# geneInfo

ensembl_gene_id: Z042_12675
symbol: AHG22782.1
gene_biotype: protein_coding
description:
  Alpha-ribazole phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_12680
symbol: AHG20388.1
gene_biotype: protein_coding
description:
  Hydroxyacid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_12700
symbol: dppD
gene_biotype: protein_coding
description:
  DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_12705
symbol: dppF
gene_biotype: protein_coding
description:
  Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_12720
symbol: AHG20396.1
gene_biotype: protein_coding
description:
  Cellulose biosynthesis protein BcsE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_12730
symbol: AHG20398.1
gene_biotype: protein_coding
description:
  Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_12735
symbol: bcsA
gene_biotype: protein_coding
description:
  Cellulose synthase; Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose.


ensembl_gene_id: Z042_12740
symbol: AHG20400.1
gene_biotype: protein_coding
description:
  Cellulose synthase; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.


ensembl_gene_id: Z042_12750
symbol: AHG20401.1
gene_biotype: protein_coding
description:
  Cellulose is produced by the multicellular morphotypes of E. coli and Salmonella typhimurium; the cellulose biosynthesis genes bcsA, bcsB, bcsZ and bcsC are constitutively transcribed, however, cellulose synthesis is dependent on the expression of adrA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_12755
symbol: AHG20402.2
gene_biotype: protein_coding
description:
  Biofilm formation regulator HmsP; HmsP in Yersinia pestis plays a role in invasion of epithelial cells; the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation; inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_12760
symbol: dctA
gene_biotype: protein_coding
description:
  C4-dicarboxylate transporter; Responsible for the transport of dicarboxylates such as succinate, fumarate, and malate across the membrane. Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: Z042_12770
symbol: AHG20405.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; Rotamase C; accelerates isomerization of the peptidyl prolyl bond; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_12775
symbol: rep
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase Rep; Rep helicase is a single-stranded DNA-dependent ATPase involved in DNA replication; it can initiate unwinding at a nick in the DNA. It binds to the single-stranded DNA and acts in a progressive fashion along the DNA in the 3' to 5' direction.


ensembl_gene_id: Z042_12780
symbol: gppA
gene_biotype: protein_coding
description:
  Guanosine polyphosphate pyrophosphohydrolase; Catalyzes the conversion of pppGpp to ppGpp. Guanosine pentaphosphate (pppGpp) is a cytoplasmic signaling molecule which together with ppGpp controls the 'stringent response', an adaptive process that allows bacteria to respond to amino acid starvation, resulting in the coordinated regulation of numerous cellular activities.


ensembl_gene_id: Z042_12785
symbol: rhlB
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase RhlB; DEAD-box RNA helicase involved in RNA degradation. Has RNA- dependent ATPase activity and unwinds double-stranded RNA. Belongs to the DEAD box helicase family. RhlB subfamily.


ensembl_gene_id: Z042_12790
symbol: trxA
gene_biotype: protein_coding
description:
  Thioredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thioredoxin family.


ensembl_gene_id: Z042_12795
symbol: rho
gene_biotype: protein_coding
description:
  Transcription termination factor Rho; Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA- dependent ATPase activity, and release of the mRNA from the DNA template.


ensembl_gene_id: Z042_12800
symbol: wecA
gene_biotype: protein_coding
description:
  UDP-phosphate N-acetylglucosaminyl 1-phosphate transferase; Catalyzes the transfer of the GlcNAc-1-phosphate moiety from UDP-GlcNAc onto the carrier lipid undecaprenyl phosphate (C55-P), yielding GlcNAc-pyrophosphoryl-undecaprenyl (GlcNAc-PP-C55).


ensembl_gene_id: Z042_12805
symbol: wzzE
gene_biotype: protein_coding
description:
  Lipopolysaccharide biosynthesis protein WzzE; Modulates the polysaccharide chain length of enterobacterial common antigen (ECA); Belongs to the WzzB/Cld/Rol family.


ensembl_gene_id: Z042_12810
symbol: wecB
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase; Catalyzes the reversible epimerization at C-2 of UDP-N- acetylglucosamine (UDP-GlcNAc) and thereby provides bacteria with UDP- N-acetylmannosamine (UDP-ManNAc), the activated donor of ManNAc residues.


ensembl_gene_id: Z042_12815
symbol: wecC
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-mannosamine dehydrogenase; Catalyzes the four-electron oxidation of UDP-N-acetyl-D- mannosamine (UDP-ManNAc), reducing NAD(+) and releasing UDP-N- acetylmannosaminuronic acid (UDP-ManNAcA); Belongs to the UDP-glucose/GDP-mannose dehydrogenase family. WecC subfamily.


ensembl_gene_id: Z042_12820
symbol: AHG20415.1
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: Z042_12825
symbol: AHG20416.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: Z042_12830
symbol: wecD
gene_biotype: protein_coding
description:
  TDP-fucosamine acetyltransferase; Catalyzes the acetylation of dTDP-fucosamine (dTDP-4-amino- 4,6-dideoxy-D-galactose) to dTDP-Fuc4NAc, which is utilized in the biosynthesis of the enterobacterial common antigen (ECA). Belongs to the WecD family.


ensembl_gene_id: Z042_12835
symbol: wecE
gene_biotype: protein_coding
description:
  TDP-4-oxo-6-deoxy-D-glucose aminotransferase; Catalyzes the synthesis of dTDP-4-amino-4,6-dideoxy-D- galactose (dTDP-Fuc4N) from dTDP-4-keto-6-deoxy-D-glucose (dTDP-D- Glc4O) and L-glutamate; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: Z042_12840
symbol: wzxE
gene_biotype: protein_coding
description:
  O-antigen translocase; Mediates the transbilayer movement of Und-PP-GlcNAc-ManNAcA- Fuc4NAc (lipid III) from the inner to the outer leaflet of the cytoplasmic membrane during the assembly of enterobacterial common antigen (ECA); Belongs to the polysaccharide transport (PST) (TC 2.A.66.2) family.


ensembl_gene_id: Z042_12845
symbol: wecF
gene_biotype: protein_coding
description:
  4-alpha-L-fucosyltransferase; Catalyzes the synthesis of Und-PP-GlcNAc-ManNAcA-Fuc4NAc (Lipid III), the third lipid-linked intermediate involved in ECA synthesis; Belongs to the glycosyltransferase 56 family.


ensembl_gene_id: Z042_12850
symbol: wzyE
gene_biotype: protein_coding
description:
  Common antigen polymerase; Probably involved in the polymerization of enterobacterial common antigen (ECA) trisaccharide repeat units; Belongs to the WzyE family.


ensembl_gene_id: Z042_12855
symbol: wecG
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-mannosaminuronic acid transferase; Catalyzes the synthesis of Und-PP-GlcNAc-ManNAcA (Lipid II), the second lipid-linked intermediate involved in enterobacterial common antigen (ECA) synthesis.


ensembl_gene_id: Z042_12880
symbol: AHG20423.1
gene_biotype: protein_coding
description:
  Protoheme IX biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_12885
symbol: AHG20424.1
gene_biotype: protein_coding
description:
  uroporphyrin-III methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_12890
symbol: hemD
gene_biotype: protein_coding
description:
  uroporphyrinogen-III synthase; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III.


ensembl_gene_id: Z042_12895
symbol: hemC
gene_biotype: protein_coding
description:
  Porphobilinogen deaminase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: Z042_12900
symbol: cyaA
gene_biotype: protein_coding
description:
  Adenylate cyclase; Catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the adenylyl cyclase class-1 family.


ensembl_gene_id: Z042_12915
symbol: cyaY
gene_biotype: protein_coding
description:
  Frataxin-like protein; Involved in iron-sulfur (Fe-S) cluster assembly. May act as a regulator of Fe-S biogenesis.


ensembl_gene_id: Z042_12925
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: Z042_12935
symbol: xerC
gene_biotype: protein_coding
description:
  Site-specific tyrosine recombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. Binds cooperatively to specific DNA consensus sequences that are separated from XerD binding sites by a short central region, forming the heterotetrameric XerC-XerD complex that recombines DNA substrates. The complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. In the complex XerC specifical [...]


ensembl_gene_id: Z042_12940
symbol: AHG20435.1
gene_biotype: protein_coding
description:
  Flavin mononucleotide phosphatase; YigB; member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_12945
symbol: uvrD
gene_biotype: protein_coding
description:
  DNA-dependent helicase II; Unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_12950
symbol: AHG20437.1
gene_biotype: protein_coding
description:
  Protein WbuC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_12975
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium transporter CorA; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: Z042_12990
symbol: AHG20441.1
gene_biotype: protein_coding
description:
  Chloramphenical resistance permease RarD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13000
symbol: AHG20443.1
gene_biotype: protein_coding
description:
  Phospholipase A; Hydrolysis of phosphatidylcholine with phospholipase A2 (EC 3.1.1.4) and phospholipase A1 (EC 3.1.1.32) activities. Belongs to the phospholipase A1 family.


ensembl_gene_id: Z042_13005
symbol: AHG20444.1
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecQ; Functions in blocking illegitimate recombination, enhancing topoisomerase activity, initiating SOS signaling and clearing blocked replication forks; component of the RecF recombinational pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13010
symbol: AHG20445.1
gene_biotype: protein_coding
description:
  Threonine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13015
symbol: rhtB
gene_biotype: protein_coding
description:
  Homoserine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13035
symbol: AHG20448.1
gene_biotype: protein_coding
description:
  Cysteine hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13060
symbol: AHG20453.1
gene_biotype: protein_coding
description:
  glutamyl-tRNA amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13065
symbol: AHG20454.1
gene_biotype: protein_coding
description:
  Permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13090
symbol: AHG20458.2
gene_biotype: protein_coding
description:
  Luciferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13095
symbol: AHG22788.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the arylamine N-acetyltransferase family.


ensembl_gene_id: Z042_13100
symbol: glpQ
gene_biotype: protein_coding
description:
  Glycerophosphodiester phosphodiesterase; Hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols; periplasmic; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13105
symbol: glpT
gene_biotype: protein_coding
description:
  Sn-glycerol-3-phosphate transporter; Catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13110
symbol: AHG20461.1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: Z042_13115
symbol: glpB
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor.


ensembl_gene_id: Z042_13120
symbol: glpC
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate dehydrogenase; Anaerobic; with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13130
symbol: AHG20465.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the import of queuosine (Q) precursors, required for Q precursor salvage; Belongs to the vitamin uptake transporter (VUT/ECF) (TC 2.A.88) family. Q precursor transporter subfamily.


ensembl_gene_id: Z042_13135
symbol: tusA
gene_biotype: protein_coding
description:
  Sulfur transfer protein SirA; Sulfur carrier protein involved in sulfur trafficking in the cell. Part of a sulfur-relay system required for 2-thiolation during synthesis of 2-thiouridine of the modified wobble base 5- methylaminomethyl-2-thiouridine (mnm(5)s(2)U) in tRNA. Interacts with IscS and stimulates its cysteine desulfurase activity. Accepts an activated sulfur from IscS, which is then transferred to TusD, and thus determines the direction of sulfur flow from IscS to 2-thiouridine formation. Also appears to be involved in sulfur transfer for the biosynthesis of molybdopterin.


ensembl_gene_id: Z042_13140
symbol: zntA
gene_biotype: protein_coding
description:
  Zinc ABC transporter ATPase; P-type ATPase involved in the export of lead, cadmium, zinc and mercury; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13155
symbol: rsmD
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Specifically methylates the guanine in position 966 of 16S rRNA in the assembled 30S particle; Belongs to the methyltransferase superfamily. RsmD family.


ensembl_gene_id: Z042_13160
symbol: ftsY
gene_biotype: protein_coding
description:
  Cell division protein FtsY; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC). Interaction with SRP-RNC leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components.


ensembl_gene_id: Z042_13170
symbol: ftsX
gene_biotype: protein_coding
description:
  Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: Z042_13175
symbol: rpoH
gene_biotype: protein_coding
description:
  RNA polymerase factor sigma-32; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is involved in regulation of expression of heat shock genes.


ensembl_gene_id: Z042_13185
symbol: AHG20476.1
gene_biotype: protein_coding
description:
  Hydroxyisourate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.


ensembl_gene_id: Z042_13200
symbol: panZ
gene_biotype: protein_coding
description:
  Acetyltransferase; Controls both the activation and catalytic activity of PanD in a coenzyme A (CoA)-dependent fashion; Belongs to the PanZ/PanM family.


ensembl_gene_id: Z042_13205
symbol: AHG20480.1
gene_biotype: protein_coding
description:
  Leucine ABC transporter substrate-binding protein; With LivFGHM is involved in the high affinity leucine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13210
symbol: AHG20481.1
gene_biotype: protein_coding
description:
  LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Z042_13215
symbol: livM
gene_biotype: protein_coding
description:
  Leucine/isoleucine/valine transporter permease subunit; Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Z042_13220
symbol: livG
gene_biotype: protein_coding
description:
  Leucine/isoleucine/valine transporter ATP-binding subunit; Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13225
symbol: livF
gene_biotype: protein_coding
description:
  Leucine/isoleucine/valine transporter ATP-binding subunit; With LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13235
symbol: ugpQ
gene_biotype: protein_coding
description:
  Glycerophosphodiester phosphodiesterase; Hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol; induced when cells are starved for inorganic phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13250
symbol: AHG20489.1
gene_biotype: protein_coding
description:
  Homocysteine-binding; positive regulator of metA, metE and metH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: Z042_13255
symbol: metE
gene_biotype: protein_coding
description:
  5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation; Belongs to the vitamin-B12 independent methionine synthase family.


ensembl_gene_id: Z042_13270
symbol: AHG20492.1
gene_biotype: protein_coding
description:
  Carboxymethylenebutenolidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13295
symbol: AHG20493.1
gene_biotype: protein_coding
description:
  Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the PNP/UDP phosphorylase family.


ensembl_gene_id: Z042_13310
symbol: AHG20496.2
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13320
symbol: AHG20498.1
gene_biotype: protein_coding
description:
  DNA recombination protein RmuC; YigN; nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence; transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13325
symbol: ubiE
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).


ensembl_gene_id: Z042_13335
symbol: ubiB
gene_biotype: protein_coding
description:
  Ubiquinone biosynthesis protein UbiB; Is probably a protein kinase regulator of UbiI activity which is involved in aerobic coenzyme Q (ubiquinone) biosynthesis.


ensembl_gene_id: Z042_13340
symbol: tatA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: Z042_13345
symbol: tatB
gene_biotype: protein_coding
description:
  Translocase; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation.


ensembl_gene_id: Z042_13350
symbol: tatC
gene_biotype: protein_coding
description:
  Twin-arginine protein translocation system subunit TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.


ensembl_gene_id: Z042_13355
symbol: tatD
gene_biotype: protein_coding
description:
  DNase TatD; 3'-5' exonuclease that prefers single-stranded DNA and RNA. May play a role in the H(2)O(2)-induced DNA damage repair. Belongs to the metallo-dependent hydrolases superfamily. TatD-type hydrolase family. TatD subfamily.


ensembl_gene_id: Z042_13360
symbol: AHG20506.1
gene_biotype: protein_coding
description:
  Delta-aminolevulinic acid dehydratase; Catalyzes the formation of porphobilinogen from 5-aminolevulinate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ALAD family.


ensembl_gene_id: Z042_13365
symbol: rfaH
gene_biotype: protein_coding
description:
  Transcriptional regulator; Enhances distal genes transcription elongation in a specialized subset of operons that encode extracytoplasmic components. RfaH is recruited into a multi-component RNA polymerase complex by the ops element, which is a short conserved DNA sequence located downstream of the main promoter of these operons. Once bound, RfaH suppresses pausing and inhibits Rho-dependent and intrinsic termination at a subset of sites. Termination signals are bypassed, which allows complete synthesis of long RNA chains.


ensembl_gene_id: Z042_13370
symbol: AHG20508.1
gene_biotype: protein_coding
description:
  Alpha-aspartyl dipeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S51 family.


ensembl_gene_id: Z042_13375
symbol: ubiD
gene_biotype: protein_coding
description:
  3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol, an intermediate step in ubiquinone biosynthesis.


ensembl_gene_id: Z042_13380
symbol: fre
gene_biotype: protein_coding
description:
  NAD(P)H-flavin reductase; catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide; in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13395
symbol: fadB
gene_biotype: protein_coding
description:
  Multifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: Z042_13410
symbol: AHG20515.1
gene_biotype: protein_coding
description:
  Potassium transporter; Low-affinity potassium transport system. Interacts with Trk system potassium uptake protein TrkA; Belongs to the TrkH potassium transport family.


ensembl_gene_id: Z042_13415
symbol: AHG20516.1
gene_biotype: protein_coding
description:
  Protoporphyrinogen oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13445
symbol: birA
gene_biotype: protein_coding
description:
  biotin--[acetyl-CoA-carboxylase] synthetase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a biotin-operon repressor. In the presence of ATP, BirA activates biotin to form the BirA-biotinyl-5'-adenylate (BirA-bio-5'-AMP or holoBirA) complex. HoloBirA can either transfer the biotinyl moiety to the biotin carboxyl carrier protein (BCCP) subunit of acetyl-CoA carboxylase, or bind to the biotin operator site and inhibit transcription of the operon.


ensembl_gene_id: Z042_13450
symbol: coaA
gene_biotype: protein_coding
description:
  Pantothenate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13480
symbol: secE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation; Belongs to the SecE/SEC61-gamma family.


ensembl_gene_id: Z042_13485
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antiterminator NusG; Participates in transcription elongation, termination and antitermination. In the absence of Rho, increases the rate of transcription elongation by the RNA polymerase (RNAP), probably by partially suppressing pausing. In the presence of Rho, modulates most Rho-dependent termination events by interacting with the RNAP to render the complex more susceptible to the termination activity of Rho. May be required to overcome a kinetic limitation of Rho to function at certain terminators. Also involved in ribosomal RNA transcriptional antitermination; Belongs [...]


ensembl_gene_id: Z042_13490
symbol: rplK
gene_biotype: protein_coding
description:
  50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: Z042_13495
symbol: rplA
gene_biotype: protein_coding
description:
  50S ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: Z042_13500
symbol: rplJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: Z042_13505
symbol: rplL
gene_biotype: protein_coding
description:
  50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: Z042_13510
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: Z042_13520
symbol: AHG20529.1
gene_biotype: protein_coding
description:
  Shikimate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13525
symbol: thiH
gene_biotype: protein_coding
description:
  In Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13530
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: Z042_13535
symbol: AHG20532.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13540
symbol: AHG20533.1
gene_biotype: protein_coding
description:
  Molybdopterin-synthase adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13545
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate pyrophosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: Z042_13550
symbol: thiC
gene_biotype: protein_coding
description:
  Thiamine biosynthesis protein ThiC; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction.


ensembl_gene_id: Z042_13555
symbol: rsd
gene_biotype: protein_coding
description:
  Regulator of sigma D; Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase.


ensembl_gene_id: Z042_13560
symbol: nudC
gene_biotype: protein_coding
description:
  NADH pyrophosphatase; Can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH; requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family. NudC subfamily.


ensembl_gene_id: Z042_13565
symbol: hemE
gene_biotype: protein_coding
description:
  Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III.


ensembl_gene_id: Z042_13570
symbol: nfi
gene_biotype: protein_coding
description:
  Endonuclease V; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA.


ensembl_gene_id: Z042_13580
symbol: AHG20541.1
gene_biotype: protein_coding
description:
  DNA-binding protein; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: Z042_13630
symbol: AHG20547.1
gene_biotype: protein_coding
description:
  Transketolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13645
symbol: AHG20550.1
gene_biotype: protein_coding
description:
  Carbohydrate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FGGY kinase family.


ensembl_gene_id: Z042_13685
symbol: cmtB
gene_biotype: protein_coding
description:
  PTS system mannitol-specific transporter subunit IIA; TolM; with CmtA (IIBC), CmtB possibly forms the mannitol-like permease component of the cryptic mannitol phosphotransferase system, which phosphorylates and transports various carbohydrates and polyhydric alcohols in Escherichia coli; cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13695
symbol: AHG20559.1
gene_biotype: protein_coding
description:
  PTS beta-glucoside transporter subunit IIBC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13720
symbol: AHG20564.1
gene_biotype: protein_coding
description:
  PTS fructose transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13725
symbol: AHG20565.2
gene_biotype: protein_coding
description:
  PTS fructose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13760
symbol: AHG20571.1
gene_biotype: protein_coding
description:
  Fusaric acid resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13765
symbol: AHG20572.1
gene_biotype: protein_coding
description:
  Transporter; CyaE is necessary for transport of calmodulin-sensitive adenylate cyclase-hemolysin (cyclolysin). Belongs to the outer membrane factor (OMF) (TC 1.B.17) family.


ensembl_gene_id: Z042_13770
symbol: AHG20573.1
gene_biotype: protein_coding
description:
  Glutamate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the group II decarboxylase family.


ensembl_gene_id: Z042_13775
symbol: AHG20574.1
gene_biotype: protein_coding
description:
  Antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13785
symbol: AHG20576.1
gene_biotype: protein_coding
description:
  Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IUNH family.


ensembl_gene_id: Z042_13800
symbol: AHG20579.1
gene_biotype: protein_coding
description:
  2-oxoglutarate translocator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13820
symbol: AHG20582.1
gene_biotype: protein_coding
description:
  Allantoin permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_13975
symbol: AHG20603.1
gene_biotype: protein_coding
description:
  Klebicin C phage associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_14035
symbol: AHG20612.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Sigma 54-dependent; regulates genes involved in forming a 2',3'-cyclic phosphodiester on RNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_14040
symbol: AHG20613.1
gene_biotype: protein_coding
description:
  SPFH domain / Band 7 family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_14045
symbol: AHG20614.1
gene_biotype: protein_coding
description:
  RNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_14050
symbol: AHG20615.1
gene_biotype: protein_coding
description:
  Nucleotidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_14090
symbol: AHG20623.1
gene_biotype: protein_coding
description:
  Helix-turn-helix domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_14135
symbol: AHG20632.2
gene_biotype: protein_coding
description:
  Conjugal transfer protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_14170
symbol: AHG20637.1
gene_biotype: protein_coding
description:
  Stability determinant; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_14205
symbol: AHG20644.1
gene_biotype: protein_coding
description:
  Bacterial conjugation TrbI-like family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_14275
symbol: AHG20656.1
gene_biotype: protein_coding
description:
  DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.


