# geneInfo

ensembl_gene_id: SAMN04488502_101100
symbol: tgt
gene_biotype: protein_coding
description:
  Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...]


ensembl_gene_id: SAMN04488502_1011000
symbol: SDL85357.1
gene_biotype: protein_coding
description:
  Molybdopterin molybdotransferase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN04488502_1011004
symbol: SDL85505.1
gene_biotype: protein_coding
description:
  Anaerobic dimethyl sulfoxide reductase subunit A; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN04488502_1011005
symbol: tatA
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatA; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. TatA could form the protein-conducting channel of the Tat system.


ensembl_gene_id: SAMN04488502_1011026
symbol: SDL86317.1
gene_biotype: protein_coding
description:
  Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: SAMN04488502_1011043
symbol: SDL86943.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN04488502_1011044
symbol: SDL86979.1
gene_biotype: protein_coding
description:
  Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN04488502_1011047
symbol: SDL87078.1
gene_biotype: protein_coding
description:
  Sodium/proton-potassium antiporter GerN, CPA2 family; Belongs to the monovalent cation:proton antiporter 2 (CPA2) transporter (TC 2.A.37) family.


ensembl_gene_id: SAMN04488502_1011050
symbol: SDL87184.1
gene_biotype: protein_coding
description:
  AraC family transcriptional regulator, regulatory protein of adaptative response / methylphosphotriester-DNA alkyltransferase methyltransferase.


ensembl_gene_id: SAMN04488502_101106
symbol: secD
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: SAMN04488502_1011061
symbol: SDL87572.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional response regulator, NtrC family, contains REC, AAA-type ATPase, and a Fis-type DNA-binding domains.


ensembl_gene_id: SAMN04488502_101107
symbol: secF
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecF; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA.


ensembl_gene_id: SAMN04488502_1011070
symbol: SDL87868.1
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-mannosaminuronic acid dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: SAMN04488502_1011072
symbol: SDL87928.1
gene_biotype: protein_coding
description:
  DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.


ensembl_gene_id: SAMN04488502_1011124
symbol: SDL89868.1
gene_biotype: protein_coding
description:
  23S rRNA (uracil1939-C5)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.


ensembl_gene_id: SAMN04488502_1011128
symbol: gatB
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatB/GatE family. GatB subfamily.


ensembl_gene_id: SAMN04488502_1011129
symbol: gatA
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln).


ensembl_gene_id: SAMN04488502_101113
symbol: apt
gene_biotype: protein_coding
description:
  Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.


ensembl_gene_id: SAMN04488502_1011130
symbol: gatC
gene_biotype: protein_coding
description:
  aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.


ensembl_gene_id: SAMN04488502_1011131
symbol: ligA
gene_biotype: protein_coding
description:
  DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.


ensembl_gene_id: SAMN04488502_101114
symbol: SDL52255.1
gene_biotype: protein_coding
description:
  GTP pyrophosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.


ensembl_gene_id: SAMN04488502_1011142
symbol: hisF
gene_biotype: protein_coding
description:
  Cyclase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit.


ensembl_gene_id: SAMN04488502_1011143
symbol: hisA
gene_biotype: protein_coding
description:
  1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase.


ensembl_gene_id: SAMN04488502_1011144
symbol: hisH
gene_biotype: protein_coding
description:
  Glutamine amidotransferase; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF.


ensembl_gene_id: SAMN04488502_1011146
symbol: hisC
gene_biotype: protein_coding
description:
  Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily.


ensembl_gene_id: SAMN04488502_1011147
symbol: hisD
gene_biotype: protein_coding
description:
  Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.


ensembl_gene_id: SAMN04488502_1011148
symbol: hisG
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase; Catalyzes the condensation of ATP and 5-phosphoribose 1- diphosphate to form N'-(5'-phosphoribosyl)-ATP (PR-ATP). Has a crucial role in the pathway because the rate of histidine biosynthesis seems to be controlled primarily by regulation of HisG enzymatic activity. Belongs to the ATP phosphoribosyltransferase family. Short subfamily.


ensembl_gene_id: SAMN04488502_1011151
symbol: hisZ
gene_biotype: protein_coding
description:
  ATP phosphoribosyltransferase regulatory subunit; Required for the first step of histidine biosynthesis. May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine.


ensembl_gene_id: SAMN04488502_1011160
symbol: purN
gene_biotype: protein_coding
description:
  Phosphoribosylglycinamide formyltransferase-1; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.


ensembl_gene_id: SAMN04488502_1011162
symbol: purF
gene_biotype: protein_coding
description:
  Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.


ensembl_gene_id: SAMN04488502_1011164
symbol: purE
gene_biotype: protein_coding
description:
  5-(carboxyamino)imidazole ribonucleotide mutase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).


ensembl_gene_id: SAMN04488502_1011184
symbol: SDL92166.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase II; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: SAMN04488502_101120
symbol: aspS
gene_biotype: protein_coding
description:
  aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps: L-aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn); Belongs to the class-II aminoacyl-tRNA synthetase family. Type 1 subfamily.


ensembl_gene_id: SAMN04488502_1011212
symbol: SDL93176.1
gene_biotype: protein_coding
description:
  tRNA nucleotidyltransferase (CCA-adding enzyme); Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: SAMN04488502_1011229
symbol: mqnC
gene_biotype: protein_coding
description:
  De-hypoxanthine futalosine cyclase; Radical SAM enzyme that catalyzes the cyclization of dehypoxanthine futalosine (DHFL) into cyclic dehypoxanthine futalosine (CDHFL), a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: SAMN04488502_1011230
symbol: mqnA
gene_biotype: protein_coding
description:
  Chorismate dehydratase; Catalyzes the dehydration of chorismate into 3-[(1- carboxyvinyl)oxy]benzoate, a step in the biosynthesis of menaquinone (MK, vitamin K2).


ensembl_gene_id: SAMN04488502_1011231
symbol: mqnE
gene_biotype: protein_coding
description:
  Aminodeoxyfutalosine synthase; Radical SAM enzyme that catalyzes the addition of the adenosyl radical to the double bond of 3-[(1-carboxyvinyl)oxy]benzoate, leading to aminodeoxyfutalosine (AFL), a key intermediate in the formation of menaquinone (MK, vitamin K2) from chorismate.


ensembl_gene_id: SAMN04488502_101124
symbol: iscS
gene_biotype: protein_coding
description:
  Cysteine desulfurase; Master enzyme that delivers sulfur to a number of partners involved in Fe-S cluster assembly, tRNA modification or cofactor biosynthesis. Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine. Functions as a sulfur delivery protein for Fe-S cluster synthesis onto IscU, an Fe-S scaffold assembly protein, as well as other S acceptor proteins; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. NifS/IscS subfamily.


ensembl_gene_id: SAMN04488502_101126
symbol: mnmA
gene_biotype: protein_coding
description:
  tRNA-specific 2-thiouridylase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.


ensembl_gene_id: SAMN04488502_101131
symbol: alaS
gene_biotype: protein_coding
description:
  alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.


ensembl_gene_id: SAMN04488502_101133
symbol: SDL53115.1
gene_biotype: protein_coding
description:
  Putative holliday junction resolvase; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF HJR family.


ensembl_gene_id: SAMN04488502_101136
symbol: mltG
gene_biotype: protein_coding
description:
  UPF0755 protein; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation.


ensembl_gene_id: SAMN04488502_101141
symbol: aroQ
gene_biotype: protein_coding
description:
  3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.


ensembl_gene_id: SAMN04488502_101143
symbol: efp
gene_biotype: protein_coding
description:
  Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.


ensembl_gene_id: SAMN04488502_101161
symbol: nusB
gene_biotype: protein_coding
description:
  NusB antitermination factor; Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons.


ensembl_gene_id: SAMN04488502_101164
symbol: xseA
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.


ensembl_gene_id: SAMN04488502_101165
symbol: xseB
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.


ensembl_gene_id: SAMN04488502_101168
symbol: dxs
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D- xylulose-5-phosphate (DXP); Belongs to the transketolase family. DXPS subfamily.


ensembl_gene_id: SAMN04488502_101170
symbol: nadK
gene_biotype: protein_coding
description:
  NAD+ kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.


ensembl_gene_id: SAMN04488502_101173
symbol: SDL55017.1
gene_biotype: protein_coding
description:
  DNA repair protein RecN (Recombination protein N); May be involved in recombinational repair of damaged DNA.


ensembl_gene_id: SAMN04488502_101175
symbol: SDL55105.1
gene_biotype: protein_coding
description:
  Two-component system, response regulator, stage 0 sporulation protein A; May play the central regulatory role in sporulation. It may be an element of the effector pathway responsible for the activation of sporulation genes in response to nutritional stress. Spo0A may act in concert with spo0H (a sigma factor) to control the expression of some genes that are critical to the sporulation process.


ensembl_gene_id: SAMN04488502_101182
symbol: xerD
gene_biotype: protein_coding
description:
  Integrase/recombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.


ensembl_gene_id: SAMN04488502_101183
symbol: deoB
gene_biotype: protein_coding
description:
  Phosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family.


ensembl_gene_id: SAMN04488502_101185
symbol: SDL55499.1
gene_biotype: protein_coding
description:
  D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5/6); Belongs to the peptidase S11 family.


ensembl_gene_id: SAMN04488502_101188
symbol: SDL55608.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma subunit, RpoX/SigF; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN04488502_101199
symbol: lysA
gene_biotype: protein_coding
description:
  Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.


ensembl_gene_id: SAMN04488502_101202
symbol: scpA
gene_biotype: protein_coding
description:
  Condensin subunit ScpA; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: SAMN04488502_101203
symbol: SDL56122.1
gene_biotype: protein_coding
description:
  Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.


ensembl_gene_id: SAMN04488502_101207
symbol: SDL56229.1
gene_biotype: protein_coding
description:
  Acetaldehyde dehydrogenase /alcohol dehydrogenase AdhE; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.


ensembl_gene_id: SAMN04488502_101218
symbol: aroA
gene_biotype: protein_coding
description:
  3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.


ensembl_gene_id: SAMN04488502_101220
symbol: SDL56592.1
gene_biotype: protein_coding
description:
  1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.


ensembl_gene_id: SAMN04488502_101222
symbol: ispH
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family.


ensembl_gene_id: SAMN04488502_101223
symbol: fni
gene_biotype: protein_coding
description:
  Isopentenyl-diphosphate delta-isomerase; Involved in the biosynthesis of isoprenoids. Catalyzes the 1,3-allylic rearrangement of the homoallylic substrate isopentenyl (IPP) to its allylic isomer, dimethylallyl diphosphate (DMAPP).


ensembl_gene_id: SAMN04488502_101227
symbol: der
gene_biotype: protein_coding
description:
  GTP-binding protein; GTPase that plays an essential role in the late steps of ribosome biogenesis; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngA (Der) GTPase family.


ensembl_gene_id: SAMN04488502_101228
symbol: plsY
gene_biotype: protein_coding
description:
  Glycerol-3-phosphate acyltransferase PlsY; Catalyzes the transfer of an acyl group from acyl-phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP.


ensembl_gene_id: SAMN04488502_101229
symbol: gpsA
gene_biotype: protein_coding
description:
  Glycerol 3-phosphate dehydrogenase (NAD(P)+); Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN04488502_10123
symbol: SDL48611.1
gene_biotype: protein_coding
description:
  Anaerobic ribonucleoside-triphosphate reductase activating protein; Activation of anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions by generation of an organic free radical, using S-adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine.


ensembl_gene_id: SAMN04488502_101233
symbol: thrB
gene_biotype: protein_coding
description:
  Homoserine kinase; Catalyzes the ATP-dependent phosphorylation of L-homoserine to L-homoserine phosphate; Belongs to the GHMP kinase family. Homoserine kinase subfamily.


ensembl_gene_id: SAMN04488502_101245
symbol: SDL57360.1
gene_biotype: protein_coding
description:
  Putrescine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN04488502_101249
symbol: ndk
gene_biotype: protein_coding
description:
  Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.


ensembl_gene_id: SAMN04488502_10125
symbol: cobT
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; Catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide (NAMN) and 5,6-dimethylbenzimidazole (DMB).


ensembl_gene_id: SAMN04488502_101251
symbol: bioC
gene_biotype: protein_coding
description:
  malonyl-CoA O-methyltransferase; Converts the free carboxyl group of a malonyl-thioester to its methyl ester by transfer of a methyl group from S-adenosyl-L- methionine (SAM). It allows to synthesize pimeloyl-ACP via the fatty acid synthetic pathway.


ensembl_gene_id: SAMN04488502_101258
symbol: coaD
gene_biotype: protein_coding
description:
  Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.


ensembl_gene_id: SAMN04488502_101262
symbol: tmcAL
gene_biotype: protein_coding
description:
  Predicted nucleotidyltransferase; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.


ensembl_gene_id: SAMN04488502_101263
symbol: ackA
gene_biotype: protein_coding
description:
  Acetate kinase; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family.


ensembl_gene_id: SAMN04488502_101267
symbol: plsX
gene_biotype: protein_coding
description:
  Phosphate:acyl-[acyl carrier protein] acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA.


ensembl_gene_id: SAMN04488502_101268
symbol: fabH
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase III; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family.


