description:
  NADP transhydrogenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102160
symbol: KFX70767.1
gene_biotype: protein_coding
description:
  NAD(P) transhydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102165
symbol: KFX70768.1
gene_biotype: protein_coding
description:
  NAD synthetase; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.


ensembl_gene_id: TMS3_0102175
symbol: KFX70770.1
gene_biotype: protein_coding
description:
  Holliday junction resolvasome, helicase subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102205
symbol: recD
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V subunit alpha; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and re [...]


ensembl_gene_id: TMS3_0102210
symbol: recB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V subunit beta; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and rep [...]


ensembl_gene_id: TMS3_0102215
symbol: recC
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V subunit gamma; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and re [...]


ensembl_gene_id: TMS3_0102230
symbol: KFX70780.1
gene_biotype: protein_coding
description:
  NAD(P)H nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102240
symbol: KFX70782.1
gene_biotype: protein_coding
description:
  MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102245
symbol: KFX70783.1
gene_biotype: protein_coding
description:
  C4-dicarboxylate ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102250
symbol: KFX70784.1
gene_biotype: protein_coding
description:
  C4-dicarboxylate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102305
symbol: KFX70794.1
gene_biotype: protein_coding
description:
  N-acetylmuramoyl-L-alanine amidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102315
symbol: KFX70796.1
gene_biotype: protein_coding
description:
  DASH family cryptochrome; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA photolyase family.


ensembl_gene_id: TMS3_0102325
symbol: KFX70798.1
gene_biotype: protein_coding
description:
  Endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102330
symbol: KFX70799.1
gene_biotype: protein_coding
description:
  Thiol:disulfide interchange protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102340
symbol: KFX70801.1
gene_biotype: protein_coding
description:
  Cytochrome; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102345
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: TMS3_0102350
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.


ensembl_gene_id: TMS3_0102360
symbol: thrB
gene_biotype: protein_coding
description:
  Serine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudomonas-type ThrB family.


ensembl_gene_id: TMS3_0102365
symbol: KFX70806.1
gene_biotype: protein_coding
description:
  NAD/FAD-utilizing enzyme apparently involved in cell division; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102370
symbol: KFX70807.1
gene_biotype: protein_coding
description:
  Cytochrome C oxidase subunit IV; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102375
symbol: KFX70808.1
gene_biotype: protein_coding
description:
  Bb3-type cytochrome oxidase subunit IV; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102380
symbol: KFX70809.1
gene_biotype: protein_coding
description:
  Cytochrome C oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102385
symbol: KFX70810.1
gene_biotype: protein_coding
description:
  Cytochrome C oxidase; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.


ensembl_gene_id: TMS3_0102390
symbol: KFX70811.1
gene_biotype: protein_coding
description:
  Cytochrome B558 subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102400
symbol: KFX70813.1
gene_biotype: protein_coding
description:
  Fur family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family.


ensembl_gene_id: TMS3_0102405
symbol: znuC
gene_biotype: protein_coding
description:
  Zinc ABC transporter ATP-binding protein; Part of the ABC transporter complex ZnuABC involved in zinc import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Zinc importer (TC 3.A.1.15.5) family.


ensembl_gene_id: TMS3_0102420
symbol: metN
gene_biotype: protein_coding
description:
  Methionine ABC transporter ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: TMS3_0102425
symbol: KFX70818.1
gene_biotype: protein_coding
description:
  Metal ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102430
symbol: KFX70819.1
gene_biotype: protein_coding
description:
  Methionine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102440
symbol: KFX70821.1
gene_biotype: protein_coding
description:
  Glyoxalase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102445
symbol: KFX70822.1
gene_biotype: protein_coding
description:
  Copper-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102450
symbol: cyoE
gene_biotype: protein_coding
description:
  Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.


ensembl_gene_id: TMS3_0102465
symbol: KFX70826.1
gene_biotype: protein_coding
description:
  Cytochrome oxidase biogenesis protein Surf1,facilitates heme A insertion; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102470
symbol: KFX70827.1
gene_biotype: protein_coding
description:
  Major facilitator superfamily permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102475
symbol: KFX70828.1
gene_biotype: protein_coding
description:
  MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102480
symbol: KFX70829.1
gene_biotype: protein_coding
description:
  Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102485
symbol: KFX70830.1
gene_biotype: protein_coding
description:
  Cytochrome oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1-3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B.


ensembl_gene_id: TMS3_0102490
symbol: KFX70831.1
gene_biotype: protein_coding
description:
  Cytochrome B559 subunit alpha; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B).


ensembl_gene_id: TMS3_0102500
symbol: KFX70833.1
gene_biotype: protein_coding
description:
  Carbonate dehydratase; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.


ensembl_gene_id: TMS3_0102510
symbol: KFX70834.1
gene_biotype: protein_coding
description:
  Maltoporin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102515
symbol: pgi
gene_biotype: protein_coding
description:
  Glucose-6-phosphate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GPI family.


ensembl_gene_id: TMS3_0102520
symbol: KFX70836.1
gene_biotype: protein_coding
description:
  Fructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102525
symbol: xylB
gene_biotype: protein_coding
description:
  Xylulose kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102530
symbol: KFX70838.1
gene_biotype: protein_coding
description:
  Mannitol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mannitol dehydrogenase family.


ensembl_gene_id: TMS3_0102540
symbol: KFX70840.1
gene_biotype: protein_coding
description:
  Mannitol ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102545
symbol: KFX70841.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102550
symbol: KFX70842.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102560
symbol: KFX70844.1
gene_biotype: protein_coding
description:
  Radical SAM protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102565
symbol: KFX70845.1
gene_biotype: protein_coding
description:
  3-demethylubiquinone-9 3-methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102580
symbol: KFX70848.1
gene_biotype: protein_coding
description:
  Anhydrase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102585
symbol: KFX70849.1
gene_biotype: protein_coding
description:
  HAD family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102595
symbol: KFX70851.1
gene_biotype: protein_coding
description:
  Aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102605
symbol: KFX70853.1
gene_biotype: protein_coding
description:
  Sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102610
symbol: KFX70854.1
gene_biotype: protein_coding
description:
  Peroxiredoxin OsmC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102620
symbol: KFX70856.1
gene_biotype: protein_coding
description:
  Dodecin flavoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102630
symbol: trpB
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: TMS3_0102635
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase subunit alpha; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: TMS3_0102655
symbol: KFX70862.1
gene_biotype: protein_coding
description:
  Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily.


ensembl_gene_id: TMS3_0102660
symbol: KFX70863.1
gene_biotype: protein_coding
description:
  FAD-binding oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102665
symbol: KFX70864.1
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102670
symbol: KFX70865.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine endopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family.


ensembl_gene_id: TMS3_0102680
symbol: KFX70867.1
gene_biotype: protein_coding
description:
  Choline-sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102690
symbol: KFX70869.1
gene_biotype: protein_coding
description:
  SulP family inorganic anion transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102705
symbol: KFX70872.1
gene_biotype: protein_coding
description:
  Phospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102710
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: TMS3_0102715
symbol: hemF
gene_biotype: protein_coding
description:
  Coproporphyrinogen III oxidase; Involved in the heme biosynthesis. Catalyzes the aerobic oxidative decarboxylation of propionate groups of rings A and B of coproporphyrinogen-III to yield the vinyl groups in protoporphyrinogen- IX.


ensembl_gene_id: TMS3_0102720
symbol: KFX70875.1
gene_biotype: protein_coding
description:
  Quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102725
symbol: tsaC
gene_biotype: protein_coding
description:
  tRNA threonylcarbamoyladenosine biosynthesis protein RimN; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Catalyzes the conversion of L-threonine, HCO(3)(-)/CO(2) and ATP to give threonylcarbamoyl-AMP (TC-AMP) as the acyladenylate intermediate, with the release of diphosphate.


ensembl_gene_id: TMS3_0102730
symbol: KFX70877.1
gene_biotype: protein_coding
description:
  DNA processing protein DprA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102735
symbol: KFX70878.1
gene_biotype: protein_coding
description:
  Peptidoglycan-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102740
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: TMS3_0102745
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: TMS3_0102750
symbol: KFX70881.1
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: TMS3_0102755
symbol: trkA
gene_biotype: protein_coding
description:
  Involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102760
symbol: KFX70883.1
gene_biotype: protein_coding
description:
  TPR repeat-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102765
symbol: KFX70884.1
gene_biotype: protein_coding
description:
  Pilus assembly protein PilZ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102770
symbol: KFX70885.1
gene_biotype: protein_coding
description:
  Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102775
symbol: KFX70886.1
gene_biotype: protein_coding
description:
  3-methyladenine DNA glycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102785
symbol: glyS
gene_biotype: protein_coding
description:
  glycine-tRNA synthetase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102790
symbol: KFX70888.1
gene_biotype: protein_coding
description:
  Histidinol phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102795
symbol: KFX70889.1
gene_biotype: protein_coding
description:
  Glycerol acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102800
symbol: KFX70890.1
gene_biotype: protein_coding
description:
  Choline transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102805
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: TMS3_0102810
symbol: recF
gene_biotype: protein_coding
description:
  Recombinase RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: TMS3_0102815
symbol: KFX70893.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of  [...]


ensembl_gene_id: TMS3_0102820
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: TMS3_0102825
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: TMS3_0102830
symbol: yidC
gene_biotype: protein_coding
description:
  Membrane protein insertase; Required for the insertion and/or proper folding and/or complex formation of integral membrane proteins into the membrane. Involved in integration of membrane proteins that insert both dependently and independently of the Sec translocase complex, as well as at least some lipoproteins. Aids folding of multispanning membrane proteins.


ensembl_gene_id: TMS3_0102835
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase MnmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: TMS3_0102840
symbol: gidA
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification protein; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: TMS3_0102845
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.


ensembl_gene_id: TMS3_0102850
symbol: KFX70900.1
gene_biotype: protein_coding
description:
  Chromosome partitioning protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102855
symbol: KFX70901.1
gene_biotype: protein_coding
description:
  Chromosome partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family.


ensembl_gene_id: TMS3_0102860
symbol: KFX70902.1
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102865
symbol: atpB
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit A; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: TMS3_0102870
symbol: atpE
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit C; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: TMS3_0102875
symbol: atpF
gene_biotype: protein_coding
description:
  ATP synthase subunit B; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: TMS3_0102880
symbol: atpH
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: TMS3_0102885
symbol: atpA
gene_biotype: protein_coding
description:
  ATP F0F1 synthase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: TMS3_0102890
symbol: atpG
gene_biotype: protein_coding
description:
  ATP F0F1 synthase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: TMS3_0102895
symbol: atpD
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: TMS3_0102900
symbol: atpC
gene_biotype: protein_coding
description:
  ATP synthase F0F1 subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: TMS3_0102905
symbol: glmU
gene_biotype: protein_coding
description:
  Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: TMS3_0102915
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: TMS3_0102925
symbol: KFX70915.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0276 family.


ensembl_gene_id: TMS3_0102930
symbol: KFX70916.1
gene_biotype: protein_coding
description:
  Cardiolipin synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102935
symbol: KFX70917.1
gene_biotype: protein_coding
description:
  Fatty acid methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102940
symbol: KFX70918.1
gene_biotype: protein_coding
description:
  Lysine transporter LysE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102950
symbol: KFX70920.1
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein CcmE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0102980
symbol: clsA
gene_biotype: protein_coding
description:
  Cardiolipin synthetase; Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol.


ensembl_gene_id: TMS3_0102990
symbol: KFX70928.1
gene_biotype: protein_coding
description:
  3'-5' exonuclease of DNA polymerase III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103000
symbol: KFX70930.1
gene_biotype: protein_coding
description:
  4-hydroxytetrahydrobiopterin dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103010
symbol: KFX70932.1
gene_biotype: protein_coding
description:
  NADH:ubiquinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103015
symbol: KFX70933.1
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CobW; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103040
symbol: KFX70938.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103045
symbol: KFX70939.1
gene_biotype: protein_coding
description:
  Fatty acid hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103050
symbol: KFX70940.1
gene_biotype: protein_coding
description:
  NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103075
symbol: KFX70945.1
gene_biotype: protein_coding
description:
  GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103080
symbol: KFX70946.1
gene_biotype: protein_coding
description:
  Cell wall assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103085
symbol: KFX70947.1
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103105
symbol: KFX70950.1
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.


ensembl_gene_id: TMS3_0103115
symbol: uvrD
gene_biotype: protein_coding
description:
  DNA-dependent helicase II; Unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103140
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: TMS3_0103160
symbol: KFX70961.1
gene_biotype: protein_coding
description:
  Pyruvate carboxylase subunit A; Catalyzes the ATP-dependent carboxylation of a covalently attached biotin and the transfer of the carboxyl group to pyruvate forming oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103165
symbol: KFX70962.1
gene_biotype: protein_coding
description:
  Pyruvate carboxylase subunit B; Catalyzes the formation of oxaloacetate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103170
symbol: KFX70963.1
gene_biotype: protein_coding
description:
  Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103175
symbol: KFX70964.1
gene_biotype: protein_coding
description:
  Nitrogen regulatory protein P-II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103180
symbol: glsA
gene_biotype: protein_coding
description:
  Glutaminase; Catalyzes the formation of glutamate from glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaminase family.


ensembl_gene_id: TMS3_0103185
symbol: KFX70966.1
gene_biotype: protein_coding
description:
  GNAT family acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103190
symbol: KFX70967.1
gene_biotype: protein_coding
description:
  Asparaginase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103200
symbol: KFX70969.1
gene_biotype: protein_coding
description:
  Cro/Cl family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103210
symbol: KFX70970.1
gene_biotype: protein_coding
description:
  Sensor box protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103225
symbol: KFX70973.1
gene_biotype: protein_coding
description:
  Dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103240
symbol: KFX70976.1
gene_biotype: protein_coding
description:
  FMN-binding negative transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103250
symbol: KFX70978.1
gene_biotype: protein_coding
description:
  Sodium:dicarboxylate symporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: TMS3_0103255
symbol: aspA
gene_biotype: protein_coding
description:
  Aspartate ammonia-lyase; Catalyzes the formation of fumarate from aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103265
symbol: KFX70981.1
gene_biotype: protein_coding
description:
  Gamma-butyrobetaine,2-oxoglutarate dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103280
symbol: KFX70984.1
gene_biotype: protein_coding
description:
  2Fe-2S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103285
symbol: KFX70985.1
gene_biotype: protein_coding
description:
  Amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103300
symbol: KFX70988.1
gene_biotype: protein_coding
description:
  Manganese transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103310
symbol: KFX70989.1
gene_biotype: protein_coding
description:
  Manganese ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: TMS3_0103330
symbol: KFX70992.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: TMS3_0103340
symbol: KFX70994.1
gene_biotype: protein_coding
description:
  Acetylpolyamine aminohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103365
symbol: purE
gene_biotype: protein_coding
description:
  N5-carboxyaminoimidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: TMS3_0103370
symbol: purK
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: TMS3_0103375
symbol: KFX70999.1
gene_biotype: protein_coding
description:
  Transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103385
symbol: KFX71001.1
gene_biotype: protein_coding
description:
  Aldose epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glucose-6-phosphate 1-epimerase family.


ensembl_gene_id: TMS3_0103390
symbol: KFX71002.1
gene_biotype: protein_coding
description:
  RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: TMS3_0103395
symbol: KFX71003.1
gene_biotype: protein_coding
description:
  Macrolide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103400
symbol: KFX71004.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103435
symbol: KFX71011.1
gene_biotype: protein_coding
description:
  Long-chain acyl-CoA thioester hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103440
symbol: KFX71012.1
gene_biotype: protein_coding
description:
  Phosphate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103445
symbol: KFX71013.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103455
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: TMS3_0103475
symbol: KFX71019.1
gene_biotype: protein_coding
description:
  C4-dicarboxylate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103490
symbol: KFX71022.1
gene_biotype: protein_coding
description:
  X-Pro dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103495
symbol: KFX71023.1
gene_biotype: protein_coding
description:
  Deacylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103505
symbol: KFX71025.1
gene_biotype: protein_coding
description:
  AsnC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103515
symbol: KFX71027.1
gene_biotype: protein_coding
description:
  Succinate-semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: TMS3_0103520
symbol: KFX71028.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: TMS3_0103525
symbol: eutB
gene_biotype: protein_coding
description:
  Threonine dehydratase; Catalyzes the formation of 2-oxobutanoate from L-threonine; involved in ectoine utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103530
symbol: KFX71030.1
gene_biotype: protein_coding
description:
  Ectoine utilization protein EutC; Cyclodeaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103535
symbol: KFX71031.1
gene_biotype: protein_coding
description:
  Asp/Glu racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103545
symbol: KFX71033.1
gene_biotype: protein_coding
description:
  CBS domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103555
symbol: KFX71035.1
gene_biotype: protein_coding
description:
  Transcriptional regulator PhoB; Two component response regulator for the phosphate regulon; PhoR phosphorylates PhoB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103565
symbol: ubiA
gene_biotype: protein_coding
description:
  4-hydroxybenzoate polyprenyltransferase; Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3-octaprenyl-4-hydroxybenzoate.