ensembl_gene_id: Z042_14310
symbol: AHG20658.1
gene_biotype: protein_coding
description:
  DNA repair protein RadC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0758 family.


ensembl_gene_id: Z042_14335
symbol: AHG20661.1
gene_biotype: protein_coding
description:
  DNA primase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_14350
symbol: AHG20663.1
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_14395
symbol: dipZ
gene_biotype: protein_coding
description:
  Thiol:disulfide interchange protein precursor; Required to facilitate the formation of correct disulfide bonds in some periplasmic proteins and for the assembly of the periplasmic c-type cytochromes. Acts by transferring electrons from cytoplasmic thioredoxin to the periplasm. This transfer involves a cascade of disulfide bond formation and reduction steps. Belongs to the thioredoxin family. DsbD subfamily.


ensembl_gene_id: Z042_14400
symbol: cutA
gene_biotype: protein_coding
description:
  Cation tolerance protein CutA; Involved in resistance toward heavy metals. Belongs to the CutA family.


ensembl_gene_id: Z042_14405
symbol: AHG20673.1
gene_biotype: protein_coding
description:
  C4-dicarboxylate transporter; Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane; Belongs to the DcuA/DcuB transporter (TC 2.A.13.1) family.


ensembl_gene_id: Z042_14410
symbol: aspA
gene_biotype: protein_coding
description:
  Aspartate ammonia-lyase; Catalyzes the formation of fumarate from aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_14415
symbol: fxsA
gene_biotype: protein_coding
description:
  F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_14425
symbol: groES
gene_biotype: protein_coding
description:
  Molecular chaperone GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: Z042_14430
symbol: groEL
gene_biotype: protein_coding
description:
  Molecular chaperone GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: Z042_14445
symbol: AHG20680.1
gene_biotype: protein_coding
description:
  Lysine 2,3-aminomutase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_14450
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Alleviates ribosome stalling that occurs when 3 or more consecutive Pro residues or the sequence PPG is present in a protein, possibly by augmenting the peptidyl transferase activity of the ribosome. Modification of Lys-34 is required for alleviation; Belongs to the elongation factor P family.


ensembl_gene_id: Z042_14470
symbol: AHG20683.1
gene_biotype: protein_coding
description:
  Multidrug transporter; Member of the SMR family of proton-dependent drug efflux transporters; quaternary ammonium compound efflux pump; confers resistance to cetylpyridinium, cetyldimethylethyl ammonium and cetrimide cations; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_14475
symbol: frdD
gene_biotype: protein_coding
description:
  Fumarate reductase; Seems to be involved in the anchoring of the catalytic components of the fumarate reductase complex to the cytoplasmic membrane.


ensembl_gene_id: Z042_14485
symbol: AHG20686.1
gene_biotype: protein_coding
description:
  Part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_14495
symbol: epmA
gene_biotype: protein_coding
description:
  poxB regulator PoxA; With EpmB is involved in the beta-lysylation step of the post-translational modification of translation elongation factor P (EF- P). Catalyzes the ATP-dependent activation of (R)-beta-lysine produced by EpmB, forming a lysyl-adenylate, from which the beta-lysyl moiety is then transferred to the epsilon-amino group of a conserved specific lysine residue in EF-P; Belongs to the class-II aminoacyl-tRNA synthetase family. EpmA subfamily.


ensembl_gene_id: Z042_14500
symbol: AHG20689.1
gene_biotype: protein_coding
description:
  Mechanosensitive channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_14505
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: Z042_14510
symbol: rsgA
gene_biotype: protein_coding
description:
  GTPase RsgA; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: Z042_14515
symbol: orn
gene_biotype: protein_coding
description:
  Oligoribonuclease; 3'-to-5' exoribonuclease specific for small oligoribonucleotides; Belongs to the oligoribonuclease family.


ensembl_gene_id: Z042_14590
symbol: AHG20701.1
gene_biotype: protein_coding
description:
  Carboxymuconolactone decarboxylase; Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity. Belongs to the AhpD family.


ensembl_gene_id: Z042_14625
symbol: AHG20707.1
gene_biotype: protein_coding
description:
  Zinc-binding dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_14640
symbol: AHG20709.1
gene_biotype: protein_coding
description:
  NADPH:quinone reductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily.


ensembl_gene_id: Z042_14675
symbol: AHG20715.1
gene_biotype: protein_coding
description:
  Arsenical pump membrane protein; Involved in arsenical resistance. Thought to form the channel of an arsenite pump; Belongs to the ArsB family.


ensembl_gene_id: Z042_14690
symbol: AHG20718.1
gene_biotype: protein_coding
description:
  Arsenic resistance operon repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_14695
symbol: AHG20719.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sigma-70 factor family. ECF subfamily.


ensembl_gene_id: Z042_14700
symbol: AHG20720.1
gene_biotype: protein_coding
description:
  NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_14775
symbol: AHG20730.2
gene_biotype: protein_coding
description:
  Modification methylase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.


ensembl_gene_id: Z042_14790
symbol: AHG20733.1
gene_biotype: protein_coding
description:
  Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_14875
symbol: azoR
gene_biotype: protein_coding
description:
  NAD(P)H dehydrogenase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.


ensembl_gene_id: Z042_14880
symbol: AHG20743.1
gene_biotype: protein_coding
description:
  Tautomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_14895
symbol: queG
gene_biotype: protein_coding
description:
  [Fe-S]-binding protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr); Belongs to the QueG family.


ensembl_gene_id: Z042_14900
symbol: nnrE
gene_biotype: protein_coding
description:
  Carbohydrate kinase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epim [...]


ensembl_gene_id: Z042_14905
symbol: AHG20748.1
gene_biotype: protein_coding
description:
  ADP-binding protein; Needed for nucleoid integrity; possibly involved in cell wall synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_14915
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: Z042_14920
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: Z042_14925
symbol: hfq
gene_biotype: protein_coding
description:
  RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: Z042_14930
symbol: hflX
gene_biotype: protein_coding
description:
  GTPase HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.


ensembl_gene_id: Z042_14950
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: Z042_14955
symbol: nsrR
gene_biotype: protein_coding
description:
  Transcriptional repressor NsrR; Nitric oxide-sensitive repressor of genes involved in protecting the cell against nitrosative stress. May require iron for activity.


ensembl_gene_id: Z042_14960
symbol: rnr
gene_biotype: protein_coding
description:
  Exoribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs. Belongs to the RNR ribonuclease family. RNase R subfamily.


ensembl_gene_id: Z042_14965
symbol: rlmB
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Specifically methylates the ribose of guanosine 2251 in 23S rRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. RlmB subfamily.


ensembl_gene_id: Z042_14970
symbol: AHG20761.1
gene_biotype: protein_coding
description:
  isovaleryl-CoA dehydrogenase; Catalyzes the formation of 3-methylcrotonyl-CoA from isovaleryl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_14975
symbol: AHG20762.1
gene_biotype: protein_coding
description:
  YjfP; esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro; unknown function and substrate in vivo; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_14995
symbol: priB
gene_biotype: protein_coding
description:
  Primosomal replication protein N; Binds single-stranded DNA at the primosome assembly site (PAS); Belongs to the PriB family.


ensembl_gene_id: Z042_15000
symbol: rpsR
gene_biotype: protein_coding
description:
  30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: Z042_15020
symbol: AHG20770.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; FKBP-type; rotamase; catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15030
symbol: cpdB
gene_biotype: protein_coding
description:
  Periplasmic enzyme; functions during ribonucleic acid degradation; 2',3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5'-nucleotidase family.


ensembl_gene_id: Z042_15035
symbol: cysQ
gene_biotype: protein_coding
description:
  Adenosine-3'(2'),5'-bisphosphate nucleotidase; Converts adenosine-3',5'-bisphosphate (PAP) to AMP. Belongs to the inositol monophosphatase superfamily. CysQ family.


ensembl_gene_id: Z042_15055
symbol: msrA
gene_biotype: protein_coding
description:
  Methionine sulfoxide reductase A; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: Z042_15065
symbol: AHG20779.1
gene_biotype: protein_coding
description:
  Translocation and assembly module TamB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15070
symbol: AHG20780.2
gene_biotype: protein_coding
description:
  Gamma-glutamylcyclotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15075
symbol: ppa
gene_biotype: protein_coding
description:
  Inorganic pyrophosphatase; Catalyzes the hydrolysis of inorganic pyrophosphate (PPi) forming two phosphate ions.


ensembl_gene_id: Z042_15085
symbol: fbp
gene_biotype: protein_coding
description:
  Catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FBPase class 1 family.


ensembl_gene_id: Z042_15090
symbol: mpl
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase; Reutilizes the intact tripeptide L-alanyl-gamma-D-glutamyl- meso-diaminopimelate by linking it to UDP-N-acetylmuramate. Belongs to the MurCDEF family. Mpl subfamily.


ensembl_gene_id: Z042_15110
symbol: AHG20788.2
gene_biotype: protein_coding
description:
  Serine protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15125
symbol: AHG20790.1
gene_biotype: protein_coding
description:
  Octaprenyl diphosphate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: Z042_15130
symbol: rplU
gene_biotype: protein_coding
description:
  50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: Z042_15135
symbol: rpmA
gene_biotype: protein_coding
description:
  50S ribosomal protein L27; Involved in the peptidyltransferase reaction during translation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL27 family.


ensembl_gene_id: Z042_15145
symbol: obgE
gene_biotype: protein_coding
description:
  GTPase CgtA; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: Z042_15150
symbol: AHG20795.1
gene_biotype: protein_coding
description:
  Sensor protein BasS/PmrB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15160
symbol: AHG20797.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase; Penicillin binding protein 4; penicillin sensitive; catalyzes the formation of D-alanine from D-alanyl-D-alanine; one of four, DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15165
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: Z042_15170
symbol: AHG20799.1
gene_biotype: protein_coding
description:
  RNA-binding protein YhbY; RNA binding protein found associated to pre-50S subunit of the ribosome; putative role in ribosome assembly; necessary for optimal growth but not cell viability; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15175
symbol: rrmJ
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Specifically methylates the uridine in position 2552 of 23S rRNA at the 2'-O position of the ribose in the fully assembled 50S ribosomal subunit.


ensembl_gene_id: Z042_15180
symbol: hflB
gene_biotype: protein_coding
description:
  ATP-dependent metalloprotease; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: Z042_15185
symbol: folP
gene_biotype: protein_coding
description:
  Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.


ensembl_gene_id: Z042_15190
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: Z042_15200
symbol: secG
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: Z042_15215
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation protein RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: Z042_15220
symbol: nusA
gene_biotype: protein_coding
description:
  Transcription elongation factor NusA; Participates in both transcription termination and antitermination.


ensembl_gene_id: Z042_15225
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: Z042_15230
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: Z042_15235
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: Z042_15240
symbol: rpsO
gene_biotype: protein_coding
description:
  30S ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: Z042_15245
symbol: pnp
gene_biotype: protein_coding
description:
  Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: Z042_15255
symbol: deaD
gene_biotype: protein_coding
description:
  DEAD/DEAH box helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.


ensembl_gene_id: Z042_15265
symbol: AHG20815.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sulfur carrier protein TusA family.


ensembl_gene_id: Z042_15335
symbol: AHG20826.1
gene_biotype: protein_coding
description:
  SCP-2 sterol transfer family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15375
symbol: AHG20831.1
gene_biotype: protein_coding
description:
  Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15390
symbol: AHG20834.1
gene_biotype: protein_coding
description:
  6-O-methylguanine DNA methyltransferase; Regulates genes involved in the repair of alkylated DNA; repairs DNA containing 6-O-methylguanine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15395
symbol: AHG20835.1
gene_biotype: protein_coding
description:
  Proline hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15405
symbol: AHG20836.1
gene_biotype: protein_coding
description:
  Nuclease PIN; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15410
symbol: AHG20837.1
gene_biotype: protein_coding
description:
  Molecular chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family.


ensembl_gene_id: Z042_15420
symbol: AHG20839.1
gene_biotype: protein_coding
description:
  Type VI secretion system protein ImpG; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15430
symbol: AHG20841.1
gene_biotype: protein_coding
description:
  Protein of avirulence locus ImpE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15435
symbol: AHG20842.1
gene_biotype: protein_coding
description:
  Type VI secretion system-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15470
symbol: AHG20847.1
gene_biotype: protein_coding
description:
  EvpB family type VI secretion protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15485
symbol: AHG20850.1
gene_biotype: protein_coding
description:
  Protein phosphatase ImpM; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15490
symbol: AHG20851.1
gene_biotype: protein_coding
description:
  Type VI secretion system protein ImpL; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15505
symbol: AHG20854.1
gene_biotype: protein_coding
description:
  Type VI secretion lipoprotein/VasD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15530
symbol: AHG20859.1
gene_biotype: protein_coding
description:
  Pentapeptide repeat; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15605
symbol: AHG20868.2
gene_biotype: protein_coding
description:
  Fimbrial chaperone protein FimC; Involved in type 1 fimbriae biosynthesis, interacts with FimH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15615
symbol: fimH
gene_biotype: protein_coding
description:
  Adhesin; Involved in the regulation of fimbriae length and mediates adhesion of type 1 fimbriae; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15660
symbol: cas1
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas1; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: Z042_15665
symbol: AHG20877.1
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas3; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15670
symbol: AHG20878.1
gene_biotype: protein_coding
description:
  CRISPR-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15680
symbol: AHG20880.1
gene_biotype: protein_coding
description:
  CRISPR-associated protein Cas5; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15685
symbol: AHG20881.1
gene_biotype: protein_coding
description:
  CRISPR-associated protein Csy4; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15690
symbol: AHG20882.1
gene_biotype: protein_coding
description:
  Peptidase M66; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15725
symbol: AHG20889.1
gene_biotype: protein_coding
description:
  acetyl-CoA acetyltransferase; Catalyzes the synthesis of acetoacetyl coenzyme A from two molecules of acetyl coenzyme A. It can also act as a thiolase, catalyzing the reverse reaction and generating two-carbon units from the four-carbon product of fatty acid oxidation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the thiolase-like superfamily. Thiolase family.


ensembl_gene_id: Z042_15745
symbol: AHG20891.1
gene_biotype: protein_coding
description:
  Aldo/keto reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15755
symbol: AHG22860.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Z042_15765
symbol: AHG20893.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0306 family.


ensembl_gene_id: Z042_15780
symbol: phnP
gene_biotype: protein_coding
description:
  Carbon-phosphorus lyase complex accessory protein; Required for the use of phosphonates and phosphite as phosphorus sources; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15785
symbol: phnN
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP).


ensembl_gene_id: Z042_15790
symbol: AHG20898.1
gene_biotype: protein_coding
description:
  Phosphonate metabolism protein PhnM; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15795
symbol: AHG20899.1
gene_biotype: protein_coding
description:
  Phosphonate ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15800
symbol: phnK
gene_biotype: protein_coding
description:
  Phosphonate C-P lyase system protein PhnK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15805
symbol: AHG20901.1
gene_biotype: protein_coding
description:
  Carbon-phosphorus lyase complex subunit PhnJ; Catalyzes the breakage of the C-P bond in alpha-D-ribose 1- methylphosphonate 5-phosphate (PRPn) forming alpha-D-ribose. Belongs to the PhnJ family.


ensembl_gene_id: Z042_15810
symbol: AHG20902.1
gene_biotype: protein_coding
description:
  Carbon-phosphorus lyase complex subunit PhnI; Required for the use of phosphonate and phosphite; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15815
symbol: phnH
gene_biotype: protein_coding
description:
  Carbon-phosphorus lyase complex subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15820
symbol: AHG20904.1
gene_biotype: protein_coding
description:
  Phosphonate C-P lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15825
symbol: AHG20905.2
gene_biotype: protein_coding
description:
  Phosphonate metabolism transcriptional regulator PhnF; May be involved in phosphonate uptake and biodegradation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15840
symbol: AHG20907.1
gene_biotype: protein_coding
description:
  Ribonucleoside-triphosphate reductase; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.


ensembl_gene_id: Z042_15845
symbol: AHG20908.1
gene_biotype: protein_coding
description:
  Ribonucleoside-triphosphate reductase; Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15860
symbol: AHG20911.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0213 family.


ensembl_gene_id: Z042_15875
symbol: AHG20913.1
gene_biotype: protein_coding
description:
  HEAT repeat protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15885
symbol: AHG20915.1
gene_biotype: protein_coding
description:
  4-aminobutyrate aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15890
symbol: AHG20916.1
gene_biotype: protein_coding
description:
  VWA containing CoxE family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15895
symbol: AHG20917.1
gene_biotype: protein_coding
description:
  SWIM zinc finger protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15935
symbol: AHG20925.1
gene_biotype: protein_coding
description:
  Hydrolase; Phosphotriesterase homology protein; PhP; YhfV; member of a family of proteins related to phosphotriesterase (PTE); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15950
symbol: AHG20927.1
gene_biotype: protein_coding
description:
  Trehalose-6-phosphate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15955
symbol: AHG20928.1
gene_biotype: protein_coding
description:
  PTS system trehalose(maltose)-specific transporter subunits IIBC; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15965
symbol: treR
gene_biotype: protein_coding
description:
  Regulates genes involved in trehalose metabolism; binds the intermediate trehalose-6-phosphate; binds a dimer; regulates treBC operon; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_15995
symbol: AHG20936.1
gene_biotype: protein_coding
description:
  Xanthine permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16005
symbol: AHG20938.1
gene_biotype: protein_coding
description:
  Deaminase; Metallo-dependent hydrolase superfamily; deaminase with metallo-dependent hydrolase domain; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16015
symbol: AHG20940.1
gene_biotype: protein_coding
description:
  beta-N-acetylhexosaminidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16150
symbol: AHG20962.1
gene_biotype: protein_coding
description:
  Ferrous iron transporter B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16170
symbol: AHG20965.1
gene_biotype: protein_coding
description:
  Has endoribonuclease activity on mRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16175
symbol: pyrI
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase regulatory subunit; Involved in allosteric regulation of aspartate carbamoyltransferase.


ensembl_gene_id: Z042_16180
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: Z042_16220
symbol: AHG20974.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: Z042_16225
symbol: rraB
gene_biotype: protein_coding
description:
  Regulator; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome.


ensembl_gene_id: Z042_16230
symbol: AHG20976.1
gene_biotype: protein_coding
description:
  tRNA hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16235
symbol: AHG20977.1
gene_biotype: protein_coding
description:
  Glucose-methanol-choline oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16245
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: Z042_16250
symbol: AHG20980.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit chi; Binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16255
symbol: pepA
gene_biotype: protein_coding
description:
  Multifunctional aminopeptidase A; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: Z042_16260
symbol: AHG20982.1
gene_biotype: protein_coding
description:
  Lipopolysaccharide ABC transporter permease; With LptBGC is involved in lipopolysaccharide export; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16265
symbol: AHG20983.1
gene_biotype: protein_coding
description:
  With LptABCF is involved in the transport of lipopolysaccharides; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16300
symbol: AHG20989.1
gene_biotype: protein_coding
description:
  Protein kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16310
symbol: AHG20991.1
gene_biotype: protein_coding
description:
  Nucleoside triphosphate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16335
symbol: AHG20996.1
gene_biotype: protein_coding
description:
  Restriction endonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16340
symbol: AHG20997.1
gene_biotype: protein_coding
description:
  Restriction endonuclease subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16400
symbol: AHG21008.1
gene_biotype: protein_coding
description:
  2-dehydro-3-deoxyphosphogluconate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16485
symbol: AHG21019.1
gene_biotype: protein_coding
description:
  2,5-diketo-D-gluconic acid reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16500
symbol: AHG21022.1
gene_biotype: protein_coding
description:
  Cytochrome D ubiquinol oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16510
symbol: AHG21024.1
gene_biotype: protein_coding
description:
  Response regulator in two-component regulatory system with CusS; regulates the copper efflux system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16530
symbol: AHG21028.1
gene_biotype: protein_coding
description:
  Biotin transporter BioY; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: Z042_16565
symbol: AHG21034.1
gene_biotype: protein_coding
description:
  5'-nucleotidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16570
symbol: AHG21035.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates the expression of the operons for the enzymes involved in galactarate, glucarate and glycerate utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16575
symbol: garD
gene_biotype: protein_coding
description:
  Galactarate dehydrogenase; Catalyzes the dehydration of galactarate to form 5-dehydro-4- deoxy-D-glucarate.


ensembl_gene_id: Z042_16580
symbol: AHG21037.1
gene_biotype: protein_coding
description:
  Glucarate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16585
symbol: gudD
gene_biotype: protein_coding
description:
  Glucarate dehydratase; Catalyzes the formation of 5-keto-4-deoxy-D-glucarate from glucarate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16590
symbol: garL
gene_biotype: protein_coding
description:
  alpha-dehydro-beta-deoxy-D-glucarate aldolase; Catalyzes the reversible retro-aldol cleavage of both 5-keto- 4-deoxy-D-glucarate and 2-keto-3-deoxy-D-glucarate to pyruvate and tartronic semialdehyde; Belongs to the HpcH/HpaI aldolase family. KDGluc aldolase subfamily.


ensembl_gene_id: Z042_16595
symbol: garR
gene_biotype: protein_coding
description:
  Tartronate semialdehyde reductase; Catalyzes the reduction of tatronate semialdehyde to D- glycerate; Belongs to the HIBADH-related family. 2-hydroxy-3- oxopropionate reductase subfamily.