ensembl_gene_id: SAMN04488502_101271
symbol: SDL58196.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN04488502_101274
symbol: SDL58314.1
gene_biotype: protein_coding
description:
  3-oxoacyl-[acyl-carrier-protein] synthase II; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.


ensembl_gene_id: SAMN04488502_101275
symbol: rnc
gene_biotype: protein_coding
description:
  RNAse III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.


ensembl_gene_id: SAMN04488502_101279
symbol: smc
gene_biotype: protein_coding
description:
  Condensin subunit Smc; Required for chromosome condensation and partitioning. Belongs to the SMC family.


ensembl_gene_id: SAMN04488502_101280
symbol: ftsY
gene_biotype: protein_coding
description:
  Fused signal recognition particle receptor; Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Acts as a receptor for the complex formed by the signal recognition particle (SRP) and the ribosome-nascent chain (RNC).


ensembl_gene_id: SAMN04488502_101281
symbol: SDL58615.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Might take part in the signal recognition particle (SRP) pathway. This is inferred from the conservation of its genetic proximity to ftsY/ffh. May be a regulatory protein.


ensembl_gene_id: SAMN04488502_101282
symbol: ffh
gene_biotype: protein_coding
description:
  Signal recognition particle subunit FFH/SRP54 (srp54); Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY. Belongs to the GTP-binding SRP family. SRP54 subfamily.


ensembl_gene_id: SAMN04488502_101286
symbol: rimM
gene_biotype: protein_coding
description:
  16S rRNA processing protein RimM; An accessory protein needed during the final step in the assembly of 30S ribosomal subunit, possibly for assembly of the head region. Probably interacts with S19. Essential for efficient processing of 16S rRNA. May be needed both before and after RbfA during the maturation of 16S rRNA. It has affinity for free ribosomal 30S subunits but not for 70S ribosomes; Belongs to the RimM family.


ensembl_gene_id: SAMN04488502_101287
symbol: trmD
gene_biotype: protein_coding
description:
  tRNA (Guanine37-N(1)-) methyltransferase; Specifically methylates guanosine-37 in various tRNAs. Belongs to the RNA methyltransferase TrmD family.


ensembl_gene_id: SAMN04488502_101289
symbol: rplS
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.


ensembl_gene_id: SAMN04488502_101291
symbol: SDL59026.1
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase A; Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity; Belongs to the TRAFAC class YlqF/YawG GTPase family. MTG1 subfamily.


ensembl_gene_id: SAMN04488502_101297
symbol: ubiX
gene_biotype: protein_coding
description:
  4-hydroxy-3-polyprenylbenzoate decarboxylase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.


ensembl_gene_id: SAMN04488502_1013
symbol: SDL47770.1
gene_biotype: protein_coding
description:
  Thiol peroxidase (atypical 2-Cys peroxiredoxin); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides.


ensembl_gene_id: SAMN04488502_10130
symbol: thrS
gene_biotype: protein_coding
description:
  threonyl-tRNA synthetase; Catalyzes the attachment of threonine to tRNA(Thr) in a two- step reaction: L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr).


ensembl_gene_id: SAMN04488502_101303
symbol: iolA
gene_biotype: protein_coding
description:
  Malonate-semialdehyde dehydrogenase (acetylating) / methylmalonate-semialdehyde dehydrogenase; Catalyzes the oxidation of malonate semialdehyde (MSA) and methylmalonate semialdehyde (MMSA) into acetyl-CoA and propanoyl-CoA, respectively.


ensembl_gene_id: SAMN04488502_101316
symbol: rpoZ
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.


ensembl_gene_id: SAMN04488502_101318
symbol: aroE
gene_biotype: protein_coding
description:
  Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).


ensembl_gene_id: SAMN04488502_10132
symbol: infC
gene_biotype: protein_coding
description:
  Translation initiation factor IF-3; IF-3 binds to the 30S ribosomal subunit and shifts the equilibrum between 70S ribosomes and their 50S and 30S subunits in favor of the free subunits, thus enhancing the availability of 30S subunits on which protein synthesis initiation begins.


ensembl_gene_id: SAMN04488502_101322
symbol: SDL60255.1
gene_biotype: protein_coding
description:
  Type 4 prepilin peptidase 1 Aspartic peptidase. MEROPS family A24A; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.


ensembl_gene_id: SAMN04488502_101331
symbol: aroC
gene_biotype: protein_coding
description:
  Chorismate synthase; Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system.


ensembl_gene_id: SAMN04488502_101332
symbol: aroK
gene_biotype: protein_coding
description:
  Shikimate kinase; Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate; Belongs to the shikimate kinase family.


ensembl_gene_id: SAMN04488502_101333
symbol: aroB
gene_biotype: protein_coding
description:
  3-dehydroquinate synthase; Catalyzes the conversion of 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) to dehydroquinate (DHQ).


ensembl_gene_id: SAMN04488502_101334
symbol: pfkA
gene_biotype: protein_coding
description:
  6-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis.


ensembl_gene_id: SAMN04488502_101337
symbol: larC
gene_biotype: protein_coding
description:
  Hypothetical protein; Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2+), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor-dependent enzymes. Belongs to the LarC family.


ensembl_gene_id: SAMN04488502_101338
symbol: queC
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine synthase; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)).


ensembl_gene_id: SAMN04488502_10134
symbol: rplT
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.


ensembl_gene_id: SAMN04488502_101342
symbol: mprF
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the transfer of a lysyl group from L-lysyl- tRNA(Lys) to membrane-bound phosphatidylglycerol (PG), which produces lysylphosphatidylglycerol (LPG), a major component of the bacterial membrane with a positive net charge. LPG synthesis contributes to bacterial virulence as it is involved in the resistance mechanism against cationic antimicrobial peptides (CAMP) produces by the host's immune system (defensins, cathelicidins) and by the competing microorganisms.


ensembl_gene_id: SAMN04488502_101352
symbol: cbiD
gene_biotype: protein_coding
description:
  Cobalt-precorrin 5B C1-methyltransferase; Catalyzes the methylation of C-1 in cobalt-precorrin-5B to form cobalt-precorrin-6A.


ensembl_gene_id: SAMN04488502_101361
symbol: cbiA
gene_biotype: protein_coding
description:
  Cobyrinic acid a,c-diamide synthase; Catalyzes the ATP-dependent amidation of the two carboxylate groups at positions a and c of cobyrinate, using either L-glutamine or ammonia as the nitrogen source; Belongs to the CobB/CbiA family.


ensembl_gene_id: SAMN04488502_101363
symbol: cobQ
gene_biotype: protein_coding
description:
  Adenosylcobyric acid synthase (glutamine-hydrolysing); Catalyzes amidations at positions B, D, E, and G on adenosylcobyrinic A,C-diamide. NH(2) groups are provided by glutamine, and one molecule of ATP is hydrogenolyzed for each amidation. Belongs to the CobB/CobQ family. CobQ subfamily.


ensembl_gene_id: SAMN04488502_101364
symbol: cobD
gene_biotype: protein_coding
description:
  Adenosylcobinamide-phosphate synthase; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group.


ensembl_gene_id: SAMN04488502_101365
symbol: cobS
gene_biotype: protein_coding
description:
  Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family.


ensembl_gene_id: SAMN04488502_101370
symbol: polC
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit alpha; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN04488502_101371
symbol: rimP
gene_biotype: protein_coding
description:
  Ribosome maturation factor RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.


ensembl_gene_id: SAMN04488502_101375
symbol: infB
gene_biotype: protein_coding
description:
  Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.


ensembl_gene_id: SAMN04488502_101376
symbol: rbfA
gene_biotype: protein_coding
description:
  Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.


ensembl_gene_id: SAMN04488502_101378
symbol: truB
gene_biotype: protein_coding
description:
  tRNA pseudouridine55 synthase; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.


ensembl_gene_id: SAMN04488502_101383
symbol: SDL62554.1
gene_biotype: protein_coding
description:
  Quinolinate synthetase; Catalyzes the condensation of iminoaspartate with dihydroxyacetone phosphate to form quinolinate.


ensembl_gene_id: SAMN04488502_101385
symbol: rpsO
gene_biotype: protein_coding
description:
  SSU ribosomal protein S15P; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.


ensembl_gene_id: SAMN04488502_101386
symbol: pnp
gene_biotype: protein_coding
description:
  Polyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction.


ensembl_gene_id: SAMN04488502_101387
symbol: SDL62703.1
gene_biotype: protein_coding
description:
  Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.


ensembl_gene_id: SAMN04488502_10139
symbol: SDL49152.1
gene_biotype: protein_coding
description:
  RNA methyltransferase, TrmH family; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN04488502_101391
symbol: SDL62829.1
gene_biotype: protein_coding
description:
  Fur family transcriptional regulator, peroxide stress response regulator; Belongs to the Fur family.


ensembl_gene_id: SAMN04488502_101392
symbol: katG
gene_biotype: protein_coding
description:
  Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily.


ensembl_gene_id: SAMN04488502_101398
symbol: SDL63052.1
gene_biotype: protein_coding
description:
  dUTP pyrophosphatase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA.


ensembl_gene_id: SAMN04488502_10140
symbol: pheS
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily.


ensembl_gene_id: SAMN04488502_101405
symbol: dapB
gene_biotype: protein_coding
description:
  Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.


ensembl_gene_id: SAMN04488502_101406
symbol: asd
gene_biotype: protein_coding
description:
  Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.


ensembl_gene_id: SAMN04488502_101408
symbol: dapA
gene_biotype: protein_coding
description:
  4-hydroxy-tetrahydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).


ensembl_gene_id: SAMN04488502_101409
symbol: rnj
gene_biotype: protein_coding
description:
  Ribonuclease J; An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and/or decay.


ensembl_gene_id: SAMN04488502_10141
symbol: pheT
gene_biotype: protein_coding
description:
  phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.


ensembl_gene_id: SAMN04488502_101416
symbol: rimO
gene_biotype: protein_coding
description:
  Ribosomal protein S12 methylthiotransferase; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.


ensembl_gene_id: SAMN04488502_101420
symbol: recA
gene_biotype: protein_coding
description:
  Recombination protein RecA; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family.


ensembl_gene_id: SAMN04488502_101426
symbol: pepA
gene_biotype: protein_coding
description:
  Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.


ensembl_gene_id: SAMN04488502_101433
symbol: miaB
gene_biotype: protein_coding
description:
  tRNA-2-methylthio-N6-dimethylallyladenosine synthase; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.


ensembl_gene_id: SAMN04488502_101434
symbol: mutS
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity.


ensembl_gene_id: SAMN04488502_101435
symbol: mutL
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex.


ensembl_gene_id: SAMN04488502_101437
symbol: miaA
gene_biotype: protein_coding
description:
  tRNA dimethylallyltransferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A); Belongs to the IPP transferase family.


ensembl_gene_id: SAMN04488502_101438
symbol: hfq
gene_biotype: protein_coding
description:
  RNA-binding protein Hfq; RNA chaperone that binds small regulatory RNA (sRNAs) and mRNAs to facilitate mRNA translational regulation in response to envelope stress, environmental stress and changes in metabolite concentrations. Also binds with high specificity to tRNAs. Belongs to the Hfq family.


ensembl_gene_id: SAMN04488502_101454
symbol: hflX
gene_biotype: protein_coding
description:
  GTP-binding protein HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.


ensembl_gene_id: SAMN04488502_101469
symbol: lexA
gene_biotype: protein_coding
description:
  Repressor LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair.


ensembl_gene_id: SAMN04488502_101511
symbol: SDL67186.1
gene_biotype: protein_coding
description:
  Polynucleotide 3'-phosphatase /polynucleotide 5'-hydroxyl-kinase /polynucleotide 2',3'-cyclic phosphate phosphodiesterase.


ensembl_gene_id: SAMN04488502_101519
symbol: mtaD
gene_biotype: protein_coding
description:
  5-methylthioadenosine/S-adenosylhomocysteine deaminase; Catalyzes the deamination of 5-methylthioadenosine and S- adenosyl-L-homocysteine into 5-methylthioinosine and S-inosyl-L- homocysteine, respectively. Is also able to deaminate adenosine. Belongs to the metallo-dependent hydrolases superfamily. MTA/SAH deaminase family.


ensembl_gene_id: SAMN04488502_101522
symbol: mtnA
gene_biotype: protein_coding
description:
  Methylthioribose-1-phosphate isomerase; Catalyzes the interconversion of methylthioribose-1-phosphate (MTR-1-P) into methylthioribulose-1-phosphate (MTRu-1-P).


ensembl_gene_id: SAMN04488502_101523
symbol: SDL67651.1
gene_biotype: protein_coding
description:
  Methylthioadenosine phosphorylase; Purine nucleoside phosphorylase which is highly specific for 6-oxopurine nucleosides. Cleaves guanosine or inosine to respective bases and sugar-1-phosphate molecules. Involved in purine salvage.


ensembl_gene_id: SAMN04488502_101525
symbol: surE
gene_biotype: protein_coding
description:
  5'-nucleotidase /3'-nucleotidase; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.