ensembl_gene_id: TMS3_0103570
symbol: ubiC
gene_biotype: protein_coding
description:
  Chorismate--pyruvate lyase; Removes the pyruvyl group from chorismate, with concomitant aromatization of the ring, to provide 4-hydroxybenzoate (4HB) for the ubiquinone pathway; Belongs to the UbiC family.


ensembl_gene_id: TMS3_0103585
symbol: KFX71040.1
gene_biotype: protein_coding
description:
  Hydroxypyruvate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103590
symbol: KFX71041.1
gene_biotype: protein_coding
description:
  Pyruvate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pyruvate kinase family.


ensembl_gene_id: TMS3_0103600
symbol: KFX71043.1
gene_biotype: protein_coding
description:
  Glycolate oxidase subunit GlcD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103605
symbol: glcE
gene_biotype: protein_coding
description:
  Glycolate oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103610
symbol: glcF
gene_biotype: protein_coding
description:
  Glycolate oxidase iron-sulfur subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103625
symbol: KFX71048.1
gene_biotype: protein_coding
description:
  Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: TMS3_0103630
symbol: KFX71049.1
gene_biotype: protein_coding
description:
  Rubredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103640
symbol: KFX71051.1
gene_biotype: protein_coding
description:
  Pyridine nucleotide-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent oxidoreductase family.


ensembl_gene_id: TMS3_0103645
symbol: KFX71052.1
gene_biotype: protein_coding
description:
  Integration host factor; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: TMS3_0103650
symbol: KFX71053.1
gene_biotype: protein_coding
description:
  Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103665
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: TMS3_0103675
symbol: KFX71058.1
gene_biotype: protein_coding
description:
  Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103685
symbol: KFX71060.1
gene_biotype: protein_coding
description:
  (p)ppGpp synthetase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: TMS3_0103690
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: TMS3_0103705
symbol: rph
gene_biotype: protein_coding
description:
  Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: TMS3_0103710
symbol: KFX71065.1
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103715
symbol: KFX71066.1
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103720
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: TMS3_0103725
symbol: KFX71068.1
gene_biotype: protein_coding
description:
  cytokeratin-75;CK-75;Keratin-75;K75;Type II keratin-18;Type II keratin-K6hf;Keratin-6 hair follicle;hK6hf; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103730
symbol: argB
gene_biotype: protein_coding
description:
  Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: TMS3_0103735
symbol: KFX71070.1
gene_biotype: protein_coding
description:
  Phosphomannomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103740
symbol: dut
gene_biotype: protein_coding
description:
  Deoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA; Belongs to the dUTPase family.


ensembl_gene_id: TMS3_0103745
symbol: KFX71072.1
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: TMS3_0103755
symbol: KFX71073.1
gene_biotype: protein_coding
description:
  Maturase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103845
symbol: KFX71084.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SOS response-associated peptidase family.


ensembl_gene_id: TMS3_0103850
symbol: KFX71085.1
gene_biotype: protein_coding
description:
  Peptidase S24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S24 family.


ensembl_gene_id: TMS3_0103855
symbol: KFX71086.1
gene_biotype: protein_coding
description:
  DNA polymerase V subunit UmuC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103875
symbol: KFX71089.1
gene_biotype: protein_coding
description:
  Transposase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103910
symbol: KFX71096.1
gene_biotype: protein_coding
description:
  Antitoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103915
symbol: KFX71097.1
gene_biotype: protein_coding
description:
  RES domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103925
symbol: KFX71099.1
gene_biotype: protein_coding
description:
  Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103930
symbol: KFX71100.1
gene_biotype: protein_coding
description:
  ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103980
symbol: KFX71105.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter substrate-binding protein; DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103985
symbol: rpmB
gene_biotype: protein_coding
description:
  50S ribosomal protein L28; Required for 70S ribosome assembly; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL28 family.


ensembl_gene_id: TMS3_0103990
symbol: rpmG
gene_biotype: protein_coding
description:
  50S ribosomal protein L33; In Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0103995
symbol: KFX71108.1
gene_biotype: protein_coding
description:
  Haloalkane dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104005
symbol: KFX71110.1
gene_biotype: protein_coding
description:
  Omega amino acid--pyruvate aminotransferase; Catalyzes the formation of pyruvate and beta-alanine from L-alanine and 3-oxopropanoate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: TMS3_0104010
symbol: KFX71111.1
gene_biotype: protein_coding
description:
  Aldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: TMS3_0104050
symbol: alr
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: TMS3_0104065
symbol: KFX71121.1
gene_biotype: protein_coding
description:
  acetyl-CoA hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104070
symbol: xpt
gene_biotype: protein_coding
description:
  Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.


ensembl_gene_id: TMS3_0104075
symbol: rep
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase Rep; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction.


ensembl_gene_id: TMS3_0104095
symbol: KFX71125.1
gene_biotype: protein_coding
description:
  Multidrug transporter; Functions as a Na(+)/drug antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104105
symbol: KFX71127.1
gene_biotype: protein_coding
description:
  Magnesium chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104115
symbol: KFX71129.1
gene_biotype: protein_coding
description:
  Nitrogen regulatory protein P-II 1; Indirectly regulates nitrogen metabolism; at high nitrogen levels P-II prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104120
symbol: KFX71130.1
gene_biotype: protein_coding
description:
  Ammonia channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104125
symbol: KFX71131.1
gene_biotype: protein_coding
description:
  Ammonium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104140
symbol: xerC
gene_biotype: protein_coding
description:
  Recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: TMS3_0104150
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: TMS3_0104155
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: TMS3_0104170
symbol: cyaY
gene_biotype: protein_coding
description:
  Frataxin; Involved in iron-sulfur (Fe-S) cluster assembly. May act as a regulator of Fe-S biogenesis.


ensembl_gene_id: TMS3_0104180
symbol: KFX71140.1
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104190
symbol: KFX71142.1
gene_biotype: protein_coding
description:
  Adenylate cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104230
symbol: argH
gene_biotype: protein_coding
description:
  Argininosuccinate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104235
symbol: KFX71148.1
gene_biotype: protein_coding
description:
  Alginate O-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104245
symbol: hemC
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: TMS3_0104250
symbol: KFX71151.1
gene_biotype: protein_coding
description:
  uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: TMS3_0104255
symbol: KFX71152.1
gene_biotype: protein_coding
description:
  uroporphyrin-III methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104260
symbol: KFX71153.1
gene_biotype: protein_coding
description:
  Heme biosynthesis protein HemY; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104265
symbol: dsbB
gene_biotype: protein_coding
description:
  Disulfide bond formation protein DsbB; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family.


ensembl_gene_id: TMS3_0104270
symbol: KFX71155.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Rsd/AlgQ family.


ensembl_gene_id: TMS3_0104285
symbol: KFX71158.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104295
symbol: KFX71160.1
gene_biotype: protein_coding
description:
  Threonine transporter RhtB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104300
symbol: KFX71161.1
gene_biotype: protein_coding
description:
  Cystathionine gamma-synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104305
symbol: KFX71162.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0178 family.


ensembl_gene_id: TMS3_0104315
symbol: KFX71164.1
gene_biotype: protein_coding
description:
  Isoprenoid biosynthesis protein; Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate; Belongs to the peptidase C56 family.


ensembl_gene_id: TMS3_0104325
symbol: KFX71166.1
gene_biotype: protein_coding
description:
  Delta-aminolevulinic acid dehydratase; Catalyzes the formation of porphobilinogen from 5-aminolevulinate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ALAD family.


ensembl_gene_id: TMS3_0104330
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: TMS3_0104335
symbol: KFX71168.1
gene_biotype: protein_coding
description:
  Exopolyphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GppA/Ppx family.


ensembl_gene_id: TMS3_0104340
symbol: KFX71169.1
gene_biotype: protein_coding
description:
  Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thioredoxin family.


ensembl_gene_id: TMS3_0104345
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: TMS3_0104350
symbol: ubiD
gene_biotype: protein_coding
description:
  3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis.


ensembl_gene_id: TMS3_0104355
symbol: KFX71172.1
gene_biotype: protein_coding
description:
  CDP-6-deoxy-delta-3,4-glucoseen reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104365
symbol: KFX71174.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the autoinducer synthase family.


ensembl_gene_id: TMS3_0104405
symbol: KFX71180.1
gene_biotype: protein_coding
description:
  Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104430
symbol: KFX71185.1
gene_biotype: protein_coding
description:
  NADPH:quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104435
symbol: KFX71186.1
gene_biotype: protein_coding
description:
  Flagellar basal body protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: TMS3_0104445
symbol: KFX71188.1
gene_biotype: protein_coding
description:
  EVE domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104450
symbol: KFX71189.1
gene_biotype: protein_coding
description:
  5-formyltetrahydrofolate cyclo-ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.


ensembl_gene_id: TMS3_0104455
symbol: KFX71190.1
gene_biotype: protein_coding
description:
  Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: TMS3_0104465
symbol: KFX71192.1
gene_biotype: protein_coding
description:
  Hypothetical protein; The crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers; function unknown; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0149 family.


ensembl_gene_id: TMS3_0104470
symbol: KFX71193.1
gene_biotype: protein_coding
description:
  Xaa-Pro aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104475
symbol: KFX71194.1
gene_biotype: protein_coding
description:
  2-octaprenyl-6-methoxyphenyl hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104480
symbol: KFX71195.1
gene_biotype: protein_coding
description:
  Tetrameric acyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104485
symbol: KFX71196.1
gene_biotype: protein_coding
description:
  2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104490
symbol: KFX71197.1
gene_biotype: protein_coding
description:
  Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104495
symbol: KFX71198.1
gene_biotype: protein_coding
description:
  Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104500
symbol: gcvT-2
gene_biotype: protein_coding
description:
  Glycine cleavage system protein T; The glycine cleavage system catalyzes the degradation of glycine.


ensembl_gene_id: TMS3_0104505
symbol: gcvH
gene_biotype: protein_coding
description:
  Hypothetical protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: TMS3_0104510
symbol: gcvP
gene_biotype: protein_coding
description:
  Glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.


ensembl_gene_id: TMS3_0104515
symbol: KFX71202.1
gene_biotype: protein_coding
description:
  Ribonucleotide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104520
symbol: KFX71203.1
gene_biotype: protein_coding
description:
  Membrane protein implicated in regulation of membrane protease activity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104525
symbol: KFX71204.1
gene_biotype: protein_coding
description:
  Protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104530
symbol: KFX71205.1
gene_biotype: protein_coding
description:
  Type II secretion system protein E; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104540
symbol: KFX71207.1
gene_biotype: protein_coding
description:
  Phosphate transport regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104545
symbol: KFX71208.1
gene_biotype: protein_coding
description:
  Phosphate permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104550
symbol: KFX71209.1
gene_biotype: protein_coding
description:
  Acetylornithine deacetylase; Catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104555
symbol: argA
gene_biotype: protein_coding
description:
  N-acetylglutamate synthase; Catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104595
symbol: KFX71217.1
gene_biotype: protein_coding
description:
  Type IV secretion protein Rhs; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104600
symbol: KFX71218.1
gene_biotype: protein_coding
description:
  Major exported protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104605
symbol: KFX71219.1
gene_biotype: protein_coding
description:
  Ribosome modulation factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104610
symbol: gshA
gene_biotype: protein_coding
description:
  Glutamate--cysteine ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.


ensembl_gene_id: TMS3_0104620
symbol: KFX71221.1
gene_biotype: protein_coding
description:
  Transcription accessory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104640
symbol: rimK
gene_biotype: protein_coding
description:
  Ribosomal protein S6 modification protein; Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RimK family.


ensembl_gene_id: TMS3_0104645
symbol: KFX71225.1
gene_biotype: protein_coding
description:
  Ribosomal protein S6 modification protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104650
symbol: KFX71226.1
gene_biotype: protein_coding
description:
  RNA-binding protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HSP15 family.


ensembl_gene_id: TMS3_0104655
symbol: KFX71227.1
gene_biotype: protein_coding
description:
  Phosphoesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104660
symbol: hslO
gene_biotype: protein_coding
description:
  Molecular chaperone Hsp33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: TMS3_0104665
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase [ATP]; Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family.


ensembl_gene_id: TMS3_0104670
symbol: KFX71230.1
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104675
symbol: KFX71231.1
gene_biotype: protein_coding
description:
  Nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104700
symbol: KFX71234.1
gene_biotype: protein_coding
description:
  Ribosomal subunit interface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104720
symbol: KFX71237.1
gene_biotype: protein_coding
description:
  Alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104725
symbol: KFX71238.1
gene_biotype: protein_coding
description:
  Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104735
symbol: KFX71240.1
gene_biotype: protein_coding
description:
  Acyl-phosphate glycerol 3-phosphate acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104745
symbol: KFX71242.1
gene_biotype: protein_coding
description:
  Surface antigen; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104750
symbol: KFX71243.1
gene_biotype: protein_coding
description:
  MolR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104755
symbol: KFX71244.1
gene_biotype: protein_coding
description:
  ATP synthase subunit E; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104760
symbol: KFX71245.1
gene_biotype: protein_coding
description:
  Formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104785
symbol: fdhD
gene_biotype: protein_coding
description:
  Iron ABC transporter substrate-binding protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family.


ensembl_gene_id: TMS3_0104790
symbol: KFX71251.1
gene_biotype: protein_coding
description:
  Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104795
symbol: KFX71252.1
gene_biotype: protein_coding
description:
  ADP-ribose diphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104800
symbol: cysQ
gene_biotype: protein_coding
description:
  Adenosine-3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.


ensembl_gene_id: TMS3_0104805
symbol: KFX71254.1
gene_biotype: protein_coding
description:
  Beta-ketoacyl synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: TMS3_0104810
symbol: KFX71255.1
gene_biotype: protein_coding
description:
  acyl-CoA synthetase; Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104840
symbol: KFX71261.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose; Belongs to the dTDP-4-dehydrorhamnose reductase family.


ensembl_gene_id: TMS3_0104845
symbol: KFX71262.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: TMS3_0104850
symbol: KFX71263.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: TMS3_0104855
symbol: KFX71264.1
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: TMS3_0104895
symbol: KFX71268.1
gene_biotype: protein_coding
description:
  3-hydroxybutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: TMS3_0104925
symbol: KFX71273.1
gene_biotype: protein_coding
description:
  C4-dicarboxylate ABC transporter; Part of the tripartite ATP-independent periplasmic (TRAP) transport system.


ensembl_gene_id: TMS3_0104965
symbol: KFX71278.1
gene_biotype: protein_coding
description:
  Amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0104990
symbol: KFX71282.1
gene_biotype: protein_coding
description:
  Iron transporter; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes.


ensembl_gene_id: TMS3_0105000
symbol: KFX71284.1
gene_biotype: protein_coding
description:
  Cell envelope biogenesis protein AsmA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105010
symbol: hisB
gene_biotype: protein_coding
description:
  Imidazoleglycerol-phosphate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105015
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: TMS3_0105020
symbol: KFX71287.1
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105025
symbol: hisA
gene_biotype: protein_coding
description:
  Catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105030
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: TMS3_0105050
symbol: KFX71293.1
gene_biotype: protein_coding
description:
  Peptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family.


ensembl_gene_id: TMS3_0105060
symbol: gpmI
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: TMS3_0105065
symbol: KFX71296.1
gene_biotype: protein_coding
description:
  Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105070
symbol: KFX71297.1
gene_biotype: protein_coding
description:
  Glutaredoxin; Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins.


ensembl_gene_id: TMS3_0105075
symbol: secB
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecB; One of the proteins required for the normal export of preproteins out of the cell cytoplasm. It is a molecular chaperone that binds to a subset of precursor proteins, maintaining them in a translocation-competent state. It also specifically binds to its receptor SecA.


ensembl_gene_id: TMS3_0105080
symbol: trmL
gene_biotype: protein_coding
description:
  rRNA methylase; Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S-adenosyl-L-methionine to the 2'-OH of the wobble nucleotide.


ensembl_gene_id: TMS3_0105090
symbol: glnG
gene_biotype: protein_coding
description:
  Nitrogen regulation protein NR(I); Member of the two-component regulatory system NtrB/NtrC, which controls expression of the nitrogen-regulated (ntr) genes in response to nitrogen limitation. Phosphorylated NtrC binds directly to DNA and stimulates the formation of open promoter-sigma54-RNA polymerase complexes.


ensembl_gene_id: TMS3_0105100
symbol: KFX71303.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105110
symbol: glnA
gene_biotype: protein_coding
description:
  Forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues; addition of adenylyl groups results in inactivation of the enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105115
symbol: thiI
gene_biotype: protein_coding
description:
  tRNA s(4)U8 sulfurtransferase; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.


ensembl_gene_id: TMS3_0105120
symbol: KFX71307.1
gene_biotype: protein_coding
description:
  GTP-binding protein TypA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105130
symbol: KFX71309.1
gene_biotype: protein_coding
description:
  Fe-S-oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105145
symbol: KFX71312.1
gene_biotype: protein_coding
description:
  Alginate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105155
symbol: KFX71313.1
gene_biotype: protein_coding
description:
  poly(beta-D-mannuronate) lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105175
symbol: KFX71317.1
gene_biotype: protein_coding
description:
  poly(beta-D-mannuronate) O-acetylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane-bound acyltransferase family.