ensembl_gene_id: Z042_16600
symbol: AHG21041.1
gene_biotype: protein_coding
description:
  Glycerate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycerate kinase type-1 family.


ensembl_gene_id: Z042_16630
symbol: AHG21044.1
gene_biotype: protein_coding
description:
  GTP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16700
symbol: AHG21055.1
gene_biotype: protein_coding
description:
  succinyl-CoA:3-ketoacid-CoA transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16720
symbol: AHG21059.1
gene_biotype: protein_coding
description:
  3-hydroxybutyrate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16725
symbol: AHG21060.1
gene_biotype: protein_coding
description:
  L,D-transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16735
symbol: AHG21061.1
gene_biotype: protein_coding
description:
  Acetoin utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16760
symbol: AHG21065.1
gene_biotype: protein_coding
description:
  Arylsulfatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16770
symbol: AHG21067.1
gene_biotype: protein_coding
description:
  APC family amino acid permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16790
symbol: AHG21071.1
gene_biotype: protein_coding
description:
  Homoprotocatechuate degradative operon repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16795
symbol: AHG21072.1
gene_biotype: protein_coding
description:
  2-hydroxyhepta-2,4-diene-1,7-dioate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16805
symbol: AHG21074.1
gene_biotype: protein_coding
description:
  Betaine-aldehyde dehydrogenase; Catalyzes the formation of betaine from betaine aldehyde; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16810
symbol: AHG21075.1
gene_biotype: protein_coding
description:
  3,4-dihydroxyphenylacetate 2,3-dioxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16815
symbol: AHG21076.1
gene_biotype: protein_coding
description:
  5-carboxymethyl-2-hydroxymuconate delta-isomerase; Catalyzes the formation of 5-oxo-pent-3-ene-1,2,5-tricarboxylic acid from 5-carboxymethyl-2-hydroxy-muconic acid; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16820
symbol: AHG21077.1
gene_biotype: protein_coding
description:
  2-oxo-hepta-3-ene-1,7-dioate hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16825
symbol: AHG21078.1
gene_biotype: protein_coding
description:
  4-hydroxy-2-oxo-heptane-1,7-dioate aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HpcH/HpaI aldolase family.


ensembl_gene_id: Z042_16830
symbol: AHG21079.1
gene_biotype: protein_coding
description:
  4-hydroxyphenylacetate permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16835
symbol: AHG21080.1
gene_biotype: protein_coding
description:
  4-hydroxyphenylacetate catabolism regulator HpaA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16840
symbol: AHG21081.1
gene_biotype: protein_coding
description:
  Pyoverdin chromophore biosynthetic protein pvcC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16845
symbol: hpaC
gene_biotype: protein_coding
description:
  4-hydroxyphenylacetate 3-monooxygenase; Catalyzes the reduction of MN, FAD and riboflavin by NADH; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16850
symbol: AHG21083.1
gene_biotype: protein_coding
description:
  This protein has no known enzymatic function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16885
symbol: rsmC
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Specifically methylates the guanine in position 1207 of 16S rRNA in the 30S particle; Belongs to the methyltransferase superfamily. RsmC family.


ensembl_gene_id: Z042_16890
symbol: AHG22882.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit psi; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is unknown.


ensembl_gene_id: Z042_16895
symbol: rimI
gene_biotype: protein_coding
description:
  Ribosomal-protein-alanine acetyltransferase; Acetylates the N-terminal alanine of ribosomal protein S18.


ensembl_gene_id: Z042_16900
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: Z042_16905
symbol: AHG21090.1
gene_biotype: protein_coding
description:
  Periplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16915
symbol: AHG21092.1
gene_biotype: protein_coding
description:
  Stress-response protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16920
symbol: AHG21093.1
gene_biotype: protein_coding
description:
  Deoxyribonuclease YjjV; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16925
symbol: AHG21094.1
gene_biotype: protein_coding
description:
  Nucleoside transporter NupC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family.


ensembl_gene_id: Z042_16930
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 2 subfamily.


ensembl_gene_id: Z042_16935
symbol: deoA
gene_biotype: protein_coding
description:
  Thymidine phosphorylase; The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the thymidine/pyrimidine-nucleoside phosphorylase family.


ensembl_gene_id: Z042_16940
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: Z042_16945
symbol: deoD
gene_biotype: protein_coding
description:
  Purine nucleoside phosphorylase; Catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16960
symbol: serB
gene_biotype: protein_coding
description:
  Phosphoserine phosphatase; Catalyzes the formation of serine from O-phosphoserine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16965
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: Z042_16970
symbol: AHG21102.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Catalyzes the formation of NAD(+) from nicotinamide ribonucleotide; catalyzes the formation of nicotinamide mononucleotide from nicotinamide riboside; also has a regulatory function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16990
symbol: AHG21105.1
gene_biotype: protein_coding
description:
  ABC transporter ATP-binding protein; ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_16995
symbol: AHG21106.2
gene_biotype: protein_coding
description:
  Carbonate dehydratase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17000
symbol: AHG21107.1
gene_biotype: protein_coding
description:
  Lytic murein transglycosylase; Catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17005
symbol: trpR
gene_biotype: protein_coding
description:
  Trp operon repressor; This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region.


ensembl_gene_id: Z042_17010
symbol: yjjX
gene_biotype: protein_coding
description:
  Inositol monophosphatase; Phosphatase that hydrolyzes non-canonical purine nucleotides such as XTP and ITP to their respective diphosphate derivatives. Probably excludes non-canonical purines from DNA/RNA precursor pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions.


ensembl_gene_id: Z042_17015
symbol: gpmB
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; Catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phosphoglycerate mutase family. GpmB subfamily.


ensembl_gene_id: Z042_17020
symbol: AHG21111.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; AraC family; binds to the right arm of the replication origin oriC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17030
symbol: AHG21113.1
gene_biotype: protein_coding
description:
  TorR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17035
symbol: trmJ-2
gene_biotype: protein_coding
description:
  RNA methyltransferase; Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA.


ensembl_gene_id: Z042_17040
symbol: thrA
gene_biotype: protein_coding
description:
  Aspartate kinase; Multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17045
symbol: thrB
gene_biotype: protein_coding
description:
  Serine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: Z042_17050
symbol: AHG21117.1
gene_biotype: protein_coding
description:
  Threonine synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17055
symbol: AHG21118.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0246 family.


ensembl_gene_id: Z042_17065
symbol: mogA
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MogA; Forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17090
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: Z042_17095
symbol: nhaA
gene_biotype: protein_coding
description:
  pH-dependent sodium/proton antiporter; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaA Na(+)/H(+) (TC 2.A.33) antiporter family.


ensembl_gene_id: Z042_17100
symbol: nhaR
gene_biotype: protein_coding
description:
  Na+/H+ antiporter regulatory protein; activates the genes nhaA and osmC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: Z042_17115
symbol: AHG21128.1
gene_biotype: protein_coding
description:
  FMN adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ribF family.


ensembl_gene_id: Z042_17120
symbol: ileS
gene_biotype: protein_coding
description:
  isoleucine--tRNA ligase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: Z042_17125
symbol: lspA
gene_biotype: protein_coding
description:
  Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: Z042_17130
symbol: AHG21131.1
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; Rotamase; accelerates isomerization of the peptidyl prolyl bond, involved in the folding of proteases; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17135
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis.


ensembl_gene_id: Z042_17140
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: Z042_17145
symbol: carA
gene_biotype: protein_coding
description:
  Carbamoyl phosphate synthase small subunit; Catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17150
symbol: carB
gene_biotype: protein_coding
description:
  Carbamoyl phosphate synthase large subunit; Four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17155
symbol: AHG21136.1
gene_biotype: protein_coding
description:
  Lysine transporter LysE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17170
symbol: folA
gene_biotype: protein_coding
description:
  Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis.


ensembl_gene_id: Z042_17180
symbol: AHG21140.1
gene_biotype: protein_coding
description:
  Transcriptional initiation protein Tat; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17185
symbol: apaH
gene_biotype: protein_coding
description:
  Diadenosine tetraphosphatase; Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP; Belongs to the Ap4A hydrolase family.


ensembl_gene_id: Z042_17190
symbol: apaG
gene_biotype: protein_coding
description:
  Heavy metal transporter; Protein associated with Co2+ and Mg2+ efflux; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17195
symbol: ksgA
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: Z042_17200
symbol: pdxA
gene_biotype: protein_coding
description:
  4-hydroxythreonine-4-phosphate dehydrogenase; Catalyzes the NAD(P)-dependent oxidation of 4-(phosphooxy)-L- threonine (HTP) into 2-amino-3-oxo-4-(phosphooxy)butyric acid which spontaneously decarboxylates to form 3-amino-2-oxopropyl phosphate (AHAP).


ensembl_gene_id: Z042_17205
symbol: surA
gene_biotype: protein_coding
description:
  Peptidylprolyl isomerase; Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation.


ensembl_gene_id: Z042_17210
symbol: lptD
gene_biotype: protein_coding
description:
  LPS biosynthesis protein; Together with LptE, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane.


ensembl_gene_id: Z042_17215
symbol: djlA
gene_biotype: protein_coding
description:
  Dna-J like membrane chaperone protein; Regulatory DnaK co-chaperone. Direct interaction between DnaK and DjlA is needed for the induction of the wcaABCDE operon, involved in the synthesis of a colanic acid polysaccharide capsule, possibly through activation of the RcsB/RcsC phosphotransfer signaling pathway. The colanic acid capsule may help the bacterium survive conditions outside the host.


ensembl_gene_id: Z042_17220
symbol: AHG21148.1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridylate synthase; Catalyzes the synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17230
symbol: AHG21149.1
gene_biotype: protein_coding
description:
  PAAR protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17320
symbol: AHG21163.1
gene_biotype: protein_coding
description:
  Phosphotyrosine protein phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: Z042_17330
symbol: AHG21165.1
gene_biotype: protein_coding
description:
  Entry exclusion protein 2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17335
symbol: AHG21166.1
gene_biotype: protein_coding
description:
  In Escherichia coli this gene is induced by carbon starvation and depends on sigma S and cAMP-CRP; the structure of the Gab protein shows it is a member of non-heme iron (II)-dependent oxygenase superfamily which includes clavamini acid synthases; forms homotetramers in solution; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17345
symbol: AHG21167.1
gene_biotype: protein_coding
description:
  Regulator of gab gene expression; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17375
symbol: AHG21173.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17380
symbol: AHG21174.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Z042_17390
symbol: AHG21176.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17405
symbol: rapA
gene_biotype: protein_coding
description:
  ATP-dependent helicase; Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair; Belongs to the SNF2/RAD54 helicase family. RapA subfamily.


ensembl_gene_id: Z042_17410
symbol: AHG21179.1
gene_biotype: protein_coding
description:
  Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17420
symbol: AHG21181.1
gene_biotype: protein_coding
description:
  Acetolactate synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17425
symbol: AHG21182.1
gene_biotype: protein_coding
description:
  Acetolactate synthase catalytic subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17430
symbol: thiQ
gene_biotype: protein_coding
description:
  Thiamine ABC transporter ATP-binding protein; Part of the ABC transporter complex ThiBPQ involved in thiamine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Thiamine importer (TC 3.A.1.19.1) family.


ensembl_gene_id: Z042_17435
symbol: thiP
gene_biotype: protein_coding
description:
  Permease; with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell; repressed in presence of exogenous thiamine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17440
symbol: tbpA
gene_biotype: protein_coding
description:
  Thiamine ABC transporter substrate-binding protein; Part of the thiamine and TPP transport system tbpA-thiPQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17445
symbol: sgrR
gene_biotype: protein_coding
description:
  Transcriptional regulator SgrR; Activates the small RNA gene sgrS under glucose-phosphate stress conditions as well as yfdZ. Represses its own transcription under both stress and non-stress conditions. Might act as a sensor of the intracellular accumulation of phosphoglucose by binding these molecules in its C-terminal solute-binding domain.


ensembl_gene_id: Z042_17465
symbol: leuD
gene_biotype: protein_coding
description:
  Isopropylmalate isomerase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 1 subfamily.


ensembl_gene_id: Z042_17470
symbol: leuC
gene_biotype: protein_coding
description:
  Isopropylmalate isomerase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: Z042_17475
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: Z042_17480
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: Z042_17485
symbol: leuO
gene_biotype: protein_coding
description:
  Transcriptional regulator; Activator for leuABCD operon; member of LysR family of transcriptional activators; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: Z042_17490
symbol: AHG21195.1
gene_biotype: protein_coding
description:
  Long-chain fatty acid--CoA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17495
symbol: AHG21196.1
gene_biotype: protein_coding
description:
  Acetolactate synthase 3 catalytic subunit; Catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17500
symbol: ilvH
gene_biotype: protein_coding
description:
  Acetolactate synthase 3 regulatory subunit; With IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17505
symbol: AHG21197.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Binds D-fructose as an inducer; involved in regulation of operons for central pathways of carbon metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17515
symbol: mraZ
gene_biotype: protein_coding
description:
  Cell division protein MraZ; Negatively regulates its own expression and that of the subsequent genes in the proximal part of the division and cell wall (dcw) gene cluster. Acts by binding directly to DNA. May also regulate the expression of genes outside the dcw cluster.


ensembl_gene_id: Z042_17520
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: Z042_17525
symbol: ftsL
gene_biotype: protein_coding
description:
  Cell division protein FtsL; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: Z042_17530
symbol: ftsI
gene_biotype: protein_coding
description:
  Cell division protein FtsI; Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily.


ensembl_gene_id: Z042_17535
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: Z042_17540
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: Z042_17545
symbol: mraY
gene_biotype: protein_coding
description:
  phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: Z042_17550
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: Z042_17555
symbol: ftsW
gene_biotype: protein_coding
description:
  Cell division protein FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily.


ensembl_gene_id: Z042_17560
symbol: murG
gene_biotype: protein_coding
description:
  UDP-diphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: Z042_17575
symbol: ftsQ
gene_biotype: protein_coding
description:
  Cell division protein FtsQ; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic. May control correct divisome assembly.


ensembl_gene_id: Z042_17580
symbol: ftsA
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: Z042_17585
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: Z042_17590
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: Z042_17600
symbol: secM
gene_biotype: protein_coding
description:
  Secretion monitor; Regulates secA expression by translational coupling of the secM secA operon. Translational pausing at a specific Pro residue 5 residues before the end of the protein may allow disruption of a mRNA repressor helix that normally suppresses secA translation initiation. Belongs to the SecM family.


ensembl_gene_id: Z042_17605
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving both as a receptor for the preprotein-SecB complex and as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane.


ensembl_gene_id: Z042_17610
symbol: AHG21217.1
gene_biotype: protein_coding
description:
  Nucleoside triphosphate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family.


ensembl_gene_id: Z042_17630
symbol: yacG
gene_biotype: protein_coding
description:
  DNA gyrase inhibitor; Inhibits all the catalytic activities of DNA gyrase by preventing its interaction with DNA. Acts by binding directly to the C- terminal domain of GyrB, which probably disrupts DNA binding by the gyrase.


ensembl_gene_id: Z042_17635
symbol: zapD
gene_biotype: protein_coding
description:
  Hypothetical protein; Cell division factor that enhances FtsZ-ring assembly. Directly interacts with FtsZ and promotes bundling of FtsZ protofilaments, with a reduction in FtsZ GTPase activity.


ensembl_gene_id: Z042_17645
symbol: guaC
gene_biotype: protein_coding
description:
  Guanosine 5'-monophosphate oxidoreductase; Catalyzes the irreversible NADPH-dependent deamination of GMP to IMP. It functions in the conversion of nucleobase, nucleoside and nucleotide derivatives of G to A nucleotides, and in maintaining the intracellular balance of A and G nucleotides.


ensembl_gene_id: Z042_17650
symbol: AHG21221.1
gene_biotype: protein_coding
description:
  Type IV pilin biogenesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17655
symbol: AHG21222.2
gene_biotype: protein_coding
description:
  Transporter HofB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17660
symbol: AHG21223.1
gene_biotype: protein_coding
description:
  Major pilin subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17665
symbol: AHG21224.1
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide pyrophosphorylase; Catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NadC/ModD family.


ensembl_gene_id: Z042_17670
symbol: AHG21225.1
gene_biotype: protein_coding
description:
  Regulatory protein AmpE; Involved in regulation of beta-lactamase; putative signaling protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17675
symbol: hemL
gene_biotype: protein_coding
description:
  Glutamate-1-semialdehyde aminotransferase; Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17680
symbol: erpA
gene_biotype: protein_coding
description:
  Iron-sulfur cluster insertion protein ErpA; Required for insertion of 4Fe-4S clusters for at least IspG.


ensembl_gene_id: Z042_17690
symbol: btuF
gene_biotype: protein_coding
description:
  Vitamin B12-binding protein; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Binds vitamin B12 and delivers it to the periplasmic surface of BtuC.


ensembl_gene_id: Z042_17695
symbol: mtnN
gene_biotype: protein_coding
description:
  5'-methylthioadenosine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Also cleaves 5'-deoxyadenosine, a toxic by-product of radical S-adenosylmethionine (SAM) enzymes, into 5-deoxyribose and adenine. Thus, is required for in vivo function of the radical SAM enzymes biotin synthase and lipoic acid synthase, that are inhibited by 5'-deoxyadenosine accumulation. Belongs to the PNP/U [...]


ensembl_gene_id: Z042_17700
symbol: dgt
gene_biotype: protein_coding
description:
  Deoxyguanosinetriphosphate triphosphohydrolase; dGTPase preferentially hydrolyzes dGTP over the other canonical NTPs; Belongs to the dGTPase family. Type 1 subfamily.


ensembl_gene_id: Z042_17705
symbol: AHG21232.1
gene_biotype: protein_coding
description:
  Serine endoprotease; Protease Do; required at high temperature; degrades damaged proteins; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S1C family.


ensembl_gene_id: Z042_17710
symbol: AHG21233.1
gene_biotype: protein_coding
description:
  Histidine kinase; Part of the two-component regulatory system with UvrY; involved in the regulation of carbon metabolism via the csrA/csrB regulatory system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17715
symbol: rumA
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily.


ensembl_gene_id: Z042_17725
symbol: mazG
gene_biotype: protein_coding
description:
  Nucleoside triphosphate hydrolase; Functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17730
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthetase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: Z042_17735
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis.


ensembl_gene_id: Z042_17745
symbol: proY
gene_biotype: protein_coding
description:
  Cryptic permease that may be involved in the transport of proline across the inner membrane; in Salmonella typhimurium, the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17750
symbol: hutH
gene_biotype: protein_coding
description:
  Catalyzes the degradation of histidine to urocanate and ammmonia; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17760
symbol: queE
gene_biotype: protein_coding
description:
  Pyrroloquinoline quinone biosynthesis protein; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: Z042_17765
symbol: AHG21243.1
gene_biotype: protein_coding
description:
  6-carboxy-5,6,7,8-tetrahydropterin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17770
symbol: cysJ
gene_biotype: protein_coding
description:
  Sulfite reductase subunit alpha; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. The flavoprotein component catalyzes the electron flow from NADPH -> FAD -> FMN to the hemoprotein component. Belongs to the NADPH-dependent sulphite reductase flavoprotein subunit CysJ family. In the N-terminal section; belongs to the flavodoxin family.


ensembl_gene_id: Z042_17775
symbol: cysI
gene_biotype: protein_coding
description:
  Sulfite reductase subunit beta; Component of the sulfite reductase complex that catalyzes the 6-electron reduction of sulfite to sulfide. This is one of several activities required for the biosynthesis of L-cysteine from sulfate. Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: Z042_17780
symbol: cysH
gene_biotype: protein_coding
description:
  Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.


ensembl_gene_id: Z042_17810
symbol: AHG21250.1
gene_biotype: protein_coding
description:
  Head-tail adaptor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17830
symbol: AHG21254.1
gene_biotype: protein_coding
description:
  Bacteriophage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17920
symbol: cysG
gene_biotype: protein_coding
description:
  Sirohydrochlorin ferrochelatase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family.  In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family.


ensembl_gene_id: Z042_17925
symbol: cysD
gene_biotype: protein_coding
description:
  Sulfate adenylyltransferase subunit 2; With CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17930
symbol: cysN
gene_biotype: protein_coding
description:
  Sulfate adenylyltransferase subunit 1; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.


ensembl_gene_id: Z042_17945
symbol: AHG21274.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_17960
symbol: ftsB
gene_biotype: protein_coding
description:
  Cell division protein FtsB; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.


ensembl_gene_id: Z042_17965
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). Belongs to the IspD/TarI cytidylyltransferase family. IspD subfamily.


ensembl_gene_id: Z042_17970
symbol: ispF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP).


ensembl_gene_id: Z042_17975
symbol: truD
gene_biotype: protein_coding
description:
  tRNA pseudouridine synthase D; Responsible for synthesis of pseudouridine from uracil-13 in transfer RNAs; Belongs to the pseudouridine synthase TruD family.


ensembl_gene_id: Z042_17980
symbol: surE
gene_biotype: protein_coding
description:
  Stationary phase survival protein SurE; Nucleotidase with a broad substrate specificity as it can dephosphorylate various ribo- and deoxyribonucleoside 5'-monophosphates and ribonucleoside 3'-monophosphates with highest affinity to 3'-AMP. Also hydrolyzes polyphosphate (exopolyphosphatase activity) with the preference for short-chain-length substrates (P20-25). Might be involved in the regulation of dNTP and NTP pools, and in the turnover of 3'-mononucleotides produced by numerous intracellular RNases (T1, T2, and F) during the degradation of various RNAs.


ensembl_gene_id: Z042_17985
symbol: pcm
gene_biotype: protein_coding
description:
  protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.