ensembl_gene_id: SAMN04488502_101526
symbol: queE
gene_biotype: protein_coding
description:
  Organic radical activating enzyme; Catalyzes the complex heterocyclic radical-mediated conversion of 6-carboxy-5,6,7,8-tetrahydropterin (CPH4) to 7-carboxy-7- deazaguanine (CDG), a step common to the biosynthetic pathways of all 7-deazapurine-containing compounds.


ensembl_gene_id: SAMN04488502_101528
symbol: SDL67868.1
gene_biotype: protein_coding
description:
  Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.


ensembl_gene_id: SAMN04488502_101529
symbol: SDL67933.1
gene_biotype: protein_coding
description:
  CDP-diacylglycerol---serine O-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.


ensembl_gene_id: SAMN04488502_101530
symbol: psd
gene_biotype: protein_coding
description:
  Phosphatidylserine decarboxylase; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer).


ensembl_gene_id: SAMN04488502_101531
symbol: SDL68004.1
gene_biotype: protein_coding
description:
  N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; Catalyzes the conversion of GlcNAc-PP-undecaprenol into ManNAc-GlcNAc-PP-undecaprenol, the first committed lipid intermediate in the de novo synthesis of teichoic acid.


ensembl_gene_id: SAMN04488502_101533
symbol: guaB
gene_biotype: protein_coding
description:
  IMP dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family.


ensembl_gene_id: SAMN04488502_101538
symbol: recG
gene_biotype: protein_coding
description:
  ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN04488502_101540
symbol: hslO
gene_biotype: protein_coding
description:
  Molecular chaperone Hsp33; Redox regulated molecular chaperone. Protects both thermally unfolding and oxidatively damaged proteins from irreversible aggregation. Plays an important role in the bacterial defense system toward oxidative stress.


ensembl_gene_id: SAMN04488502_101542
symbol: ribH
gene_biotype: protein_coding
description:
  6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin.


ensembl_gene_id: SAMN04488502_101543
symbol: ribBA
gene_biotype: protein_coding
description:
  3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.


ensembl_gene_id: SAMN04488502_101545
symbol: SDL68512.1
gene_biotype: protein_coding
description:
  Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.


ensembl_gene_id: SAMN04488502_101548
symbol: rsgA
gene_biotype: protein_coding
description:
  Ribosome biogenesis GTPase; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Helps release RbfA from mature subunits. May play a role in the assembly of ribosomal proteins into the subunit. Circularly permuted GTPase that catalyzes slow GTP hydrolysis, GTPase activity is stimulated by the 30S ribosomal subunit; Belongs to the TRAFAC class YlqF/YawG GTPase family. RsgA subfamily.


ensembl_gene_id: SAMN04488502_101555
symbol: rlmN
gene_biotype: protein_coding
description:
  23S rRNA (adenine2503-C2)-methyltransferase; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs; Belongs to the radical SAM superfamily. RlmN family.


ensembl_gene_id: SAMN04488502_101556
symbol: SDL68890.1
gene_biotype: protein_coding
description:
  NusB antitermination factor; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA.


ensembl_gene_id: SAMN04488502_101558
symbol: fmt
gene_biotype: protein_coding
description:
  methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.


ensembl_gene_id: SAMN04488502_101559
symbol: def
gene_biotype: protein_coding
description:
  Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions.


ensembl_gene_id: SAMN04488502_101560
symbol: priA
gene_biotype: protein_coding
description:
  Replication restart DNA helicase PriA; Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA; Belongs to the helicase family. PriA subfamily.


ensembl_gene_id: SAMN04488502_101562
symbol: metK
gene_biotype: protein_coding
description:
  Methionine adenosyltransferase; Catalyzes the formation of S-adenosylmethionine (AdoMet) from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme.


ensembl_gene_id: SAMN04488502_101564
symbol: SDL69150.1
gene_biotype: protein_coding
description:
  Phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family.


ensembl_gene_id: SAMN04488502_101571
symbol: dapF
gene_biotype: protein_coding
description:
  Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.


ensembl_gene_id: SAMN04488502_101573
symbol: SDL69407.1
gene_biotype: protein_coding
description:
  Predicted component of the ribosome quality control (RQC) complex, YloA/Tae2 family, contains fibronectin-binding (FbpA) and DUF814 domains.


ensembl_gene_id: SAMN04488502_101574
symbol: pyrR
gene_biotype: protein_coding
description:
  Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant; Belongs to the purine/pyrimidine phosphoribosyltransferase family. PyrR subfamily.


ensembl_gene_id: SAMN04488502_101575
symbol: SDL69459.1
gene_biotype: protein_coding
description:
  23S rRNA pseudouridine1911/1915/1917 synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.


ensembl_gene_id: SAMN04488502_101576
symbol: lspA
gene_biotype: protein_coding
description:
  Signal peptidase II; This protein specifically catalyzes the removal of signal peptides from prolipoproteins; Belongs to the peptidase A8 family.


ensembl_gene_id: SAMN04488502_101587
symbol: ileS
gene_biotype: protein_coding
description:
  Isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile). Belongs to the class-I aminoacyl-tRNA synthetase family. IleS type 1 subfamily.


ensembl_gene_id: SAMN04488502_101591
symbol: proC
gene_biotype: protein_coding
description:
  Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline.


ensembl_gene_id: SAMN04488502_101592
symbol: sepF
gene_biotype: protein_coding
description:
  Cell division inhibitor SepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA.


ensembl_gene_id: SAMN04488502_101593
symbol: SDL69958.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.


ensembl_gene_id: SAMN04488502_101621
symbol: nrdR
gene_biotype: protein_coding
description:
  Transcriptional repressor NrdR; Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes; Belongs to the NrdR family.


ensembl_gene_id: SAMN04488502_101632
symbol: SDL71365.1
gene_biotype: protein_coding
description:
  L-lysine 6-transaminase precursor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN04488502_101638
symbol: metN
gene_biotype: protein_coding
description:
  D-methionine transport system ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: SAMN04488502_101642
symbol: SDL71744.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma subunit, RpsG/SigG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN04488502_101643
symbol: SDL71783.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 29 subunit, SigE; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN04488502_101645
symbol: ftsZ
gene_biotype: protein_coding
description:
  Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.


ensembl_gene_id: SAMN04488502_101646
symbol: SDL71878.1
gene_biotype: protein_coding
description:
  Cell division protein FtsA; Cell division protein that is involved in the assembly of the Z ring. May serve as a membrane anchor for the Z ring. Belongs to the FtsA/MreB family.


ensembl_gene_id: SAMN04488502_101651
symbol: murA
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 1-carboxyvinyltransferase; Cell wall formation. Adds enolpyruvyl to UDP-N- acetylglucosamine; Belongs to the EPSP synthase family. MurA subfamily.


ensembl_gene_id: SAMN04488502_101653
symbol: murG
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine-N- acetylmuramylpentapeptide N-acetylglucosamine transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily.


ensembl_gene_id: SAMN04488502_101655
symbol: murD
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family.


ensembl_gene_id: SAMN04488502_101656
symbol: mraY
gene_biotype: protein_coding
description:
  Phospho-N-acetylmuramoyl-pentapeptide- transferase; First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Belongs to the glycosyltransferase 4 family. MraY subfamily.


ensembl_gene_id: SAMN04488502_101657
symbol: murF
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; Involved in cell wall formation. Catalyzes the final step in the synthesis of UDP-N-acetylmuramoyl-pentapeptide, the precursor of murein; Belongs to the MurCDEF family. MurF subfamily.


ensembl_gene_id: SAMN04488502_101658
symbol: murE
gene_biotype: protein_coding
description:
  UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.


ensembl_gene_id: SAMN04488502_101661
symbol: rsmH
gene_biotype: protein_coding
description:
  16S rRNA (cytosine1402-N4)-methyltransferase; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.


ensembl_gene_id: SAMN04488502_101668
symbol: SDL72731.1
gene_biotype: protein_coding
description:
  Ferrous iron transport protein B; Probable transporter of a GTP-driven Fe(2+) uptake system. Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. FeoB GTPase (TC 9.A.8) family.


ensembl_gene_id: SAMN04488502_101671
symbol: proS
gene_biotype: protein_coding
description:
  prolyl-tRNA synthetase; Catalyzes the attachment of proline to tRNA(Pro) in a two- step reaction: proline is first activated by ATP to form Pro-AMP and then transferred to the acceptor end of tRNA(Pro). As ProRS can inadvertently accommodate and process non-cognate amino acids such as alanine and cysteine, to avoid such errors it has two additional distinct editing activities against alanine. One activity is designated as 'pretransfer' editing and involves the tRNA(Pro)-independent hydrolysis of activated Ala-AMP. The other activity is designated 'posttransfer' editing and involves dea [...]


ensembl_gene_id: SAMN04488502_101672
symbol: ispG
gene_biotype: protein_coding
description:
  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME- 2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate. Belongs to the IspG family.


ensembl_gene_id: SAMN04488502_101674
symbol: dxr
gene_biotype: protein_coding
description:
  1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family.


ensembl_gene_id: SAMN04488502_101676
symbol: SDL73056.1
gene_biotype: protein_coding
description:
  Undecaprenyl pyrophosphate synthetase; Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids.


ensembl_gene_id: SAMN04488502_101677
symbol: SDL73098.1
gene_biotype: protein_coding
description:
  4Fe-4S dicluster domain-containing protein; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions.


ensembl_gene_id: SAMN04488502_101679
symbol: frr
gene_biotype: protein_coding
description:
  Ribosome recycling factor; Responsible for the release of ribosomes from messenger RNA at the termination of protein biosynthesis. May increase the efficiency of translation by recycling ribosomes from one round of translation to another; Belongs to the RRF family.


ensembl_gene_id: SAMN04488502_101681
symbol: tsf
gene_biotype: protein_coding
description:
  Translation elongation factor Ts (EF-Ts); Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome. Belongs to the EF-Ts family.


ensembl_gene_id: SAMN04488502_101686
symbol: SDL73440.1
gene_biotype: protein_coding
description:
  RNA polymerase sigma factor for flagellar operon FliA; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN04488502_101688
symbol: cheD
gene_biotype: protein_coding
description:
  Chemotaxis protein CheD; Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis; Belongs to the CheD family.


ensembl_gene_id: SAMN04488502_10169
symbol: SDL50335.1
gene_biotype: protein_coding
description:
  Cell division protein ZapA; Activator of cell division through the inhibition of FtsZ GTPase activity, therefore promoting FtsZ assembly into bundles of protofilaments necessary for the formation of the division Z ring. It is recruited early at mid-cell but it is not essential for cell division.


ensembl_gene_id: SAMN04488502_101692
symbol: cheB
gene_biotype: protein_coding
description:
  Two-component system, chemotaxis family, response regulator CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.


ensembl_gene_id: SAMN04488502_101696
symbol: flhA
gene_biotype: protein_coding
description:
  Flagellar biosynthesis protein FlhA; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.


ensembl_gene_id: SAMN04488502_101697
symbol: flhB
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FlhB; Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the type III secretion exporter family.


ensembl_gene_id: SAMN04488502_101698
symbol: SDL73918.1
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliR; Role in flagellar biosynthesis. Belongs to the FliR/MopE/SpaR family.


ensembl_gene_id: SAMN04488502_101699
symbol: fliQ
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliQ; Role in flagellar biosynthesis. Belongs to the FliQ/MopD/SpaQ family.


ensembl_gene_id: SAMN04488502_101700
symbol: fliP
gene_biotype: protein_coding
description:
  Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.


ensembl_gene_id: SAMN04488502_101705
symbol: SDL74211.1
gene_biotype: protein_coding
description:
  Flagellar FliL protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.


ensembl_gene_id: SAMN04488502_101717
symbol: SDL74711.1
gene_biotype: protein_coding
description:
  Flagellar M-ring protein FliF; The M ring may be actively involved in energy transduction. Belongs to the FliF family.


ensembl_gene_id: SAMN04488502_10172
symbol: mutS2
gene_biotype: protein_coding
description:
  DNA mismatch repair protein MutS2; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily.


ensembl_gene_id: SAMN04488502_101720
symbol: SDL74831.1
gene_biotype: protein_coding
description:
  Flagellar basal-body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.


ensembl_gene_id: SAMN04488502_101721
symbol: codY
gene_biotype: protein_coding
description:
  Transcriptional pleiotropic repressor; DNA-binding protein that represses the expression of many genes that are induced as cells make the transition from rapid exponential growth to stationary phase. It is a GTP-binding protein that senses the intracellular GTP concentration as an indicator of nutritional limitations. At low GTP concentration it no longer binds GTP and stop to act as a transcriptional repressor; Belongs to the CodY family.


ensembl_gene_id: SAMN04488502_101722
symbol: hslU
gene_biotype: protein_coding
description:
  ATP-dependent HslUV protease ATP-binding subunit HslU; ATPase subunit of a proteasome-like degradation complex; this subunit has chaperone activity. The binding of ATP and its subsequent hydrolysis by HslU are essential for unfolding of protein substrates subsequently hydrolyzed by HslV. HslU recognizes the N-terminal part of its protein substrates and unfolds these before they are guided to HslV for hydrolysis.


ensembl_gene_id: SAMN04488502_101723
symbol: hslV
gene_biotype: protein_coding
description:
  ATP-dependent HslUV protease, peptidase subunit HslV; Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery.