ensembl_gene_id: TMS3_0105180
symbol: KFX71318.1
gene_biotype: protein_coding
description:
  Ion channel protein AlgE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105195
symbol: KFX71321.1
gene_biotype: protein_coding
description:
  Glycosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105200
symbol: cpsB
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanyltransferase; Capsular polysaccharide colanic acid biosynthesis protein; catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mannose-6-phosphate isomerase type 2 family.


ensembl_gene_id: TMS3_0105205
symbol: KFX71323.1
gene_biotype: protein_coding
description:
  GDP-mannose dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: TMS3_0105210
symbol: fbp
gene_biotype: protein_coding
description:
  Fructose 1,6-bisphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FBPase class 1 family.


ensembl_gene_id: TMS3_0105215
symbol: KFX71325.1
gene_biotype: protein_coding
description:
  Transmembrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105225
symbol: KFX71327.1
gene_biotype: protein_coding
description:
  Lipocalin; Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids.


ensembl_gene_id: TMS3_0105230
symbol: KFX71328.1
gene_biotype: protein_coding
description:
  Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105240
symbol: KFX71330.1
gene_biotype: protein_coding
description:
  Proline iminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S33 family.


ensembl_gene_id: TMS3_0105245
symbol: dtd
gene_biotype: protein_coding
description:
  D-tyrosyl-tRNA(Tyr) deacylase; An aminoacyl-tRNA editing enzyme that deacylates mischarged D-aminoacyl-tRNAs. Also deacylates mischarged glycyl-tRNA(Ala), protecting cells against glycine mischarging by AlaRS. Acts via tRNA- based rather than protein-based catalysis; rejects L-amino acids rather than detecting D-amino acids in the active site. By recycling D- aminoacyl-tRNA to D-amino acids and free tRNA molecules, this enzyme counteracts the toxicity associated with the formation of D-aminoacyl- tRNA entities in vivo and helps enforce protein L-homochirality. Belongs to the DTD family.


ensembl_gene_id: TMS3_0105265
symbol: KFX71335.1
gene_biotype: protein_coding
description:
  DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105275
symbol: KFX71337.1
gene_biotype: protein_coding
description:
  HxlR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105285
symbol: tatC
gene_biotype: protein_coding
description:
  Twin-arginine protein translocation system subunit TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: TMS3_0105290
symbol: tatB
gene_biotype: protein_coding
description:
  Preprotein translocase subunit TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.


ensembl_gene_id: TMS3_0105295
symbol: tatA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: TMS3_0105300
symbol: hisE
gene_biotype: protein_coding
description:
  phosphoribosyl-ATP pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105305
symbol: hisI
gene_biotype: protein_coding
description:
  phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP.


ensembl_gene_id: TMS3_0105310
symbol: ubiB
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis protein UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis. Belongs to the ABC1 family. UbiB subfamily.


ensembl_gene_id: TMS3_0105315
symbol: KFX71345.1
gene_biotype: protein_coding
description:
  Sterol-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105320
symbol: ubiE
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: TMS3_0105325
symbol: KFX71347.1
gene_biotype: protein_coding
description:
  Polyhydroxyalkanoic acid system protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105330
symbol: KFX71348.1
gene_biotype: protein_coding
description:
  Poly(3-hydroxyalkanoate) granule-associated protein PhaI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105335
symbol: KFX71349.1
gene_biotype: protein_coding
description:
  Poly(3-hydroxyalkanoate) granule-associated protein PhaF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105345
symbol: KFX71351.1
gene_biotype: protein_coding
description:
  poly(R)-hydroxyalkanoic acid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105350
symbol: KFX71352.1
gene_biotype: protein_coding
description:
  Poly(3-hydroxyalkanoate) depolymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105365
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: TMS3_0105370
symbol: hslV
gene_biotype: protein_coding
description:
  ATP-dependent protease subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: TMS3_0105375
symbol: KFX71357.1
gene_biotype: protein_coding
description:
  Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105380
symbol: argS
gene_biotype: protein_coding
description:
  arginyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105385
symbol: priA
gene_biotype: protein_coding
description:
  Primosomal protein N; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: TMS3_0105400
symbol: KFX71362.1
gene_biotype: protein_coding
description:
  Peptidase M48 Ste24p; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105405
symbol: KFX71363.1
gene_biotype: protein_coding
description:
  Malate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105410
symbol: KFX71364.1
gene_biotype: protein_coding
description:
  Peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105415
symbol: KFX71365.1
gene_biotype: protein_coding
description:
  Pilus assembly protein PilM; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105420
symbol: KFX71366.1
gene_biotype: protein_coding
description:
  Pilus assembly protein PilN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105425
symbol: KFX71367.1
gene_biotype: protein_coding
description:
  Pilus assembly protein PilP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105435
symbol: KFX71369.1
gene_biotype: protein_coding
description:
  Fimbrial protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105440
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: TMS3_0105445
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: TMS3_0105455
symbol: gltB
gene_biotype: protein_coding
description:
  Catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105460
symbol: KFX71374.1
gene_biotype: protein_coding
description:
  Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105465
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: TMS3_0105480
symbol: KFX71378.1
gene_biotype: protein_coding
description:
  FabB; beta-ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: TMS3_0105485
symbol: fabG
gene_biotype: protein_coding
description:
  3-ketoacyl-ACP reductase; Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105490
symbol: KFX71380.1
gene_biotype: protein_coding
description:
  3-hydroxylacyl-ACP dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105495
symbol: KFX71381.1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: TMS3_0105515
symbol: KFX71384.1
gene_biotype: protein_coding
description:
  Membrane protein; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: TMS3_0105525
symbol: KFX71386.1
gene_biotype: protein_coding
description:
  Histidine ammonia-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105540
symbol: KFX71389.1
gene_biotype: protein_coding
description:
  AMP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105550
symbol: KFX71391.1
gene_biotype: protein_coding
description:
  Acyl carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105560
symbol: KFX71393.1
gene_biotype: protein_coding
description:
  Acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105565
symbol: KFX71394.1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105570
symbol: KFX71395.1
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CobQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105575
symbol: KFX71396.1
gene_biotype: protein_coding
description:
  Universal stress protein UspA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105585
symbol: KFX71398.1
gene_biotype: protein_coding
description:
  Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105590
symbol: KFX71399.1
gene_biotype: protein_coding
description:
  O-acetylhomoserine aminocarboxypropyltransferase; Catalyzes the formation of L-methionine and acetate from O-acetyl-L-homoserine and methanethiol; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105595
symbol: KFX71400.1
gene_biotype: protein_coding
description:
  dATP pyrophosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105600
symbol: KFX71401.1
gene_biotype: protein_coding
description:
  Racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105605
symbol: selO
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.


ensembl_gene_id: TMS3_0105610
symbol: KFX71403.1
gene_biotype: protein_coding
description:
  Potassium transporter KefA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105615
symbol: cvrA
gene_biotype: protein_coding
description:
  Potassium/proton antiporter; K(+)/H(+) antiporter that extrudes potassium in exchange for external protons and maintains the internal concentration of potassium under toxic levels; Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. NhaP2 subfamily.


ensembl_gene_id: TMS3_0105630
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: TMS3_0105645
symbol: KFX71410.1
gene_biotype: protein_coding
description:
  Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase complex; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: TMS3_0105650
symbol: aceE
gene_biotype: protein_coding
description:
  Pyruvate dehydrogenase; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2).


ensembl_gene_id: TMS3_0105655
symbol: glnE
gene_biotype: protein_coding
description:
  Bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase; Involved in the regulation of glutamine synthetase GlnA, a key enzyme in the process to assimilate ammonia. When cellular nitrogen levels are high, the C-terminal adenylyl transferase (AT) inactivates GlnA by covalent transfer of an adenylyl group from ATP to specific tyrosine residue of GlnA, thus reducing its activity. Conversely, when nitrogen levels are low, the N-terminal adenylyl removase (AR) activates GlnA by removing the adenylyl group by phosphorolysis, increasing its activity. The regulatory region of [...]


ensembl_gene_id: TMS3_0105660
symbol: ilvE
gene_biotype: protein_coding
description:
  Branched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: TMS3_0105665
symbol: KFX71414.1
gene_biotype: protein_coding
description:
  ADP-heptose--LPS heptosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105675
symbol: KFX71416.1
gene_biotype: protein_coding
description:
  Glucosyltransferase I RfaG; Catalyzes the addition of the first glucose residue to the LPS core; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105680
symbol: KFX71417.1
gene_biotype: protein_coding
description:
  Heptose kinase; Catalyzes the phosphorylation of heptose(I) of the outer membrane lipopolysaccharide core; Belongs to the protein kinase superfamily. KdkA/rfaP family.


ensembl_gene_id: TMS3_0105685
symbol: KFX71418.1
gene_biotype: protein_coding
description:
  Heptose kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105690
symbol: KFX71419.1
gene_biotype: protein_coding
description:
  Lipopolysaccharide kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105700
symbol: KFX71421.1
gene_biotype: protein_coding
description:
  Carbamoyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105725
symbol: KFX71426.1
gene_biotype: protein_coding
description:
  Aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: TMS3_0105730
symbol: KFX71427.1
gene_biotype: protein_coding
description:
  dTDP-6-deoxy-3,4-keto-hexulose isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105750
symbol: msbA
gene_biotype: protein_coding
description:
  Lipid transporter ATP-binding/permease; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.


ensembl_gene_id: TMS3_0105755
symbol: hldE
gene_biotype: protein_coding
description:
  Heptose 1-phosphate adenyltransferase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: TMS3_0105790
symbol: KFX71436.1
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-octulosonic acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.


ensembl_gene_id: TMS3_0105795
symbol: KFX71437.1
gene_biotype: protein_coding
description:
  Channel protein TolC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105800
symbol: thiC
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.


ensembl_gene_id: TMS3_0105805
symbol: nudF
gene_biotype: protein_coding
description:
  ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105810
symbol: KFX71440.1
gene_biotype: protein_coding
description:
  Cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105815
symbol: cpdA
gene_biotype: protein_coding
description:
  Serine/threonine protein phosphatase; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.


ensembl_gene_id: TMS3_0105825
symbol: parE
gene_biotype: protein_coding
description:
  DNA topoisomerase IV subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 1 subfamily.


ensembl_gene_id: TMS3_0105830
symbol: KFX71444.1
gene_biotype: protein_coding
description:
  DNA topoisomerase IV subunit B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105835
symbol: KFX71445.1
gene_biotype: protein_coding
description:
  Aspartyl protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105840
symbol: parC
gene_biotype: protein_coding
description:
  DNA topoisomerase IV subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 1 subfamily.


ensembl_gene_id: TMS3_0105870
symbol: KFX71451.1
gene_biotype: protein_coding
description:
  Ferrous iron transporter C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105875
symbol: KFX71452.1
gene_biotype: protein_coding
description:
  Molecular chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105880
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: TMS3_0105885
symbol: KFX71454.1
gene_biotype: protein_coding
description:
  Thiosulfate sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105895
symbol: KFX71456.1
gene_biotype: protein_coding
description:
  Flagellar motor protein MotA; With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105900
symbol: KFX71457.1
gene_biotype: protein_coding
description:
  Flagellar motor protein MotB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105905
symbol: rsgA
gene_biotype: protein_coding
description:
  GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: TMS3_0105910
symbol: KFX71459.1
gene_biotype: protein_coding
description:
  Trans-aconitate methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0105915
symbol: orn
gene_biotype: protein_coding
description:
  Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family.


ensembl_gene_id: TMS3_0105920
symbol: queG
gene_biotype: protein_coding
description:
  Epoxyqueuosine reductase; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family.


ensembl_gene_id: TMS3_0105925
symbol: nnrE
gene_biotype: protein_coding
description:
  Carbohydrate kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...]


ensembl_gene_id: TMS3_0105940
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: TMS3_0105945
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: TMS3_0105950
symbol: hfq
gene_biotype: protein_coding
description:
  RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: TMS3_0105955
symbol: hflX
gene_biotype: protein_coding
description:
  GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: TMS3_0105975
symbol: hisZ
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: TMS3_0105980
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: TMS3_0105995
symbol: rnr
gene_biotype: protein_coding
description:
  Exoribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: TMS3_0106010
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: TMS3_0106025
symbol: KFX71480.1
gene_biotype: protein_coding
description:
  DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity and contains distinct active sites for ATP binding, DNA binding, and interaction with DnaC protein, primase, and other prepriming proteins. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: TMS3_0106030
symbol: KFX71481.1
gene_biotype: protein_coding
description:
  DeoR faimly transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106055
symbol: KFX71486.1
gene_biotype: protein_coding
description:
  Heat-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106075
symbol: KFX71490.1
gene_biotype: protein_coding
description:
  Oxaloacetate decarboxylase; Catalyzes the decarboxylation of oxaloacetate into pyruvate. Seems to play a role in maintaining cellular concentrations of bicarbonate and pyruvate; Belongs to the isocitrate lyase family. Oxaloacetate decarboxylase subfamily.


ensembl_gene_id: TMS3_0106090
symbol: KFX71493.1
gene_biotype: protein_coding
description:
  Hemerythrin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106095
symbol: ureC
gene_biotype: protein_coding
description:
  Urease subunit alpha; Ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureC (alpha) and 3 ureAB (gamma/beta) subunits; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106100
symbol: ureB
gene_biotype: protein_coding
description:
  Urease subunit beta; Ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori and Yersinia enterocolitica the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 UreC (alpha) and 3 UreAB (gamma/beta); in Brucella suis the urease encoded by this operon (one of two urease-encoding operons found in its genome) is involved with urease activity, optimum growth, resistance to low-pH killing in-vitro and persistence in-vivo, while the other operon does not seem  [...]


ensembl_gene_id: TMS3_0106105
symbol: KFX71496.1
gene_biotype: protein_coding
description:
  Acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106115
symbol: ureA
gene_biotype: protein_coding
description:
  Urease subunit gamma; UreA, with UreB and UreC catalyzes the hydrolysis of urea into ammonia and carbon dioxide; nickel metalloenzyme; accessory proteins UreD, UreE, UreF, and UreG are necessary for assembly of the metallocenter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the urease gamma subunit family.


ensembl_gene_id: TMS3_0106120
symbol: ureD
gene_biotype: protein_coding
description:
  Urease accessory protein UreD; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: TMS3_0106125
symbol: KFX71500.1
gene_biotype: protein_coding
description:
  Urea ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106135
symbol: KFX71502.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: TMS3_0106140
symbol: KFX71503.1
gene_biotype: protein_coding
description:
  Urea ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: TMS3_0106145
symbol: KFX71504.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106155
symbol: KFX71506.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106160
symbol: KFX71507.1
gene_biotype: protein_coding
description:
  Sialidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106170
symbol: purD
gene_biotype: protein_coding
description:
  Phosphoribosylamine--glycine ligase; Catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GARS family.


ensembl_gene_id: TMS3_0106180
symbol: purH
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazolecarboxamide formyltransferase; Involved in de novo purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106185
symbol: KFX71511.1
gene_biotype: protein_coding
description:
  Fis family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transcriptional regulatory Fis family.


ensembl_gene_id: TMS3_0106190
symbol: dusB
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the Dus family. DusB subfamily.


ensembl_gene_id: TMS3_0106200
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: TMS3_0106205
symbol: KFX71515.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: TMS3_0106215
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: TMS3_0106220
symbol: dsbD
gene_biotype: protein_coding
description:
  Thiol:disulfide interchange protein; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily.


ensembl_gene_id: TMS3_0106240
symbol: KFX71522.1
gene_biotype: protein_coding
description:
  NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106245
symbol: KFX71523.1
gene_biotype: protein_coding
description:
  Translation initiation factor Sui1; Involved in start site selection during the initiation of translation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106295
symbol: KFX71532.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein 1C; Penicillin-insensitive transglycosylase/transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106300
symbol: KFX71533.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106310
symbol: KFX71535.1
gene_biotype: protein_coding
description:
  Acetylserine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106315
symbol: KFX71536.1
gene_biotype: protein_coding
description:
  Osmoprotectant uptake system substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106330
symbol: KFX71539.1
gene_biotype: protein_coding
description:
  Osmoprotectant uptake system permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106355
symbol: KFX71544.1
gene_biotype: protein_coding
description:
  Sulfate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106375
symbol: cmoM
gene_biotype: protein_coding
description:
  SAM-dependent methyltransferase; Catalyzes the methylation of 5-carboxymethoxyuridine (cmo5U) to form 5-methoxycarbonylmethoxyuridine (mcmo5U) at position 34 in tRNAs; Belongs to the class I-like SAM-binding methyltransferase superfamily. CmoM family.