ensembl_gene_id: Z042_17995
symbol: rpoS
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor RpoS; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the master transcriptional regulator of the stationary phase and the general stress response.


ensembl_gene_id: Z042_18000
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: Z042_18035
symbol: AHG21291.1
gene_biotype: protein_coding
description:
  Zinc resistance protein; Binds zinc. Could be an important component of the zinc- balancing mechanism; Belongs to the ZraP family.


ensembl_gene_id: Z042_18040
symbol: AHG21292.1
gene_biotype: protein_coding
description:
  Sensor protein ZraS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18045
symbol: AHG21293.1
gene_biotype: protein_coding
description:
  DNA-binding response regulator in two-component regulatory system with ZraS; response regulator/sigma54 interaction protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18055
symbol: AHG21295.1
gene_biotype: protein_coding
description:
  Murein hydrolase effector LrgB; Membrane-bound lytic murein transglycosylase B; catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18065
symbol: recA
gene_biotype: protein_coding
description:
  Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: Z042_18075
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain; Belongs to the class-II aminoacyl-tRNA synthetase family.


ensembl_gene_id: Z042_18080
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator; A key translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Mediates global changes in gene expression, shifting from rapid growth to stress survival by linking envelope stress, the stringent response and the catabolite repression systems. Usually binds in the 5'-UTR; binding at or near the Shine-Dalgarno sequence prevents ribosome-binding, repressing translation, binding elsewhere in the 5'-UTR can activate translation and/or stabilize the mRNA. Its function is antagonized by small RNA(s).


ensembl_gene_id: Z042_18105
symbol: AHG21301.1
gene_biotype: protein_coding
description:
  6-phosphogluconate phosphatase; YqaB; catalyzes the dephosphorylation of fructose 1-phosphate, 6-phosphogluconate and p-nitrophenyl phosphate (pNPP); presents beta-phosphoglucomutase activity at a lower extent; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18115
symbol: gshA
gene_biotype: protein_coding
description:
  Glutamate--cysteine ligase; Involved in the first step of glutathione biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutamate--cysteine ligase type 1 family. Type 1 subfamily.


ensembl_gene_id: Z042_18120
symbol: luxS
gene_biotype: protein_coding
description:
  S-ribosylhomocysteinase; Involved in the synthesis of autoinducer 2 (AI-2) which is secreted by bacteria and is used to communicate both the cell density and the metabolic potential of the environment. The regulation of gene expression in response to changes in cell density is called quorum sensing. Catalyzes the transformation of S-ribosylhomocysteine (RHC) to homocysteine (HC) and 4,5-dihydroxy-2,3-pentadione (DPD). Belongs to the LuxS family.


ensembl_gene_id: Z042_18135
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Interaction with FtsY leads to the transfer of the RNC complex to the Sec translocase for insertion into the membrane, the hydrolysis of GTP by both Ffh and FtsY, and the dissociation of the SRP-FtsY complex into the individual components; Belo [...]


ensembl_gene_id: Z042_18140
symbol: rpsP
gene_biotype: protein_coding
description:
  30S ribosomal protein S16; Binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bS16 family.


ensembl_gene_id: Z042_18145
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA-processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: Z042_18155
symbol: rplS
gene_biotype: protein_coding
description:
  50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: Z042_18185
symbol: AHG21315.1
gene_biotype: protein_coding
description:
  Phospho-2-dehydro-3-deoxyheptonate aldolase; Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D-arabino- heptulosonate-7-phosphate (DAHP).


ensembl_gene_id: Z042_18190
symbol: tyrA
gene_biotype: protein_coding
description:
  Chorismate mutase; Catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18195
symbol: pheA
gene_biotype: protein_coding
description:
  Chorismate mutase; Catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18200
symbol: AHG21318.1
gene_biotype: protein_coding
description:
  Translation inhibitor protein RaiA; Associated with 30S ribosomal subunit; interferes with translation elongation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18205
symbol: bamD
gene_biotype: protein_coding
description:
  Membrane biogenesis protein; Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane. Constitutes, with BamA, the core component of the assembly machinery.


ensembl_gene_id: Z042_18210
symbol: rluD
gene_biotype: protein_coding
description:
  23S rRNA pseudouridylate synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: Z042_18215
symbol: AHG21321.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the multicopper oxidase YfiH/RL5 family.


ensembl_gene_id: Z042_18220
symbol: clpB
gene_biotype: protein_coding
description:
  Protein disaggregation chaperone; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: Z042_18255
symbol: mltD
gene_biotype: protein_coding
description:
  Lytic murein transglycosylase; Catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; may play a role in recycling muropeptides during cell division and/or cell elongation; in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18260
symbol: gloB
gene_biotype: protein_coding
description:
  Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.


ensembl_gene_id: Z042_18275
symbol: dnaQ
gene_biotype: protein_coding
description:
  DNA polymerase III subunit epsilon; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'- 5' exonuclease.


ensembl_gene_id: Z042_18290
symbol: AHG21329.2
gene_biotype: protein_coding
description:
  Iron utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18310
symbol: AHG21333.1
gene_biotype: protein_coding
description:
  Carbon-nitrogen hydrolase; NAD(P)-binding; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18315
symbol: AHG21334.1
gene_biotype: protein_coding
description:
  Methionine aminotransferase; Catalyzes the transfer of an amino moiety; preference for methionine followed by histidine and phenylalanine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18320
symbol: mtnB
gene_biotype: protein_coding
description:
  Methylthioribulose-1-phosphate dehydratase; Catalyzes the dehydration of methylthioribulose-1-phosphate (MTRu-1-P) into 2,3-diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P). Belongs to the aldolase class II family. MtnB subfamily.


ensembl_gene_id: Z042_18325
symbol: mtnC
gene_biotype: protein_coding
description:
  Haloacid dehalogenase; Bifunctional enzyme that catalyzes the enolization of 2,3- diketo-5-methylthiopentyl-1-phosphate (DK-MTP-1-P) into the intermediate 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate (HK- MTPenyl-1-P), which is then dephosphorylated to form the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene). Belongs to the HAD-like hydrolase superfamily. MasA/MtnC family.


ensembl_gene_id: Z042_18330
symbol: mtnD
gene_biotype: protein_coding
description:
  Acireductone dioxygenase; Catalyzes 2 different reactions between oxygene and the acireductone 1,2-dihydroxy-3-keto-5-methylthiopentene (DHK-MTPene) depending upon the metal bound in the active site. Fe-containing acireductone dioxygenase (Fe-ARD) produces formate and 2-keto-4- methylthiobutyrate (KMTB), the alpha-ketoacid precursor of methionine in the methionine recycle pathway. Ni-containing acireductone dioxygenase (Ni-ARD) produces methylthiopropionate, carbon monoxide and formate, and does not lie on the methionine recycle pathway.


ensembl_gene_id: Z042_18360
symbol: mtnA
gene_biotype: protein_coding
description:
  Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: Z042_18365
symbol: mtnK
gene_biotype: protein_coding
description:
  Methylthioribose kinase; Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate.


ensembl_gene_id: Z042_18370
symbol: fadE
gene_biotype: protein_coding
description:
  acyl-CoA dehydrogenase; Functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18375
symbol: gmhA
gene_biotype: protein_coding
description:
  Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate.


ensembl_gene_id: Z042_18380
symbol: AHG21347.1
gene_biotype: protein_coding
description:
  Glutamine amidotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18385
symbol: AHG21348.1
gene_biotype: protein_coding
description:
  Transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18390
symbol: nqrA
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit A; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.


ensembl_gene_id: Z042_18395
symbol: nqrB
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit B; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.


ensembl_gene_id: Z042_18400
symbol: nqrC
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit C; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol.


ensembl_gene_id: Z042_18405
symbol: nqrD
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit D; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol; Belongs to the NqrDE/RnfAE family.


ensembl_gene_id: Z042_18415
symbol: nqrF
gene_biotype: protein_coding
description:
  Na(+)-translocating NADH-quinone reductase subunit F; NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na(+) ions from the cytoplasm to the periplasm. The first step is catalyzed by NqrF, which accepts electrons from NADH and reduces ubiquinone-1 to ubisemiquinone by a one-electron transfer pathway.


ensembl_gene_id: Z042_18430
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: Z042_18435
symbol: AHG21358.1
gene_biotype: protein_coding
description:
  Aminoacyl-histidine dipeptidase; Catalyzes the hydrolysis of Xaa-His dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18440
symbol: gpt
gene_biotype: protein_coding
description:
  Xanthine-guanine phosphoribosyltransferase; Acts on guanine, xanthine and to a lesser extent hypoxanthine; Belongs to the purine/pyrimidine phosphoribosyltransferase family. XGPT subfamily.


ensembl_gene_id: Z042_18445
symbol: frsA
gene_biotype: protein_coding
description:
  Fermentation/respiration switch protein; Forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc; FrsA may promote fermentation; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0255 family.


ensembl_gene_id: Z042_18450
symbol: crl
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to the sigma-S subunit of RNA polymerase, activating expression of sigma-S-regulated genes. Stimulates RNA polymerase holoenzyme formation and may bind to several other sigma factors, such as sigma-70 and sigma-32; Belongs to the Crl family.


ensembl_gene_id: Z042_18455
symbol: proB
gene_biotype: protein_coding
description:
  Gamma-glutamyl kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: Z042_18460
symbol: proA
gene_biotype: protein_coding
description:
  Gamma-glutamyl phosphate reductase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: Z042_18465
symbol: AHG21364.2
gene_biotype: protein_coding
description:
  Taurine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18470
symbol: AHG21365.1
gene_biotype: protein_coding
description:
  Taurine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18490
symbol: AHG21369.1
gene_biotype: protein_coding
description:
  SAM-dependent methlyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18495
symbol: AHG21370.1
gene_biotype: protein_coding
description:
  Lactoylglutathione lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18500
symbol: AHG21371.1
gene_biotype: protein_coding
description:
  With TehA confers resistance to tellurite; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18505
symbol: pagP
gene_biotype: protein_coding
description:
  Lipid A palmitoyltransferase; Transfers a palmitate residue from the sn-1 position of a phospholipid to the N-linked hydroxymyristate on the proximal unit of lipid A or its precursors.


ensembl_gene_id: Z042_18520
symbol: AHG21375.1
gene_biotype: protein_coding
description:
  SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18525
symbol: aroL
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate.


ensembl_gene_id: Z042_18550
symbol: ppnP
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.


ensembl_gene_id: Z042_18570
symbol: AHG21385.1
gene_biotype: protein_coding
description:
  Ribose ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Z042_18600
symbol: AHG21391.1
gene_biotype: protein_coding
description:
  Fructokinase; Catalyzes phosphorylation of fructose; cytosolic enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18610
symbol: sbcC
gene_biotype: protein_coding
description:
  ATP-dependent dsDNA exonuclease; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SMC family. SbcC subfamily.


ensembl_gene_id: Z042_18615
symbol: sbcD
gene_biotype: protein_coding
description:
  Exonuclease SbcD; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: Z042_18620
symbol: AHG21395.1
gene_biotype: protein_coding
description:
  Transcriptional regulator PhoB; Two component response regulator for the phosphate regulon; PhoR phosphorylates PhoB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18625
symbol: phoR
gene_biotype: protein_coding
description:
  Phosphate regulon sensor protein; Membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18630
symbol: AHG21397.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18640
symbol: AHG21398.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter substrate-binding protein; Component of the transport system for branched-chain amino acids.


ensembl_gene_id: Z042_18650
symbol: AHG21400.1
gene_biotype: protein_coding
description:
  Maltodextrin glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: Z042_18665
symbol: AHG21403.1
gene_biotype: protein_coding
description:
  Ribonucleotide-diphosphate reductase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18675
symbol: AHG21405.1
gene_biotype: protein_coding
description:
  3-keto-L-gulonate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FGGY kinase family.


ensembl_gene_id: Z042_18735
symbol: AHG21412.1
gene_biotype: protein_coding
description:
  Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18740
symbol: acpH
gene_biotype: protein_coding
description:
  ACP phosphodiesterase; Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP; Belongs to the AcpH family.


ensembl_gene_id: Z042_18745
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: Z042_18750
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: Z042_18755
symbol: yajC
gene_biotype: protein_coding
description:
  Preprotein translocase subunit YajC; The SecYEG-SecDF-YajC-YidC holo-translocon (HTL) protein secretase/insertase is a supercomplex required for protein secretion, insertion of proteins into membranes, and assembly of membrane protein complexes. While the SecYEG complex is essential for assembly of a number of proteins and complexes, the SecDF-YajC-YidC subcomplex facilitates these functions.


ensembl_gene_id: Z042_18760
symbol: secD
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: Z042_18765
symbol: secF
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: Z042_18770
symbol: nrdR
gene_biotype: protein_coding
description:
  NrdR family transcriptional regulator; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: Z042_18775
symbol: ribD
gene_biotype: protein_coding
description:
  5-amino-6-(5-phosphoribosylamino)uracil reductase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: Z042_18780
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family.


ensembl_gene_id: Z042_18785
symbol: nusB
gene_biotype: protein_coding
description:
  Transcription antiterminator NusB; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: Z042_18790
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine monophosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: Z042_18795
symbol: AHG21424.2
gene_biotype: protein_coding
description:
  Phosphatidylglycerophosphatase; Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG).


ensembl_gene_id: Z042_18805
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: Z042_18810
symbol: AHG21427.1
gene_biotype: protein_coding
description:
  Geranyl transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FPP/GGPP synthase family.


ensembl_gene_id: Z042_18815
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: Z042_18820
symbol: thiI
gene_biotype: protein_coding
description:
  tRNA s(4)U8 sulfurtransferase; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS.


ensembl_gene_id: Z042_18830
symbol: AHG21431.1
gene_biotype: protein_coding
description:
  Oxidative-stress-resistance chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18835
symbol: AHG21432.1
gene_biotype: protein_coding
description:
  2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.


ensembl_gene_id: Z042_18840
symbol: AHG21433.1
gene_biotype: protein_coding
description:
  Nucleotide-binding protein; Nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0234 family.


ensembl_gene_id: Z042_18850
symbol: cyoE
gene_biotype: protein_coding
description:
  Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group.


ensembl_gene_id: Z042_18855
symbol: AHG21436.1
gene_biotype: protein_coding
description:
  Cytochrome C oxidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18860
symbol: AHG21437.1
gene_biotype: protein_coding
description:
  Cytochrome o ubiquinol oxidase subunit III; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18865
symbol: AHG21438.1
gene_biotype: protein_coding
description:
  Cytochrome o ubiquinol oxidase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the heme-copper respiratory oxidase family.


ensembl_gene_id: Z042_18870
symbol: AHG21439.1
gene_biotype: protein_coding
description:
  Ubiquinol oxidase subunit II; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18875
symbol: ampG
gene_biotype: protein_coding
description:
  Muropeptide transporter; In Escherichia coli this protein is a permease involved in peptidoglycan recycling; member of major facilitator superfamily; MFS; inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18885
symbol: AHG21442.1
gene_biotype: protein_coding
description:
  Positive transcriptional regulator of morphogenetic pathway; controlling several genes involved in oxidative stress, acid stress, heat shock, osmotic shock, and carbon-starvation stress; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BolA/IbaG family.


ensembl_gene_id: Z042_18890
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: Z042_18895
symbol: clpP
gene_biotype: protein_coding
description:
  Hypothetical protein; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: Z042_18900
symbol: clpX
gene_biotype: protein_coding
description:
  Clp protease ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: Z042_18905
symbol: lon
gene_biotype: protein_coding
description:
  DNA-binding protein; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: Z042_18910
symbol: AHG21447.1
gene_biotype: protein_coding
description:
  Transcriptional regulator HU subunit alpha; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: Z042_18920
symbol: AHG21449.1
gene_biotype: protein_coding
description:
  Competence protein ComEA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18925
symbol: AHG21450.1
gene_biotype: protein_coding
description:
  Thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18930
symbol: queC
gene_biotype: protein_coding
description:
  Queuosine biosynthesis protein QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.


ensembl_gene_id: Z042_18935
symbol: AHG21452.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18940
symbol: cof
gene_biotype: protein_coding
description:
  Thiamin pyrimidine pyrophosphate hydrolase; Catalyzes the hydrolysis of 4-amino-2-methyl-5- hydroxymethylpyrimidine pyrophosphate (HMP-PP) to 4-amino-2-methyl-5- hydroxymethylpyrimidine phosphate (HMP-P).


ensembl_gene_id: Z042_18955
symbol: AHG21456.1
gene_biotype: protein_coding
description:
  Multidrug ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18975
symbol: AHG21459.1
gene_biotype: protein_coding
description:
  Ammonium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18980
symbol: AHG21460.1
gene_biotype: protein_coding
description:
  acyl-CoA thioesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18985
symbol: AHG21461.1
gene_biotype: protein_coding
description:
  Methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_18995
symbol: AHG21462.1
gene_biotype: protein_coding
description:
  Gene expression modulator; With Hns involved in transcriptional regulation of hemolysin; non-specific DNA-binding protein which affects the production of multiple proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19000
symbol: AHG21463.1
gene_biotype: protein_coding
description:
  Biofilm formation regulator YbaJ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19005
symbol: rpmJ
gene_biotype: protein_coding
description:
  50S ribosomal protein L36; Smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19010
symbol: rpmE2
gene_biotype: protein_coding
description:
  50S ribosomal protein L31; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19020
symbol: AHG21467.1
gene_biotype: protein_coding
description:
  Multidrug transporter; With AcrD and TolC forms a transport system involved in resistance to a number of compounds including lipophilic antibiotics; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Z042_19025
symbol: AHG21468.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19040
symbol: AHG21471.1
gene_biotype: protein_coding
description:
  Prephenate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19050
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: Z042_19055
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase III subunits gamma and tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: Z042_19060
symbol: AHG21475.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: Z042_19065
symbol: recR
gene_biotype: protein_coding
description:
  Recombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: Z042_19075
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: Z042_19080
symbol: hemH
gene_biotype: protein_coding
description:
  Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.


ensembl_gene_id: Z042_19085
symbol: AHG21480.1
gene_biotype: protein_coding
description:
  Cation:proton antiport protein; YbaL; member of the CPA-2 family of antiporters; uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: Z042_19095
symbol: AHG21481.1
gene_biotype: protein_coding
description:
  Fosmidomycin resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19100
symbol: ushA
gene_biotype: protein_coding
description:
  5'-nucleotidase; Catalyzes the degradation of periplasmic UDP-glucose to uridine, glucose-1-phosphate and inorganic phosphate; specific for uridine nucleotides; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 5'-nucleotidase family.


ensembl_gene_id: Z042_19125
symbol: AHG21486.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.


ensembl_gene_id: Z042_19130
symbol: AHG21487.1
gene_biotype: protein_coding
description:
  Conjugal transfer protein TraB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19135
symbol: copA
gene_biotype: protein_coding
description:
  Copper-transporting ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19170
symbol: AHG21494.1
gene_biotype: protein_coding
description:
  Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Z042_19175
symbol: AHG21495.1
gene_biotype: protein_coding
description:
  Lysophospholipase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19195
symbol: purK
gene_biotype: protein_coding
description:
  Phosphoribosylaminoimidazole carboxylase; Catalyzes the ATP-dependent conversion of 5-aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5-carboxyaminoimidazole ribonucleotide (N5-CAIR).


ensembl_gene_id: Z042_19200
symbol: purE
gene_biotype: protein_coding
description:
  N5-carboxyaminoimidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: Z042_19205
symbol: lpxH
gene_biotype: protein_coding
description:
  UDP-2,3-diacylglucosamine hydrolase; Hydrolyzes the pyrophosphate bond of UDP-2,3- diacylglucosamine to yield 2,3-diacylglucosamine 1-phosphate (lipid X) and UMP by catalyzing the attack of water at the alpha-P atom. Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: Z042_19215
symbol: cysS
gene_biotype: protein_coding
description:
  cysteine--tRNA ligase; Catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-I aminoacyl-tRNA synthetase family.


ensembl_gene_id: Z042_19220
symbol: AHG21504.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates expression of genes involved in L-fucose utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19240
symbol: AHG21508.1
gene_biotype: protein_coding
description:
  L-fucose transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19245
symbol: fucA
gene_biotype: protein_coding
description:
  Fuculose phosphate aldolase; Involved in the degradation of L-fucose and D-arabinose. Catalyzes the reversible cleavage of L-fuculose 1-phosphate (Fuc1P) to yield dihydroxyacetone phosphate (DHAP) and L-lactaldehyde.


ensembl_gene_id: Z042_19250
symbol: AHG21510.1
gene_biotype: protein_coding
description:
  Ribosome-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19255
symbol: folD
gene_biotype: protein_coding
description:
  Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: Z042_19320
symbol: AHG21518.1
gene_biotype: protein_coding
description:
  Beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19325
symbol: AHG21519.1
gene_biotype: protein_coding
description:
  acetyl-CoA:acetoacetyl-CoA transferase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19330
symbol: AHG21520.1
gene_biotype: protein_coding
description:
  Acetate CoA-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19410
symbol: AHG21531.1
gene_biotype: protein_coding
description:
  Dihydrodipicolinate synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DapA family.


ensembl_gene_id: Z042_19415
symbol: AHG21532.1
gene_biotype: protein_coding
description:
  Signal transduction protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19435
symbol: AHG21536.1
gene_biotype: protein_coding
description:
  Heme utilization protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19510
symbol: AHG21548.1
gene_biotype: protein_coding
description:
  Cold-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19520
symbol: crcB
gene_biotype: protein_coding
description:
  Camphor resistance protein CrcB; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: Z042_19525
symbol: adrA
gene_biotype: protein_coding
description:
  Diguanylate cyclase; Catalyzes the conversion of 2 GTP into c-di-GMP; adrA overexpression induces cellulose biosynthesis, cell adherence to abiotic surfaces and swimming and swarming motility; AdrA acts post-transcriptionally on the bcsABZC operon activating cellulose biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19530
symbol: tatE
gene_biotype: protein_coding
description:
  Preprotein translocase subunit TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatE shares overlapping functions with TatA; Belongs to the TatA/E family. TatE subfamily.