ensembl_gene_id: SAMN04488502_101724
symbol: trmFO
gene_biotype: protein_coding
description:
  methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase; Catalyzes the folate-dependent formation of 5-methyl-uridine at position 54 (M-5-U54) in all tRNAs; Belongs to the MnmG family. TrmFO subfamily.


ensembl_gene_id: SAMN04488502_101725
symbol: topA
gene_biotype: protein_coding
description:
  DNA topoisomerase-1; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: SAMN04488502_101729
symbol: SDL75170.1
gene_biotype: protein_coding
description:
  Dihydroneopterin aldolase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.


ensembl_gene_id: SAMN04488502_101731
symbol: SDL75251.1
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 27/28 subunit, RpsK/SigK; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.


ensembl_gene_id: SAMN04488502_10174
symbol: SDL50521.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Binds to DNA and alters its conformation. May be involved in regulation of gene expression, nucleoid organization and DNA protection.


ensembl_gene_id: SAMN04488502_101741
symbol: SDL75603.1
gene_biotype: protein_coding
description:
  Chorismate mutase; Catalyzes the Claisen rearrangement of chorismate to prephenate. Probably involved in the aromatic amino acid biosynthesis.


ensembl_gene_id: SAMN04488502_101747
symbol: thiE
gene_biotype: protein_coding
description:
  Thiamine-phosphate diphosphorylase; Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP). Belongs to the thiamine-phosphate synthase family.


ensembl_gene_id: SAMN04488502_101749
symbol: thiG
gene_biotype: protein_coding
description:
  Thiazole-phosphate synthase; Catalyzes the rearrangement of 1-deoxy-D-xylulose 5-phosphate (DXP) to produce the thiazole phosphate moiety of thiamine. Sulfur is provided by the thiocarboxylate moiety of the carrier protein ThiS. In vitro, sulfur can be provided by H(2)S.


ensembl_gene_id: SAMN04488502_101752
symbol: SDL75969.1
gene_biotype: protein_coding
description:
  Dinuclear metal center protein, YbgI/SA1388 family; Belongs to the GTP cyclohydrolase I type 2/NIF3 family.


ensembl_gene_id: SAMN04488502_101758
symbol: sigA
gene_biotype: protein_coding
description:
  RNA polymerase, sigma 70 subunit, RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.


ensembl_gene_id: SAMN04488502_101759
symbol: dnaG
gene_biotype: protein_coding
description:
  DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.


ensembl_gene_id: SAMN04488502_101769
symbol: era
gene_biotype: protein_coding
description:
  GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.


ensembl_gene_id: SAMN04488502_101770
symbol: SDL76524.1
gene_biotype: protein_coding
description:
  Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN04488502_101772
symbol: ybeY
gene_biotype: protein_coding
description:
  Probable rRNA maturation factor; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA.


ensembl_gene_id: SAMN04488502_101789
symbol: SDL77289.1
gene_biotype: protein_coding
description:
  16S rRNA (uracil1498-N3)-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit.


ensembl_gene_id: SAMN04488502_101790
symbol: prmA
gene_biotype: protein_coding
description:
  Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family.


ensembl_gene_id: SAMN04488502_101791
symbol: dnaJ
gene_biotype: protein_coding
description:
  Molecular chaperone DnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, [...]


ensembl_gene_id: SAMN04488502_101793
symbol: grpE
gene_biotype: protein_coding
description:
  Molecular chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP [...]


ensembl_gene_id: SAMN04488502_101795
symbol: hrcA
gene_biotype: protein_coding
description:
  Heat-inducible transcription repressor HrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons.


ensembl_gene_id: SAMN04488502_101796
symbol: SDL77560.1
gene_biotype: protein_coding
description:
  Oxygen-independent coproporphyrinogen-3 oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family.


ensembl_gene_id: SAMN04488502_101797
symbol: lepA
gene_biotype: protein_coding
description:
  GTP-binding protein LepA; Required for accurate and efficient protein synthesis under certain stress conditions. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Back-translocation proceeds from a post-translocation (POST) complex to a pre- translocation (PRE) complex, thus giving elongation factor G a second chance to translocate the tRNAs correctly. Binds to ribosomes in a GTP- dependent manner.


ensembl_gene_id: SAMN04488502_101815
symbol: lgt
gene_biotype: protein_coding
description:
  Phosphatidylglycerol:prolipoprotein diacylglycerol transferase; Catalyzes the transfer of the diacylglyceryl group from phosphatidylglycerol to the sulfhydryl group of the N-terminal cysteine of a prolipoprotein, the first step in the formation of mature lipoproteins; Belongs to the Lgt family.


ensembl_gene_id: SAMN04488502_101824
symbol: glpK
gene_biotype: protein_coding
description:
  Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.


ensembl_gene_id: SAMN04488502_10183
symbol: tyrS
gene_biotype: protein_coding
description:
  tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.


ensembl_gene_id: SAMN04488502_101840
symbol: rsfS
gene_biotype: protein_coding
description:
  Ribosome-associated protein; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.


ensembl_gene_id: SAMN04488502_101844
symbol: nadD
gene_biotype: protein_coding
description:
  Nicotinate-nucleotide adenylyltransferase; Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD).


ensembl_gene_id: SAMN04488502_101846
symbol: proA
gene_biotype: protein_coding
description:
  Glutamate-5-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent reduction of L-glutamate 5- phosphate into L-glutamate 5-semialdehyde and phosphate. The product spontaneously undergoes cyclization to form 1-pyrroline-5-carboxylate. Belongs to the gamma-glutamyl phosphate reductase family.


ensembl_gene_id: SAMN04488502_101847
symbol: proB
gene_biotype: protein_coding
description:
  Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate.


ensembl_gene_id: SAMN04488502_101849
symbol: obg
gene_biotype: protein_coding
description:
  GTP-binding protein; An essential GTPase which binds GTP, GDP and possibly (p)ppGpp with moderate affinity, with high nucleotide exchange rates and a fairly low GTP hydrolysis rate. Plays a role in control of the cell cycle, stress response, ribosome biogenesis and in those bacteria that undergo differentiation, in morphogenesis control. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family.


ensembl_gene_id: SAMN04488502_10185
symbol: SDL50967.1
gene_biotype: protein_coding
description:
  Transcriptional antiterminator NusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: SAMN04488502_101853
symbol: rplU
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.


ensembl_gene_id: SAMN04488502_101859
symbol: rodA
gene_biotype: protein_coding
description:
  Rod shape determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily.


ensembl_gene_id: SAMN04488502_101860
symbol: minE
gene_biotype: protein_coding
description:
  Cell division topological specificity factor MinE; Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell.


ensembl_gene_id: SAMN04488502_101862
symbol: minC
gene_biotype: protein_coding
description:
  Septum site-determining protein MinC; Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize FtsZ filaments that have formed before they mature into polar Z rings. Prevents FtsZ polymerization; Belongs to the MinC family.


ensembl_gene_id: SAMN04488502_101868
symbol: SDL80411.1
gene_biotype: protein_coding
description:
  Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids.


ensembl_gene_id: SAMN04488502_101878
symbol: rex
gene_biotype: protein_coding
description:
  Redox-sensing transcriptional repressor; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.


ensembl_gene_id: SAMN04488502_101880
symbol: SDL80907.1
gene_biotype: protein_coding
description:
  Dihydrofolate synthase / folylpolyglutamate synthase; Belongs to the folylpolyglutamate synthase family.


ensembl_gene_id: SAMN04488502_101881
symbol: valS
gene_biotype: protein_coding
description:
  valyl-tRNA synthetase; Catalyzes the attachment of valine to tRNA(Val). As ValRS can inadvertently accommodate and process structurally similar amino acids such as threonine, to avoid such errors, it has a 'posttransfer' editing activity that hydrolyzes mischarged Thr-tRNA(Val) in a tRNA- dependent manner; Belongs to the class-I aminoacyl-tRNA synthetase family. ValS type 1 subfamily.


ensembl_gene_id: SAMN04488502_101887
symbol: SDL81180.1
gene_biotype: protein_coding
description:
  Methylenetetrahydrofolate reductase (NADPH); Belongs to the methylenetetrahydrofolate reductase family.


ensembl_gene_id: SAMN04488502_101889
symbol: folD
gene_biotype: protein_coding
description:
  Methylenetetrahydrofolate dehydrogenase (NADP+); Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate.


ensembl_gene_id: SAMN04488502_10189
symbol: SDL51138.1
gene_biotype: protein_coding
description:
  Beta-ketoacyl synthase, C-terminal domain; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: SAMN04488502_101892
symbol: tatC
gene_biotype: protein_coding
description:
  Sec-independent protein translocase protein TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes.


ensembl_gene_id: SAMN04488502_101894
symbol: SDL81466.1
gene_biotype: protein_coding
description:
  Lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family.


ensembl_gene_id: SAMN04488502_101895
symbol: SDL81513.1
gene_biotype: protein_coding
description:
  GntR family transcriptional regulator, transcriptional repressor for pyruvate dehydrogenase complex.


ensembl_gene_id: SAMN04488502_101905
symbol: engB
gene_biotype: protein_coding
description:
  GTP-binding protein; Necessary for normal cell division and for the maintenance of normal septation; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. EngB GTPase family.


ensembl_gene_id: SAMN04488502_101906
symbol: lon
gene_biotype: protein_coding
description:
  ATP-dependent proteinase. Serine peptidase. MEROPS family S16; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner.


ensembl_gene_id: SAMN04488502_101910
symbol: clpX
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpX; ATP-dependent specificity component of the Clp protease. It directs the protease to specific substrates. Can perform chaperone functions in the absence of ClpP.


ensembl_gene_id: SAMN04488502_101911
symbol: clpP
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease, protease subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family.


ensembl_gene_id: SAMN04488502_101912
symbol: tig
gene_biotype: protein_coding
description:
  Trigger factor; Involved in protein export. Acts as a chaperone by maintaining the newly synthesized protein in an open conformation. Functions as a peptidyl-prolyl cis-trans isomerase; Belongs to the FKBP-type PPIase family. Tig subfamily.


ensembl_gene_id: SAMN04488502_101917
symbol: SDL82326.1
gene_biotype: protein_coding
description:
  Zinc transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 9 family.


ensembl_gene_id: SAMN04488502_10193
symbol: ruvC
gene_biotype: protein_coding
description:
  Holliday junction endonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group.


ensembl_gene_id: SAMN04488502_10194
symbol: ruvA
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB.


ensembl_gene_id: SAMN04488502_101946
symbol: SDL83331.1
gene_biotype: protein_coding
description:
  Starch phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.


ensembl_gene_id: SAMN04488502_10195
symbol: ruvB
gene_biotype: protein_coding
description:
  Holliday junction DNA helicase subunit RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing.


ensembl_gene_id: SAMN04488502_10196
symbol: queH
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr).


ensembl_gene_id: SAMN04488502_101967
symbol: crcB
gene_biotype: protein_coding
description:
  CrcB protein; Important for reducing fluoride concentration in the cell, thus reducing its toxicity; Belongs to the CrcB (TC 9.B.71) family.


ensembl_gene_id: SAMN04488502_101971
symbol: SDL84277.1
gene_biotype: protein_coding
description:
  malonyl-ACP decarboxylase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.


ensembl_gene_id: SAMN04488502_101980
symbol: SDL84603.1
gene_biotype: protein_coding
description:
  Polyketide biosynthesis enoyl-CoA hydratase PksI; Belongs to the enoyl-CoA hydratase/isomerase family.


ensembl_gene_id: SAMN04488502_10199
symbol: queA
gene_biotype: protein_coding
description:
  S-adenosylmethionine:tRNA ribosyltransferase-isomerase; Transfers and isomerizes the ribose moiety from AdoMet to the 7-aminomethyl group of 7-deazaguanine (preQ1-tRNA) to give epoxyqueuosine (oQ-tRNA).


ensembl_gene_id: SAMN04488502_102103
symbol: SDM08073.1
gene_biotype: protein_coding
description:
  D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.


ensembl_gene_id: SAMN04488502_102108
symbol: serC
gene_biotype: protein_coding
description:
  Phosphoserine aminotransferase apoenzyme; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine.


ensembl_gene_id: SAMN04488502_102117
symbol: serS
gene_biotype: protein_coding
description:
  seryl-tRNA synthetase; Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L- seryl-tRNA(Sec), which will be further converted into selenocysteinyl- tRNA(Sec).


ensembl_gene_id: SAMN04488502_102119
symbol: nuoA
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: SAMN04488502_102120
symbol: nuoB
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit B; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN04488502_102121
symbol: SDM08620.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: SAMN04488502_102122
symbol: nuoD
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: SAMN04488502_102123
symbol: nuoH
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: SAMN04488502_102125
symbol: SDM08751.1
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit J; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient.


ensembl_gene_id: SAMN04488502_102126
symbol: nuoK
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit K; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 4L family.


ensembl_gene_id: SAMN04488502_102129
symbol: nuoN
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit N; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 2 family.


ensembl_gene_id: SAMN04488502_102133
symbol: SDM09014.1
gene_biotype: protein_coding
description:
  Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family.