ensembl_gene_id: TMS3_0106380
symbol: KFX71549.1
gene_biotype: protein_coding
description:
  Pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106385
symbol: KFX71550.1
gene_biotype: protein_coding
description:
  Acyl dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106395
symbol: KFX71552.1
gene_biotype: protein_coding
description:
  acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: TMS3_0106405
symbol: KFX71554.1
gene_biotype: protein_coding
description:
  Sulfonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the purine-cytosine permease (2.A.39) family.


ensembl_gene_id: TMS3_0106410
symbol: KFX71555.1
gene_biotype: protein_coding
description:
  Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106420
symbol: KFX71556.1
gene_biotype: protein_coding
description:
  Monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106430
symbol: KFX71558.1
gene_biotype: protein_coding
description:
  Flavin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106440
symbol: KFX71560.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: TMS3_0106460
symbol: ribB
gene_biotype: protein_coding
description:
  3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.


ensembl_gene_id: TMS3_0106475
symbol: KFX71566.1
gene_biotype: protein_coding
description:
  NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family.


ensembl_gene_id: TMS3_0106485
symbol: KFX71568.1
gene_biotype: protein_coding
description:
  4-carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106500
symbol: KFX71571.1
gene_biotype: protein_coding
description:
  Carnitine dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: TMS3_0106505
symbol: KFX71572.1
gene_biotype: protein_coding
description:
  3-oxoadipate enol-lactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106510
symbol: KFX71573.1
gene_biotype: protein_coding
description:
  Peptide synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106525
symbol: KFX71575.1
gene_biotype: protein_coding
description:
  2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106530
symbol: KFX71576.1
gene_biotype: protein_coding
description:
  3-beta hydroxysteroid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106545
symbol: KFX71579.1
gene_biotype: protein_coding
description:
  Metallopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106550
symbol: KFX71580.1
gene_biotype: protein_coding
description:
  Metal-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106580
symbol: KFX71585.1
gene_biotype: protein_coding
description:
  Arginase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arginase family.


ensembl_gene_id: TMS3_0106600
symbol: trmA
gene_biotype: protein_coding
description:
  tRNA (uracil-5-)-methyltransferase; Dual-specificity methyltransferase that catalyzes the formation of 5-methyluridine at position 54 (m5U54) in all tRNAs, and that of position 341 (m5U341) in tmRNA (transfer-mRNA).


ensembl_gene_id: TMS3_0106605
symbol: KFX71589.1
gene_biotype: protein_coding
description:
  Guanine permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106610
symbol: KFX71590.1
gene_biotype: protein_coding
description:
  Dihydroxyacetone kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106635
symbol: KFX71594.1
gene_biotype: protein_coding
description:
  Cytochrome D ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106640
symbol: KFX71595.1
gene_biotype: protein_coding
description:
  Ubiquinol oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106645
symbol: KFX71596.1
gene_biotype: protein_coding
description:
  Cyanide insensitive terminal oxidase, subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106650
symbol: rlmG
gene_biotype: protein_coding
description:
  50S rRNA methyltransferase; Specifically methylates the guanine in position 1835 (m2G1835) of 23S rRNA.


ensembl_gene_id: TMS3_0106655
symbol: KFX71598.1
gene_biotype: protein_coding
description:
  ferredoxin-NADP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106660
symbol: mscL
gene_biotype: protein_coding
description:
  Large-conductance mechanosensitive channel; Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell.


ensembl_gene_id: TMS3_0106665
symbol: KFX71600.1
gene_biotype: protein_coding
description:
  GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106675
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: TMS3_0106680
symbol: KFX71603.1
gene_biotype: protein_coding
description:
  Pilus assembly protein; Binds the second messenger bis-(3'-5') cyclic dimeric guanosine monophosphate (c-di-GMP). Can bind two c-di-GMP molecules per monomer. May play a role in bacterial second-messenger regulated processes. Binding to c-di-GMP induces a conformational change of the C- and N-termini resulting in the exposure of a highly negative surface on one side of the protein to a possible effector protein.


ensembl_gene_id: TMS3_0106690
symbol: glyA
gene_biotype: protein_coding
description:
  Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: TMS3_0106710
symbol: KFX71609.1
gene_biotype: protein_coding
description:
  RNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106715
symbol: KFX71610.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein TraR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106720
symbol: KFX71611.1
gene_biotype: protein_coding
description:
  Sodium:proton exchanger; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: TMS3_0106725
symbol: KFX71612.1
gene_biotype: protein_coding
description:
  ATP-dependent protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106740
symbol: KFX71615.1
gene_biotype: protein_coding
description:
  Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106755
symbol: KFX71618.1
gene_biotype: protein_coding
description:
  Octaprenyl-diphosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: TMS3_0106765
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: TMS3_0106770
symbol: rpmA
gene_biotype: protein_coding
description:
  50S ribosomal protein L27; Involved in the peptidyltransferase reaction during translation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL27 family.


ensembl_gene_id: TMS3_0106775
symbol: obgE
gene_biotype: protein_coding
description:
  GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: TMS3_0106780
symbol: proB
gene_biotype: protein_coding
description:
  Gamma-glutamyl kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: TMS3_0106795
symbol: murJ
gene_biotype: protein_coding
description:
  Membrane protein; Involved in peptidoglycan biosynthesis. Transports lipid- linked peptidoglycan precursors from the inner to the outer leaflet of the cytoplasmic membrane.


ensembl_gene_id: TMS3_0106800
symbol: KFX71627.1
gene_biotype: protein_coding
description:
  FMN adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribF family.


ensembl_gene_id: TMS3_0106805
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: TMS3_0106810
symbol: lspA
gene_biotype: protein_coding
description:
  Peptidase A8; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: TMS3_0106815
symbol: KFX71630.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; Rotamase; accelerates isomerization of the peptidyl prolyl bond, involved in the folding of proteases; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106820
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: TMS3_0106835
symbol: KFX71634.1
gene_biotype: protein_coding
description:
  Pilus assembly protein PilV; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106870
symbol: KFX71639.1
gene_biotype: protein_coding
description:
  RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106875
symbol: KFX71640.1
gene_biotype: protein_coding
description:
  Major facilitator transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106895
symbol: KFX71644.1
gene_biotype: protein_coding
description:
  NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.


ensembl_gene_id: TMS3_0106945
symbol: KFX71654.1
gene_biotype: protein_coding
description:
  Adenine deaminase; Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism.


ensembl_gene_id: TMS3_0106950
symbol: KFX71655.1
gene_biotype: protein_coding
description:
  8-oxoguanine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106955
symbol: KFX71656.1
gene_biotype: protein_coding
description:
  Thymidylate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106980
symbol: KFX71661.1
gene_biotype: protein_coding
description:
  Omega amino acid--pyruvate aminotransferase; Catalyze the conversion of beta amino acids to the corresponding beta keto acid with pyruvate as the amine acceptor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: TMS3_0106985
symbol: KFX71662.1
gene_biotype: protein_coding
description:
  Methylmalonate-semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106990
symbol: KFX71663.1
gene_biotype: protein_coding
description:
  Phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0106995
symbol: KFX71664.1
gene_biotype: protein_coding
description:
  Cytochrome biogenesis protein ResB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107015
symbol: KFX71668.1
gene_biotype: protein_coding
description:
  Band 7 protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107020
symbol: KFX71669.1
gene_biotype: protein_coding
description:
  Alkylphosphonate utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107025
symbol: KFX71670.1
gene_biotype: protein_coding
description:
  Arylamine N-acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arylamine N-acetyltransferase family.


ensembl_gene_id: TMS3_0107030
symbol: KFX71671.1
gene_biotype: protein_coding
description:
  DoxX family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107045
symbol: KFX71674.1
gene_biotype: protein_coding
description:
  Glutaredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107060
symbol: KFX71676.1
gene_biotype: protein_coding
description:
  Cytochrome c family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107070
symbol: KFX71678.1
gene_biotype: protein_coding
description:
  Alkylhydroperoxidase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: TMS3_0107080
symbol: KFX71680.1
gene_biotype: protein_coding
description:
  Water stress/hypersensitive response domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107100
symbol: KFX71684.1
gene_biotype: protein_coding
description:
  Flavodoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107125
symbol: KFX71688.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: TMS3_0107175
symbol: KFX71697.1
gene_biotype: protein_coding
description:
  IclR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107180
symbol: KFX71698.1
gene_biotype: protein_coding
description:
  Sarcosine oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.


ensembl_gene_id: TMS3_0107185
symbol: KFX71699.1
gene_biotype: protein_coding
description:
  Aminomethyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.


ensembl_gene_id: TMS3_0107200
symbol: folD
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: TMS3_0107225
symbol: KFX71707.1
gene_biotype: protein_coding
description:
  Protein glxC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107230
symbol: KFX71708.1
gene_biotype: protein_coding
description:
  Glutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate synthase family.


ensembl_gene_id: TMS3_0107265
symbol: KFX71714.1
gene_biotype: protein_coding
description:
  Potassium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107345
symbol: KFX71726.1
gene_biotype: protein_coding
description:
  Vanillate O-demethylase oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107385
symbol: KFX71732.1
gene_biotype: protein_coding
description:
  Nodulation protein NfeD; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: TMS3_0107390
symbol: KFX71733.1
gene_biotype: protein_coding
description:
  2-polyprenyl-6-methoxyphenol hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107440
symbol: KFX71742.1
gene_biotype: protein_coding
description:
  Vanillate monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107450
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: TMS3_0107460
symbol: KFX71745.1
gene_biotype: protein_coding
description:
  LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107475
symbol: KFX71747.1
gene_biotype: protein_coding
description:
  (2Fe-2S)-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107480
symbol: KFX71748.1
gene_biotype: protein_coding
description:
  Gluconolactonase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107485
symbol: KFX71749.1
gene_biotype: protein_coding
description:
  Fumarylacetoacetate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107490
symbol: KFX71750.1
gene_biotype: protein_coding
description:
  Epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107495
symbol: KFX71751.1
gene_biotype: protein_coding
description:
  Cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107510
symbol: KFX71754.1
gene_biotype: protein_coding
description:
  GlcG protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107525
symbol: KFX71756.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of protocatechuate from 4-hydroxybenzoate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107540
symbol: KFX71759.1
gene_biotype: protein_coding
description:
  Protocatechuate 3,4-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107550
symbol: KFX71761.1
gene_biotype: protein_coding
description:
  3-carboxy-cis,cis-muconate cycloisomerase; Catalyzes the cycloisomerization of cis,cis-muconate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107580
symbol: KFX71766.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.


ensembl_gene_id: TMS3_0107605
symbol: KFX71769.1
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide pyrophosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NadC/ModD family.


ensembl_gene_id: TMS3_0107610
symbol: KFX71770.1
gene_biotype: protein_coding
description:
  Betaine-aldehyde dehydrogenase; Catalyzes the formation of betaine from betaine aldehyde; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107615
symbol: KFX71771.1
gene_biotype: protein_coding
description:
  2-keto-4-pentenoate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107630
symbol: KFX71772.1
gene_biotype: protein_coding
description:
  4-oxalocrotonate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107635
symbol: KFX71773.1
gene_biotype: protein_coding
description:
  4-oxalocrotonate tautomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 4-oxalocrotonate tautomerase family.


ensembl_gene_id: TMS3_0107640
symbol: KFX71774.1
gene_biotype: protein_coding
description:
  2-hydroxy-6-oxo-2,4-heptadienoate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107650
symbol: KFX71776.1
gene_biotype: protein_coding
description:
  Benzoate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107675
symbol: KFX71781.1
gene_biotype: protein_coding
description:
  1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: TMS3_0107680
symbol: KFX71782.1
gene_biotype: protein_coding
description:
  Drug/metabolite transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107700
symbol: KFX71786.1
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107740
symbol: KFX71792.1
gene_biotype: protein_coding
description:
  Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107760
symbol: KFX71796.1
gene_biotype: protein_coding
description:
  Nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107780
symbol: KFX71800.1
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107790
symbol: KFX71802.1
gene_biotype: protein_coding
description:
  Lactate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107805
symbol: KFX71804.1
gene_biotype: protein_coding
description:
  Prophage CP4-57 regulatory, AlpA-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107810
symbol: KFX71805.1
gene_biotype: protein_coding
description:
  Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.


ensembl_gene_id: TMS3_0107830
symbol: KFX71809.1
gene_biotype: protein_coding
description:
  4Fe-4S ferredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107835
symbol: lldD
gene_biotype: protein_coding
description:
  Lactate dehydrogenase; Catalyzes the conversion of L-lactate to pyruvate. Is coupled to the respiratory chain.


ensembl_gene_id: TMS3_0107845
symbol: pdhR
gene_biotype: protein_coding
description:
  Transcriptional regulator PdhR; Activates lctPRD operon; autoregulates itself through repression of pdhR-aceEF-lpdA operon; regulates pyruvate dehydrogenase complex; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107850
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: TMS3_0107855
symbol: KFX71814.1
gene_biotype: protein_coding
description:
  Symporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.


ensembl_gene_id: TMS3_0107860
symbol: KFX71815.1
gene_biotype: protein_coding
description:
  Ribosome association toxin RatA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107865
symbol: KFX71816.1
gene_biotype: protein_coding
description:
  Protein RnfH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0125 (RnfH) family.


ensembl_gene_id: TMS3_0107870
symbol: bamE
gene_biotype: protein_coding
description:
  Membrane protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: TMS3_0107885
symbol: grpE
gene_biotype: protein_coding
description:
  Heat shock protein GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP- [...]


ensembl_gene_id: TMS3_0107895
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: TMS3_0107900
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: TMS3_0107905
symbol: carA
gene_biotype: protein_coding
description:
  Carbamoyl phosphate synthase small subunit; Catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107910
symbol: carB
gene_biotype: protein_coding
description:
  Carbamoyl phosphate synthase large subunit; Four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107915
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: TMS3_0107925
symbol: KFX71828.1
gene_biotype: protein_coding
description:
  RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107930
symbol: rlmE
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.


ensembl_gene_id: TMS3_0107935
symbol: hflB
gene_biotype: protein_coding
description:
  ATP-dependent metalloprotease; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: TMS3_0107940
symbol: folP
gene_biotype: protein_coding
description:
  Catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate and 4-aminobenzoate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0107945
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: TMS3_0107950
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: TMS3_0107955
symbol: KFX71834.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: TMS3_0107970
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation protein RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: TMS3_0107975
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription elongation factor NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: TMS3_0107980
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: TMS3_0107985
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: TMS3_0107990
symbol: truB
gene_biotype: protein_coding
description:
  Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: TMS3_0107995
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: TMS3_0108000
symbol: pnp
gene_biotype: protein_coding
description:
  Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: TMS3_0108005
symbol: KFX71842.1
gene_biotype: protein_coding
description:
  Phospholipid-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108010
symbol: KFX71843.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family.


ensembl_gene_id: TMS3_0108035
symbol: KFX71848.1
gene_biotype: protein_coding
description:
  SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methyltransferase superfamily.


ensembl_gene_id: TMS3_0108045
symbol: acsA
gene_biotype: protein_coding
description:
  acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.


ensembl_gene_id: TMS3_0108060
symbol: panC
gene_biotype: protein_coding
description:
  Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: TMS3_0108065
symbol: panB
gene_biotype: protein_coding
description:
  3-methyl-2-oxobutanoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: TMS3_0108105
symbol: KFX71859.1
gene_biotype: protein_coding
description:
  LOG family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LOG family.


ensembl_gene_id: TMS3_0108120
symbol: KFX71862.1
gene_biotype: protein_coding
description:
  LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: TMS3_0108125
symbol: KFX71863.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: TMS3_0108140
symbol: KFX71866.1
gene_biotype: protein_coding
description:
  Glycerophosphodiester phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108145
symbol: KFX71867.1
gene_biotype: protein_coding
description:
  Protein hupE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108150
symbol: ureG
gene_biotype: protein_coding
description:
  Urease accessory protein UreG; Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG.


ensembl_gene_id: TMS3_0108155
symbol: ureF
gene_biotype: protein_coding
description:
  Urease accessory protein UreF; Required for maturation of urease via the functional incorporation of the urease nickel metallocenter.


ensembl_gene_id: TMS3_0108160
symbol: ureE
gene_biotype: protein_coding
description:
  Urease accessory protein UreE; Involved in urease metallocenter assembly. Binds nickel. Probably functions as a nickel donor during metallocenter assembly. Belongs to the UreE family.


ensembl_gene_id: TMS3_0108235
symbol: KFX71885.1
gene_biotype: protein_coding
description:
  3-hydroxyisobutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108250
symbol: gluQ
gene_biotype: protein_coding
description:
  glutamyl-Q tRNA(Asp) ligase; Catalyzes the tRNA-independent activation of glutamate in presence of ATP and the subsequent transfer of glutamate onto a tRNA(Asp). Glutamate is transferred on the 2-amino-5-(4,5-dihydroxy-2- cyclopenten-1-yl) moiety of the queuosine in the wobble position of the QUC anticodon; Belongs to the class-I aminoacyl-tRNA synthetase family. GluQ subfamily.


ensembl_gene_id: TMS3_0108255
symbol: dksA
gene_biotype: protein_coding
description:
  Molecular chaperone DnaK; Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters. Also required for regulation of fis expression.