ensembl_gene_id: Z042_19535
symbol: lipA
gene_biotype: protein_coding
description:
  Lipoyl synthase; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives.


ensembl_gene_id: Z042_19540
symbol: lipB
gene_biotype: protein_coding
description:
  Lipoate--protein ligase; Catalyzes the transfer of endogenously produced octanoic acid from octanoyl-acyl-carrier-protein onto the lipoyl domains of lipoate- dependent enzymes. Lipoyl-ACP can also act as a substrate although octanoyl-ACP is likely to be the physiological substrate.


ensembl_gene_id: Z042_19545
symbol: AHG21555.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0250 family.


ensembl_gene_id: Z042_19550
symbol: AHG21556.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase; Penicillin-binding protein 5; removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family.


ensembl_gene_id: Z042_19555
symbol: rlpA
gene_biotype: protein_coding
description:
  Rare lipoprotein A; Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides.


ensembl_gene_id: Z042_19560
symbol: mrdB
gene_biotype: protein_coding
description:
  Cell wall shape-determining protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: Z042_19565
symbol: mrdA
gene_biotype: protein_coding
description:
  Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily.


ensembl_gene_id: Z042_19570
symbol: rlmH
gene_biotype: protein_coding
description:
  50S rRNA methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: Z042_19575
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: Z042_19580
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: Z042_19595
symbol: holA
gene_biotype: protein_coding
description:
  DNA polymerase III subunit delta; Required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19600
symbol: lptE
gene_biotype: protein_coding
description:
  LPS biosynthesis protein; Together with LptD, is involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane. Required for the proper assembly of LptD. Binds LPS and may serve as the LPS recognition site at the outer membrane.


ensembl_gene_id: Z042_19605
symbol: leuS
gene_biotype: protein_coding
description:
  leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; Derived by automated computational  [...]


ensembl_gene_id: Z042_19620
symbol: artP
gene_biotype: protein_coding
description:
  Arginine transporter ATP-binding subunit; With ArtMQJI transports arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19625
symbol: AHG21569.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; With GltJLPS and GadC for glutamate and GltJLP, DctA and DcuAB for aspartate is involved in the transport of glutamate and aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19630
symbol: AHG21570.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; With GltIKL is involved in the transport of glutamate and aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19640
symbol: lnt
gene_biotype: protein_coding
description:
  Apolipoprotein acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.


ensembl_gene_id: Z042_19645
symbol: AHG21573.1
gene_biotype: protein_coding
description:
  Magnesium/cobalt efflux protein CorC; Involved in the transport of magnesium and cobalt ions; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19650
symbol: ybeY
gene_biotype: protein_coding
description:
  Metal-binding heat shock protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: Z042_19665
symbol: miaB
gene_biotype: protein_coding
description:
  (dimethylallyl)adenosine tRNA methylthiotransferase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: Z042_19670
symbol: ubiF
gene_biotype: protein_coding
description:
  2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol; functions in the biosynthesis of ubiquinone or coenzyme Q; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19705
symbol: asnB
gene_biotype: protein_coding
description:
  Functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19715
symbol: AHG21581.1
gene_biotype: protein_coding
description:
  UMP phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19720
symbol: AHG21582.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates the synthesis of glucosamine and N-acetylglucosamine by acting as a repressor of the nagEBACD operon and both a repressor and activator of the glmSU operon; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19725
symbol: nagA
gene_biotype: protein_coding
description:
  N-acetylglucosamine-6-phosphate deacetylase; Catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19730
symbol: nagB
gene_biotype: protein_coding
description:
  Glucosamine-6-phosphate deaminase; Catalyzes the reversible isomerization-deamination of glucosamine 6-phosphate (GlcN6P) to form fructose 6-phosphate (Fru6P) and ammonium ion.


ensembl_gene_id: Z042_19735
symbol: AHG21585.1
gene_biotype: protein_coding
description:
  PTS N-acetyl glucosamine transporter subunits IIABC; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19740
symbol: glnS
gene_biotype: protein_coding
description:
  glutamate--tRNA ligase; Catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19750
symbol: chiP
gene_biotype: protein_coding
description:
  Chitoporin; Outer membrane porin involved in the transport of chitooligosaccharides; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19760
symbol: fur
gene_biotype: protein_coding
description:
  Ferric uptake regulator; Negatively regulates a number of operons that encode enzymes involved in iron transport; activated by manganese; forms a homodimer; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Fur family.


ensembl_gene_id: Z042_19765
symbol: AHG21590.1
gene_biotype: protein_coding
description:
  Flavodoxin FldA; Low-potential electron donor to a number of redox enzymes. Belongs to the flavodoxin family.


ensembl_gene_id: Z042_19770
symbol: AHG21591.1
gene_biotype: protein_coding
description:
  LexA regulated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19800
symbol: seqA
gene_biotype: protein_coding
description:
  Replication initiation regulator SeqA; Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated.


ensembl_gene_id: Z042_19805
symbol: AHG21596.1
gene_biotype: protein_coding
description:
  Phosphoglucomutase; Catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19810
symbol: AHG21597.1
gene_biotype: protein_coding
description:
  PadR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19815
symbol: AHG21598.1
gene_biotype: protein_coding
description:
  PF12977 structural domain protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19820
symbol: AHG21599.1
gene_biotype: protein_coding
description:
  Response regulator in two-component regulatory system with KdpD; regulates the kdp operon involved in potassium transport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19825
symbol: AHG21600.1
gene_biotype: protein_coding
description:
  Sensor protein KdpD; Sensory histidine kinase in two-component regulatory system with KdpE; signal sensing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19830
symbol: kdpC
gene_biotype: protein_coding
description:
  Potassium-transporting ATPase subunit C; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit acts as a catalytic chaperone that increases the ATP-binding affinity of the ATP-hydrolyzing subunit KdpB by the formation of a transient KdpB/KdpC/ATP ternary complex.


ensembl_gene_id: Z042_19835
symbol: kdpB
gene_biotype: protein_coding
description:
  Potassium-transporting ATPase subunit B; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit is responsible for energy coupling to the transport system. Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IA subfamily.


ensembl_gene_id: Z042_19840
symbol: kdpA
gene_biotype: protein_coding
description:
  Potassium-transporting ATPase subunit A; Part of the high-affinity ATP-driven potassium transport (or Kdp) system, which catalyzes the hydrolysis of ATP coupled with the electrogenic transport of potassium into the cytoplasm. This subunit binds and transports the potassium across the cytoplasmic membrane.


ensembl_gene_id: Z042_19845
symbol: kdpF
gene_biotype: protein_coding
description:
  Potassium-transporting ATPase subunit F; One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19860
symbol: AHG21607.1
gene_biotype: protein_coding
description:
  Deoxyribodipyrimidine photolyase; UV-induced DNA repair; converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers; light dependent; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DNA photolyase family.


ensembl_gene_id: Z042_19865
symbol: AHG21608.1
gene_biotype: protein_coding
description:
  3',5'-cyclic-nucleotide phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19885
symbol: pxpA
gene_biotype: protein_coding
description:
  LamB/YcsF family protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.


ensembl_gene_id: Z042_19900
symbol: pcp
gene_biotype: protein_coding
description:
  Pyrrolidone-carboxylate peptidase; Removes 5-oxoproline from various penultimate amino acid residues except L-proline; Belongs to the peptidase C15 family.


ensembl_gene_id: Z042_19905
symbol: nei
gene_biotype: protein_coding
description:
  Endonuclease VIII; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized pyrimidines, such as thymine glycol, 5,6-dihydrouracil and 5,6-dihydrothymine. Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: Z042_19910
symbol: gltA
gene_biotype: protein_coding
description:
  Type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the citrate synthase family.


ensembl_gene_id: Z042_19915
symbol: AHG21618.1
gene_biotype: protein_coding
description:
  Succinate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19925
symbol: sdhA
gene_biotype: protein_coding
description:
  Part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.


ensembl_gene_id: Z042_19930
symbol: sdhB
gene_biotype: protein_coding
description:
  Part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19935
symbol: AHG21622.1
gene_biotype: protein_coding
description:
  2-oxoglutarate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19940
symbol: AHG21623.1
gene_biotype: protein_coding
description:
  Dihydrolipoamide succinyltransferase; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).


ensembl_gene_id: Z042_19945
symbol: sucC
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase subunit beta; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The beta subunit provides nucleotide specificity of the enzyme and binds the substrate succinate, while the binding sites for coenzyme A and phosphate are found in the alpha subunit.


ensembl_gene_id: Z042_19950
symbol: sucD
gene_biotype: protein_coding
description:
  succinyl-CoA synthetase subunit alpha; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.


ensembl_gene_id: Z042_19955
symbol: AHG21626.1
gene_biotype: protein_coding
description:
  Cytochrome d terminal oxidase subunit 1; Part of the aerobic respiratory chain; catalyzes the ubiquinol to ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19960
symbol: AHG21627.1
gene_biotype: protein_coding
description:
  Cytochrome d ubiquinol oxidase subunit 2; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19970
symbol: AHG21629.1
gene_biotype: protein_coding
description:
  Cytochrome bd biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19975
symbol: AHG21630.1
gene_biotype: protein_coding
description:
  acyl-CoA thioesterase; Catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters; physiological role remains unknown; involved in phospholipid metabolism; part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_19980
symbol: tolQ
gene_biotype: protein_coding
description:
  Colicin uptake protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. Required, with TolR, for the proton motive force-dependent activation of TolA and for TolA-Pal interaction.


ensembl_gene_id: Z042_19985
symbol: tolR
gene_biotype: protein_coding
description:
  Colicin uptake protein TolR; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. Required, with TolQ, for the proton motive force-dependent activation of TolA and for TolA-Pal interaction.


ensembl_gene_id: Z042_19995
symbol: tolB
gene_biotype: protein_coding
description:
  Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity. TolB occupies a key intermediary position in the Tol-Pal system because it communicates directly with both membrane-embedded components, Pal in the outer membrane and TolA in the inner membrane.


ensembl_gene_id: Z042_20000
symbol: pal
gene_biotype: protein_coding
description:
  Peptidoglycan-associated outer membrane lipoprotein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.


ensembl_gene_id: Z042_20005
symbol: cpoB
gene_biotype: protein_coding
description:
  Tol-pal system protein; Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division; Belongs to the CpoB family.


ensembl_gene_id: Z042_20025
symbol: nadA
gene_biotype: protein_coding
description:
  Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate; Belongs to the quinolinate synthase A family. Type 1 subfamily.


ensembl_gene_id: Z042_20030
symbol: AHG21638.1
gene_biotype: protein_coding
description:
  Involved in nicotinamide riboside transport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20035
symbol: AHG21639.1
gene_biotype: protein_coding
description:
  Zinc transporter ZitB; Involved in zinc efflux across the cytoplasmic membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20045
symbol: gpmA
gene_biotype: protein_coding
description:
  Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate; Belongs to the phosphoglycerate mutase family. BPG- dependent PGAM subfamily.


ensembl_gene_id: Z042_20055
symbol: galK
gene_biotype: protein_coding
description:
  Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.


ensembl_gene_id: Z042_20060
symbol: AHG21644.1
gene_biotype: protein_coding
description:
  Galactose-1-phosphate uridylyltransferase; Catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the galactose-1-phosphate uridylyltransferase type 1 family.


ensembl_gene_id: Z042_20070
symbol: AHG21645.1
gene_biotype: protein_coding
description:
  CAAX protease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20075
symbol: AHG21646.1
gene_biotype: protein_coding
description:
  Isochorismatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20080
symbol: AHG21647.1
gene_biotype: protein_coding
description:
  Molybdenum ABC transporter ATP-binding protein; Contains 2 ATP-binding cassettes; involved in the transport of molybdenum; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20085
symbol: AHG21648.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Represses the modABCD operon and activates the moaABCD and napFDAGHBC operons; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20090
symbol: acrZ
gene_biotype: protein_coding
description:
  Membrane protein; AcrA-AcrB-AcrZ-TolC is a drug efflux protein complex with a broad substrate specificity. This protein binds to AcrB and is required for efflux of some but not all substrates, suggesting it may influence the specificity of drug export.


ensembl_gene_id: Z042_20095
symbol: modA
gene_biotype: protein_coding
description:
  Molybdate transporter; With ModCB is involved in the high-affinity transport of molybdate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20100
symbol: modB
gene_biotype: protein_coding
description:
  Molybdate ABC transporter permease; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: Z042_20105
symbol: modC
gene_biotype: protein_coding
description:
  Molybdate transporter ATP-binding protein; Part of the ABC transporter complex ModABC involved in molybdenum import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Molybdate importer (TC 3.A.1.8) family.


ensembl_gene_id: Z042_20110
symbol: AHG21653.1
gene_biotype: protein_coding
description:
  Pyridoxal phosphate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20115
symbol: pgl
gene_biotype: protein_coding
description:
  6-phosphogluconolactonase; Catalyzes the hydrolysis of 6-phosphogluconolactone to 6- phosphogluconate.


ensembl_gene_id: Z042_20120
symbol: bioA
gene_biotype: protein_coding
description:
  Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.


ensembl_gene_id: Z042_20125
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: Z042_20130
symbol: bioF
gene_biotype: protein_coding
description:
  8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.


ensembl_gene_id: Z042_20135
symbol: bioC
gene_biotype: protein_coding
description:
  Biotin biosynthesis protein BioC; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway.


ensembl_gene_id: Z042_20140
symbol: bioD
gene_biotype: protein_coding
description:
  Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. Belongs to the dethiobiotin synthetase family.


ensembl_gene_id: Z042_20145
symbol: AHG21660.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20150
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: Z042_20160
symbol: AHG21663.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.


ensembl_gene_id: Z042_20165
symbol: moaA
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: Z042_20170
symbol: AHG21665.1
gene_biotype: protein_coding
description:
  Molybdopterin biosynthesis protein B; May be involved in the biosynthesis of molybdopterin. Belongs to the MoaB/Mog family.


ensembl_gene_id: Z042_20175
symbol: moaC
gene_biotype: protein_coding
description:
  Molybdenum cofactor biosynthesis protein MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: Z042_20180
symbol: moaD
gene_biotype: protein_coding
description:
  Molybdopterin synthase small subunit; Catalyzes the conversion of molybdopterin precursor Z into molybdopterin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20185
symbol: moaE
gene_biotype: protein_coding
description:
  Molybdopterin guanine dinucleotide biosynthesis protein MoaE; Catalyzes the conversion of molybdopterin precursor Z into molybdopterin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20190
symbol: AHG21669.1
gene_biotype: protein_coding
description:
  Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BI1 family.


ensembl_gene_id: Z042_20230
symbol: rhlE
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase RhlE; DEAD-box RNA helicase involved in ribosome assembly. Has RNA- dependent ATPase activity and unwinds double-stranded RNA.


ensembl_gene_id: Z042_20240
symbol: AHG21677.1
gene_biotype: protein_coding
description:
  Cytochrome C551; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20245
symbol: dusC
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase C; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines. Specifically modifies U16 in tRNAs. Belongs to the Dus family. DusC subfamily.


ensembl_gene_id: Z042_20255
symbol: AHG21679.1
gene_biotype: protein_coding
description:
  arpA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20260
symbol: AHG21680.1
gene_biotype: protein_coding
description:
  Mandelate racemase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mandelate racemase/muconate lactonizing enzyme family.


ensembl_gene_id: Z042_20275
symbol: AHG21683.1
gene_biotype: protein_coding
description:
  D-ala-D-ala transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20310
symbol: pbpG
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine endopeptidase; Specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S11 family.


ensembl_gene_id: Z042_20325
symbol: AHG21693.1
gene_biotype: protein_coding
description:
  UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20335
symbol: dld
gene_biotype: protein_coding
description:
  Lactate dehydrogenase; Catalyzes the oxidation of D-lactate to pyruvate. Belongs to the quinone-dependent D-lactate dehydrogenase family.


ensembl_gene_id: Z042_20355
symbol: AHG21697.1
gene_biotype: protein_coding
description:
  ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: Z042_20410
symbol: AHG21707.1
gene_biotype: protein_coding
description:
  Acetylserine transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20425
symbol: AHG21710.1
gene_biotype: protein_coding
description:
  Carboxymuconolactone decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20430
symbol: AHG21711.1
gene_biotype: protein_coding
description:
  Bacilysin biosynthesis protein BacA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20440
symbol: AHG21713.1
gene_biotype: protein_coding
description:
  Coenzyme F390 synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20450
symbol: AHG21715.1
gene_biotype: protein_coding
description:
  Stress responsive protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20475
symbol: AHG21718.1
gene_biotype: protein_coding
description:
  Suppressor of fused protein (SUFU); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20485
symbol: AHG21719.1
gene_biotype: protein_coding
description:
  L-galactonate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20495
symbol: AHG21721.1
gene_biotype: protein_coding
description:
  Galactonate oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20500
symbol: AHG21722.1
gene_biotype: protein_coding
description:
  Altronate oxidoreductase; Catalyzes the formation of D-tagaturonate from D-altronate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20505
symbol: phnC
gene_biotype: protein_coding
description:
  Phosphonate ABC transporter ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.


ensembl_gene_id: Z042_20510
symbol: AHG21724.1
gene_biotype: protein_coding
description:
  Phosphonate ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20515
symbol: AHG21725.1
gene_biotype: protein_coding
description:
  Phosphonate ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20575
symbol: AHG21734.1
gene_biotype: protein_coding
description:
  Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20590
symbol: AHG21737.1
gene_biotype: protein_coding
description:
  Pentose kinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FGGY kinase family.


ensembl_gene_id: Z042_20595
symbol: deoC-2
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: Z042_20610
symbol: AHG21741.1
gene_biotype: protein_coding
description:
  D-amino acid aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20620
symbol: sseA
gene_biotype: protein_coding
description:
  3-mercaptopyruvate sulfurtransferase; Catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20625
symbol: AHG21744.1
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutT; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20630
symbol: AHG21745.1
gene_biotype: protein_coding
description:
  Purine nucleoside phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20645
symbol: AHG21748.1
gene_biotype: protein_coding
description:
  Myo-inositol 2-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20650
symbol: AHG21749.1
gene_biotype: protein_coding
description:
  Fatty acid desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20660
symbol: AHG21751.2
gene_biotype: protein_coding
description:
  Osmoprotectant uptake system permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20665
symbol: AHG21752.1
gene_biotype: protein_coding
description:
  ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20700
symbol: AHG21759.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20705
symbol: AHG21760.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20710
symbol: AHG21761.1
gene_biotype: protein_coding
description:
  Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Gram-negative porin family.


ensembl_gene_id: Z042_20725
symbol: AHG21764.1
gene_biotype: protein_coding
description:
  Multidrug DMT transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20755
symbol: AHG21769.1
gene_biotype: protein_coding
description:
  Chromosome partitioning protein ParA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20765
symbol: AHG21771.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Belongs to the AcsB/BcsB family.


ensembl_gene_id: Z042_20775
symbol: AHG21773.1
gene_biotype: protein_coding
description:
  Cellulose synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20780
symbol: AHG21774.1
gene_biotype: protein_coding
description:
  Endoglucanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 8 (cellulase D) family.


ensembl_gene_id: Z042_20790
symbol: AHG21776.1
gene_biotype: protein_coding
description:
  Asp/Glu/hydantoin racemase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20800
symbol: glnQ
gene_biotype: protein_coding
description:
  Similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20805
symbol: glnP
gene_biotype: protein_coding
description:
  Similar to permease component of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20810
symbol: glnH
gene_biotype: protein_coding
description:
  Glutamine ABC transporter substrate-bindnig protein; Similar to periplasmic-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: Z042_20825
symbol: AHG21782.1
gene_biotype: protein_coding
description:
  Adenylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20840
symbol: ompX
gene_biotype: protein_coding
description:
  Membrane protein; OmpX; involved in cell adhesion; forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface; mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20850
symbol: AHG21787.1
gene_biotype: protein_coding
description:
  Transporter; Member of the Gnt family of gluconate transporters; not involved in gluconate transport; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20855
symbol: AHG21788.1
gene_biotype: protein_coding
description:
  Hydroxypyruvate isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the hyi family.


ensembl_gene_id: Z042_20860
symbol: AHG21789.1
gene_biotype: protein_coding
description:
  Aldolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20880
symbol: AHG21793.1
gene_biotype: protein_coding
description:
  CadC family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20900
symbol: AHG21795.1
gene_biotype: protein_coding
description:
  Glutathione S-transferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the GST superfamily.


ensembl_gene_id: Z042_20935
symbol: AHG21801.1
gene_biotype: protein_coding
description:
  Molybdopterin biosynthesis protein MoeA; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: Z042_20940
symbol: AHG21802.1
gene_biotype: protein_coding
description:
  Isoaspartyl peptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20945
symbol: AHG21803.2
gene_biotype: protein_coding
description:
  Glutathione ABC transporter ATP-binding protein; With GsiBCD is involved in glutathione import; GsiA contains 2 ATP-binding domains; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: Z042_20950
symbol: AHG21804.1
gene_biotype: protein_coding
description:
  Glutathione ABC transporter substrate-binding protein; With GsiACD is involved in the transport of glutathione into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20970
symbol: xylB
gene_biotype: protein_coding
description:
  Xylulose kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20975
symbol: AHG21809.1
gene_biotype: protein_coding
description:
  Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20980
symbol: AHG21810.1
gene_biotype: protein_coding
description:
  Sugar isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_20990
symbol: AHG21812.1
gene_biotype: protein_coding
description:
  Glutathione ABC transporter permease; With GsiABD is involved in the transport of glutathione into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21005
symbol: lacZ
gene_biotype: protein_coding
description:
  beta-D-galactosidase; Forms a homotetramer; hydrolyzes lactose disaccharide to galactose and glucose; converts lactose to allolactose which is the natural inducer of the lac operon; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 2 family.