ensembl_gene_id: SAMN04488502_102136
symbol: SDM09114.1
gene_biotype: protein_coding
description:
  Hydrophobe/amphiphile efflux-1 (HAE1) family protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN04488502_102137
symbol: SDM09136.1
gene_biotype: protein_coding
description:
  Membrane fusion protein, multidrug efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN04488502_10215
symbol: pdxS
gene_biotype: protein_coding
description:
  Pyridoxal phosphate synthase yaaD subunit; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family.


ensembl_gene_id: SAMN04488502_102156
symbol: bioB
gene_biotype: protein_coding
description:
  Biotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family.


ensembl_gene_id: SAMN04488502_10216
symbol: pdxT
gene_biotype: protein_coding
description:
  Pyridoxal phosphate synthase yaaE subunit; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS.


ensembl_gene_id: SAMN04488502_102179
symbol: SDM10518.1
gene_biotype: protein_coding
description:
  Amino acid ABC transporter substrate-binding protein, PAAT family; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: SAMN04488502_102208
symbol: SDM11440.1
gene_biotype: protein_coding
description:
  Indolepyruvate ferredoxin oxidoreductase alpha subunit; Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates.


ensembl_gene_id: SAMN04488502_102212
symbol: SDM11574.1
gene_biotype: protein_coding
description:
  HDIG domain-containing protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.


ensembl_gene_id: SAMN04488502_102218
symbol: SDM11768.1
gene_biotype: protein_coding
description:
  Two-component response regulator, YesN/AraC family, consists of REC and AraC-type DNA-binding domains.


ensembl_gene_id: SAMN04488502_102219
symbol: SDM11799.1
gene_biotype: protein_coding
description:
  MFS transporter, SP family, major inositol transporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: SAMN04488502_102234
symbol: tmk
gene_biotype: protein_coding
description:
  dTMP kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.


ensembl_gene_id: SAMN04488502_102239
symbol: rsmI
gene_biotype: protein_coding
description:
  16S rRNA (cytidine1402-2'-O)-methyltransferase; Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA.


ensembl_gene_id: SAMN04488502_102241
symbol: metG
gene_biotype: protein_coding
description:
  methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.


ensembl_gene_id: SAMN04488502_102244
symbol: rnmV
gene_biotype: protein_coding
description:
  Ribonuclease M5; Required for correct processing of both the 5' and 3' ends of 5S rRNA precursor. Cleaves both sides of a double-stranded region yielding mature 5S rRNA in one step.


ensembl_gene_id: SAMN04488502_102245
symbol: rsmA
gene_biotype: protein_coding
description:
  16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3'-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits.


ensembl_gene_id: SAMN04488502_10225
symbol: xpt
gene_biotype: protein_coding
description:
  Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis.


ensembl_gene_id: SAMN04488502_102257
symbol: ispE
gene_biotype: protein_coding
description:
  4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol.


ensembl_gene_id: SAMN04488502_10226
symbol: SDM05391.1
gene_biotype: protein_coding
description:
  Hybrid cluster protein-associated redox disulfide domain-containing protein; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: SAMN04488502_102264
symbol: SDM13242.1
gene_biotype: protein_coding
description:
  Threonine dehydratase; Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short-lived. The second step is the nonenzymatic hydrolysis of the enamine/imine intermediates to form 2- ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA.


ensembl_gene_id: SAMN04488502_102265
symbol: glmU
gene_biotype: protein_coding
description:
  Glucosamine-1-phosphate N-acetyltransferase; Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP-GlcNAc). The C- terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N- acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5-monophosphate (from uridine 5- triphosphate), a reaction catalyzed by the N-terminal domain.


ensembl_gene_id: SAMN04488502_102266
symbol: prs
gene_biotype: protein_coding
description:
  Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.


ensembl_gene_id: SAMN04488502_102269
symbol: pth
gene_biotype: protein_coding
description:
  peptidyl-tRNA hydrolase, PTH1 family; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.


ensembl_gene_id: SAMN04488502_102275
symbol: prfA
gene_biotype: protein_coding
description:
  Bacterial peptide chain release factor 1 (bRF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA.


ensembl_gene_id: SAMN04488502_102276
symbol: prmC
gene_biotype: protein_coding
description:
  Release factor glutamine methyltransferase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily.


ensembl_gene_id: SAMN04488502_102277
symbol: SDM13729.1
gene_biotype: protein_coding
description:
  Translation factor SUA5; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine.


ensembl_gene_id: SAMN04488502_102279
symbol: SDM13804.1
gene_biotype: protein_coding
description:
  Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: SAMN04488502_102282
symbol: glyA
gene_biotype: protein_coding
description:
  Glycine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.


ensembl_gene_id: SAMN04488502_102283
symbol: upp
gene_biotype: protein_coding
description:
  Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha-D- ribose 1-diphosphate (PRPP) to UMP and diphosphate.


ensembl_gene_id: SAMN04488502_102284
symbol: queF
gene_biotype: protein_coding
description:
  7-cyano-7-deazaguanine reductase; Catalyzes the NADPH-dependent reduction of 7-cyano-7- deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1). Belongs to the GTP cyclohydrolase I family. QueF type 1 subfamily.


ensembl_gene_id: SAMN04488502_102285
symbol: SDM14015.1
gene_biotype: protein_coding
description:
  methylated-DNA-[protein]-cysteine S-methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated.


ensembl_gene_id: SAMN04488502_10231
symbol: SDM05577.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.


ensembl_gene_id: SAMN04488502_10235
symbol: glgC
gene_biotype: protein_coding
description:
  Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.


ensembl_gene_id: SAMN04488502_102373
symbol: SDM16652.1
gene_biotype: protein_coding
description:
  Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein.


ensembl_gene_id: SAMN04488502_102381
symbol: SDM16952.1
gene_biotype: protein_coding
description:
  UDP-N-acetylglucosamine 2-epimerase (non-hydrolysing); Belongs to the UDP-N-acetylglucosamine 2-epimerase family.


ensembl_gene_id: SAMN04488502_102384
symbol: atpB
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit a; Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. Belongs to the ATPase A chain family.


ensembl_gene_id: SAMN04488502_102385
symbol: atpE
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit c; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN04488502_102386
symbol: atpF
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit b; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0); Belongs to the ATPase B chain family.


ensembl_gene_id: SAMN04488502_102387
symbol: atpH
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.


ensembl_gene_id: SAMN04488502_102388
symbol: atpA
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit alpha; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit.


ensembl_gene_id: SAMN04488502_102389
symbol: atpG
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit gamma; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.


ensembl_gene_id: SAMN04488502_102390
symbol: atpD
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits.


ensembl_gene_id: SAMN04488502_102391
symbol: atpC
gene_biotype: protein_coding
description:
  F-type H+-transporting ATPase subunit epsilon; Produces ATP from ADP in the presence of a proton gradient across the membrane.


ensembl_gene_id: SAMN04488502_102404
symbol: SDM17681.1
gene_biotype: protein_coding
description:
  Flagellar L-ring protein precursor FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: SAMN04488502_102405
symbol: flgI
gene_biotype: protein_coding
description:
  Flagellar P-ring protein precursor FlgI; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.


ensembl_gene_id: SAMN04488502_102410
symbol: SDM17865.1
gene_biotype: protein_coding
description:
  phospholipid/cholesterol/gamma-HCH transport system permease protein; Belongs to the MlaE permease family.


ensembl_gene_id: SAMN04488502_10242
symbol: thiC
gene_biotype: protein_coding
description:
  Hydroxymethylpyrimidine synthase; Catalyzes the synthesis of the hydroxymethylpyrimidine phosphate (HMP-P) moiety of thiamine from aminoimidazole ribotide (AIR) in a radical S-adenosyl-L-methionine (SAM)-dependent reaction. Belongs to the ThiC family.


ensembl_gene_id: SAMN04488502_102422
symbol: lpxD
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3- hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell. Belongs to the transferase hexapeptide repeat family. LpxD subfamily.


ensembl_gene_id: SAMN04488502_10247
symbol: glgB
gene_biotype: protein_coding
description:
  1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.


ensembl_gene_id: SAMN04488502_1031
symbol: SDM22856.1
gene_biotype: protein_coding
description:
  Diamine aminotransferase apoenzyme; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN04488502_103107
symbol: SDM26824.1
gene_biotype: protein_coding
description:
  Multidrug efflux pump subunit AcrB; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN04488502_103108
symbol: SDM26854.1
gene_biotype: protein_coding
description:
  RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN04488502_103113
symbol: iolG
gene_biotype: protein_coding
description:
  Myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase; Involved in the oxidation of myo-inositol (MI) and D-chiro- inositol (DCI) to 2-keto-myo-inositol (2KMI or 2-inosose) and 1-keto-D- chiro-inositol (1KDCI), respectively.


ensembl_gene_id: SAMN04488502_103116
symbol: SDM27102.1
gene_biotype: protein_coding
description:
  Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the PNP/UDP phosphorylase family.


ensembl_gene_id: SAMN04488502_103130
symbol: SDM27627.1
gene_biotype: protein_coding
description:
  Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.


ensembl_gene_id: SAMN04488502_103136
symbol: panB
gene_biotype: protein_coding
description:
  Ketopantoate hydroxymethyltransferase; Catalyzes the reversible reaction in which hydroxymethyl group from 5,10-methylenetetrahydrofolate is transferred onto alpha- ketoisovalerate to form ketopantoate; Belongs to the PanB family.


ensembl_gene_id: SAMN04488502_103137
symbol: SDM27841.1
gene_biotype: protein_coding
description:
  2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid.


ensembl_gene_id: SAMN04488502_103140
symbol: SDM27948.1
gene_biotype: protein_coding
description:
  tRNA (cytidine/uridine-2'-O-)-methyltransferase; Could methylate the ribose at the nucleotide 34 wobble position in tRNA; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family. TrmL subfamily.


ensembl_gene_id: SAMN04488502_103145
symbol: SDM28121.1
gene_biotype: protein_coding
description:
  Ribonucleoside-diphosphate reductase class II; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen.


ensembl_gene_id: SAMN04488502_103153
symbol: nifH
gene_biotype: protein_coding
description:
  Nitrogenase iron protein NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.


ensembl_gene_id: SAMN04488502_103208
symbol: SDM30464.1
gene_biotype: protein_coding
description:
  [methyl-Co(III) methanol-specific corrinoid protein]:coenzyme M methyltransferase; Belongs to the uroporphyrinogen decarboxylase family.


ensembl_gene_id: SAMN04488502_103215
symbol: SDM30720.1
gene_biotype: protein_coding
description:
  4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN04488502_10323
symbol: SDM23758.1
gene_biotype: protein_coding
description:
  Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: SAMN04488502_1035
symbol: potA
gene_biotype: protein_coding
description:
  Spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Spermidine/putrescine importer (TC 3.A.1.11.1) family.


ensembl_gene_id: SAMN04488502_10351
symbol: SDM24837.1
gene_biotype: protein_coding
description:
  D-alanine transaminase; Acts on the D-isomers of alanine, leucine, aspartate, glutamate, aminobutyrate, norvaline and asparagine. The enzyme transfers an amino group from a substrate D-amino acid to the pyridoxal phosphate cofactor to form pyridoxamine and an alpha-keto acid in the first half-reaction.


ensembl_gene_id: SAMN04488502_10356
symbol: nth
gene_biotype: protein_coding
description:
  DNA-(apurinic or apyrimidinic site) lyase; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.


ensembl_gene_id: SAMN04488502_104104
symbol: iolE
gene_biotype: protein_coding
description:
  2-keto-myo-inositol dehydratase; Catalyzes the dehydration of inosose (2-keto-myo-inositol, 2KMI or 2,4,6/3,5-pentahydroxycyclohexanone) to 3D-(3,5/4)- trihydroxycyclohexane-1,2-dione (D-2,3-diketo-4-deoxy-epi-inositol).


ensembl_gene_id: SAMN04488502_104127
symbol: ldh
gene_biotype: protein_coding
description:
  L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.


ensembl_gene_id: SAMN04488502_104131
symbol: SDM39506.1
gene_biotype: protein_coding
description:
  Citrate lyase subunit gamma (acyl carrier protein); Covalent carrier of the coenzyme of citrate lyase.


ensembl_gene_id: SAMN04488502_104138
symbol: mobA
gene_biotype: protein_coding
description:
  Molybdenum cofactor guanylyltransferase; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor.


ensembl_gene_id: SAMN04488502_104151
symbol: rpsD
gene_biotype: protein_coding
description:
  SSU ribosomal protein S4P; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the body of the 30S subunit.


ensembl_gene_id: SAMN04488502_104182
symbol: pxpA
gene_biotype: protein_coding
description:
  UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.


ensembl_gene_id: SAMN04488502_104185
symbol: SDM41543.1
gene_biotype: protein_coding
description:
  Biotin carboxyl carrier protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: SAMN04488502_104188
symbol: SDM41677.1
gene_biotype: protein_coding
description:
  acetyl-CoA carboxylase, biotin carboxylase subunit; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.


ensembl_gene_id: SAMN04488502_104191
symbol: SDM41805.1
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase A (cyclophilin A); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: SAMN04488502_104194
symbol: thiM
gene_biotype: protein_coding
description:
  Hydroxyethylthiazole kinase; Catalyzes the phosphorylation of the hydroxyl group of 4- methyl-5-beta-hydroxyethylthiazole (THZ); Belongs to the Thz kinase family.