ensembl_gene_id: TMS3_0108265
symbol: sfsA
gene_biotype: protein_coding
description:
  XRE family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SfsA family.


ensembl_gene_id: TMS3_0108275
symbol: KFX71893.1
gene_biotype: protein_coding
description:
  ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: TMS3_0108280
symbol: hmuV
gene_biotype: protein_coding
description:
  Hemin ABC transporter ATP-binding protein; Part of the ABC transporter complex HmuTUV involved in hemin import. Responsible for energy coupling to the transport system.


ensembl_gene_id: TMS3_0108285
symbol: KFX71895.1
gene_biotype: protein_coding
description:
  iron(III) ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108290
symbol: KFX71896.1
gene_biotype: protein_coding
description:
  cAMP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108295
symbol: KFX71897.1
gene_biotype: protein_coding
description:
  Competence protein TfoX; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108305
symbol: KFX71899.1
gene_biotype: protein_coding
description:
  Pentapeptide repeat-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108315
symbol: KFX71901.1
gene_biotype: protein_coding
description:
  Penicillin-binding protein; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits).


ensembl_gene_id: TMS3_0108325
symbol: KFX71903.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108330
symbol: KFX71904.1
gene_biotype: protein_coding
description:
  Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108335
symbol: KFX71905.1
gene_biotype: protein_coding
description:
  Acetolactate synthase 3 catalytic subunit; Catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108340
symbol: ilvH
gene_biotype: protein_coding
description:
  Acetolactate synthase 3 regulatory subunit; With IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108350
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: TMS3_0108355
symbol: KFX71909.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol--serine O-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: TMS3_0108365
symbol: KFX69529.1
gene_biotype: protein_coding
description:
  Paraquat-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108375
symbol: KFX69531.1
gene_biotype: protein_coding
description:
  Mammalian cell entry protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108380
symbol: KFX69532.1
gene_biotype: protein_coding
description:
  Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108395
symbol: KFX69534.1
gene_biotype: protein_coding
description:
  Carboxynorspermidine decarboxylase; Catalyzes the decarboxylation of carboxynorspermidine and carboxyspermidine; Belongs to the Orn/Lys/Arg decarboxylase class-II family. NspC subfamily.


ensembl_gene_id: TMS3_0108400
symbol: KFX69535.1
gene_biotype: protein_coding
description:
  Saccharopine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108405
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: TMS3_0108435
symbol: KFX69541.1
gene_biotype: protein_coding
description:
  Permease, DMT superfamily; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108450
symbol: KFX69542.1
gene_biotype: protein_coding
description:
  Methyltransferase type 11; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108455
symbol: KFX69543.1
gene_biotype: protein_coding
description:
  Panthothenate synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108475
symbol: ychF
gene_biotype: protein_coding
description:
  GTP-binding protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: TMS3_0108480
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: TMS3_0108485
symbol: rplY
gene_biotype: protein_coding
description:
  50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily.


ensembl_gene_id: TMS3_0108490
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: TMS3_0108495
symbol: ispE
gene_biotype: protein_coding
description:
  Kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: TMS3_0108500
symbol: lolB
gene_biotype: protein_coding
description:
  Membrane protein; Plays a critical role in the incorporation of lipoproteins in the outer membrane after they are released by the LolA protein.


ensembl_gene_id: TMS3_0108510
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: TMS3_0108515
symbol: prfA
gene_biotype: protein_coding
description:
  Peptide chain release factor 1; Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: TMS3_0108520
symbol: prmC
gene_biotype: protein_coding
description:
  SAM-dependent methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: TMS3_0108525
symbol: KFX69556.1
gene_biotype: protein_coding
description:
  Molybdopterin-synthase adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108550
symbol: KFX69561.1
gene_biotype: protein_coding
description:
  Cyclopropane-fatty-acyl-phospholipid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108575
symbol: KFX69566.1
gene_biotype: protein_coding
description:
  Deoxyribodipyrimidine photolyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA photolyase family.


ensembl_gene_id: TMS3_0108580
symbol: KFX69567.1
gene_biotype: protein_coding
description:
  MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108595
symbol: KFX69570.1
gene_biotype: protein_coding
description:
  FAD-dependent oxidoreductase; Catalyzes the oxidation of the 1,2-dihydro- and 1,6- dihydro- isomeric forms of beta-NAD(P) back to beta-NAD(P)+. May serve to protect primary metabolism dehydrogenases from inhibition by the 1,2-dihydro- and 1,6-dihydro-beta-NAD(P) isomers; Belongs to the bacterial renalase family.


ensembl_gene_id: TMS3_0108600
symbol: KFX69571.1
gene_biotype: protein_coding
description:
  NAD-dependent dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108605
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: TMS3_0108615
symbol: KFX69574.1
gene_biotype: protein_coding
description:
  Uracil transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108620
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: TMS3_0108625
symbol: KFX69576.1
gene_biotype: protein_coding
description:
  Hypoxanthine-guanine phosphoribosyltransferase; Catalyzes the salvage synthesis of inosine-5'-monophosphate (IMP) and guanosine-5'-monophosphate (GMP) from the purine bases hypoxanthine and guanine, respectively; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108635
symbol: KFX69578.1
gene_biotype: protein_coding
description:
  Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LDH2/MDH2 oxidoreductase family.


ensembl_gene_id: TMS3_0108640
symbol: KFX69579.1
gene_biotype: protein_coding
description:
  Ketoglutarate semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108645
symbol: KFX69580.1
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DapA family.


ensembl_gene_id: TMS3_0108650
symbol: KFX69581.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the proline racemase family.


ensembl_gene_id: TMS3_0108660
symbol: KFX69583.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108695
symbol: KFX69590.1
gene_biotype: protein_coding
description:
  D-amino acid oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108700
symbol: KFX69591.1
gene_biotype: protein_coding
description:
  Hydroxyproline-2-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the proline racemase family.


ensembl_gene_id: TMS3_0108715
symbol: KFX69594.1
gene_biotype: protein_coding
description:
  Cbb3-type cytochrome c oxidase subunit I; CcoN; FixN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108740
symbol: KFX69599.1
gene_biotype: protein_coding
description:
  RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family.


ensembl_gene_id: TMS3_0108745
symbol: KFX69600.1
gene_biotype: protein_coding
description:
  Dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108795
symbol: KFX69610.1
gene_biotype: protein_coding
description:
  Integral membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108800
symbol: sbcB
gene_biotype: protein_coding
description:
  Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108805
symbol: KFX69612.1
gene_biotype: protein_coding
description:
  H-NS histone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108830
symbol: KFX69616.1
gene_biotype: protein_coding
description:
  ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108835
symbol: KFX69617.1
gene_biotype: protein_coding
description:
  Beta-ketoadipyl CoA thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108840
symbol: KFX69618.1
gene_biotype: protein_coding
description:
  Polyketide cyclase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108850
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: TMS3_0108855
symbol: gcvT
gene_biotype: protein_coding
description:
  Glycine cleavage system protein T; Catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108880
symbol: gcvH-2
gene_biotype: protein_coding
description:
  Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.


ensembl_gene_id: TMS3_0108885
symbol: KFX69626.1
gene_biotype: protein_coding
description:
  Type V secretory pathway, adhesin AidA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108905
symbol: KFX69630.1
gene_biotype: protein_coding
description:
  Amino acid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.


ensembl_gene_id: TMS3_0108910
symbol: pdhA
gene_biotype: protein_coding
description:
  ABC transporter permease; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). It contains multiple copies of three enzymatic components: pyruvate dehydrogenase (E1), dihydrolipoamide acetyltransferase (E2) and lipoamide dehydrogenase (E3).


ensembl_gene_id: TMS3_0108915
symbol: KFX69632.1
gene_biotype: protein_coding
description:
  2-oxoisovalerate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108920
symbol: KFX69633.1
gene_biotype: protein_coding
description:
  Branched-chain alpha-keto acid dehydrogenase subunit E2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108925
symbol: KFX69634.1
gene_biotype: protein_coding
description:
  Tricarballylate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108935
symbol: KFX69636.1
gene_biotype: protein_coding
description:
  Reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.


ensembl_gene_id: TMS3_0108955
symbol: KFX69640.1
gene_biotype: protein_coding
description:
  Fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108960
symbol: KFX69641.1
gene_biotype: protein_coding
description:
  Sugar dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108965
symbol: KFX69642.1
gene_biotype: protein_coding
description:
  Chloramphenicol resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0108985
symbol: KFX69646.1
gene_biotype: protein_coding
description:
  DNA helicase RuvA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109030
symbol: KFX69654.1
gene_biotype: protein_coding
description:
  Acetaldehyde dehydrogenase; Catalyzes the conversion of acetaldehyde to acetyl-CoA, using NAD(+) and coenzyme A. Is the final enzyme in the meta-cleavage pathway for the degradation of aromatic compounds.


ensembl_gene_id: TMS3_0109035
symbol: KFX69655.1
gene_biotype: protein_coding
description:
  4-hyroxy-2-oxovalerate aldolase; Catalyzes the retro-aldol cleavage of 4-hydroxy-2- oxopentanoate to pyruvate and acetaldehyde. Is involved in the meta- cleavage pathway for the degradation of aromatic compounds. Belongs to the 4-hydroxy-2-oxovalerate aldolase family.


ensembl_gene_id: TMS3_0109040
symbol: KFX69656.1
gene_biotype: protein_coding
description:
  2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109045
symbol: KFX69657.1
gene_biotype: protein_coding
description:
  Flavin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109080
symbol: KFX69662.1
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CobT; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109085
symbol: KFX69663.1
gene_biotype: protein_coding
description:
  Cobalamin biosynthesis protein CobS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109105
symbol: KFX69667.1
gene_biotype: protein_coding
description:
  FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.


ensembl_gene_id: TMS3_0109130
symbol: KFX69672.1
gene_biotype: protein_coding
description:
  Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.


ensembl_gene_id: TMS3_0109135
symbol: KFX69673.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron-sulfur dependent L-serine dehydratase family.


ensembl_gene_id: TMS3_0109145
symbol: KFX69675.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit delta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109150
symbol: KFX69676.1
gene_biotype: protein_coding
description:
  Class V aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109165
symbol: tauB
gene_biotype: protein_coding
description:
  Taurine ABC transporter ATP-binding protein; Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Taurine importer (TC 3.A.1.17.1) family.


ensembl_gene_id: TMS3_0109175
symbol: KFX69680.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GcvT family.


ensembl_gene_id: TMS3_0109200
symbol: KFX69685.1
gene_biotype: protein_coding
description:
  Choline dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109220
symbol: KFX69689.1
gene_biotype: protein_coding
description:
  Taurine--pyruvate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: TMS3_0109225
symbol: KFX69690.1
gene_biotype: protein_coding
description:
  2-aminoadipate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109235
symbol: KFX69692.1
gene_biotype: protein_coding
description:
  Sulfoacetaldehyde acetyltransferase; Catalyzes the formation of acetyl phosphate and sulfite from 2-sulfoacetaldehyde; is active when grown on taurine as a sole carbon source; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.


ensembl_gene_id: TMS3_0109240
symbol: KFX69693.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of acetyl phosphate from acetyl-CoA and phosphate; can also act with other short-chain acyl-CoAs; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109270
symbol: KFX69699.1
gene_biotype: protein_coding
description:
  RNA polymerase subunit sigma-24; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: TMS3_0109320
symbol: KFX69707.1
gene_biotype: protein_coding
description:
  PsiE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the PsiE family.


ensembl_gene_id: TMS3_0109350
symbol: KFX69713.1
gene_biotype: protein_coding
description:
  Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: TMS3_0109355
symbol: KFX69714.1
gene_biotype: protein_coding
description:
  5,10-methylene tetrahydromethanopterin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109370
symbol: KFX69717.1
gene_biotype: protein_coding
description:
  Peptide-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109380
symbol: gfa
gene_biotype: protein_coding
description:
  Glutathione-dependent formaldehyde-activating protein; Catalyzes the condensation of formaldehyde and glutathione to S-hydroxymethylglutathione; Belongs to the Gfa family.


ensembl_gene_id: TMS3_0109405
symbol: KFX69724.1
gene_biotype: protein_coding
description:
  Pirin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pirin family.


ensembl_gene_id: TMS3_0109420
symbol: KFX69727.1
gene_biotype: protein_coding
description:
  Cation-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109450
symbol: KFX69733.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mannose-6-phosphate isomerase type 2 family.


ensembl_gene_id: TMS3_0109470
symbol: algL
gene_biotype: protein_coding
description:
  poly(beta-D-mannuronate) lyase; Catalyzes the depolymerization of alginate by cleaving the beta-1,4 glycosidic bond between two adjacent sugar residues via a beta-elimination mechanism; Belongs to the polysaccharide lyase 5 family.


ensembl_gene_id: TMS3_0109480
symbol: KFX69738.1
gene_biotype: protein_coding
description:
  poly(beta-D-mannuronate) C5 epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109485
symbol: KFX69739.1
gene_biotype: protein_coding
description:
  Alginate regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109490
symbol: KFX69740.1
gene_biotype: protein_coding
description:
  Alginate biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109510
symbol: KFX69744.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0246 family.


ensembl_gene_id: TMS3_0109515
symbol: KFX69745.1
gene_biotype: protein_coding
description:
  Cobalt transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109525
symbol: moaC
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: TMS3_0109530
symbol: KFX69748.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoaD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109535
symbol: KFX69749.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoaE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109545
symbol: KFX69751.1
gene_biotype: protein_coding
description:
  CopG family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109580
symbol: KFX69757.1
gene_biotype: protein_coding
description:
  LuxR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109585
symbol: KFX69758.1
gene_biotype: protein_coding
description:
  Ethanolamine utilization protein EutH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109615
symbol: KFX69764.1
gene_biotype: protein_coding
description:
  Ornithine cyclodeaminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109625
symbol: rhlB
gene_biotype: protein_coding
description:
  Hypothetical protein; DEAD-box RNA helicase involved in RNA degradation. Has RNA- dependent ATPase activity and unwinds double-stranded RNA. Belongs to the DEAD box helicase family. RhlB subfamily.


ensembl_gene_id: TMS3_0109635
symbol: KFX69768.1
gene_biotype: protein_coding
description:
  Carboxylesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109640
symbol: KFX69769.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: TMS3_0109645
symbol: KFX69770.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109665
symbol: KFX69774.1
gene_biotype: protein_coding
description:
  Ketosteroid isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109670
symbol: KFX69775.1
gene_biotype: protein_coding
description:
  GIY-YIG nuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109685
symbol: KFX69778.1
gene_biotype: protein_coding
description:
  Nucleoid-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109695
symbol: KFX69780.1
gene_biotype: protein_coding
description:
  Transporter; Uncharacterized member of the APC superfamily of amino acid transporters; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109705
symbol: sbcD
gene_biotype: protein_coding
description:
  Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: TMS3_0109710
symbol: KFX69783.1
gene_biotype: protein_coding
description:
  Chromosome segregation protein SMC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109735
symbol: KFX69787.1
gene_biotype: protein_coding
description:
  Cation transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: TMS3_0109740
symbol: KFX69788.1
gene_biotype: protein_coding
description:
  Glycosyl hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109755
symbol: KFX69790.1
gene_biotype: protein_coding
description:
  SNARE associated Golgi protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109775
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: TMS3_0109780
symbol: KFX69794.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit chi; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109790
symbol: pepA
gene_biotype: protein_coding
description:
  Cytosol aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: TMS3_0109805
symbol: KFX69799.1
gene_biotype: protein_coding
description:
  RDD domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109810
symbol: KFX69800.1
gene_biotype: protein_coding
description:
  Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109820
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine tRNA ribosyltransferase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: TMS3_0109825
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: TMS3_0109830
symbol: yajC
gene_biotype: protein_coding
description:
  Preprotein translocase subunit YajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: TMS3_0109835
symbol: secD
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: TMS3_0109840
symbol: secF
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: TMS3_0109845
symbol: KFX69806.1
gene_biotype: protein_coding
description:
  Outer membrane lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109850
symbol: KFX69807.1
gene_biotype: protein_coding
description:
  Inositol monophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the inositol monophosphatase superfamily.


ensembl_gene_id: TMS3_0109855
symbol: trmJ
gene_biotype: protein_coding
description:
  RNA methyltransferase; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: TMS3_0109860
symbol: KFX69809.1
gene_biotype: protein_coding
description:
  Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109865
symbol: KFX69810.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates the transcription of several operons and genes involved in the biogenesis of Fe-S clusters and Fe-S-containing proteins.


ensembl_gene_id: TMS3_0109870
symbol: iscS
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins.


ensembl_gene_id: TMS3_0109875
symbol: KFX69812.1
gene_biotype: protein_coding
description:
  Scaffolding protein; A scaffold on which IscS assembles Fe-S clusters. It is likely that Fe-S cluster coordination is flexible as the role of this complex is to build and then hand off Fe-S clusters.