ensembl_gene_id: Z042_21015
symbol: AHG21816.1
gene_biotype: protein_coding
description:
  Catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione; also catalyzes the formation of aldehyde or ketone from alcohols; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.


ensembl_gene_id: Z042_21030
symbol: folE
gene_biotype: protein_coding
description:
  GTP cyclohydrolase; Involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21045
symbol: AHG21822.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter substrate-binding protein; Wtih MglAC is involved in the transport of beta-methylgalactoside; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21055
symbol: mglC
gene_biotype: protein_coding
description:
  Beta-methylgalactoside transporter permease; ABC transporter; functions in galactose transport; part of MglA2C2B transporter complex; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Z042_21060
symbol: AHG21825.1
gene_biotype: protein_coding
description:
  Amidinotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21075
symbol: AHG21828.1
gene_biotype: protein_coding
description:
  Polar amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21085
symbol: AHG21830.1
gene_biotype: protein_coding
description:
  Succinylglutamate desuccinylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21090
symbol: AHG21831.1
gene_biotype: protein_coding
description:
  Vancomycin high temperature exclusion protein; Involved in vancomycin sensitivity and other barrier functions of the cell envelope; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21095
symbol: maeA
gene_biotype: protein_coding
description:
  Malate dehydrogenase; Malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21100
symbol: cdd
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis.


ensembl_gene_id: Z042_21125
symbol: metG
gene_biotype: protein_coding
description:
  methionine--tRNA ligase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: Z042_21130
symbol: AHG21838.1
gene_biotype: protein_coding
description:
  Antiporter; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.


ensembl_gene_id: Z042_21140
symbol: udk
gene_biotype: protein_coding
description:
  Uridine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21150
symbol: AHG21842.1
gene_biotype: protein_coding
description:
  Membrane assembly protein AsmA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21155
symbol: dcuC
gene_biotype: protein_coding
description:
  Responsible for the transport of C4-dicarboxylates during anaerobic growth; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21180
symbol: AHG21846.1
gene_biotype: protein_coding
description:
  Polysaccharide export protein Wza; Required for the translocation of capsular polysaccharide through the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21185
symbol: AHG21847.1
gene_biotype: protein_coding
description:
  Protein tyrosine phosphatase; Wzb shows phosphatase activity towards the autophosphorylated Wzc protein, which induces colanic acid biosynthesis; catalyzes the phosphorylation of UDP-glucose dehydrogenase, an enzyme involved in colanic acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: Z042_21190
symbol: AHG21848.1
gene_biotype: protein_coding
description:
  Tyrosine protein kinase; Wzc; catalyzes the autophosphorylation on tyrosine residues which downregulates the biosynthesis of colonic acid (an extracellular polysaccharide); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21205
symbol: AHG21850.1
gene_biotype: protein_coding
description:
  Serine acetyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21255
symbol: AHG21856.1
gene_biotype: protein_coding
description:
  UDP-galactose-4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the NAD(P)-dependent epimerase/dehydratase family.


ensembl_gene_id: Z042_21305
symbol: AHG21863.1
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.


ensembl_gene_id: Z042_21310
symbol: hisI
gene_biotype: protein_coding
description:
  phosphoribosyl-ATP pyrophosphatase; Catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; In the N-terminal section; belongs to the PRA-CH family.


ensembl_gene_id: Z042_21315
symbol: hisF
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: Z042_21320
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21325
symbol: hisH
gene_biotype: protein_coding
description:
  Imidazole glycerol phosphate synthase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: Z042_21330
symbol: hisB
gene_biotype: protein_coding
description:
  Imidazoleglycerol-phosphate dehydratase; Catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; In the N-terminal section; belongs to the histidinol- phosphatase family.


ensembl_gene_id: Z042_21335
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: Z042_21340
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: Z042_21345
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity.


ensembl_gene_id: Z042_21365
symbol: AHG21875.1
gene_biotype: protein_coding
description:
  Sodium:solute symporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: Z042_21370
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: Z042_21390
symbol: AHG21878.2
gene_biotype: protein_coding
description:
  Magnesium transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21520
symbol: AHG21900.1
gene_biotype: protein_coding
description:
  Chondroitin lyase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21525
symbol: AHG21901.1
gene_biotype: protein_coding
description:
  3-ketoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21545
symbol: AHG21905.1
gene_biotype: protein_coding
description:
  UDP pyrophosphate phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21550
symbol: eco
gene_biotype: protein_coding
description:
  Ecotin; General inhibitor of pancreatic serine proteases: inhibits chymotrypsin, trypsin, elastases, factor X, kallikrein as well as a variety of other proteases.


ensembl_gene_id: Z042_21570
symbol: AHG21910.1
gene_biotype: protein_coding
description:
  Glutaredoxin; Functions as an electron carrier in the glutathione-dependent synthesis of deoxyribonucleotides by the enzyme ribonucleotide reductase; also involved in reducing some disulfides in a coupled system with glutathione reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21580
symbol: rimK
gene_biotype: protein_coding
description:
  Ribosomal protein S6 modification protein; Responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the RimK family.


ensembl_gene_id: Z042_21585
symbol: AHG21913.1
gene_biotype: protein_coding
description:
  Sensory transduction regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21590
symbol: AHG21914.1
gene_biotype: protein_coding
description:
  Spermidine/putrescine ABC transporter substrate-binding protein; Required for the activity of the bacterial periplasmic transport system of putrescine; Belongs to the bacterial solute-binding protein PotD/PotF family.


ensembl_gene_id: Z042_21595
symbol: potG
gene_biotype: protein_coding
description:
  Putrescine transporter ATP-binding subunit; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: Z042_21615
symbol: rumB
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Catalyzes the formation of 5-methyl-uridine at position 747 (m5U747) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmC subfamily.


ensembl_gene_id: Z042_21620
symbol: AHG21919.1
gene_biotype: protein_coding
description:
  Arginine ABC transporter substrate-binding protein; With ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: Z042_21645
symbol: artM
gene_biotype: protein_coding
description:
  Arginine transporter permease subunit ArtM; With ArtPQJI acts to transport arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21650
symbol: AHG21923.1
gene_biotype: protein_coding
description:
  Arginine transporter permease subunit ArtQ; With ArtPMJI transports arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21660
symbol: AHG21925.2
gene_biotype: protein_coding
description:
  Arginine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21665
symbol: AHG21926.1
gene_biotype: protein_coding
description:
  N-acetylmuramoyl-L-alanine amidase amid; Catalyzes the cleavage of the bond between muamic acid and l-alanine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21680
symbol: AHG21929.1
gene_biotype: protein_coding
description:
  Threonine aldolase; Low- specificity; catalyzes the formation of acetaldehyde and glycine from L-threonine; acts on L-threonine, L-allo-threonine, L-threo-phenylserine, and L-erythro-phenylserine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21685
symbol: AHG21930.1
gene_biotype: protein_coding
description:
  HCP oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21715
symbol: AHG21936.1
gene_biotype: protein_coding
description:
  Stationary phase/starvation inducible regulatory protein CspD; Inhibits DNA replication at both initiation and elongation steps; stationary phase and starvation inducible; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21720
symbol: clpS
gene_biotype: protein_coding
description:
  Clp protease ClpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.


ensembl_gene_id: Z042_21725
symbol: clpA
gene_biotype: protein_coding
description:
  Clp protease ClpX; ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease; directs protease to specific substrates; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ClpA/ClpB family.


ensembl_gene_id: Z042_21730
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: Z042_21735
symbol: aat
gene_biotype: protein_coding
description:
  leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.


ensembl_gene_id: Z042_21740
symbol: AHG21941.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter permease; In Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21750
symbol: AHG21943.1
gene_biotype: protein_coding
description:
  Thioredoxin reductase; Catalyzes the transfer of electrons from NADPH to thioredoxin; FAD/NAD(P) binding; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21755
symbol: AHG21944.1
gene_biotype: protein_coding
description:
  Leucine-responsive transcriptional regulator; Mediates a global response to leucine; acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21760
symbol: AHG21945.1
gene_biotype: protein_coding
description:
  Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21765
symbol: lolA
gene_biotype: protein_coding
description:
  Lipoprotein chaperone; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).


ensembl_gene_id: Z042_21770
symbol: AHG21947.1
gene_biotype: protein_coding
description:
  Recombination factor protein RarA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21775
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: Z042_21785
symbol: AHG21950.1
gene_biotype: protein_coding
description:
  Dimethyl sulfoxide reductase; Oxidoreductase, Fe-S subunit; terminal electron transfer protein for the reduction of DMSO; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21790
symbol: AHG21951.1
gene_biotype: protein_coding
description:
  Dimethyl sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21795
symbol: dmsD
gene_biotype: protein_coding
description:
  Twin-argninine leader-binding protein DmsD; Required for biogenesis/assembly of DMSO reductase, but not for the interaction of the DmsA signal peptide with the Tat system. May be part of a chaperone cascade complex that facilitates a folding- maturation pathway for the substrate protein.


ensembl_gene_id: Z042_21810
symbol: pflA
gene_biotype: protein_coding
description:
  Pyruvate formate lyase-activating enzyme 1; Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine; Belongs to the organic radical-activating enzymes family.


ensembl_gene_id: Z042_21820
symbol: AHG21957.1
gene_biotype: protein_coding
description:
  Formate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21830
symbol: ansB
gene_biotype: protein_coding
description:
  L-asparaginase II; Catalyzes the formation of aspartate from asparagine, periplasmic; regulated by cyclic AMP receptor protein (CRP) and also induced by anaerobiosis; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the asparaginase 1 family.


ensembl_gene_id: Z042_21835
symbol: serC
gene_biotype: protein_coding
description:
  3-phosphoserine/phosphohydroxythreonine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. SerC subfamily.


ensembl_gene_id: Z042_21840
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: Z042_21845
symbol: cmk
gene_biotype: protein_coding
description:
  Cytidylate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21850
symbol: rpsA
gene_biotype: protein_coding
description:
  30S ribosomal protein S1; Binds mRNA; thus facilitating recognition of the initiation point. It is needed to translate mRNA with a short Shine-Dalgarno (SD) purine-rich sequence.


ensembl_gene_id: Z042_21855
symbol: ihfB
gene_biotype: protein_coding
description:
  Integration host factor subunit beta; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: Z042_21860
symbol: AHG21964.2
gene_biotype: protein_coding
description:
  Competence protein ComEC; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21870
symbol: AHG21965.2
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 3 family.


ensembl_gene_id: Z042_21875
symbol: AHG21966.2
gene_biotype: protein_coding
description:
  Hemolysin secretion protein D; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: Z042_21880
symbol: AHG21967.1
gene_biotype: protein_coding
description:
  Multidrug RND transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21885
symbol: msbA
gene_biotype: protein_coding
description:
  Lipid transporter ATP-binding/permease; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation.


ensembl_gene_id: Z042_21890
symbol: lpxK
gene_biotype: protein_coding
description:
  Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: Z042_21915
symbol: AHG21974.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0434 family.


ensembl_gene_id: Z042_21920
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate cytidylyltransferase; Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: Z042_21935
symbol: cmoM
gene_biotype: protein_coding
description:
  SAM-dependent methyltransferase; Catalyzes the methylation of 5-carboxymethoxyuridine (cmo5U) to form 5-methoxycarbonylmethoxyuridine (mcmo5U) at position 34 in tRNAs; Belongs to the class I-like SAM-binding methyltransferase superfamily. CmoM family.


ensembl_gene_id: Z042_21940
symbol: mukF
gene_biotype: protein_coding
description:
  Condesin subunit F; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Not required for mini-F plasmid partitioning. Probably acts via its interaction with MukB and MukE. Overexpression results in anucleate cells. It has a calcium binding activity.


ensembl_gene_id: Z042_21945
symbol: mukE
gene_biotype: protein_coding
description:
  Condesin subunit E; Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF.


ensembl_gene_id: Z042_21950
symbol: mukB
gene_biotype: protein_coding
description:
  Cell division protein MukB; Plays a central role in chromosome condensation, segregation and cell cycle progression. Functions as a homodimer, which is essential for chromosome partition. Involved in negative DNA supercoiling in vivo, and by this means organize and compact chromosomes. May achieve or facilitate chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division; Belongs to the SMC family. MukB subfamily.


ensembl_gene_id: Z042_21970
symbol: AHG21985.2
gene_biotype: protein_coding
description:
  Aromatic amino acid aminotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21975
symbol: AHG21986.1
gene_biotype: protein_coding
description:
  Porin; Allows for ions and hydrophilic solutes to cross the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Gram-negative porin family.


ensembl_gene_id: Z042_21980
symbol: asnS
gene_biotype: protein_coding
description:
  asparaginyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_21985
symbol: pncB
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the synthesis of beta-nicotinate D-ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP; Belongs to the NAPRTase family.


ensembl_gene_id: Z042_21995
symbol: ssuB
gene_biotype: protein_coding
description:
  Aliphatic sulfonates transport ATP-binding subunit; Part of the ABC transporter complex SsuABC involved in aliphatic sulfonates import. Responsible for energy coupling to the transport system.


ensembl_gene_id: Z042_22000
symbol: ssuC
gene_biotype: protein_coding
description:
  Alkanesulfonate transporter permease subunit; Part of the ABC type transport system for alkanesulfonate SsuABC; SsuB the ATP-binding subunit and SsuC the permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22005
symbol: ssuD
gene_biotype: protein_coding
description:
  Alkanesulfonate monooxygenase; Catalyzes the desulfonation of aliphatic sulfonates. Belongs to the SsuD family.


ensembl_gene_id: Z042_22015
symbol: AHG21994.1
gene_biotype: protein_coding
description:
  NAD(P)H-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22020
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase; Catalyzes the conversion of dihydroorotate to orotate with quinone as electron acceptor; Belongs to the dihydroorotate dehydrogenase family. Type 2 subfamily.


ensembl_gene_id: Z042_22025
symbol: zapC
gene_biotype: protein_coding
description:
  Cell division protein ZapC; Contributes to the efficiency of the cell division process by stabilizing the polymeric form of the cell division protein FtsZ. Acts by promoting interactions between FtsZ protofilaments and suppressing the GTPase activity of FtsZ.


ensembl_gene_id: Z042_22035
symbol: rlmL
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family.


ensembl_gene_id: Z042_22040
symbol: AHG21999.1
gene_biotype: protein_coding
description:
  ABC transporter ATPase; Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22045
symbol: AHG22000.2
gene_biotype: protein_coding
description:
  Paraquat-inducible protein A; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22050
symbol: AHG22001.1
gene_biotype: protein_coding
description:
  Paraquat-inducible protein B; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22060
symbol: AHG22003.1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: Z042_22075
symbol: AHG22006.1
gene_biotype: protein_coding
description:
  Esterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22140
symbol: dsrB
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the DsrB family.


ensembl_gene_id: Z042_22145
symbol: rcsA
gene_biotype: protein_coding
description:
  Capsule biosynthesis protein CapA; Component of the Rcs signaling system, which controls transcription of numerous genes. Binds to DNA to regulate expression of genes.


ensembl_gene_id: Z042_22150
symbol: AHG22018.1
gene_biotype: protein_coding
description:
  Pyridoxal-dependent decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22170
symbol: AHG22021.1
gene_biotype: protein_coding
description:
  Magnesium ABC transporter ATPase; P-type; involved in magnesium transport into the cytoplasm; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22185
symbol: kynA
gene_biotype: protein_coding
description:
  Tryptophan 2,3-dioxygenase; Heme-dependent dioxygenase that catalyzes the oxidative cleavage of the L-tryptophan (L-Trp) pyrrole ring and converts L- tryptophan to N-formyl-L-kynurenine. Catalyzes the oxidative cleavage of the indole moiety.


ensembl_gene_id: Z042_22190
symbol: AHG22025.1
gene_biotype: protein_coding
description:
  ppGpp-dependent; membrane-associated, stress protein produced under conditions of nutrient deprivation, osmotic shock and oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22195
symbol: AHG22026.1
gene_biotype: protein_coding
description:
  oriC-binding nucleoid-associated protein; YdgT; in E. coli, when complexed with H-NS or StpA binds a 26 base-pair DNA sequence of oriC; seems to play a role in optimizing the activity of oriC; non-essential; Hha protein paralog; in an hha mutant background, cnu is overexpressed and can compensate hha-induced phenotypes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22205
symbol: flhD
gene_biotype: protein_coding
description:
  Transcriptional regulator; Functions in complex with FlhC as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhD family.


ensembl_gene_id: Z042_22210
symbol: flhC
gene_biotype: protein_coding
description:
  Transcriptional regulator; Functions in complex with FlhD as a master transcriptional regulator that regulates transcription of several flagellar and non- flagellar operons by binding to their promoter region. Activates expression of class 2 flagellar genes, including fliA, which is a flagellum-specific sigma factor that turns on the class 3 genes. Also regulates genes whose products function in a variety of physiological pathways; Belongs to the FlhC family.


ensembl_gene_id: Z042_22220
symbol: motB
gene_biotype: protein_coding
description:
  Flagellar motor protein MotB; With MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22225
symbol: AHG22031.2
gene_biotype: protein_coding
description:
  Chemotaxis protein CheA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22230
symbol: AHG22032.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheW; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22235
symbol: AHG22033.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheR; Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP.


ensembl_gene_id: Z042_22240
symbol: cheB
gene_biotype: protein_coding
description:
  Chemotaxis protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: Z042_22245
symbol: AHG22035.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheY; Chemotaxis regulator that, when phosphorylated, interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22250
symbol: AHG22036.1
gene_biotype: protein_coding
description:
  Chemotaxis protein CheZ; Plays an important role in bacterial chemotaxis signal transduction pathway by accelerating the dephosphorylation of phosphorylated CheY (CheY-P).


ensembl_gene_id: Z042_22255
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: Z042_22260
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: Z042_22265
symbol: AHG22039.1
gene_biotype: protein_coding
description:
  Flagellar protein flhE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22270
symbol: AHG22040.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgN; Export chaperone for FlgK and FlgL; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22275
symbol: AHG22041.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis anti-sigma factor FlgM; Regulates the flagellar specific sigma28 transcription factor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22280
symbol: AHG22042.1
gene_biotype: protein_coding
description:
  Flagellar basal body P-ring biosynthesis protein FlgA; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.


ensembl_gene_id: Z042_22285
symbol: AHG22043.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: Z042_22290
symbol: flgC
gene_biotype: protein_coding
description:
  With FlgF and B makes up the proximal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22300
symbol: flgE-2
gene_biotype: protein_coding
description:
  The hook connects flagellar basal body to the flagellar filament; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22305
symbol: flgF
gene_biotype: protein_coding
description:
  Flagellar basal body rod protein FlgF; FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22310
symbol: flgG-2
gene_biotype: protein_coding
description:
  Makes up the distal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22315
symbol: flgH-2
gene_biotype: protein_coding
description:
  Flagellar L-ring protein FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: Z042_22320
symbol: flgI
gene_biotype: protein_coding
description:
  Flagellar basal body P-ring biosynthesis protein FlgA; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: Z042_22325
symbol: flgJ
gene_biotype: protein_coding
description:
  Flagellar rod assembly protein FlgJ; Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22330
symbol: flgK
gene_biotype: protein_coding
description:
  With FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22335
symbol: flgL
gene_biotype: protein_coding
description:
  With FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22340
symbol: fliR
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: Z042_22355
symbol: AHG22057.1
gene_biotype: protein_coding
description:
  Flagellar assembly protein FliO; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22360
symbol: fliN
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliN; FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation. Belongs to the FliN/MopA/SpaO family.


ensembl_gene_id: Z042_22365
symbol: fliM
gene_biotype: protein_coding
description:
  Flagellar motor switch protein FliM; FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.


ensembl_gene_id: Z042_22370
symbol: fliL
gene_biotype: protein_coding
description:
  Flagellar basal body-associated protein FliL; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: Z042_22380
symbol: fliJ
gene_biotype: protein_coding
description:
  Flagellar biosynthesis chaperone; Flagellar protein that affects chemotactic events. Belongs to the FliJ family.


ensembl_gene_id: Z042_22395
symbol: fliG-2
gene_biotype: protein_coding
description:
  Flagellar motor switch protein G; FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation.


ensembl_gene_id: Z042_22400
symbol: AHG22066.1
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: Z042_22415
symbol: AHG22068.2
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliT; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22420
symbol: fliS
gene_biotype: protein_coding
description:
  Flagellar protein FliS; Flagellin specific chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22425
symbol: AHG22070.1
gene_biotype: protein_coding
description:
  Flagellar hook protein FliD; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: Z042_22440
symbol: fliA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis sigma factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor controls the expression of flagella-related genes; Belongs to the sigma-70 factor family. FliA subfamily.


ensembl_gene_id: Z042_22445
symbol: AHG22073.1
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FliZ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22450
symbol: dcyD
gene_biotype: protein_coding
description:
  Cysteine desulfhydrase; Catalyzes the alpha,beta-elimination reaction of D-cysteine and of several D-cysteine derivatives. It could be a defense mechanism against D-cysteine; Belongs to the ACC deaminase/D-cysteine desulfhydrase family.


ensembl_gene_id: Z042_22455
symbol: AHG22075.1
gene_biotype: protein_coding
description:
  Cystine transporter subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: Z042_22465
symbol: AHG22077.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22505
symbol: putA
gene_biotype: protein_coding
description:
  Transcriptional regulator; Oxidizes proline to glutamate for use as a carbon and nitrogen source; Belongs to the aldehyde dehydrogenase family.  In the N-terminal section; belongs to the proline dehydrogenase family.