ensembl_gene_id: SAMN04488502_104200
symbol: lpxA
gene_biotype: protein_coding
description:
  acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: SAMN04488502_104218
symbol: SDM42880.1
gene_biotype: protein_coding
description:
  DNA-(apurinic or apyrimidinic site) lyase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates.


ensembl_gene_id: SAMN04488502_104222
symbol: topB
gene_biotype: protein_coding
description:
  DNA topoisomerase-3; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA- (5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supe [...]


ensembl_gene_id: SAMN04488502_104223
symbol: SDM43084.1
gene_biotype: protein_coding
description:
  Bifunctional enzyme CysN/CysC; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.


ensembl_gene_id: SAMN04488502_104241
symbol: cysA
gene_biotype: protein_coding
description:
  Sulfate transport system ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system.


ensembl_gene_id: SAMN04488502_104243
symbol: SDM43786.1
gene_biotype: protein_coding
description:
  Sulfate transport system permease protein; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import.


ensembl_gene_id: SAMN04488502_104245
symbol: ribB
gene_biotype: protein_coding
description:
  3,4-dihydroxy 2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate.


ensembl_gene_id: SAMN04488502_104248
symbol: zwf
gene_biotype: protein_coding
description:
  Glucose-6-phosphate 1-dehydrogenase; Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone.


ensembl_gene_id: SAMN04488502_10445
symbol: metAA
gene_biotype: protein_coding
description:
  Homoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family.


ensembl_gene_id: SAMN04488502_1045
symbol: gmd
gene_biotype: protein_coding
description:
  GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.


ensembl_gene_id: SAMN04488502_10456
symbol: SDM36456.1
gene_biotype: protein_coding
description:
  L-alanine-DL-glutamate epimerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.


ensembl_gene_id: SAMN04488502_10459
symbol: potA-2
gene_biotype: protein_coding
description:
  Putative spermidine/putrescine transport system ATP-binding protein; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.


ensembl_gene_id: SAMN04488502_10471
symbol: SDM37103.1
gene_biotype: protein_coding
description:
  Predicted protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.


ensembl_gene_id: SAMN04488502_10497
symbol: iolC
gene_biotype: protein_coding
description:
  5-dehydro-2-deoxygluconokinase; Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5-dehydro-2- deoxy-D-gluconate (DKGP).


ensembl_gene_id: SAMN04488502_10511
symbol: SDM48327.1
gene_biotype: protein_coding
description:
  Proton glutamate symport protein; Belongs to the dicarboxylate/amino acid:cation symporter (DAACS) (TC 2.A.23) family.


ensembl_gene_id: SAMN04488502_105134
symbol: SDM52785.1
gene_biotype: protein_coding
description:
  Cobalt/nickel transport system ATP-binding protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.


ensembl_gene_id: SAMN04488502_10517
symbol: hemA
gene_biotype: protein_coding
description:
  glutamyl-tRNA reductase; Catalyzes the NADPH-dependent reduction of glutamyl-tRNA(Glu) to glutamate 1-semialdehyde (GSA).


ensembl_gene_id: SAMN04488502_10518
symbol: hemC
gene_biotype: protein_coding
description:
  Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family.


ensembl_gene_id: SAMN04488502_105198
symbol: cas2
gene_biotype: protein_coding
description:
  CRISPR-associated protein, Cas2 family; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.


ensembl_gene_id: SAMN04488502_105231
symbol: msrA
gene_biotype: protein_coding
description:
  Peptide methionine sulfoxide reductase msrA/msrB; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine.


ensembl_gene_id: SAMN04488502_105234
symbol: nifH-3
gene_biotype: protein_coding
description:
  Mo-nitrogenase iron protein subunit NifH; The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex, which has 2 components: the iron protein and the molybdenum-iron protein; Belongs to the NifH/BchL/ChlL family.


ensembl_gene_id: SAMN04488502_105238
symbol: SDM56543.1
gene_biotype: protein_coding
description:
  Mo-nitrogenase MoFe protein subunit NifK; This molybdenum-iron protein is part of the nitrogenase complex that catalyzes the key enzymatic reactions in nitrogen fixation; Belongs to the NifD/NifK/NifE/NifN family.


ensembl_gene_id: SAMN04488502_10537
symbol: deoC
gene_biotype: protein_coding
description:
  Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily.


ensembl_gene_id: SAMN04488502_10543
symbol: rlmH
gene_biotype: protein_coding
description:
  23S rRNA (pseudouridine1915-N3)-methyltransferase; Specifically methylates the pseudouridine at position 1915 (m3Psi1915) in 23S rRNA; Belongs to the RNA methyltransferase RlmH family.


ensembl_gene_id: SAMN04488502_10573
symbol: SDM50620.1
gene_biotype: protein_coding
description:
  Putative ABC transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN04488502_10576
symbol: SDM50719.1
gene_biotype: protein_coding
description:
  Peroxiredoxin (alkyl hydroperoxide reductase subunit C); Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides; Belongs to the peroxiredoxin family. AhpC/Prx1 subfamily.


ensembl_gene_id: SAMN04488502_10595
symbol: SDM51406.1
gene_biotype: protein_coding
description:
  Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family.


ensembl_gene_id: SAMN04488502_106105
symbol: SDM64831.1
gene_biotype: protein_coding
description:
  Phosphate ABC transporter membrane protein 1, PhoT family; Part of the binding-protein-dependent transport system for phosphate; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.


ensembl_gene_id: SAMN04488502_106126
symbol: tilS
gene_biotype: protein_coding
description:
  tRNA(Ile)-lysidine synthase; Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU, in an ATP-dependent manner. Cytidine is converted to lysidine, thus changing the amino acid specificity of the tRNA from methionine to isoleucine. Belongs to the tRNA(Ile)-lysidine synthase family.


ensembl_gene_id: SAMN04488502_106127
symbol: SDM65636.1
gene_biotype: protein_coding
description:
  Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.


ensembl_gene_id: SAMN04488502_106128
symbol: ftsH
gene_biotype: protein_coding
description:
  Cell division protease FtsH; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family.  In the central section; belongs to the AAA ATPase family.


ensembl_gene_id: SAMN04488502_106130
symbol: panC
gene_biotype: protein_coding
description:
  Pantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.


ensembl_gene_id: SAMN04488502_106131
symbol: panD
gene_biotype: protein_coding
description:
  L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.


ensembl_gene_id: SAMN04488502_106132
symbol: birA
gene_biotype: protein_coding
description:
  Bifunctional ligase/repressor BirA; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.


ensembl_gene_id: SAMN04488502_106133
symbol: coaX
gene_biotype: protein_coding
description:
  Type III pantothenate kinase; Catalyzes the phosphorylation of pantothenate (Pan), the first step in CoA biosynthesis.


ensembl_gene_id: SAMN04488502_106134
symbol: SDM65877.1
gene_biotype: protein_coding
description:
  Putative TIM-barrel protein, nifR3 family; Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines; Belongs to the dus family.


ensembl_gene_id: SAMN04488502_106138
symbol: greA
gene_biotype: protein_coding
description:
  Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.


ensembl_gene_id: SAMN04488502_106141
symbol: speH
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily.


ensembl_gene_id: SAMN04488502_106145
symbol: mcsB
gene_biotype: protein_coding
description:
  Protein arginine kinase; Catalyzes the specific phosphorylation of arginine residues in proteins; Belongs to the ATP:guanido phosphotransferase family.


ensembl_gene_id: SAMN04488502_106147
symbol: radA
gene_biotype: protein_coding
description:
  DNA repair protein RadA/Sms; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function.


ensembl_gene_id: SAMN04488502_106154
symbol: ispDF
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Bifunctional enzyme that catalyzes the formation of 4- diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D- erythritol 4-phosphate (MEP) (IspD), and catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C- methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (IspF).


ensembl_gene_id: SAMN04488502_106156
symbol: gltX
gene_biotype: protein_coding
description:
  Nondiscriminating glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two- step reaction: glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu); Belongs to the class-I aminoacyl-tRNA synthetase family. Glutamate--tRNA ligase type 1 subfamily.


ensembl_gene_id: SAMN04488502_106159
symbol: mrnC
gene_biotype: protein_coding
description:
  Ribonuclease-3 family protein; Involved in correct processing of both the 5' and 3' ends of 23S rRNA precursor. Processes 30S rRNA precursor transcript even in absence of ribonuclease 3 (Rnc); Rnc processes 30S rRNA into smaller rRNA precursors; Belongs to the MrnC RNase family.


ensembl_gene_id: SAMN04488502_106160
symbol: thyX
gene_biotype: protein_coding
description:
  Thymidylate synthase (FAD); Catalyzes the reductive methylation of 2'-deoxyuridine-5'- monophosphate (dUMP) to 2'-deoxythymidine-5'-monophosphate (dTMP) while utilizing 5,10-methylenetetrahydrofolate (mTHF) as the methyl donor, and NADPH and FADH(2) as the reductant.


ensembl_gene_id: SAMN04488502_106161
symbol: SDM66880.1
gene_biotype: protein_coding
description:
  23S rRNA (guanosine2251-2'-O)-methyltransferase; Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family.


ensembl_gene_id: SAMN04488502_106165
symbol: pfkA-2
gene_biotype: protein_coding
description:
  6-phosphofructokinase 1; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily.


ensembl_gene_id: SAMN04488502_106166
symbol: uppP
gene_biotype: protein_coding
description:
  Undecaprenyl-diphosphatase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.


ensembl_gene_id: SAMN04488502_106175
symbol: nusG
gene_biotype: protein_coding
description:
  Transcription antitermination protein nusG; Participates in transcription elongation, termination and antitermination.


ensembl_gene_id: SAMN04488502_106176
symbol: rplK
gene_biotype: protein_coding
description:
  LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.


ensembl_gene_id: SAMN04488502_106177
symbol: rplA
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L1; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release.


ensembl_gene_id: SAMN04488502_106178
symbol: rplJ
gene_biotype: protein_coding
description:
  LSU ribosomal protein L10P; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors. Belongs to the universal ribosomal protein uL10 family.


ensembl_gene_id: SAMN04488502_106179
symbol: rplL
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.


ensembl_gene_id: SAMN04488502_106180
symbol: rpoB
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN04488502_106183
symbol: rpsL
gene_biotype: protein_coding
description:
  SSU ribosomal protein S12P; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.


ensembl_gene_id: SAMN04488502_106184
symbol: rpsG
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.


ensembl_gene_id: SAMN04488502_106185
symbol: fusA
gene_biotype: protein_coding
description:
  Translation elongation factor 2 (EF-2/EF-G); Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. [...]


ensembl_gene_id: SAMN04488502_106186
symbol: tuf
gene_biotype: protein_coding
description:
  Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.


ensembl_gene_id: SAMN04488502_106187
symbol: rpsJ
gene_biotype: protein_coding
description:
  SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.


ensembl_gene_id: SAMN04488502_106188
symbol: rplC
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.


ensembl_gene_id: SAMN04488502_106190
symbol: rplW
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L23; One of the early assembly proteins it binds 23S rRNA. One of the proteins that surrounds the polypeptide exit tunnel on the outside of the ribosome. Forms the main docking site for trigger factor binding to the ribosome; Belongs to the universal ribosomal protein uL23 family.


ensembl_gene_id: SAMN04488502_106191
symbol: rplB
gene_biotype: protein_coding
description:
  LSU ribosomal protein L2P; One of the primary rRNA binding proteins. Required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation. It has been suggested to have peptidyltransferase activity; this is somewhat controversial. Makes several contacts with the 16S rRNA in the 70S ribosome. Belongs to the universal ribosomal protein uL2 family.


ensembl_gene_id: SAMN04488502_106192
symbol: rpsS
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S19; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA.


ensembl_gene_id: SAMN04488502_106193
symbol: rplV
gene_biotype: protein_coding
description:
  LSU ribosomal protein L22P; The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome.


ensembl_gene_id: SAMN04488502_106194
symbol: rpsC
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S3; Binds the lower part of the 30S subunit head. Binds mRNA in the 70S ribosome, positioning it for translation; Belongs to the universal ribosomal protein uS3 family.


ensembl_gene_id: SAMN04488502_106195
symbol: rplP
gene_biotype: protein_coding
description:
  LSU ribosomal protein L16P; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family.


ensembl_gene_id: SAMN04488502_106197
symbol: rpsQ
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S17; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA.


ensembl_gene_id: SAMN04488502_106198
symbol: rplN
gene_biotype: protein_coding
description:
  LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family.


ensembl_gene_id: SAMN04488502_106199
symbol: rplX
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.


ensembl_gene_id: SAMN04488502_106200
symbol: rplE
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L5; This is 1 of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance. In the 70S ribosome it contacts protein S13 of the 30S subunit (bridge B1b), connecting the 2 subunits; this bridge is implicated in subunit movement. Contacts the P site tRNA; the 5S rRNA and some of its associated proteins might help stabilize positioning of ribosome-bound tRNAs.


ensembl_gene_id: SAMN04488502_106201
symbol: rpsZ
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S14; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.