ensembl_gene_id: TMS3_0109880
symbol: iscA
gene_biotype: protein_coding
description:
  Iron-sulfur cluster assembly protein; Is able to transfer iron-sulfur clusters to apo-ferredoxin. Multiple cycles of [2Fe2S] cluster formation and transfer are observed, suggesting that IscA acts catalytically. Recruits intracellular free iron so as to provide iron for the assembly of transient iron-sulfur cluster in IscU in the presence of IscS, L-cysteine and the thioredoxin reductase system; Belongs to the HesB/IscA family.


ensembl_gene_id: TMS3_0109885
symbol: hscB
gene_biotype: protein_coding
description:
  Co-chaperone HscB; Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA; Belongs to the HscB family.


ensembl_gene_id: TMS3_0109890
symbol: hscA
gene_biotype: protein_coding
description:
  Chaperone protein HscA; Chaperone involved in the maturation of iron-sulfur cluster- containing proteins. Has a low intrinsic ATPase activity which is markedly stimulated by HscB.


ensembl_gene_id: TMS3_0109905
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: TMS3_0109910
symbol: rlmN
gene_biotype: protein_coding
description:
  50S rRNA methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs. m2A2503 modification seems to play a crucial role in the proofreading step occurring at the peptidyl transferase center and thus would serve to optimize ribosomal fidelity; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: TMS3_0109915
symbol: KFX69820.1
gene_biotype: protein_coding
description:
  Pilus assembly protein PilW; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109925
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: TMS3_0109930
symbol: hisS
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109940
symbol: bamB
gene_biotype: protein_coding
description:
  Dehydrogenase; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane.


ensembl_gene_id: TMS3_0109945
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: TMS3_0109960
symbol: leuA-2
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 2 subfamily.


ensembl_gene_id: TMS3_0109965
symbol: KFX69830.1
gene_biotype: protein_coding
description:
  Mechanosensitive ion channel protein MscS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109975
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: TMS3_0109980
symbol: KFX69833.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0109985
symbol: guaB
gene_biotype: protein_coding
description:
  Inosine-5-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: TMS3_0109995
symbol: KFX69836.1
gene_biotype: protein_coding
description:
  Copper oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110000
symbol: tadA
gene_biotype: protein_coding
description:
  Zinc-binding protein; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: TMS3_0110005
symbol: mltF
gene_biotype: protein_coding
description:
  Murein transglycosylase; Murein-degrading enzyme that degrades murein glycan strands and insoluble, high-molecular weight murein sacculi, with the concomitant formation of a 1,6-anhydromuramoyl product. Lytic transglycosylases (LTs) play an integral role in the metabolism of the peptidoglycan (PG) sacculus. Their lytic action creates space within the PG sacculus to allow for its expansion as well as for the insertion of various structures such as secretion systems and flagella.


ensembl_gene_id: TMS3_0110010
symbol: purL
gene_biotype: protein_coding
description:
  Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.


ensembl_gene_id: TMS3_0110015
symbol: KFX69840.1
gene_biotype: protein_coding
description:
  NGG1p interacting factor 3 protein, NIF3; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110020
symbol: KFX69841.1
gene_biotype: protein_coding
description:
  ErfK/YbiS/YcfS/YnhG family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110025
symbol: KFX69842.1
gene_biotype: protein_coding
description:
  ADP-ribose pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110040
symbol: KFX69845.1
gene_biotype: protein_coding
description:
  Fe-S protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110045
symbol: purT
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family.


ensembl_gene_id: TMS3_0110050
symbol: KFX69847.1
gene_biotype: protein_coding
description:
  Lysophospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110060
symbol: KFX69849.1
gene_biotype: protein_coding
description:
  Cytochrome C assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110065
symbol: ffh
gene_biotype: protein_coding
description:
  RNA-binding protein; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components; Belongs to t [...]


ensembl_gene_id: TMS3_0110070
symbol: rpsP
gene_biotype: protein_coding
description:
  30S ribosomal protein S16; Binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family.


ensembl_gene_id: TMS3_0110075
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: TMS3_0110080
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: TMS3_0110085
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: TMS3_0110090
symbol: KFX69855.1
gene_biotype: protein_coding
description:
  Cytochrome C oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110100
symbol: xerD
gene_biotype: protein_coding
description:
  Tyrosine recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: TMS3_0110105
symbol: KFX69857.1
gene_biotype: protein_coding
description:
  Protein-disulfide isomerase; Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process; Belongs to the thioredoxin family. DsbC subfamily.


ensembl_gene_id: TMS3_0110110
symbol: KFX69858.1
gene_biotype: protein_coding
description:
  Homoserine dehydrogenase; Catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110115
symbol: KFX69859.1
gene_biotype: protein_coding
description:
  Threonine synthase; Catalyzes the formation of L-threonine from O-phospho-L-homoserine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110120
symbol: KFX69860.1
gene_biotype: protein_coding
description:
  Sugar phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110125
symbol: KFX69861.1
gene_biotype: protein_coding
description:
  Deoxyribonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110140
symbol: KFX69864.1
gene_biotype: protein_coding
description:
  ssDNA exonuclease RecJ; 5'-3' single-stranded-DNA-specific exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110155
symbol: KFX69867.1
gene_biotype: protein_coding
description:
  Gamma-aminobutyraldehyde dehydrogenase; Catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aldehyde dehydrogenase family.


ensembl_gene_id: TMS3_0110170
symbol: KFX69870.1
gene_biotype: protein_coding
description:
  Polyamine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: TMS3_0110180
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: TMS3_0110185
symbol: lysS
gene_biotype: protein_coding
description:
  lysyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: TMS3_0110215
symbol: KFX69879.1
gene_biotype: protein_coding
description:
  Pilin assembly protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110220
symbol: ppc
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family.


ensembl_gene_id: TMS3_0110225
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: TMS3_0110230
symbol: KFX69882.1
gene_biotype: protein_coding
description:
  Phosphorylcholine phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110235
symbol: KFX69883.1
gene_biotype: protein_coding
description:
  Peptidase M22; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110260
symbol: KFX69887.1
gene_biotype: protein_coding
description:
  Dimethylallyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110280
symbol: KFX69891.1
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DapA family.


ensembl_gene_id: TMS3_0110350
symbol: KFX69904.1
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110355
symbol: KFX69905.1
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110360
symbol: proX
gene_biotype: protein_coding
description:
  Glycine/betaine ABC transporter substrate-binding protein; With ProVW, part of the high-affinity transport system for the osmoprotectant glycine betaine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110380
symbol: KFX69909.1
gene_biotype: protein_coding
description:
  Transcriptional regulatory protein AruR; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110420
symbol: KFX69915.1
gene_biotype: protein_coding
description:
  2-methylisocitrate lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110425
symbol: KFX69916.1
gene_biotype: protein_coding
description:
  Extensin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110430
symbol: rsmJ
gene_biotype: protein_coding
description:
  SAM-dependent methyltransferase; Specifically methylates the guanosine in position 1516 of 16S rRNA.


ensembl_gene_id: TMS3_0110445
symbol: KFX69920.1
gene_biotype: protein_coding
description:
  Multidrug transporter AcrB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: TMS3_0110465
symbol: dsdA
gene_biotype: protein_coding
description:
  D-serine dehydratase; Catalyzes the formation of pyruvate from serine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the serine/threonine dehydratase family. DsdA subfamily.


ensembl_gene_id: TMS3_0110480
symbol: KFX69927.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0149 family.


ensembl_gene_id: TMS3_0110495
symbol: plsB
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GPAT/DAPAT family.


ensembl_gene_id: TMS3_0110525
symbol: KFX69935.1
gene_biotype: protein_coding
description:
  SAM-dependent methlyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110530
symbol: dapE
gene_biotype: protein_coding
description:
  Succinyl-diaminopimelate desuccinylase; Catalyzes the hydrolysis of N-succinyl-L,L-diaminopimelic acid (SDAP), forming succinate and LL-2,6-diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls; Belongs to the peptidase M20A family. DapE subfamily.


ensembl_gene_id: TMS3_0110535
symbol: KFX69937.1
gene_biotype: protein_coding
description:
  Beta-(1-3)-glucosyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110540
symbol: KFX69938.1
gene_biotype: protein_coding
description:
  Aldehyde reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110545
symbol: KFX69939.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110555
symbol: KFX69941.1
gene_biotype: protein_coding
description:
  Fe-S metabolism protein SufE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110560
symbol: KFX69942.1
gene_biotype: protein_coding
description:
  Cysteine sulfinate desulfinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110565
symbol: dapD
gene_biotype: protein_coding
description:
  2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2-amino-6-oxopimelate using succinyl-CoA.


ensembl_gene_id: TMS3_0110570
symbol: KFX69944.1
gene_biotype: protein_coding
description:
  ArsC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ArsC family.


ensembl_gene_id: TMS3_0110575
symbol: KFX69945.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of succinyldiaminopimelate from N-succinyl-2-amino-6-ketopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110580
symbol: glnD
gene_biotype: protein_coding
description:
  protein-PII uridylyltransferase; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen metabolism.


ensembl_gene_id: TMS3_0110585
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: TMS3_0110590
symbol: rpsB
gene_biotype: protein_coding
description:
  30S ribosomal protein S2; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the universal ribosomal protein uS2 family.


ensembl_gene_id: TMS3_0110595
symbol: tsf
gene_biotype: protein_coding
description:
  Elongation factor Ts; Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: TMS3_0110605
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome-recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: TMS3_0110610
symbol: uppS
gene_biotype: protein_coding
description:
  Farnesyl-diphosphate synthase; Catalyzes the sequential condensation of isopentenyl diphosphate (IPP) with (2E,6E)-farnesyl diphosphate (E,E-FPP) to yield (2Z,6Z,10Z,14Z,18Z,22Z,26Z,30Z,34E,38E)-undecaprenyl diphosphate (di- trans,octa-cis-UPP). UPP is the precursor of glycosyl carrier lipid in the biosynthesis of bacterial cell wall polysaccharide components such as peptidoglycan and lipopolysaccharide.


ensembl_gene_id: TMS3_0110615
symbol: KFX69953.1
gene_biotype: protein_coding
description:
  Phosphatidate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDS family.


ensembl_gene_id: TMS3_0110620
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: TMS3_0110625
symbol: KFX69955.1
gene_biotype: protein_coding
description:
  Zinc metallopeptidase RseP; Catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110640
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: TMS3_0110645
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-ACP dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: TMS3_0110650
symbol: lpxA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: TMS3_0110655
symbol: lpxB
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: TMS3_0110670
symbol: KFX69964.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110675
symbol: accA
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA.


ensembl_gene_id: TMS3_0110680
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthetase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: TMS3_0110685
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: TMS3_0110690
symbol: kdsA
gene_biotype: protein_coding
description:
  2-dehydro-3-deoxyphosphooctonate aldolase; Catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the KdsA family.


ensembl_gene_id: TMS3_0110695
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.


ensembl_gene_id: TMS3_0110700
symbol: ftsB
gene_biotype: protein_coding
description:
  Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: TMS3_0110705
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP).


ensembl_gene_id: TMS3_0110720
symbol: KFX69973.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione; also catalyzes the formation of aldehyde or ketone from alcohols; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.


ensembl_gene_id: TMS3_0110730
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: TMS3_0110735
symbol: truD
gene_biotype: protein_coding
description:
  Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.


ensembl_gene_id: TMS3_0110740
symbol: surE
gene_biotype: protein_coding
description:
  Stationary phase survival protein SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: TMS3_0110745
symbol: pcm
gene_biotype: protein_coding
description:
  protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.


ensembl_gene_id: TMS3_0110755
symbol: KFX69980.1
gene_biotype: protein_coding
description:
  Peptigoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110760
symbol: rpoS
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response.


ensembl_gene_id: TMS3_0110765
symbol: KFX69982.1
gene_biotype: protein_coding
description:
  Ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: TMS3_0110770
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: TMS3_0110775
symbol: KFX69984.1
gene_biotype: protein_coding
description:
  Sterol desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110790
symbol: KFX69987.1
gene_biotype: protein_coding
description:
  Response regulator in two-component regulatory system with CusS; regulates the copper efflux system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110800
symbol: KFX69989.1
gene_biotype: protein_coding
description:
  Plastocyanin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110810
symbol: KFX69991.1
gene_biotype: protein_coding
description:
  Copper ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110825
symbol: KFX69994.1
gene_biotype: protein_coding
description:
  Heavy metal transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110845
symbol: KFX69996.1
gene_biotype: protein_coding
description:
  Copper resistance protein CopB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110850
symbol: KFX69997.1
gene_biotype: protein_coding
description:
  Cystathionine gamma-lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110865
symbol: KFX70000.1
gene_biotype: protein_coding
description:
  Damage-inducible protein CinA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CinA family.


ensembl_gene_id: TMS3_0110870
symbol: recA
gene_biotype: protein_coding
description:
  Recombinase RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: TMS3_0110880
symbol: KFX70003.1
gene_biotype: protein_coding
description:
  Cytochrome D ubiquinol oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110890
symbol: KFX70005.1
gene_biotype: protein_coding
description:
  Xylulose 5-phosphate 3-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110905
symbol: KFX70008.1
gene_biotype: protein_coding
description:
  DTW protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110920
symbol: KFX70011.1
gene_biotype: protein_coding
description:
  Diacylglycerol kinase; Recycling of diacylglycerol produced during the turnover of membrane phospholipid.


ensembl_gene_id: TMS3_0110940
symbol: KFX70015.1
gene_biotype: protein_coding
description:
  Antibiotic biosynthesis monooxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110945
symbol: KFX70016.1
gene_biotype: protein_coding
description:
  S-adenosylmethionine-dependent methyltransferase RcsF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110960
symbol: KFX70019.1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110970
symbol: KFX70021.1
gene_biotype: protein_coding
description:
  RNA-binding protein S4; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110980
symbol: livG
gene_biotype: protein_coding
description:
  Leucine/isoleucine/valine transporter ATP-binding subunit; Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0110985
symbol: livM
gene_biotype: protein_coding
description:
  Leucine/isoleucine/valine transporter permease subunit; Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: TMS3_0110995
symbol: KFX70026.1
gene_biotype: protein_coding
description:
  Leucine ABC transporter substrate-binding protein; With LivFGHM is involved in the high affinity leucine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111005
symbol: KFX70028.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase alpha subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111010
symbol: KFX70029.1
gene_biotype: protein_coding
description:
  Phosphonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111020
symbol: phnC
gene_biotype: protein_coding
description:
  Phosphonate ABC transporter; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.


ensembl_gene_id: TMS3_0111025
symbol: KFX70032.1
gene_biotype: protein_coding
description:
  Phosphonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111030
symbol: KFX70033.1
gene_biotype: protein_coding
description:
  2-hydroxy-3-oxopropionate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111035
symbol: KFX70034.1
gene_biotype: protein_coding
description:
  Hydroxypyruvate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the hyi family.


ensembl_gene_id: TMS3_0111050
symbol: rapA
gene_biotype: protein_coding
description:
  RNA polymerase-associated protein RapA; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily.


ensembl_gene_id: TMS3_0111060
symbol: KFX70038.1
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111065
symbol: KFX70039.1
gene_biotype: protein_coding
description:
  DNA repair protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111075
symbol: KFX70040.1
gene_biotype: protein_coding
description:
  ATP-dependent helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111080
symbol: KFX70041.1
gene_biotype: protein_coding
description:
  Acyltransferase superfamily protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111085
symbol: KFX70042.1
gene_biotype: protein_coding
description:
  Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111090
symbol: KFX70043.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: TMS3_0111105
symbol: KFX70046.1
gene_biotype: protein_coding
description:
  3-phosphoglycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111110
symbol: azoR
gene_biotype: protein_coding
description:
  FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.


ensembl_gene_id: TMS3_0111150
symbol: KFX70055.1
gene_biotype: protein_coding
description:
  Sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111160
symbol: KFX70057.1
gene_biotype: protein_coding
description:
  GntR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CvfB family.


ensembl_gene_id: TMS3_0111175
symbol: KFX70059.1
gene_biotype: protein_coding
description:
  Allantoin permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111185
symbol: KFX70061.1
gene_biotype: protein_coding
description:
  Hydantoinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111190
symbol: KFX70062.1
gene_biotype: protein_coding
description:
  5-oxoprolinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111200
symbol: KFX70064.1
gene_biotype: protein_coding
description:
  Regulator of gab gene expression; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111205
symbol: glaH
gene_biotype: protein_coding
description:
  Hypothetical protein; Acts as an alpha-ketoglutarate-dependent dioxygenase catalyzing hydroxylation of glutarate (GA) to L-2-hydroxyglutarate (L2HG). Functions in a L-lysine degradation pathway that proceeds via cadaverine, glutarate and L-2-hydroxyglutarate.