ensembl_gene_id: Z042_22510
symbol: AHG22085.1
gene_biotype: protein_coding
description:
  Proline:sodium symporter PutP; Catalyzes the sodium-dependent uptake of extracellular L- proline; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.


ensembl_gene_id: Z042_22515
symbol: AHG22086.1
gene_biotype: protein_coding
description:
  Iron permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22520
symbol: AHG22087.1
gene_biotype: protein_coding
description:
  Ferrous iron transporter; With EfeUB forms an iron transport system which is silent in E. coli K-12 due to a mutation in EfeU; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22525
symbol: AHG22088.2
gene_biotype: protein_coding
description:
  Peroxidase; Involved in the recovery of exogenous heme iron. Extracts iron from heme while preserving the tetrapyrrol ring intact. Belongs to the DyP-type peroxidase family.


ensembl_gene_id: Z042_22545
symbol: AHG22092.1
gene_biotype: protein_coding
description:
  Calcium/sodium:proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22550
symbol: AHG22093.2
gene_biotype: protein_coding
description:
  FAD-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22555
symbol: AHG22094.1
gene_biotype: protein_coding
description:
  Transporter; Catalyzes the cleavage of glutathione into 5-oxo-L-proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides; Belongs to the gamma-glutamylcyclotransferase family.


ensembl_gene_id: Z042_22560
symbol: cbl
gene_biotype: protein_coding
description:
  LysR-type transcriptional regulator similar to CysB; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates two operons consisting of ABC transporters that are part of the cys regulon; regulated by CysB; DNA-binding transcriptional activator for the ssuEADCB and tauABCD operons; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22575
symbol: AHG22097.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 4-epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22585
symbol: AHG22099.1
gene_biotype: protein_coding
description:
  Polysaccharide biosynthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22590
symbol: AHG22100.1
gene_biotype: protein_coding
description:
  Glycosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22615
symbol: AHG22104.1
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22625
symbol: AHG22106.1
gene_biotype: protein_coding
description:
  Metallo-beta-lactamase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22640
symbol: AHG22109.1
gene_biotype: protein_coding
description:
  Fatty acid hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22645
symbol: AHG22110.1
gene_biotype: protein_coding
description:
  linoleoyl-CoA desaturase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22670
symbol: astA
gene_biotype: protein_coding
description:
  Arginine succinyltransferase; Catalyzes the transfer of succinyl-CoA to arginine to produce N(2)-succinylarginine.


ensembl_gene_id: Z042_22675
symbol: astD
gene_biotype: protein_coding
description:
  Succinylglutamate-semialdehyde dehydrogenase; Catalyzes the NAD-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.


ensembl_gene_id: Z042_22680
symbol: astB
gene_biotype: protein_coding
description:
  N-succinylarginine dihydrolase; Catalyzes the hydrolysis of N(2)-succinylarginine into N(2)- succinylornithine, ammonia and CO(2).


ensembl_gene_id: Z042_22685
symbol: astE
gene_biotype: protein_coding
description:
  Succinylglutamate desuccinylase; Transforms N(2)-succinylglutamate into succinate and glutamate; Belongs to the AspA/AstE family. Succinylglutamate desuccinylase subfamily.


ensembl_gene_id: Z042_22725
symbol: AHG22125.1
gene_biotype: protein_coding
description:
  Glutathione transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22750
symbol: AHG22129.1
gene_biotype: protein_coding
description:
  Polyphenol oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22755
symbol: AHG22130.1
gene_biotype: protein_coding
description:
  23S rRNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22760
symbol: mntP
gene_biotype: protein_coding
description:
  Hypothetical protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.


ensembl_gene_id: Z042_22770
symbol: AHG22133.1
gene_biotype: protein_coding
description:
  PTS mannose transporter subunit IID; Hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IID with IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22775
symbol: AHG22134.1
gene_biotype: protein_coding
description:
  PTS mannose transporter subunit IIC; Catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22780
symbol: AHG22135.1
gene_biotype: protein_coding
description:
  PTS mannose transporter subunit IIAB; Catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; subunit IIA transfers a phosphoryl group to subunit IIB; subunit IIB transfers the phosphoryl group to the substrate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22790
symbol: AHG22137.1
gene_biotype: protein_coding
description:
  c-di-GMP phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22795
symbol: AHG22138.1
gene_biotype: protein_coding
description:
  Serine dehydratase; Catalyzes the formation of pyruvate from serine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the iron-sulfur dependent L-serine dehydratase family.


ensembl_gene_id: Z042_22800
symbol: AHG22139.1
gene_biotype: protein_coding
description:
  NUDIX hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family. PCD1 subfamily.


ensembl_gene_id: Z042_22805
symbol: pabB
gene_biotype: protein_coding
description:
  Para-aminobenzoate synthase component 1; catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and L-glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22815
symbol: AHG22142.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0181 family.


ensembl_gene_id: Z042_22820
symbol: purT
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase; Involved in the de novo purine biosynthesis. Catalyzes the transfer of formate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR). Formate is provided by PurU via hydrolysis of 10-formyl-tetrahydrofolate; Belongs to the PurK/PurT family.


ensembl_gene_id: Z042_22840
symbol: dbpA
gene_biotype: protein_coding
description:
  ATP-dependent RNA helicase DbpA; DEAD-box RNA helicase involved in the assembly of the 50S ribosomal subunit. Has an RNA-dependent ATPase activity, which is specific for 23S rRNA, and a 3' to 5' RNA helicase activity that uses the energy of ATP hydrolysis to destabilize and unwind short rRNA duplexes.


ensembl_gene_id: Z042_22850
symbol: AHG22148.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0267 family.


ensembl_gene_id: Z042_22860
symbol: AHG22149.1
gene_biotype: protein_coding
description:
  Proline iminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S33 family.


ensembl_gene_id: Z042_22865
symbol: AHG22150.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit theta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22885
symbol: AHG22153.1
gene_biotype: protein_coding
description:
  Copper resistance protein CopD; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22900
symbol: AHG22156.1
gene_biotype: protein_coding
description:
  Excisionase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22915
symbol: AHG22159.2
gene_biotype: protein_coding
description:
  DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22925
symbol: AHG22160.1
gene_biotype: protein_coding
description:
  Phage-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_22960
symbol: AHG22163.1
gene_biotype: protein_coding
description:
  Phage-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23015
symbol: AHG22168.1
gene_biotype: protein_coding
description:
  Restriction endonuclease subunit M; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the methyltransferase superfamily.


ensembl_gene_id: Z042_23090
symbol: AHG22174.1
gene_biotype: protein_coding
description:
  DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the N(4)/N(6)-methyltransferase family.


ensembl_gene_id: Z042_23135
symbol: AHG22182.1
gene_biotype: protein_coding
description:
  Glycoside hydrolase family 24; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23150
symbol: AHG22185.1
gene_biotype: protein_coding
description:
  Small subunit bacteriophage terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23155
symbol: AHG22186.1
gene_biotype: protein_coding
description:
  Terminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23160
symbol: AHG22187.1
gene_biotype: protein_coding
description:
  Portal protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23175
symbol: AHG22189.1
gene_biotype: protein_coding
description:
  Virion structural protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23235
symbol: AHG22198.1
gene_biotype: protein_coding
description:
  Bacteriocin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23360
symbol: lpxL
gene_biotype: protein_coding
description:
  Lipid A biosynthesis lauroyl acyltransferase; Catalyzes the transfer of laurate from lauroyl-acyl carrier protein (ACP) to Kdo(2)-lipid IV(A) to form Kdo(2)-(lauroyl)-lipid IV(A).


ensembl_gene_id: Z042_23365
symbol: AHG22216.1
gene_biotype: protein_coding
description:
  Sulfurtransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0176 family.


ensembl_gene_id: Z042_23375
symbol: AHG22218.1
gene_biotype: protein_coding
description:
  Cytochrome B561; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23380
symbol: tqsA
gene_biotype: protein_coding
description:
  Pheromone autoinducer 2 transporter; Transport of quorum-sensing signal; mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23390
symbol: solA
gene_biotype: protein_coding
description:
  N-methyltryptophan oxidase; Catalyzes the oxidative demethylation of N-methyl-L- tryptophan; Belongs to the MSOX/MTOX family. MTOX subfamily.


ensembl_gene_id: Z042_23395
symbol: bssS
gene_biotype: protein_coding
description:
  Biofilm formation regulatory protein BssS; BssS; regulator of biofilm through signal secretion; disruption of this gene in Escherichia coli led to effects on biofilm formation, alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23405
symbol: AHG22224.1
gene_biotype: protein_coding
description:
  Damage-inducible protein I; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23415
symbol: rne
gene_biotype: protein_coding
description:
  Ribonuclease E; Endoribonuclease that plays a central role in RNA processing and decay. Required for the maturation of 5S and 16S rRNAs and the majority of tRNAs. Also involved in the degradation of most mRNAs. Belongs to the RNase E/G family. RNase E subfamily.


ensembl_gene_id: Z042_23425
symbol: AHG22228.1
gene_biotype: protein_coding
description:
  Septum formation inhibitor Maf; Nucleoside triphosphate pyrophosphatase. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: Z042_23435
symbol: rpmF
gene_biotype: protein_coding
description:
  Some L32 proteins have zinc finger motifs consisting of CXXC while others do not; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL32 family.


ensembl_gene_id: Z042_23440
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: Z042_23445
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-ACP synthase; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: Z042_23450
symbol: AHG22233.1
gene_biotype: protein_coding
description:
  Malonyl CoA-ACP transacylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23455
symbol: fabG
gene_biotype: protein_coding
description:
  3-ketoacyl-ACP reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Z042_23470
symbol: AHG22237.1
gene_biotype: protein_coding
description:
  4-amino-4-deoxychorismate lyase; Catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23475
symbol: mltG
gene_biotype: protein_coding
description:
  Aminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: Z042_23480
symbol: tmk
gene_biotype: protein_coding
description:
  Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: Z042_23485
symbol: AHG22240.1
gene_biotype: protein_coding
description:
  DNA polymerase III subunit delta; Catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23495
symbol: AHG22242.1
gene_biotype: protein_coding
description:
  PTS glucose-specific subunit IIBC; Phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23505
symbol: AHG22244.1
gene_biotype: protein_coding
description:
  Purine nucleoside phosphoramidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23515
symbol: lpoB
gene_biotype: protein_coding
description:
  Penicillin-binding protein; Regulator of peptidoglycan synthesis that is essential for the function of penicillin-binding protein 1B (PBP1b). Belongs to the LpoB family.


ensembl_gene_id: Z042_23525
symbol: nagZ
gene_biotype: protein_coding
description:
  Beta-hexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.


ensembl_gene_id: Z042_23530
symbol: AHG22249.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0227 family.


ensembl_gene_id: Z042_23535
symbol: AHG22250.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23545
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: Z042_23555
symbol: AHG22253.1
gene_biotype: protein_coding
description:
  Outer membrane-specific lipoprotein transporter subunit LolC; Part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23560
symbol: lolD
gene_biotype: protein_coding
description:
  Lipoprotein ABC transporter ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.


ensembl_gene_id: Z042_23565
symbol: AHG22255.1
gene_biotype: protein_coding
description:
  Outer membrane-specific lipoprotein transporter subunit LolE; Part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23570
symbol: nagK
gene_biotype: protein_coding
description:
  N-acetylglucosamine kinase; Catalyzes the phosphorylation of N-acetyl-D-glucosamine (GlcNAc) derived from cell-wall degradation, yielding GlcNAc-6-P.


ensembl_gene_id: Z042_23575
symbol: cobB
gene_biotype: protein_coding
description:
  NAD-dependent deacetylase; Modulates the activities of several enzymes which are inactive in their acetylated form; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the sirtuin family. Class III subfamily.


ensembl_gene_id: Z042_23590
symbol: AHG22259.1
gene_biotype: protein_coding
description:
  50S ribosomal protein L16 arginine hydroxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23600
symbol: AHG22260.1
gene_biotype: protein_coding
description:
  Response regulator in two-component regulatory system with PhoQ; involved in magnesium starvation and stress; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23610
symbol: AHG22262.1
gene_biotype: protein_coding
description:
  Adenylosuccinate lyase; Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.


ensembl_gene_id: Z042_23615
symbol: hflD
gene_biotype: protein_coding
description:
  Lysogenization regulator; HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23620
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA 2-thiouridylase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA(Lys), tRNA(Glu) and tRNA(Gln), leading to the formation of s(2)U34, the first step of tRNA-mnm(5)s(2)U34 synthesis. Sulfur is provided by IscS, via a sulfur-relay system. Binds ATP and its substrate tRNAs; Belongs to the MnmA/TRMU family.


ensembl_gene_id: Z042_23625
symbol: nudJ
gene_biotype: protein_coding
description:
  Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family. NudJ subfamily.


ensembl_gene_id: Z042_23630
symbol: AHG22266.1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridylate synthase; Catalyzes the formation of pseudouridine from uracil-2457 in 23S ribosomal RNA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the pseudouridine synthase RsuA family.


ensembl_gene_id: Z042_23640
symbol: AHG22267.1
gene_biotype: protein_coding
description:
  Converts isocitrate to alpha ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23795
symbol: AHG22285.1
gene_biotype: protein_coding
description:
  Gamma-glutamyl-gamma-aminobutyrate hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23810
symbol: AHG22288.1
gene_biotype: protein_coding
description:
  Aromatic amino acid exporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23825
symbol: AHG22291.1
gene_biotype: protein_coding
description:
  N-formylglutamate amidohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23830
symbol: hutI
gene_biotype: protein_coding
description:
  Imidazolonepropionase; Catalyzing the hydrolysis of 4-imidazolone-5-propionate to N-formimidoyl-L-glutamate, the third step in the histidine degradation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23840
symbol: AHG22294.1
gene_biotype: protein_coding
description:
  Catalyzes the deimination of N-formimino-L-glutamate to ammonia and N-formyl-L-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23845
symbol: AHG22295.1
gene_biotype: protein_coding
description:
  HutD family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23850
symbol: AHG22296.1
gene_biotype: protein_coding
description:
  Sucrose operon repressor; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23855
symbol: AHG22297.1
gene_biotype: protein_coding
description:
  Glycosyl hydrolase family 32; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.


ensembl_gene_id: Z042_23860
symbol: AHG22298.1
gene_biotype: protein_coding
description:
  Galactoside permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23885
symbol: AHG22301.1
gene_biotype: protein_coding
description:
  RNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23905
symbol: AHG22304.1
gene_biotype: protein_coding
description:
  Free methionine-R-sulfoxide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23910
symbol: proQ
gene_biotype: protein_coding
description:
  Prop expression regulator; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities. May regulate ProP activity through an RNA-based, post-transcriptional mechanism. Belongs to the ProQ family.


ensembl_gene_id: Z042_23915
symbol: AHG22306.1
gene_biotype: protein_coding
description:
  Carboxy-terminal protease; Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family.


ensembl_gene_id: Z042_23925
symbol: htpX
gene_biotype: protein_coding
description:
  Heat shock protein HtpX; Metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase M48B family.


ensembl_gene_id: Z042_23930
symbol: AHG22309.1
gene_biotype: protein_coding
description:
  Multidrug MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23935
symbol: AHG22310.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates the genes involved in 2-keto-3-deoxy gluconate transport and catabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23940
symbol: AHG22311.1
gene_biotype: protein_coding
description:
  L-cystine transporter tcyP; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: Z042_23955
symbol: kduI
gene_biotype: protein_coding
description:
  5-keto-4-deoxyuronate isomerase; Catalyzes the isomerization of 5-dehydro-4-deoxy-D- glucuronate to 3-deoxy-D-glycero-2,5-hexodiulosonate. Belongs to the KduI family.


ensembl_gene_id: Z042_23960
symbol: AHG22315.1
gene_biotype: protein_coding
description:
  2-deoxyglucose-6-phosphatase; YniC; catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate, mannose 6-phosphate and p-nitrophenyl phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23970
symbol: AHG22317.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the fructosamine kinase family.


ensembl_gene_id: Z042_23985
symbol: AHG22319.1
gene_biotype: protein_coding
description:
  Iron ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_23990
symbol: AHG22320.1
gene_biotype: protein_coding
description:
  Iron-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: Z042_24000
symbol: AHG22322.1
gene_biotype: protein_coding
description:
  Histidinol phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24010
symbol: AHG22324.1
gene_biotype: protein_coding
description:
  Multidrug transporter MATE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24020
symbol: thrS
gene_biotype: protein_coding
description:
  threonine--tRNA ligase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: Z042_24025
symbol: AHG22327.1
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the IF-3 family.


ensembl_gene_id: Z042_24030
symbol: rpmI
gene_biotype: protein_coding
description:
  50S ribosomal protein L35; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial ribosomal protein bL35 family.


ensembl_gene_id: Z042_24035
symbol: rplT
gene_biotype: protein_coding
description:
  50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: Z042_24040
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: Z042_24045
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanine--tRNA ligase; Catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: Z042_24050
symbol: ihfA
gene_biotype: protein_coding
description:
  Integration host factor subunit alpha; This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control. Belongs to the bacterial histone-like protein family.


ensembl_gene_id: Z042_24060
symbol: AHG22334.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0260 family.


ensembl_gene_id: Z042_24065
symbol: AHG22335.1
gene_biotype: protein_coding
description:
  3-deoxy-D-manno-oct-2-ulosonic acid (Kdo) hydroxylase family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24075
symbol: dsbB
gene_biotype: protein_coding
description:
  Hypothetical protein; Required for disulfide bond formation in some periplasmic proteins. Acts by oxidizing the DsbA protein; Belongs to the DsbB family.


ensembl_gene_id: Z042_24080
symbol: nhaB
gene_biotype: protein_coding
description:
  Hypothetical protein; Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons; Belongs to the NhaB Na(+)/H(+) (TC 2.A.34) antiporter family.


ensembl_gene_id: Z042_24090
symbol: AHG22339.1
gene_biotype: protein_coding
description:
  SpoVR family protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24110
symbol: btuC
gene_biotype: protein_coding
description:
  Vtamin B12-transporter permease; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Involved in the translocation of the substrate across the membrane.


ensembl_gene_id: Z042_24115
symbol: btuE
gene_biotype: protein_coding
description:
  Glutathione peroxidase; Non-specific peroxidase that can use thioredoxin or glutathione as a reducing agent.


ensembl_gene_id: Z042_24120
symbol: btuD
gene_biotype: protein_coding
description:
  Vitamin B12 ABC transporter ATPase; Part of the ABC transporter complex BtuCDF involved in vitamin B12 import. Responsible for energy coupling to the transport system.


ensembl_gene_id: Z042_24125
symbol: arnB
gene_biotype: protein_coding
description:
  UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase; Catalyzes the conversion of UDP-4-keto-arabinose (UDP-Ara4O) to UDP-4-amino-4-deoxy-L-arabinose (UDP-L-Ara4N). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; Belongs to the DegT/DnrJ/EryC1 family. ArnB subfamily.


ensembl_gene_id: Z042_24140
symbol: arnD
gene_biotype: protein_coding
description:
  4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase; Catalyzes the deformylation of 4-deoxy-4-formamido-L- arabinose-phosphoundecaprenol to 4-amino-4-deoxy-L-arabinose- phosphoundecaprenol. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; Belongs to the polysaccharide deacetylase family. ArnD deformylase subfamily.


ensembl_gene_id: Z042_24145
symbol: arnT
gene_biotype: protein_coding
description:
  4-amino-4-deoxy-L-arabinose transferase; Catalyzes the transfer of the L-Ara4N moiety of the glycolipid undecaprenyl phosphate-alpha-L-Ara4N to lipid A. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides. Belongs to the glycosyltransferase 83 family.


ensembl_gene_id: Z042_24150
symbol: arnE
gene_biotype: protein_coding
description:
  4-amino-4-deoxy-L-arabinose-phospho-UDP flippase; Translocates 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane; Belongs to the ArnE family.


ensembl_gene_id: Z042_24155
symbol: arnF
gene_biotype: protein_coding
description:
  4-amino-4-deoxy-L-arabinose-phospho-UDP flippase; Translocates 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol (alpha-L-Ara4N-phosphoundecaprenol) from the cytoplasmic to the periplasmic side of the inner membrane; Belongs to the ArnF family.


ensembl_gene_id: Z042_24160
symbol: AHG22351.1
gene_biotype: protein_coding
description:
  Endopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24165
symbol: lplA
gene_biotype: protein_coding
description:
  Lipoate--protein ligase; Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl onto the lipoyl domains of lipoate-dependent enzymes. Belongs to the LplA family.


ensembl_gene_id: Z042_24170
symbol: AHG22353.1
gene_biotype: protein_coding
description:
  Diguanylate phosphodiesterase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24175
symbol: selO
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.


ensembl_gene_id: Z042_24180
symbol: AHG22355.1
gene_biotype: protein_coding
description:
  Glutathione peroxidase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutathione peroxidase family.


ensembl_gene_id: Z042_24195
symbol: AHG22357.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate synthase regulatory protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the phosphoenolpyruvate synthase (PEPS) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: Z042_24200
symbol: AHG22358.1
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family.


ensembl_gene_id: Z042_24215
symbol: menI
gene_biotype: protein_coding
description:
  Thioesterase; Catalyzes the hydrolysis of 1,4-dihydroxy-2-naphthoyl-CoA (DHNA-CoA) to 1,4-dihydroxy-2-naphthoate (DHNA).


ensembl_gene_id: Z042_24220
symbol: sufA
gene_biotype: protein_coding
description:
  Functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]; [4Fe-4S]) are assembled; forms a homodimer; similar to IscA protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HesB/IscA family.