ensembl_gene_id: SAMN04488502_106202
symbol: rpsH
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S8; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; Belongs to the universal ribosomal protein uS8 family.


ensembl_gene_id: SAMN04488502_106203
symbol: rplF
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.


ensembl_gene_id: SAMN04488502_106204
symbol: rplR
gene_biotype: protein_coding
description:
  Large subunit ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance.


ensembl_gene_id: SAMN04488502_106205
symbol: rpsE
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S5; Located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body. Belongs to the universal ribosomal protein uS5 family.


ensembl_gene_id: SAMN04488502_106207
symbol: rplO
gene_biotype: protein_coding
description:
  LSU ribosomal protein L15P; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.


ensembl_gene_id: SAMN04488502_106208
symbol: secY
gene_biotype: protein_coding
description:
  Protein translocase subunit secY/sec61 alpha; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently.


ensembl_gene_id: SAMN04488502_106209
symbol: adk
gene_biotype: protein_coding
description:
  Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family.


ensembl_gene_id: SAMN04488502_106210
symbol: map
gene_biotype: protein_coding
description:
  Methionine aminopeptidase, type I; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed; Belongs to the peptidase M24A family. Methionine aminopeptidase type 1 subfamily.


ensembl_gene_id: SAMN04488502_106212
symbol: infA
gene_biotype: protein_coding
description:
  Translation initiation factor IF-1; One of the essential components for the initiation of protein synthesis. Stabilizes the binding of IF-2 and IF-3 on the 30S subunit to which N-formylmethionyl-tRNA(fMet) subsequently binds. Helps modulate mRNA selection, yielding the 30S pre-initiation complex (PIC). Upon addition of the 50S ribosomal subunit IF-1, IF-2 and IF-3 are released leaving the mature 70S translation initiation complex.


ensembl_gene_id: SAMN04488502_106213
symbol: rpsM
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S13; Located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA. In the 70S ribosome it contacts the 23S rRNA (bridge B1a) and protein L5 of the 50S subunit (bridge B1b), connecting the 2 subunits; these bridges are implicated in subunit movement. Contacts the tRNAs in the A and P-sites. Belongs to the universal ribosomal protein uS13 family.


ensembl_gene_id: SAMN04488502_106214
symbol: rpsK
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S11; Located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA. Forms part of the Shine- Dalgarno cleft in the 70S ribosome; Belongs to the universal ribosomal protein uS11 family.


ensembl_gene_id: SAMN04488502_106216
symbol: rpoA
gene_biotype: protein_coding
description:
  DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.


ensembl_gene_id: SAMN04488502_106218
symbol: ecfA
gene_biotype: protein_coding
description:
  Energy-coupling factor transport system ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: SAMN04488502_106220
symbol: ecfT
gene_biotype: protein_coding
description:
  Energy-coupling factor transport system permease protein; Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.


ensembl_gene_id: SAMN04488502_106221
symbol: truA
gene_biotype: protein_coding
description:
  tRNA pseudouridine38-40 synthase; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.


ensembl_gene_id: SAMN04488502_106222
symbol: rplM
gene_biotype: protein_coding
description:
  LSU ribosomal protein L13P; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.


ensembl_gene_id: SAMN04488502_106233
symbol: argC
gene_biotype: protein_coding
description:
  N-acetyl-gamma-glutamyl-phosphate reductase; Catalyzes the NADPH-dependent reduction of N-acetyl-5- glutamyl phosphate to yield N-acetyl-L-glutamate 5-semialdehyde. Belongs to the NAGSA dehydrogenase family. Type 1 subfamily.


ensembl_gene_id: SAMN04488502_106234
symbol: argJ
gene_biotype: protein_coding
description:
  Glutamate N-acetyltransferase; Catalyzes two activities which are involved in the cyclic version of arginine biosynthesis: the synthesis of N-acetylglutamate from glutamate and acetyl-CoA as the acetyl donor, and of ornithine by transacetylation between N(2)-acetylornithine and glutamate. Belongs to the ArgJ family.


ensembl_gene_id: SAMN04488502_106235
symbol: argB
gene_biotype: protein_coding
description:
  N-acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily.


ensembl_gene_id: SAMN04488502_106236
symbol: argD
gene_biotype: protein_coding
description:
  acetylornithine/N-succinyldiaminopimelate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. ArgD subfamily.


ensembl_gene_id: SAMN04488502_106237
symbol: SDM69544.1
gene_biotype: protein_coding
description:
  Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline.


ensembl_gene_id: SAMN04488502_106244
symbol: dacA
gene_biotype: protein_coding
description:
  Diadenylate cyclase; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.


ensembl_gene_id: SAMN04488502_106247
symbol: glmM
gene_biotype: protein_coding
description:
  Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.


ensembl_gene_id: SAMN04488502_106249
symbol: glmS
gene_biotype: protein_coding
description:
  Glucosamine--fructose-6-phosphate aminotransferase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.


ensembl_gene_id: SAMN04488502_10648
symbol: SDM62884.1
gene_biotype: protein_coding
description:
  Superoxide dismutase, Cu-Zn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family.


ensembl_gene_id: SAMN04488502_10651
symbol: ppnP
gene_biotype: protein_coding
description:
  Hypothetical protein; Catalyzes the phosphorolysis of diverse nucleosides, yielding D-ribose 1-phosphate and the respective free bases. Can use uridine, adenosine, guanosine, cytidine, thymidine, inosine and xanthosine as substrates. Also catalyzes the reverse reactions.


ensembl_gene_id: SAMN04488502_10658
symbol: speD
gene_biotype: protein_coding
description:
  S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 2 subfamily.


ensembl_gene_id: SAMN04488502_10661
symbol: SDM63289.1
gene_biotype: protein_coding
description:
  neurotransmitter:Na+ symporter, NSS family; Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family.


ensembl_gene_id: SAMN04488502_10670
symbol: pyrG
gene_biotype: protein_coding
description:
  CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen. Regulates intracellular CTP levels through interactions with the four ribonucleotide triphosphates.


ensembl_gene_id: SAMN04488502_10675
symbol: tal
gene_biotype: protein_coding
description:
  Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the transaldolase family. Type 3B subfamily.


ensembl_gene_id: SAMN04488502_10688
symbol: mfd
gene_biotype: protein_coding
description:
  Transcription-repair coupling factor (superfamily II helicase); Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily.


ensembl_gene_id: SAMN04488502_10692
symbol: SDM64342.1
gene_biotype: protein_coding
description:
  DNA-binding protein HU-beta; Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions.


ensembl_gene_id: SAMN04488502_10697
symbol: pstB
gene_biotype: protein_coding
description:
  Phosphate ABC transporter ATP-binding protein, PhoT family; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.


ensembl_gene_id: SAMN04488502_107111
symbol: nuoA-2
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit A; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I subunit 3 family.


ensembl_gene_id: SAMN04488502_107113
symbol: SDM79119.1
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit C; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Belongs to the complex I 30 kDa subunit family.


ensembl_gene_id: SAMN04488502_107114
symbol: nuoD-2
gene_biotype: protein_coding
description:
  NADH-quinone oxidoreductase subunit D; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be a menaquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 49 kDa subunit family.


ensembl_gene_id: SAMN04488502_107115
symbol: nuoH-2
gene_biotype: protein_coding
description:
  NADH dehydrogenase subunit H; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone.


ensembl_gene_id: SAMN04488502_107124
symbol: SDM79622.1
gene_biotype: protein_coding
description:
  PTS system D-fructose-specific IIB component (F1P-forming), Frc family /PTS system D-fructose-specific IIC component (F1P-forming), Frc family.


ensembl_gene_id: SAMN04488502_107127
symbol: SDM79748.1
gene_biotype: protein_coding
description:
  Phosphotransferase system, enzyme I, PtsI; General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr).


ensembl_gene_id: SAMN04488502_107129
symbol: SDM79833.1
gene_biotype: protein_coding
description:
  Membrane fusion protein, macrolide-specific efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN04488502_107130
symbol: macB
gene_biotype: protein_coding
description:
  Putative ABC transport system ATP-binding protein; Non-canonical ABC transporter that contains transmembrane domains (TMD), which form a pore in the membrane, and an ATP-binding domain (NBD), which is responsible for energy generation. Confers resistance against macrolides.


ensembl_gene_id: SAMN04488502_10741
symbol: SDM75718.1
gene_biotype: protein_coding
description:
  Flagellar hook-associated protein 2; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end.


ensembl_gene_id: SAMN04488502_10750
symbol: clpB
gene_biotype: protein_coding
description:
  ATP-dependent Clp protease ATP-binding subunit ClpB; Part of a stress-induced multi-chaperone system, it is involved in the recovery of the cell from heat-induced damage, in cooperation with DnaK, DnaJ and GrpE; Belongs to the ClpA/ClpB family.


ensembl_gene_id: SAMN04488502_10763
symbol: SDM76756.1
gene_biotype: protein_coding
description:
  Tryptophan synthase beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine.


ensembl_gene_id: SAMN04488502_10771
symbol: trpD
gene_biotype: protein_coding
description:
  Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA).


ensembl_gene_id: SAMN04488502_10775
symbol: trpA
gene_biotype: protein_coding
description:
  Tryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family.


ensembl_gene_id: SAMN04488502_10778
symbol: prfC
gene_biotype: protein_coding
description:
  Peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily.


ensembl_gene_id: SAMN04488502_1078
symbol: ddl-2
gene_biotype: protein_coding
description:
  D-alanine--D-alanine ligase; Cell wall formation; Belongs to the D-alanine--D-alanine ligase family.


ensembl_gene_id: SAMN04488502_10783
symbol: SDM77749.1
gene_biotype: protein_coding
description:
  LL-diaminopimelate aminotransferase apoenzyme; Involved in the synthesis of meso-diaminopimelate (m-DAP or DL-DAP), required for both lysine and peptidoglycan biosynthesis. Catalyzes the direct conversion of tetrahydrodipicolinate to LL- diaminopimelate; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family. LL-diaminopimelate aminotransferase subfamily.


ensembl_gene_id: SAMN04488502_108118
symbol: SDM89147.1
gene_biotype: protein_coding
description:
  Polar amino acid transport system substrate-binding protein; Belongs to the bacterial solute-binding protein 3 family.


ensembl_gene_id: SAMN04488502_108122
symbol: hpf
gene_biotype: protein_coding
description:
  Putative sigma-54 modulation protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.


ensembl_gene_id: SAMN04488502_108127
symbol: secA
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecA; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. Has a central role in coupling the hydrolysis of ATP to the transfer of proteins into and across the cell membrane, serving as an ATP-driven molecular motor driving the stepwise translocation of polypeptide chains across the membrane; Belongs to the SecA family.


ensembl_gene_id: SAMN04488502_108128
symbol: prfB
gene_biotype: protein_coding
description:
  Peptide chain release factor 2; Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA.


ensembl_gene_id: SAMN04488502_108136
symbol: ftsE
gene_biotype: protein_coding
description:
  Cell division transport system ATP-binding protein; Part of the ABC transporter FtsEX involved in cellular division.


ensembl_gene_id: SAMN04488502_108137
symbol: SDM89856.1
gene_biotype: protein_coding
description:
  Cell division transport system permease protein; Part of the ABC transporter FtsEX involved in asymmetric cellular division facilitating the initiation of sporulation. Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.


ensembl_gene_id: SAMN04488502_108142
symbol: uvrB
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate  [...]


ensembl_gene_id: SAMN04488502_108143
symbol: uvrA
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.


ensembl_gene_id: SAMN04488502_1082
symbol: lpxC
gene_biotype: protein_coding
description:
  UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; Catalyzes the hydrolysis of UDP-3-O-myristoyl-N- acetylglucosamine to form UDP-3-O-myristoylglucosamine and acetate, the committed step in lipid A biosynthesis; Belongs to the LpxC family.


ensembl_gene_id: SAMN04488502_10821
symbol: SDM85373.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be a nuclease involved in processing of the 5'-end of pre-16S rRNA; Belongs to the YqgF nuclease family.


ensembl_gene_id: SAMN04488502_10829
symbol: SDM85686.1
gene_biotype: protein_coding
description:
  rfaE bifunctional protein, domain II; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose.


ensembl_gene_id: SAMN04488502_1083
symbol: fabZ
gene_biotype: protein_coding
description:
  3-hydroxyacyl-[acyl-carrier-protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs.


ensembl_gene_id: SAMN04488502_10852
symbol: SDM86607.1
gene_biotype: protein_coding
description:
  dTDP-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.


ensembl_gene_id: SAMN04488502_10853
symbol: SDM86644.1
gene_biotype: protein_coding
description:
  Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family.


ensembl_gene_id: SAMN04488502_10854
symbol: SDM86681.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family.


ensembl_gene_id: SAMN04488502_10855
symbol: SDM86716.1
gene_biotype: protein_coding
description:
  dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.


ensembl_gene_id: SAMN04488502_10858
symbol: SDM86831.1
gene_biotype: protein_coding
description:
  Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.


ensembl_gene_id: SAMN04488502_1086
symbol: lpxB
gene_biotype: protein_coding
description:
  lipid-A-disaccharide synthase; Condensation of UDP-2,3-diacylglucosamine and 2,3- diacylglucosamine-1-phosphate to form lipid A disaccharide, a precursor of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell.