ensembl_gene_id: TMS3_0111210
symbol: KFX70066.1
gene_biotype: protein_coding
description:
  Hydroxyglutarate oxidase; Catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111245
symbol: msrA-2
gene_biotype: protein_coding
description:
  methionine-S-sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: TMS3_0111250
symbol: KFX70073.1
gene_biotype: protein_coding
description:
  Methionine sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111275
symbol: KFX70076.1
gene_biotype: protein_coding
description:
  Phosphoprotein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111280
symbol: KFX70077.1
gene_biotype: protein_coding
description:
  Protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111320
symbol: KFX70084.1
gene_biotype: protein_coding
description:
  Universal stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111345
symbol: KFX70088.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; Rotamase C; accelerates isomerization of the peptidyl prolyl bond; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111360
symbol: KFX70091.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111380
symbol: KFX70095.1
gene_biotype: protein_coding
description:
  Allergen V5/Tpx-1 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111420
symbol: KFX70100.1
gene_biotype: protein_coding
description:
  Ribonucleotide-diphosphate reductase subunit beta; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides; Belongs to the ribonucleoside diphosphate reductase small chain family.


ensembl_gene_id: TMS3_0111425
symbol: KFX70101.1
gene_biotype: protein_coding
description:
  Ribonucleotide-diphosphate reductase subunit alpha; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides.


ensembl_gene_id: TMS3_0111440
symbol: KFX70104.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: TMS3_0111445
symbol: KFX70105.1
gene_biotype: protein_coding
description:
  Heat-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: TMS3_0111450
symbol: KFX70106.1
gene_biotype: protein_coding
description:
  Heat shock Hsp20; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the small heat shock protein (HSP20) family.


ensembl_gene_id: TMS3_0111455
symbol: KFX70107.1
gene_biotype: protein_coding
description:
  Pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: TMS3_0111460
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: TMS3_0111465
symbol: KFX70109.1
gene_biotype: protein_coding
description:
  ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111470
symbol: minC
gene_biotype: protein_coding
description:
  Septum formation inhibitor; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: TMS3_0111475
symbol: lpxL
gene_biotype: protein_coding
description:
  Lipid A biosynthesis lauroyl acyltransferase; Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)-(lauroyl)-lipid IV(A).


ensembl_gene_id: TMS3_0111480
symbol: KFX70112.1
gene_biotype: protein_coding
description:
  Patatin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111485
symbol: argD
gene_biotype: protein_coding
description:
  Acetylornithine aminotransferase; DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: TMS3_0111490
symbol: KFX70114.1
gene_biotype: protein_coding
description:
  Arginine N-succinyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111500
symbol: astD
gene_biotype: protein_coding
description:
  Succinylglutamate-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.


ensembl_gene_id: TMS3_0111505
symbol: astB
gene_biotype: protein_coding
description:
  N-succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2).


ensembl_gene_id: TMS3_0111510
symbol: KFX70118.1
gene_biotype: protein_coding
description:
  Topoisomerase II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111515
symbol: astE
gene_biotype: protein_coding
description:
  Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily.


ensembl_gene_id: TMS3_0111520
symbol: KFX70120.1
gene_biotype: protein_coding
description:
  Threonine aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111525
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: TMS3_0111530
symbol: KFX70122.1
gene_biotype: protein_coding
description:
  Aspartate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartokinase family.


ensembl_gene_id: TMS3_0111535
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s).


ensembl_gene_id: TMS3_0111565
symbol: oadG
gene_biotype: protein_coding
description:
  Oxaloacetate decarboxylase; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation.


ensembl_gene_id: TMS3_0111570
symbol: KFX70127.1
gene_biotype: protein_coding
description:
  Oxaloacetate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111575
symbol: KFX70128.1
gene_biotype: protein_coding
description:
  glutaconyl-CoA decarboxylase subunit beta; Catalyzes the decarboxylation of oxaloacetate coupled to Na(+) translocation; Belongs to the GcdB/MmdB/OadB family.


ensembl_gene_id: TMS3_0111585
symbol: phnC-2
gene_biotype: protein_coding
description:
  Phosphonate/organophosphate ester transporter subunit; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.


ensembl_gene_id: TMS3_0111590
symbol: KFX70131.1
gene_biotype: protein_coding
description:
  Alkylphosphonate ABC transporter substrate-binding protein; With PhnCE is involved in the transport of phosphonates; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111605
symbol: KFX70134.1
gene_biotype: protein_coding
description:
  Phosphonate metabolism PhnG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111610
symbol: KFX70135.1
gene_biotype: protein_coding
description:
  Carbon-phosphorus lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111615
symbol: KFX70136.1
gene_biotype: protein_coding
description:
  Carbon-phosphorus lyase complex subunit PhnI; Required for the use of phosphonate and phosphite; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111620
symbol: KFX70137.1
gene_biotype: protein_coding
description:
  Carbon-phosphorus lyase; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.


ensembl_gene_id: TMS3_0111625
symbol: phnK
gene_biotype: protein_coding
description:
  Phosphonate C-P lyase system protein PhnK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111635
symbol: KFX70139.1
gene_biotype: protein_coding
description:
  Phosphonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111640
symbol: KFX70140.1
gene_biotype: protein_coding
description:
  Phosphonate metabolism protein PhnM; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111645
symbol: phnN
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP).


ensembl_gene_id: TMS3_0111660
symbol: KFX70144.1
gene_biotype: protein_coding
description:
  Indolepyruvate ferredoxin oxidoreductase; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111670
symbol: KFX70146.1
gene_biotype: protein_coding
description:
  Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.


ensembl_gene_id: TMS3_0111685
symbol: sstT
gene_biotype: protein_coding
description:
  Serine/threonine protein kinase; Involved in the import of serine and threonine into the cell, with the concomitant import of sodium (symport system). Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: TMS3_0111690
symbol: KFX70148.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0502 family.


ensembl_gene_id: TMS3_0111700
symbol: KFX70150.1
gene_biotype: protein_coding
description:
  Glutamate--ammonia ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamine synthetase family.


ensembl_gene_id: TMS3_0111725
symbol: KFX70155.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111730
symbol: KFX70156.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis anti-sigma factor FlgM; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111735
symbol: KFX70157.1
gene_biotype: protein_coding
description:
  Flagellar basal body P-ring biosynthesis protein FlgA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111750
symbol: flgB
gene_biotype: protein_coding
description:
  Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: TMS3_0111755
symbol: KFX70161.1
gene_biotype: protein_coding
description:
  Flagellar basal body rod protein FlgC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: TMS3_0111760
symbol: KFX70162.1
gene_biotype: protein_coding
description:
  Flagellar basal body rod modification protein FlgD; Required for flagellar hook formation. May act as a scaffolding protein.


ensembl_gene_id: TMS3_0111765
symbol: KFX70163.1
gene_biotype: protein_coding
description:
  Flagellar hook protein FlgE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111770
symbol: flgF
gene_biotype: protein_coding
description:
  Flagellar basal body rod protein FlgF; FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111775
symbol: flgG
gene_biotype: protein_coding
description:
  Makes up the distal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111780
symbol: flgH
gene_biotype: protein_coding
description:
  Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: TMS3_0111785
symbol: flgI
gene_biotype: protein_coding
description:
  Flagellar P-ring protein FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: TMS3_0111790
symbol: KFX70168.1
gene_biotype: protein_coding
description:
  Flagellar rod assembly protein FlgJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111795
symbol: flgK
gene_biotype: protein_coding
description:
  With FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the flagella basal body rod proteins family.


ensembl_gene_id: TMS3_0111800
symbol: KFX70170.1
gene_biotype: protein_coding
description:
  Flagellar hook protein FlgL; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111805
symbol: KFX70171.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate cytidylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111810
symbol: KFX70172.1
gene_biotype: protein_coding
description:
  CDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111815
symbol: KFX70173.1
gene_biotype: protein_coding
description:
  Lipopolysaccharide biosynthesis protein RfbH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: TMS3_0111820
symbol: KFX70174.1
gene_biotype: protein_coding
description:
  Spore coat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111825
symbol: KFX70175.1
gene_biotype: protein_coding
description:
  Acetolactate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.


ensembl_gene_id: TMS3_0111835
symbol: KFX70177.1
gene_biotype: protein_coding
description:
  Methyltransferase type 12; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111860
symbol: KFX70181.1
gene_biotype: protein_coding
description:
  Glycosyl transferase family 2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111870
symbol: KFX70183.1
gene_biotype: protein_coding
description:
  Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: TMS3_0111880
symbol: KFX70185.1
gene_biotype: protein_coding
description:
  A-type flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: TMS3_0111885
symbol: KFX70186.1
gene_biotype: protein_coding
description:
  A-type flagellar protein fliS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111890
symbol: KFX70187.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111895
symbol: KFX70188.1
gene_biotype: protein_coding
description:
  Flagellar assembly protein FliT; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111915
symbol: fliE
gene_biotype: protein_coding
description:
  Flagellar hook-basal body protein FliE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111920
symbol: KFX70193.1
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: TMS3_0111925
symbol: KFX70194.1
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliG; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.


ensembl_gene_id: TMS3_0111930
symbol: KFX70195.1
gene_biotype: protein_coding
description:
  Flagellar assembly protein FliH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111935
symbol: fliI
gene_biotype: protein_coding
description:
  ATP synthase; Involved in type III protein export during flagellum assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111940
symbol: KFX70197.1
gene_biotype: protein_coding
description:
  Flagellar biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111945
symbol: KFX70198.1
gene_biotype: protein_coding
description:
  Anti-anti-sigma factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111970
symbol: KFX70203.1
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.


ensembl_gene_id: TMS3_0111980
symbol: KFX70204.1
gene_biotype: protein_coding
description:
  Flagellar assembly protein FliO; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0111985
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein flip; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: TMS3_0111990
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: TMS3_0111995
symbol: KFX70207.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: TMS3_0112000
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: TMS3_0112005
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: TMS3_0112010
symbol: flhF
gene_biotype: protein_coding
description:
  Positive regulator of class III flagellar genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112015
symbol: KFX70211.1
gene_biotype: protein_coding
description:
  Cobyrinic acid a,c-diamide synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112020
symbol: fliA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.


ensembl_gene_id: TMS3_0112030
symbol: KFX70214.1
gene_biotype: protein_coding
description:
  Protein phosphatase; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).


ensembl_gene_id: TMS3_0112040
symbol: cheB-2
gene_biotype: protein_coding
description:
  Chemotaxis protein CheY; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: TMS3_0112045
symbol: motC
gene_biotype: protein_coding
description:
  Flagellar motor protein; Homologous to MotA; this protein with a related protein (a MotB homolog) forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; either MotAB or MotCD is sufficient for swimming, but both are necessary for swarming motility; these organisms have both MotA and MotC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112080
symbol: KFX70223.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112085
symbol: KFX70224.1
gene_biotype: protein_coding
description:
  Flagellar hook-length control protein FliK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112090
symbol: ccmA
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein CcmA; Part of the ABC transporter complex CcmAB involved in the biogenesis of c-type cytochromes; once thought to export heme, this seems not to be the case, but its exact role is uncertain. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. CcmA exporter (TC 3.A.1.107) family.


ensembl_gene_id: TMS3_0112095
symbol: KFX70226.1
gene_biotype: protein_coding
description:
  Heme transporter; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmB/CycW/HelB family.


ensembl_gene_id: TMS3_0112100
symbol: ccmC
gene_biotype: protein_coding
description:
  Heme ABC transporter permease; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmC/CycZ/HelC family.


ensembl_gene_id: TMS3_0112105
symbol: KFX70228.1
gene_biotype: protein_coding
description:
  Hemagglutination activity protein; Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes; Belongs to the CcmD/CycX/HelD family.


ensembl_gene_id: TMS3_0112110
symbol: ccmE
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.


ensembl_gene_id: TMS3_0112115
symbol: KFX70230.1
gene_biotype: protein_coding
description:
  Cytochrome c-type biogenesis protein; required for the transfer of heme to apocytochrome c; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112145
symbol: KFX70236.1
gene_biotype: protein_coding
description:
  Gamma-butyrobetaine hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112170
symbol: KFX70239.1
gene_biotype: protein_coding
description:
  Diamine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112185
symbol: KFX70241.1
gene_biotype: protein_coding
description:
  Competence protein ComEA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112195
symbol: KFX70242.1
gene_biotype: protein_coding
description:
  Aromatic amino acid aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112200
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: TMS3_0112205
symbol: KFX70244.1
gene_biotype: protein_coding
description:
  DSBA oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the major facilitator superfamily.


ensembl_gene_id: TMS3_0112220
symbol: gltX
gene_biotype: protein_coding
description:
  glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu).


ensembl_gene_id: TMS3_0112260
symbol: dusC
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase C; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily.


ensembl_gene_id: TMS3_0112265
symbol: KFX70252.1
gene_biotype: protein_coding
description:
  Sugar dehydrogenase; Converts glucose to D-glucono-1,5 lactone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112275
symbol: KFX70254.1
gene_biotype: protein_coding
description:
  Sensory box protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112285
symbol: leuC
gene_biotype: protein_coding
description:
  Isopropylmalate isomerase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: TMS3_0112290
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: TMS3_0112295
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: TMS3_0112300
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: TMS3_0112305
symbol: KFX70260.1
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: TMS3_0112315
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: TMS3_0112320
symbol: trpF
gene_biotype: protein_coding
description:
  N-(5'-phosphoribosyl)anthranilate isomerase; Catalyzes the formation of 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate from N-(5-phospho-beta-D-ribosyl)-anthranilate in tryptophan biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TrpF family.


ensembl_gene_id: TMS3_0112325
symbol: accD
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.


ensembl_gene_id: TMS3_0112330
symbol: KFX70265.1
gene_biotype: protein_coding
description:
  Folylpolyglutamate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: TMS3_0112340
symbol: KFX70267.1
gene_biotype: protein_coding
description:
  Colicin V production CvpA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112345
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine; In the C-terminal section; belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: TMS3_0112350
symbol: metZ
gene_biotype: protein_coding
description:
  O-succinylhomoserine sulfhydrylase; Catalyzes the formation of L-homocysteine from O-succinyl-L- homoserine (OSHS) and hydrogen sulfide.


ensembl_gene_id: TMS3_0112355
symbol: KFX70270.1
gene_biotype: protein_coding
description:
  General secretion pathway protein GspD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112365
symbol: KFX70272.1
gene_biotype: protein_coding
description:
  General secretion pathway protein GspE; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.


ensembl_gene_id: TMS3_0112370
symbol: KFX70273.1
gene_biotype: protein_coding
description:
  General secretion pathway protein GspF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112375
symbol: KFX70274.1
gene_biotype: protein_coding
description:
  Secretion system protein G; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112380
symbol: KFX70275.1
gene_biotype: protein_coding
description:
  General secretion pathway protein GspH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112385
symbol: KFX70276.1
gene_biotype: protein_coding
description:
  General secretion pathway protein GspI; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112390
symbol: KFX70277.1
gene_biotype: protein_coding
description:
  General secretion pathway protein GspJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112395
symbol: KFX70278.1
gene_biotype: protein_coding
description:
  General secretion pathway protein GspK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112400
symbol: KFX70279.1
gene_biotype: protein_coding
description:
  General secretion pathway protein GspL; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.


ensembl_gene_id: TMS3_0112405
symbol: KFX70280.1
gene_biotype: protein_coding
description:
  General secretion pathway protein GspM; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112430
symbol: fadH
gene_biotype: protein_coding
description:
  2,4-dienoyl-CoA reductase; Catalyzes the formation of trans-2- enoyl-CoA from 2,4-dienoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112455
symbol: KFX70287.1
gene_biotype: protein_coding
description:
  Cobalt chelatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112460
symbol: ppnK
gene_biotype: protein_coding
description:
  Inorganic polyphosphate kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: TMS3_0112465
symbol: KFX70289.1
gene_biotype: protein_coding
description:
  Serine/threonine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112470
symbol: KFX70290.1
gene_biotype: protein_coding
description:
  Peptidase S54; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112490
symbol: KFX70294.1
gene_biotype: protein_coding
description:
  Glycine/betaine transmethylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112500
symbol: KFX70296.1
gene_biotype: protein_coding
description:
  BNR/Asp-box repeat-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112510
symbol: KFX70298.1
gene_biotype: protein_coding
description:
  Protein BatD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112520
symbol: KFX70300.1
gene_biotype: protein_coding
description:
  BatB protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112540
symbol: KFX70304.1
gene_biotype: protein_coding
description:
  Allophanate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112550
symbol: pxpA
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.


ensembl_gene_id: TMS3_0112575
symbol: KFX70310.1
gene_biotype: protein_coding
description:
  TRAP dicarboxylate transporter subunit DctQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112585
symbol: KFX70312.1
gene_biotype: protein_coding
description:
  NAD-glutamate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112615
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: TMS3_0112620
symbol: rlmL
gene_biotype: protein_coding
description:
  50S rRNA methyltransferase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family.


ensembl_gene_id: TMS3_0112625
symbol: KFX70319.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112645
symbol: KFX70323.1
gene_biotype: protein_coding
description:
  Deoxyguanosinetriphosphate triphosphohydrolase; dGTPase family type 3 subfamily, presumably hydrolyzes dGTP to deoxyguanosine and triphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112685
symbol: KFX70326.1
gene_biotype: protein_coding
description:
  Chain-length determining protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112710
symbol: KFX70329.1
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-glucosamine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: TMS3_0112730
symbol: KFX70333.1
gene_biotype: protein_coding
description:
  Aminotransferase DegT; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: TMS3_0112755
symbol: KFX70338.1
gene_biotype: protein_coding
description:
  ExsB family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112770
symbol: KFX70340.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: TMS3_0112780
symbol: KFX70342.1
gene_biotype: protein_coding
description:
  Sugar transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112825
symbol: KFX70350.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0270 family.