ensembl_gene_id: Z042_24225
symbol: AHG22362.1
gene_biotype: protein_coding
description:
  With SufCD activates cysteine desulfurase SufS; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24230
symbol: sufC
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Part of SUF system involved in inserting iron-sulfur clusters into proteins; in Escherichia coli this protein forms a complex with SufBD; the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24235
symbol: AHG22364.1
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24240
symbol: sufS
gene_biotype: protein_coding
description:
  Cysteine sulfinate desulfinase; Cysteine desulfurases mobilize the sulfur from L-cysteine to yield L-alanine, an essential step in sulfur metabolism for biosynthesis of a variety of sulfur-containing biomolecules. Component of the suf operon, which is activated and required under specific conditions such as oxidative stress and iron limitation. Acts as a potent selenocysteine lyase in vitro, that mobilizes selenium from L- selenocysteine. Selenocysteine lyase activity is however unsure in vivo.


ensembl_gene_id: Z042_24245
symbol: sufE
gene_biotype: protein_coding
description:
  Cysteine desufuration protein SufE; Participates in cysteine desulfuration mediated by SufS. Cysteine desulfuration mobilizes sulfur from L-cysteine to yield L- alanine and constitutes an essential step in sulfur metabolism for biosynthesis of a variety of sulfur-containing biomolecules. Functions as a sulfur acceptor for SufS, by mediating the direct transfer of the sulfur atom from the S-sulfanylcysteine of SufS, an intermediate product of cysteine desulfuration process; Belongs to the SufE family.


ensembl_gene_id: Z042_24255
symbol: AHG22368.1
gene_biotype: protein_coding
description:
  Major outer membrane lipoprotein; interacts with peptidoglycan to maintain the integrity of the cell envelope; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24280
symbol: mdtK
gene_biotype: protein_coding
description:
  Multidrug transporter; Multidrug efflux pump that functions probably as a Na(+)/drug antiporter; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. MdtK subfamily.


ensembl_gene_id: Z042_24285
symbol: AHG22372.1
gene_biotype: protein_coding
description:
  Riboflavin synthase subunit alpha; Catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24290
symbol: AHG22373.1
gene_biotype: protein_coding
description:
  Cyclopropane fatty acyl phospholipid synthase; Catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24295
symbol: AHG22374.1
gene_biotype: protein_coding
description:
  Transporter; Uncharacterized member of the major facilitator superfamily (MFS); Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24305
symbol: purR
gene_biotype: protein_coding
description:
  Transcriptional regulator; Is the main repressor of the genes involved in the de novo synthesis of purine nucleotides, regulating purB, purC, purEK, purF, purHD, purL, purMN and guaBA expression. PurR is allosterically activated to bind its cognate DNA by binding the purine corepressors, hypoxanthine or guanine, thereby effecting transcription repression.


ensembl_gene_id: Z042_24325
symbol: AHG22380.1
gene_biotype: protein_coding
description:
  Glutaredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glutaredoxin family. Monothiol subfamily.


ensembl_gene_id: Z042_24330
symbol: rnt
gene_biotype: protein_coding
description:
  Ribonuclease T; Trims short 3' overhangs of a variety of RNA species, leaving a one or two nucleotide 3' overhang. Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A). Also appears to be involved in tRNA biosynthesis.


ensembl_gene_id: Z042_24335
symbol: AHG22382.1
gene_biotype: protein_coding
description:
  Ni-dependent; catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24340
symbol: AHG22383.1
gene_biotype: protein_coding
description:
  N-ethylmaleimide reductase; FMN-linked; catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24345
symbol: AHG22384.1
gene_biotype: protein_coding
description:
  Transcriptional repressor NemR; Represses nemA which is involved in degradation of N-ethylmaleimide; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24355
symbol: AHG22386.1
gene_biotype: protein_coding
description:
  3-beta hydroxysteroid dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24375
symbol: AHG22389.1
gene_biotype: protein_coding
description:
  Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.


ensembl_gene_id: Z042_24395
symbol: slyA
gene_biotype: protein_coding
description:
  Transcriptional regulator SlyA; Transcription regulator that can specifically activate or repress expression of target genes; Belongs to the SlyA family.


ensembl_gene_id: Z042_24405
symbol: anmK
gene_biotype: protein_coding
description:
  anhydro-N-acetylmuramic acid kinase; Catalyzes the specific phosphorylation of 1,6-anhydro-N- acetylmuramic acid (anhMurNAc) with the simultaneous cleavage of the 1,6-anhydro ring, generating MurNAc-6-P. Is required for the utilization of anhMurNAc either imported from the medium or derived from its own cell wall murein, and thus plays a role in cell wall recycling; Belongs to the anhydro-N-acetylmuramic acid kinase family.


ensembl_gene_id: Z042_24415
symbol: pdxH
gene_biotype: protein_coding
description:
  Pyridoxamine 5'-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5'-phosphate (PNP) or pyridoxamine 5'-phosphate (PMP) into pyridoxal 5'-phosphate (PLP).


ensembl_gene_id: Z042_24420
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: Z042_24425
symbol: pdxY
gene_biotype: protein_coding
description:
  Pyridoxamine kinase; Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP.


ensembl_gene_id: Z042_24440
symbol: AHG22402.1
gene_biotype: protein_coding
description:
  Phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24455
symbol: nth
gene_biotype: protein_coding
description:
  Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: Z042_24460
symbol: rnfE
gene_biotype: protein_coding
description:
  Elongation factor G; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: Z042_24465
symbol: rnfG
gene_biotype: protein_coding
description:
  Electron transporter RnfG; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the RnfG family.


ensembl_gene_id: Z042_24470
symbol: rnfD
gene_biotype: protein_coding
description:
  Electron transporter RnfD; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the NqrB/RnfD family.


ensembl_gene_id: Z042_24485
symbol: rnfB
gene_biotype: protein_coding
description:
  Electron transporter RnfB; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane. Belongs to the 4Fe4S bacterial-type ferredoxin family. RnfB subfamily.


ensembl_gene_id: Z042_24490
symbol: rnfA
gene_biotype: protein_coding
description:
  Electron transporter RsxA; Part of a membrane-bound complex that couples electron transfer with translocation of ions across the membrane.


ensembl_gene_id: Z042_24500
symbol: AHG22414.1
gene_biotype: protein_coding
description:
  aryl-phospho-beta-D-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24510
symbol: araB
gene_biotype: protein_coding
description:
  Ribulokinase; Catalyzes the phosphorylation of ribulose to ribulose 5-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24515
symbol: AHG22417.1
gene_biotype: protein_coding
description:
  Sugar ABC transporter substrate-binding protein; With AraGH is involved in the transport of arabinose into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24520
symbol: araG
gene_biotype: protein_coding
description:
  L-arabinose transporter ATP-binding protein; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family.


ensembl_gene_id: Z042_24525
symbol: araH
gene_biotype: protein_coding
description:
  L-arabinose transporter permease; Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: Z042_24530
symbol: AHG22420.1
gene_biotype: protein_coding
description:
  Positive and negative regulator; regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24570
symbol: add
gene_biotype: protein_coding
description:
  Adenosine deaminase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the metallo-dependent hydrolases superfamily. Adenosine and AMP deaminases family. Adenosine deaminase subfamily.


ensembl_gene_id: Z042_24575
symbol: AHG22429.1
gene_biotype: protein_coding
description:
  Bifunctional beta-cystathionase/maltose regulon regulatory protein; Catalyzes the formation of homocysteine and pyruvate from cystathionine; also acts a a negative regulator for the mal regulon but interacting with the transcriptional activator MalT; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24580
symbol: AHG22430.1
gene_biotype: protein_coding
description:
  Bifunctional PTS system maltose and glucose-specific transporter subunits IICB; Phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS); catalyzes the phosphorylation of maltose and glucose concomitant with their translocation across the cell membrane; component IIB catalyzes the phosphorylation of the sugar molecule; IIC forms the translocation channel and contains the substrate specific binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24585
symbol: AHG22431.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Regulates malXY which are involved in maltose-glucose transport; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24605
symbol: AHG22435.1
gene_biotype: protein_coding
description:
  Mannose-6-phosphate isomerase; Catalyzes the formation of of fructose 6-phosphate from mannose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the mannose-6-phosphate isomerase type 1 family.


ensembl_gene_id: Z042_24610
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarate hydratase; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: Z042_24620
symbol: AHG22437.1
gene_biotype: protein_coding
description:
  Colicin V secretion protein CvaA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24650
symbol: tus
gene_biotype: protein_coding
description:
  DNA replication terminus site-binding protein; Trans-acting protein required for termination of DNA replication. Binds to DNA replication terminator sequences (terA to terF) to prevent the passage of replication forks. The termination efficiency will be affected by the affinity of this protein for the terminator sequence; Belongs to the Tus family.


ensembl_gene_id: Z042_24665
symbol: AHG22444.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Mlc, controls the expression of genes involved in the phosphotransferase and phosphoenolpyruvate systems, regulates genes involved in the uptake of sugars; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24675
symbol: AHG22446.2
gene_biotype: protein_coding
description:
  Iron-regulated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24685
symbol: AHG22448.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0482 family.


ensembl_gene_id: Z042_24690
symbol: AHG22449.1
gene_biotype: protein_coding
description:
  Malonic semialdehyde reductase; NADP(+)-dependent; catalyzes the formation of 3-hydroxypropionate from the toxic malonic semialdehyde, catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine; can also use 3-hydroxybutyrate, 3-hydroxy-isobutyrate, D-threonine, L-allo-threonine,D-serine; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: Z042_24700
symbol: dsdA
gene_biotype: protein_coding
description:
  D-serine dehydratase; Catalyzes the formation of pyruvate from serine; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24715
symbol: AHG22453.1
gene_biotype: protein_coding
description:
  Virulence factor SrfB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24745
symbol: arcA
gene_biotype: protein_coding
description:
  Arginine deiminase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24750
symbol: AHG22458.1
gene_biotype: protein_coding
description:
  Amino acid APC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24790
symbol: AHG22464.1
gene_biotype: protein_coding
description:
  Choline transporter; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the BCCT transporter (TC 2.A.15) family.


ensembl_gene_id: Z042_24800
symbol: betB
gene_biotype: protein_coding
description:
  Betaine-aldehyde dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the reversible oxidation of betaine aldehyde to the corresponding acid.


ensembl_gene_id: Z042_24805
symbol: betA
gene_biotype: protein_coding
description:
  Choline dehydrogenase; Involved in the biosynthesis of the osmoprotectant glycine betaine. Catalyzes the oxidation of choline to betaine aldehyde and betaine aldehyde to glycine betaine at the same rate.


ensembl_gene_id: Z042_24845
symbol: AHG22474.1
gene_biotype: protein_coding
description:
  Malonate decarboxylase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24855
symbol: AHG22476.1
gene_biotype: protein_coding
description:
  Malonate decarboxylase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24860
symbol: AHG22477.1
gene_biotype: protein_coding
description:
  Na+-translocating decarboxylase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24945
symbol: AHG22493.1
gene_biotype: protein_coding
description:
  Response regulator in two-component regulatory system with EvgS; phosphorylated EvgA activates ompC, emrKY, gadABC, hdeAB and others genes; involved in acid resistance, osmotic adaption, and drug resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_24995
symbol: AHG22502.2
gene_biotype: protein_coding
description:
  Mechanosensitive ion channel protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_25010
symbol: AHG22503.1
gene_biotype: protein_coding
description:
  Iron ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_25020
symbol: fbpC
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system.


ensembl_gene_id: Z042_25035
symbol: AHG22508.1
gene_biotype: protein_coding
description:
  Catalyzes the hydrolysis of nucleoside triphosphates; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Nudix hydrolase family.


ensembl_gene_id: Z042_25050
symbol: AHG22511.1
gene_biotype: protein_coding
description:
  Ribulose-phosphate 3-epimerase; Catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_25060
symbol: AHG22513.1
gene_biotype: protein_coding
description:
  PTS glucose transporter subunit IIB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_25075
symbol: AHG22515.2
gene_biotype: protein_coding
description:
  Chromate transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_25090
symbol: AHG22518.1
gene_biotype: protein_coding
description:
  Cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: Z042_25115
symbol: AHG22520.1
gene_biotype: protein_coding
description:
  Transcriptional regulator; Global transcription factor that controls the expression of over 100 target genes in response to anoxia; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_25120
symbol: AHG22521.1
gene_biotype: protein_coding
description:
  Universal stress protein UspE; With UspC and UspD is involved in resistance to UV irradiation; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_25125
symbol: fabV
gene_biotype: protein_coding
description:
  trans-2-enoyl-CoA reductase; Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon- carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP); Belongs to the TER reductase family.


ensembl_gene_id: Z042_25130
symbol: pntB
gene_biotype: protein_coding
description:
  Pyridine nucleotide transhydrogenase; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the PNT beta subunit family.


ensembl_gene_id: Z042_25135
symbol: pntA
gene_biotype: protein_coding
description:
  NAD(P) transhydrogenase subunit alpha; The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane; Belongs to the AlaDH/PNT family.


ensembl_gene_id: Z042_25145
symbol: AHG22526.1
gene_biotype: protein_coding
description:
  Dihydromonapterin reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_25150
symbol: AHG22527.1
gene_biotype: protein_coding
description:
  Response regulator in two-component regulatory system with RstB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_25155
symbol: AHG22528.1
gene_biotype: protein_coding
description:
  Sensor protein RstB; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_25160
symbol: AHG22529.1
gene_biotype: protein_coding
description:
  Peptidase M32; Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues.


ensembl_gene_id: Z042_25165
symbol: AHG22530.1
gene_biotype: protein_coding
description:
  Acid-shock protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_25205
symbol: AHG22535.1
gene_biotype: protein_coding
description:
  Type VI secretion protein Vgr; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_25215
symbol: AHG22536.2
gene_biotype: protein_coding
description:
  ATP-dependent helicase HrpA; Involved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_25220
symbol: azoR-2
gene_biotype: protein_coding
description:
  FMN-dependent NADH-azoreductase; Catalyzes the reductive cleavage of azo bond in aromatic azo compounds to the corresponding amines. Requires NADH, but not NADPH, as an electron donor for its activity; Belongs to the azoreductase type 1 family.


ensembl_gene_id: Z042_25240
symbol: AHG22541.1
gene_biotype: protein_coding
description:
  Lactate dehydrogenase; Fermentative; catalyzes the formationof pyruvate from lactate; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: Z042_25245
symbol: AHG22542.1
gene_biotype: protein_coding
description:
  Heat-inducible protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_25260
symbol: AHG22545.1
gene_biotype: protein_coding
description:
  Pyruvate-flavodoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_25265
symbol: AHG22546.1
gene_biotype: protein_coding
description:
  Hemin receptor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the globin family.


ensembl_gene_id: Z042_25410
symbol: AJW28886.1
gene_biotype: protein_coding
description:
  tRNA synthetase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_25415
symbol: AJW28887.1
gene_biotype: protein_coding
description:
  Lysophospholipase L2; Lecithinase B; catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine; can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_25430
symbol: AJW28888.1
gene_biotype: protein_coding
description:
  endo-1,4-D-glucanase; Catalyzes the hydrolysis of 1,4-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_25465
symbol: AJW28891.1
gene_biotype: protein_coding
description:
  Membrane protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: Z042_25475
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: Z042_25480
symbol: dinD
gene_biotype: protein_coding
description:
  Damage-inducible protein D; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_25525
symbol: AJW28896.1
gene_biotype: protein_coding
description:
  Tyrosine recombinase; Inversion of on/off regulator of fimA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_25540
symbol: dusB
gene_biotype: protein_coding
description:
  tRNA-dihydrouridine synthase B; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the Dus family. DusB subfamily.


ensembl_gene_id: Z042_25555
symbol: AJW28900.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0307 family.


ensembl_gene_id: Z042_25560
symbol: AJW28901.1
gene_biotype: protein_coding
description:
  L-seryl-tRNA selenium transferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_25605
symbol: hldE
gene_biotype: protein_coding
description:
  Heptose 1-phosphate adenyltransferase; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family.


ensembl_gene_id: Z042_25610
symbol: AJW28984.1
gene_biotype: protein_coding
description:
  Biopolymer transporter ExbB; Membrane spanning protein in TonB-ExbB-ExbD complex; involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_25705
symbol: AJW28986.1
gene_biotype: protein_coding
description:
  Integrating conjugative element protein, PFL_4693 family; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_25755
symbol: macB-3
gene_biotype: protein_coding
description:
  Macrolide transporter; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner.  Part of the tripartite efflux system MacAB-TolC. MacB is a non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the inner membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides; Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.


ensembl_gene_id: Z042_25765
symbol: lplT
gene_biotype: protein_coding
description:
  Lysophospholipid transporter LplT; Catalyzes the facilitated diffusion of 2-acyl-glycero-3- phosphoethanolamine (2-acyl-GPE) into the cell; Belongs to the major facilitator superfamily. LplT (TC 2.A.1.42) family.


ensembl_gene_id: Z042_25815
symbol: napF
gene_biotype: protein_coding
description:
  Ferredoxin; Could be involved in the maturation of NapA, the catalytic subunit of the periplasmic nitrate reductase, before its export into the periplasm; Belongs to the NapF family.


ensembl_gene_id: Z042_25835
symbol: entF
gene_biotype: protein_coding
description:
  Enterobactin synthase subunit F; With EntB, EntD, and EntE forms the multienzyme complex enterobactin synthase; EntF is the serine activating enzyme which catalyzes the formation of the amide and ester bonds of the cyclic enterobactin; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_25840
symbol: AJW28918.1
gene_biotype: protein_coding
description:
  Pullulanase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family.


ensembl_gene_id: Z042_25885
symbol: AJW28920.1
gene_biotype: protein_coding
description:
  Repressor; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S24 family.


ensembl_gene_id: Z042_25930
symbol: AJW28923.1
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate transporter permease; With UgpEC is involved in the uptake of glycerol-3-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_25945
symbol: AJW28925.1
gene_biotype: protein_coding
description:
  MerR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_26050
symbol: AJW28933.1
gene_biotype: protein_coding
description:
  Metal-dependent phosphohydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_26070
symbol: cutC
gene_biotype: protein_coding
description:
  Copper homeostasis protein CutC; Participates in the control of copper homeostasis. Belongs to the CutC family.


ensembl_gene_id: Z042_26095
symbol: AJW28939.1
gene_biotype: protein_coding
description:
  Acetaldehyde dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.


ensembl_gene_id: Z042_26105
symbol: AJW28941.1
gene_biotype: protein_coding
description:
  Intracellular septation protein A; Involved in cell division; probably involved in intracellular septation; Belongs to the YciB family.


ensembl_gene_id: Z042_26120
symbol: AJW28944.1
gene_biotype: protein_coding
description:
  Peptide ABC transporter ATP-binding protein; Involved in resistance to antimibial peptides; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ABC transporter superfamily.


ensembl_gene_id: Z042_26145
symbol: AJW28947.1
gene_biotype: protein_coding
description:
  Cytochrome C biogenesis protein CcdA; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_26150
symbol: xylB-2
gene_biotype: protein_coding
description:
  Xylulose kinase; Catalyzes the formation of D-xylulose-5-phosphate fro D-xylulose; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_26155
symbol: AJW28949.1
gene_biotype: protein_coding
description:
  D-arabinitol 4-dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_26170
symbol: AJW28994.1
gene_biotype: protein_coding
description:
  triphosphoribosyl-dephospho-CoA synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_26175
symbol: AJW28995.1
gene_biotype: protein_coding
description:
  Malonate decarboxylase subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_26205
symbol: AJW28952.1
gene_biotype: protein_coding
description:
  Colicin V synthesis protein; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_26215
symbol: AJW28954.1
gene_biotype: protein_coding
description:
  YdiK; inner membrane protein; ydiK promoter presents a PurR sequence, suggesting that its expression is purine-regulated; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_26220
symbol: arnA
gene_biotype: protein_coding
description:
  UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Bifunctional enzyme that catalyzes the oxidative decarboxylation of UDP-glucuronic acid (UDP-GlcUA) to UDP-4-keto- arabinose (UDP-Ara4O) and the addition of a formyl group to UDP-4- amino-4-deoxy-L-arabinose (UDP-L-Ara4N) to form UDP-L-4-formamido- arabinose (UDP-L-Ara4FN). The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides; In the N-terminal section; belongs to the Fmt family. UDP- L-Ara4N formyltransferase subfamily.


ensembl_gene_id: Z042_26225
symbol: arnC
gene_biotype: protein_coding
description:
  UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase; Catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate. The modified arabinose is attached to lipid A and is required for resistance to polymyxin and cationic antimicrobial peptides.


ensembl_gene_id: Z042_26260
symbol: AJW28958.1
gene_biotype: protein_coding
description:
  Sensor protein PhoQ; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_26315
symbol: AJW28961.1
gene_biotype: protein_coding
description:
  Recombinase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_26330
symbol: AJW28962.1
gene_biotype: protein_coding
description:
  Prophage PSSB64-02; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_26345
symbol: AJW29002.1
gene_biotype: protein_coding
description:
  Protease 2; PtrB; oligopeptidase that cleaves peptide bonds following arginine and lysine residues; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_26360
symbol: AJW28965.1
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase accessory factor YcaO; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_26365
symbol: AJW28966.1
gene_biotype: protein_coding
description:
  Pyruvate formate-lyase; Formate acetyltransferase; catalyzes the formation of formate and acetyl-CoA from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_26370
symbol: AJW28967.1
gene_biotype: protein_coding
description:
  UTP--glucose-1-phosphate uridylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_26375
symbol: AJW28968.1
gene_biotype: protein_coding
description:
  Together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase, an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate; regulates cellular levels of UDP-glucose; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_26385
symbol: AJW28969.1
gene_biotype: protein_coding
description:
  Fucose permease; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_26435
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (guanine-N1)-methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: Z042_26450
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: Z042_26455
symbol: ddl
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: Z042_26460
symbol: AJW28977.1
gene_biotype: protein_coding
description:
  Hydroxyglutarate oxidase; Catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.


ensembl_gene_id: Z042_26490
symbol: AJW29005.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 28 family.