ensembl_gene_id: TMS3_0112835
symbol: KFX70352.1
gene_biotype: protein_coding
description:
  Peptidase M42; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112845
symbol: KFX70354.1
gene_biotype: protein_coding
description:
  Asparagine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112855
symbol: KFX70356.1
gene_biotype: protein_coding
description:
  Zn-dependent hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112860
symbol: mnmC
gene_biotype: protein_coding
description:
  FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Catalyzes the last two steps in the biosynthesis of 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at the wobble position (U34) in tRNA. Catalyzes the FAD-dependent demodification of cmnm(5)s(2)U34 to nm(5)s(2)U34, followed by the transfer of a methyl group from S-adenosyl-L-methionine to nm(5)s(2)U34, to form mnm(5)s(2)U34; In the C-terminal section; belongs to the DAO family.


ensembl_gene_id: TMS3_0112865
symbol: KFX70358.1
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112870
symbol: KFX70359.1
gene_biotype: protein_coding
description:
  acetyl-CoA acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: TMS3_0112875
symbol: KFX70360.1
gene_biotype: protein_coding
description:
  Thiolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112885
symbol: KFX70362.1
gene_biotype: protein_coding
description:
  NAD(P)H dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112890
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: TMS3_0112900
symbol: KFX69323.1
gene_biotype: protein_coding
description:
  Tartronate semialdehyde reductase; NADH-dependent; catalyzed the reversible formation of glycerate from tartronate semialdehyde; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112915
symbol: KFX69326.1
gene_biotype: protein_coding
description:
  Urea transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112920
symbol: KFX69327.1
gene_biotype: protein_coding
description:
  Ion transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112935
symbol: KFX69330.1
gene_biotype: protein_coding
description:
  Peptidase M14; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112940
symbol: KFX69331.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; With HisJPQ is involved in transport of histidine, lysine, arginine and ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112965
symbol: KFX69335.1
gene_biotype: protein_coding
description:
  Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0112995
symbol: KFX69341.1
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113000
symbol: KFX69342.1
gene_biotype: protein_coding
description:
  SCP-2 family sterol carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113025
symbol: nudC
gene_biotype: protein_coding
description:
  NADH pyrophosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family. NudC subfamily.


ensembl_gene_id: TMS3_0113030
symbol: KFX69347.1
gene_biotype: protein_coding
description:
  Ferrous iron transporter B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113035
symbol: KFX69348.1
gene_biotype: protein_coding
description:
  enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: TMS3_0113040
symbol: KFX69349.1
gene_biotype: protein_coding
description:
  Lysine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113050
symbol: KFX69351.1
gene_biotype: protein_coding
description:
  Thiamine pyrophosphate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the TPP enzyme family.


ensembl_gene_id: TMS3_0113090
symbol: KFX69359.1
gene_biotype: protein_coding
description:
  Sulfite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: TMS3_0113130
symbol: KFX69367.1
gene_biotype: protein_coding
description:
  Hemolysin III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113145
symbol: KFX69370.1
gene_biotype: protein_coding
description:
  4-aminobutyrate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: TMS3_0113165
symbol: dnaQ
gene_biotype: protein_coding
description:
  DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.


ensembl_gene_id: TMS3_0113180
symbol: gloB
gene_biotype: protein_coding
description:
  Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.


ensembl_gene_id: TMS3_0113185
symbol: KFX69377.1
gene_biotype: protein_coding
description:
  Lytic transglycosylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113205
symbol: KFX69381.1
gene_biotype: protein_coding
description:
  Microcin ABC transporter permease; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113215
symbol: KFX69383.1
gene_biotype: protein_coding
description:
  Microcin ABC transporter ATP-binding protein; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: TMS3_0113220
symbol: KFX69384.1
gene_biotype: protein_coding
description:
  enoyl-ACP reductase; Catalyzes a key regulatory step in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113245
symbol: KFX69388.1
gene_biotype: protein_coding
description:
  Transcriptional regulator HU subunit alpha; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: TMS3_0113250
symbol: lon
gene_biotype: protein_coding
description:
  DNA-binding protein; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: TMS3_0113255
symbol: clpX
gene_biotype: protein_coding
description:
  Clp protease ATP-binding protein; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: TMS3_0113260
symbol: clpP
gene_biotype: protein_coding
description:
  Clp protease ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: TMS3_0113265
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: TMS3_0113325
symbol: cysS
gene_biotype: protein_coding
description:
  cysteinyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: TMS3_0113330
symbol: glnS
gene_biotype: protein_coding
description:
  glutamate--tRNA ligase; Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113340
symbol: lpxH
gene_biotype: protein_coding
description:
  UDP-2,3-diacylglucosamine hydrolase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: TMS3_0113355
symbol: KFX69407.1
gene_biotype: protein_coding
description:
  tRNA hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113380
symbol: KFX69412.1
gene_biotype: protein_coding
description:
  Bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase; Catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aconitase/IPM isomerase family.


ensembl_gene_id: TMS3_0113385
symbol: KFX69413.1
gene_biotype: protein_coding
description:
  Nitrate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113395
symbol: KFX69415.1
gene_biotype: protein_coding
description:
  Pyridoxal-dependent decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113400
symbol: KFX69416.1
gene_biotype: protein_coding
description:
  Glutamate-pyruvate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113415
symbol: KFX69419.1
gene_biotype: protein_coding
description:
  Potassium transporter KefB; Involved in potassium efflux; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: TMS3_0113430
symbol: KFX69422.1
gene_biotype: protein_coding
description:
  Nicotinamidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113435
symbol: KFX69423.1
gene_biotype: protein_coding
description:
  Quercetin 2,3-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pirin family.


ensembl_gene_id: TMS3_0113445
symbol: KFX69425.1
gene_biotype: protein_coding
description:
  Nitrate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113450
symbol: KFX69426.1
gene_biotype: protein_coding
description:
  Nitrate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113455
symbol: KFX69427.1
gene_biotype: protein_coding
description:
  Bacitracin ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113490
symbol: KFX69434.1
gene_biotype: protein_coding
description:
  Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: TMS3_0113495
symbol: KFX69435.1
gene_biotype: protein_coding
description:
  Nitrite reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113500
symbol: KFX69436.1
gene_biotype: protein_coding
description:
  Nitrate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.


ensembl_gene_id: TMS3_0113505
symbol: KFX69437.1
gene_biotype: protein_coding
description:
  uroporphyrin-III methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the precorrin methyltransferase family.


ensembl_gene_id: TMS3_0113510
symbol: KFX69438.1
gene_biotype: protein_coding
description:
  Long-chain fatty acid--CoA ligase; Activates fatty acids by binding to coenzyme A; involved in the beta-oxidation of n-alkanoic and n-phenylalkanoic acids; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113525
symbol: KFX69441.1
gene_biotype: protein_coding
description:
  3-hydroxybutyryl-CoA dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113555
symbol: nfuA
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein; Involved in iron-sulfur cluster biogenesis. Binds a 4Fe-4S cluster, can transfer this cluster to apoproteins, and thereby intervenes in the maturation of Fe/S proteins. Could also act as a scaffold/chaperone for damaged Fe/S proteins.


ensembl_gene_id: TMS3_0113575
symbol: KFX69451.1
gene_biotype: protein_coding
description:
  Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.


ensembl_gene_id: TMS3_0113580
symbol: KFX69452.1
gene_biotype: protein_coding
description:
  Endoribonuclease L-PSP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113590
symbol: KFX69454.1
gene_biotype: protein_coding
description:
  CBS domain containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113605
symbol: KFX69457.1
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113630
symbol: KFX69462.1
gene_biotype: protein_coding
description:
  HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113635
symbol: KFX69463.1
gene_biotype: protein_coding
description:
  Periplasmic-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113690
symbol: KFX69468.1
gene_biotype: protein_coding
description:
  Peptidase M24; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113705
symbol: KFX69471.1
gene_biotype: protein_coding
description:
  Aldehyde dismutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113735
symbol: KFX69476.1
gene_biotype: protein_coding
description:
  Dipeptidyl aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113745
symbol: KFX69477.1
gene_biotype: protein_coding
description:
  ATP-dependent helicase HrpA; Involved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113770
symbol: KFX69482.1
gene_biotype: protein_coding
description:
  Peptidyl-arginine deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the agmatine deiminase family.


ensembl_gene_id: TMS3_0113785
symbol: KFX69485.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor SigX; Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; in Pseudomonas fluorescens and P. aeruginosa regulates outer membrane protein OprF expression; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: TMS3_0113795
symbol: KFX69487.1
gene_biotype: protein_coding
description:
  CrfX protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113800
symbol: KFX69488.1
gene_biotype: protein_coding
description:
  CmaX protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113805
symbol: KFX69489.1
gene_biotype: protein_coding
description:
  Ribonuclease activity regulator protein RraA; Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions.


ensembl_gene_id: TMS3_0113810
symbol: KFX69490.1
gene_biotype: protein_coding
description:
  Rieske iron-sulfur protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113820
symbol: KFX69491.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: TMS3_0113830
symbol: KFX69492.1
gene_biotype: protein_coding
description:
  PEP synthetase regulatory protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: TMS3_0113835
symbol: prpD
gene_biotype: protein_coding
description:
  2-methylcitrate dehydratase; Functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113840
symbol: KFX69494.1
gene_biotype: protein_coding
description:
  3-methylitaconate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113845
symbol: KFX69495.1
gene_biotype: protein_coding
description:
  Aconitate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113850
symbol: KFX69496.1
gene_biotype: protein_coding
description:
  Catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113855
symbol: prpB
gene_biotype: protein_coding
description:
  2-methylisocitrate lyase; Catalyzes the thermodynamically favored C-C bond cleavage of (2R,3S)-2-methylisocitrate to yield pyruvate and succinate. Belongs to the isocitrate lyase/PEP mutase superfamily. Methylisocitrate lyase family.


ensembl_gene_id: TMS3_0113875
symbol: KFX69501.1
gene_biotype: protein_coding
description:
  alpha-L-glutamate ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113895
symbol: pabB
gene_biotype: protein_coding
description:
  Para-aminobenzoate synthase component 1; catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and L-glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113900
symbol: thrH
gene_biotype: protein_coding
description:
  Phosphoserine phosphatase; Catalyzes the formation of serine from phosphoserine; also has phosphoserine:homoserine phosphotransferase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113905
symbol: cysH
gene_biotype: protein_coding
description:
  Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.


ensembl_gene_id: TMS3_0113910
symbol: cysB
gene_biotype: protein_coding
description:
  LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113920
symbol: KFX69509.1
gene_biotype: protein_coding
description:
  5'-nucleotidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0113925
symbol: KFX69510.1
gene_biotype: protein_coding
description:
  2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.


ensembl_gene_id: TMS3_0113935
symbol: KFX69512.1
gene_biotype: protein_coding
description:
  Phospho-2-dehydro-3-deoxyheptonate aldolase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).


ensembl_gene_id: TMS3_0113985
symbol: uppP
gene_biotype: protein_coding
description:
  UDP pyrophosphate phosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: TMS3_0114000
symbol: KFX69524.1
gene_biotype: protein_coding
description:
  N-acetylglucosamine-6-sulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0114015
symbol: KFX69527.1
gene_biotype: protein_coding
description:
  Catalase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0114020
symbol: KFX69528.1
gene_biotype: protein_coding
description:
  6-carboxy-5,6,7,8-tetrahydropterin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0114025
symbol: queC
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: TMS3_0114030
symbol: queE
gene_biotype: protein_coding
description:
  7-carboxy-7-deazaguanine synthase; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: TMS3_0114035
symbol: cpoB
gene_biotype: protein_coding
description:
  Hypothetical protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.


ensembl_gene_id: TMS3_0114040
symbol: pal
gene_biotype: protein_coding
description:
  Peptidoglycan-binding protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: TMS3_0114045
symbol: tolB
gene_biotype: protein_coding
description:
  Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: TMS3_0114050
symbol: KFX68624.1
gene_biotype: protein_coding
description:
  Cell envelope biogenesis protein TolA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0114055
symbol: tolR
gene_biotype: protein_coding
description:
  Biopolymer transporter TolR; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: TMS3_0114060
symbol: tolQ
gene_biotype: protein_coding
description:
  Protein tolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: TMS3_0114070
symbol: ruvB
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: TMS3_0114075
symbol: ruvA
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: TMS3_0114080
symbol: ruvC
gene_biotype: protein_coding
description:
  Crossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: TMS3_0114090
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: TMS3_0114095
symbol: KFX68633.1
gene_biotype: protein_coding
description:
  Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0114105
symbol: KFX68635.1
gene_biotype: protein_coding
description:
  Ferritin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family.


ensembl_gene_id: TMS3_0114120
symbol: slyX
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the SlyX family.


ensembl_gene_id: TMS3_0114125
symbol: KFX68639.1
gene_biotype: protein_coding
description:
  Histidine triad (HIT) protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0114140
symbol: proS
gene_biotype: protein_coding
description:
  proline--tRNA ligase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves deacy [...]


ensembl_gene_id: TMS3_0114155
symbol: KFX68645.1
gene_biotype: protein_coding
description:
  Acylphosphatase; Catalyzes the hydrolysis of acylphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0114185
symbol: KFX68650.1
gene_biotype: protein_coding
description:
  Arsenate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0114190
symbol: KFX68651.1
gene_biotype: protein_coding
description:
  NAD(P)H-quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WrbA family.


ensembl_gene_id: TMS3_0114205
symbol: KFX68654.1
gene_biotype: protein_coding
description:
  Controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DnaA family. HdA subfamily.


ensembl_gene_id: TMS3_0114220
symbol: purM
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole synthetase; Catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0114225
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: TMS3_0114235
symbol: KFX68660.1
gene_biotype: protein_coding
description:
  Transcriptional antiterminator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0114240
symbol: KFX68661.1
gene_biotype: protein_coding
description:
  Nucleoprotein/polynucleotide-associated enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0114245
symbol: KFX68662.1
gene_biotype: protein_coding
description:
  Nucleoside triphosphate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0114255
symbol: rlmD
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.


ensembl_gene_id: TMS3_0114260
symbol: KFX68665.1
gene_biotype: protein_coding
description:
  Cysteine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the cysteine synthase/cystathionine beta- synthase family.


ensembl_gene_id: TMS3_0114280
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: TMS3_0114305
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: TMS3_0114310
symbol: KFX68673.1
gene_biotype: protein_coding
description:
  Thiol-disulfide oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0114370
symbol: gapA-2
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase; Required for glycolysis; catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: TMS3_0114400
symbol: KFX68687.1
gene_biotype: protein_coding
description:
  Subunit G of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved specifically with K+ transport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0114405
symbol: KFX68688.1
gene_biotype: protein_coding
description:
  Cation:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0114420
symbol: KFX68691.1
gene_biotype: protein_coding
description:
  NADH-ubiquinone oxidoreductase subunit 4L; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0114425
symbol: KFX68692.1
gene_biotype: protein_coding
description:
  Subunit A of antiporter complex involved in resistance to high concentrations of Na+, K+, Li+ and/or alkali; in S. meliloti it is known to be involved with K+; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0114435
symbol: pdxH
gene_biotype: protein_coding
description:
  Pyridoxine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).


ensembl_gene_id: TMS3_0114470
symbol: KFX68699.1
gene_biotype: protein_coding
description:
  Collagen pro alpha-chain precursor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0114495
symbol: KFX68703.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0225 family.


ensembl_gene_id: TMS3_0114510
symbol: KFX68706.1
gene_biotype: protein_coding
description:
  Zinc chelation protein SecC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0114520
symbol: KFX68708.1
gene_biotype: protein_coding
description:
  Acyl-homoserine lactone acylase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: TMS3_0114540
symbol: KFX68712.1
gene_biotype: protein_coding
description:
  ATP-binding protein; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: TMS3_0114545
symbol: metG
gene_biotype: protein_coding
description:
  methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: TMS3_0114550
symbol: rnfA
gene_biotype: protein_coding
description:
  Electron transporter RsxA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: TMS3_0114555
symbol: rnfB
gene_biotype: protein_coding
description:
  Electron transporter RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.


ensembl_gene_id: TMS3_0114560
symbol: rnfC
gene_biotype: protein_coding
description:
  Electron transporter RnfC; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfC subfamily.


ensembl_gene_id: TMS3_0114565
symbol: rnfD
gene_biotype: protein_coding
description:
  Electron transporter RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: TMS3_0114570
symbol: rnfG
gene_biotype: protein_coding
description:
  Electron transporter RnfG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.


ensembl_gene_id: TMS3_0114575
symbol: rnfE
gene_biotype: protein_coding
description:
  Electron transporter RnfE; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: TMS3_0114580
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