ensembl_gene_id: SAMN04488502_10879
symbol: recD2
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease V alpha subunit; DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity; Belongs to the RecD family. RecD-like subfamily.


ensembl_gene_id: SAMN04488502_1088
symbol: lpxK
gene_biotype: protein_coding
description:
  lipid-A-disaccharide kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA).


ensembl_gene_id: SAMN04488502_10889
symbol: fliW
gene_biotype: protein_coding
description:
  Flagellar assembly factor FliW; Acts as an anti-CsrA protein, binds CsrA and prevents it from repressing translation of its target genes, one of which is flagellin. Binds to flagellin and participates in the assembly of the flagellum.


ensembl_gene_id: SAMN04488502_1089
symbol: kdsB
gene_biotype: protein_coding
description:
  3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase); Activates KDO (a required 8-carbon sugar) for incorporation into bacterial lipopolysaccharide in Gram-negative bacteria.


ensembl_gene_id: SAMN04488502_10890
symbol: csrA
gene_biotype: protein_coding
description:
  Carbon storage regulator, CsrA; A translational regulator that binds mRNA to regulate translation initiation and/or mRNA stability. Usually binds in the 5'- UTR at or near the Shine-Dalgarno sequence preventing ribosome-binding, thus repressing translation. Its main target seems to be the major flagellin gene, while its function is anatagonized by FliW.


ensembl_gene_id: SAMN04488502_10893
symbol: SDM88129.1
gene_biotype: protein_coding
description:
  Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.


ensembl_gene_id: SAMN04488502_10897
symbol: SDM88278.1
gene_biotype: protein_coding
description:
  UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine transaminase; Belongs to the DegT/DnrJ/EryC1 family.


ensembl_gene_id: SAMN04488502_109106
symbol: fumC
gene_biotype: protein_coding
description:
  Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.


ensembl_gene_id: SAMN04488502_109117
symbol: tadA
gene_biotype: protein_coding
description:
  tRNA(adenine34) deaminase; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.


ensembl_gene_id: SAMN04488502_109122
symbol: dnaX
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.


ensembl_gene_id: SAMN04488502_109124
symbol: recR
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.


ensembl_gene_id: SAMN04488502_10920
symbol: SDM93067.1
gene_biotype: protein_coding
description:
  MFS transporter, sugar porter (SP) family; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.


ensembl_gene_id: SAMN04488502_10965
symbol: SDM94809.1
gene_biotype: protein_coding
description:
  Membrane fusion protein, Cu(I)/Ag(I) efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.


ensembl_gene_id: SAMN04488502_10966
symbol: SDM94840.1
gene_biotype: protein_coding
description:
  Cu(I)/Ag(I) efflux system membrane protein CusA/SilA; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN04488502_110102
symbol: SDN02238.1
gene_biotype: protein_coding
description:
  Replicative DNA helicase; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity. Belongs to the helicase family. DnaB subfamily.


ensembl_gene_id: SAMN04488502_110104
symbol: purA
gene_biotype: protein_coding
description:
  Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family.


ensembl_gene_id: SAMN04488502_110112
symbol: SDN02591.1
gene_biotype: protein_coding
description:
  Bacillibactin ABC transporter integral membrane protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.


ensembl_gene_id: SAMN04488502_11018
symbol: SDM99171.1
gene_biotype: protein_coding
description:
  Peptidyl-prolyl cis-trans isomerase B (cyclophilin B); PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.


ensembl_gene_id: SAMN04488502_11023
symbol: corA
gene_biotype: protein_coding
description:
  Magnesium transporter; Mediates influx of magnesium ions. Belongs to the CorA metal ion transporter (MIT) (TC 1.A.35) family.


ensembl_gene_id: SAMN04488502_11032
symbol: bioA
gene_biotype: protein_coding
description:
  Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Catalyzes the transfer of the alpha-amino group from S- adenosyl-L-methionine (SAM) to 7-keto-8-aminopelargonic acid (KAPA) to form 7,8-diaminopelargonic acid (DAPA). It is the only animotransferase known to utilize SAM as an amino donor; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. BioA subfamily.


ensembl_gene_id: SAMN04488502_11033
symbol: bioD
gene_biotype: protein_coding
description:
  Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.


ensembl_gene_id: SAMN04488502_11034
symbol: SDM99807.1
gene_biotype: protein_coding
description:
  Glycine C-acetyltransferase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide.


ensembl_gene_id: SAMN04488502_11035
symbol: bioW
gene_biotype: protein_coding
description:
  6-carboxyhexanoate--CoA ligase; Catalyzes the transformation of pimelate into pimeloyl-CoA with concomitant hydrolysis of ATP to AMP.


ensembl_gene_id: SAMN04488502_11047
symbol: gyrB
gene_biotype: protein_coding
description:
  DNA gyrase subunit B; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN04488502_11050
symbol: recF
gene_biotype: protein_coding
description:
  DNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.


ensembl_gene_id: SAMN04488502_11052
symbol: SDN00462.1
gene_biotype: protein_coding
description:
  DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...]


ensembl_gene_id: SAMN04488502_11053
symbol: dnaA
gene_biotype: protein_coding
description:
  Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family.


ensembl_gene_id: SAMN04488502_11055
symbol: rnpA
gene_biotype: protein_coding
description:
  Ribonuclease P protein component; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.


ensembl_gene_id: SAMN04488502_11056
symbol: SDN00630.1
gene_biotype: protein_coding
description:
  Hypothetical protein; Could be involved in insertion of integral membrane proteins into the membrane; Belongs to the UPF0161 family.


ensembl_gene_id: SAMN04488502_11059
symbol: mnmE
gene_biotype: protein_coding
description:
  tRNA modification GTPase trmE; Exhibits a very high intrinsic GTPase hydrolysis rate. Involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA- cmnm(5)s(2)U34; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family.


ensembl_gene_id: SAMN04488502_11060
symbol: mnmG
gene_biotype: protein_coding
description:
  tRNA uridine 5-carboxymethylaminomethyl modification enzyme; NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34; Belongs to the MnmG family.


ensembl_gene_id: SAMN04488502_11061
symbol: rsmG
gene_biotype: protein_coding
description:
  16S rRNA m(7)G-527 methyltransferase; Specifically methylates the N7 position of a guanine in 16S rRNA; Belongs to the methyltransferase superfamily. RNA methyltransferase RsmG family.


ensembl_gene_id: SAMN04488502_1107
symbol: SDM98727.1
gene_biotype: protein_coding
description:
  Hydrophobic/amphiphilic exporter-1, HAE1 family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.


ensembl_gene_id: SAMN04488502_11081
symbol: SDN01564.1
gene_biotype: protein_coding
description:
  Amino acid/amide ABC transporter membrane protein 1, HAAT family (TC 3.A.1.4.-); Belongs to the binding-protein-dependent transport system permease family.


ensembl_gene_id: SAMN04488502_11086
symbol: SDN01727.1
gene_biotype: protein_coding
description:
  Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.


ensembl_gene_id: SAMN04488502_1109
symbol: gyrA
gene_biotype: protein_coding
description:
  DNA gyrase subunit A; A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner.


ensembl_gene_id: SAMN04488502_11093
symbol: ychF
gene_biotype: protein_coding
description:
  Hypothetical protein; ATPase that binds to both the 70S ribosome and the 50S ribosomal subunit in a nucleotide-independent manner.


ensembl_gene_id: SAMN04488502_11095
symbol: SDN02000.1
gene_biotype: protein_coding
description:
  Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism.


ensembl_gene_id: SAMN04488502_11096
symbol: rpsR
gene_biotype: protein_coding
description:
  Small subunit ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.


ensembl_gene_id: SAMN04488502_11099
symbol: SDN02143.1
gene_biotype: protein_coding
description:
  c-di-AMP phosphodiesterase, consists of a GGDEF-like and DHH domains; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family.


ensembl_gene_id: SAMN04488502_111101
symbol: ispD
gene_biotype: protein_coding
description:
  2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). Belongs to the short-chain dehydrogenases/reductases (SDR) family.


ensembl_gene_id: SAMN04488502_11114
symbol: thiL
gene_biotype: protein_coding
description:
  Thiamine-phosphate kinase; Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1; Belongs to the thiamine-monophosphate kinase family.


ensembl_gene_id: SAMN04488502_11121
symbol: nnrE
gene_biotype: protein_coding
description:
  NAD(P)H-hydrate epimerase; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration.  Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of bot [...]


ensembl_gene_id: SAMN04488502_11122
symbol: acpS
gene_biotype: protein_coding
description:
  Holo-[acyl-carrier protein] synthase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.


ensembl_gene_id: SAMN04488502_11147
symbol: phnC
gene_biotype: protein_coding
description:
  Phosphonate transport system ATP-binding protein; Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphonates importer (TC 3.A.1.9.1) family.


ensembl_gene_id: SAMN04488502_1115
symbol: groL
gene_biotype: protein_coding
description:
  Chaperonin GroEL; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions.


ensembl_gene_id: SAMN04488502_11158
symbol: SDN06777.1
gene_biotype: protein_coding
description:
  Plasma-membrane calcium-translocating P-type ATPase/potassium and/or sodium efflux P-type ATPase,TIGR01523.


ensembl_gene_id: SAMN04488502_11159
symbol: selO
gene_biotype: protein_coding
description:
  Uncharacterized conserved protein YdiU, UPF0061 family; Catalyzes the transfer of adenosine 5'-monophosphate (AMP) to Ser, Thr or Tyr residues of target proteins (AMPylation). Belongs to the SELO family.


ensembl_gene_id: SAMN04488502_1116
symbol: groS
gene_biotype: protein_coding
description:
  Chaperonin GroES; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter.


ensembl_gene_id: SAMN04488502_11185
symbol: SDN07779.1
gene_biotype: protein_coding
description:
  Sulfite reductase, beta subunit (hemoprotein); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.


ensembl_gene_id: SAMN04488502_1119
symbol: tsaD
gene_biotype: protein_coding
description:
  N6-L-threonylcarbamoyladenine synthase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.


ensembl_gene_id: SAMN04488502_112100
symbol: SDN13612.1
gene_biotype: protein_coding
description:
  FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase.


ensembl_gene_id: SAMN04488502_112101
symbol: mdh
gene_biotype: protein_coding
description:
  Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 3 family.


ensembl_gene_id: SAMN04488502_112107
symbol: uvrC
gene_biotype: protein_coding
description:
  Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision.


ensembl_gene_id: SAMN04488502_11216
symbol: SDN10722.1
gene_biotype: protein_coding
description:
  Riboflavin transporter FmnP; Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins; Belongs to the prokaryotic riboflavin transporter (P-RFT) (TC 2.A.87) family.


ensembl_gene_id: SAMN04488502_11222
symbol: SDN10939.1
gene_biotype: protein_coding
description:
  MFS transporter, DHA2 family, lincomycin resistance protein; Belongs to the major facilitator superfamily.


ensembl_gene_id: SAMN04488502_11271
symbol: smpB
gene_biotype: protein_coding
description:
  SsrA-binding protein; Required for rescue of stalled ribosomes mediated by trans- translation. Binds to transfer-messenger RNA (tmRNA), required for stable association of tmRNA with ribosomes. tmRNA and SmpB together mimic tRNA shape, replacing the anticodon stem-loop with SmpB. tmRNA is encoded by the ssrA gene; the 2 termini fold to resemble tRNA(Ala) and it encodes a 'tag peptide', a short internal open reading frame. During trans-translation Ala-aminoacylated tmRNA acts like a tRNA, entering the A-site of stalled ribosomes, displacing the stalled mRNA. The ribosome then switches to [...]


ensembl_gene_id: SAMN04488502_11272
symbol: rnr
gene_biotype: protein_coding
description:
  Ribonuclease R; 3'-5' exoribonuclease that releases 5'-nucleoside monophosphates and is involved in maturation of structured RNAs.


ensembl_gene_id: SAMN04488502_11276
symbol: hppA
gene_biotype: protein_coding
description:
  K(+)-stimulated pyrophosphate-energized sodium pump; Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane. Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily.


ensembl_gene_id: SAMN04488502_11277
symbol: SDN12887.1
gene_biotype: protein_coding
description:
  Preprotein translocase subunit SecG; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family.


ensembl_gene_id: SAMN04488502_11281
symbol: eno
gene_biotype: protein_coding
description:
  Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family.


ensembl_gene_id: SAMN04488502_11282
symbol: gpmI
gene_biotype: protein_coding
description:
  Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.


ensembl_gene_id: SAMN04488502_11283
symbol: tpiA
gene_biotype: protein_coding
description:
  Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.


ensembl_gene_id: SAMN04488502_11285
symbol: SDN13146.1
gene_biotype: protein_coding
description:
  Glyceraldehyde-3-phosphate dehydrogenase (NAD+); Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.


ensembl_gene_id: SAMN04488502_1129
symbol: SDN10454.1
gene_biotype: protein_coding
description:
  Taurine-pyruvate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.


ensembl_gene_id: SAMN04488502_11293
symbol: SDN13405.1
gene_biotype: protein_coding
description:
  Conserved hypothetical protein, cofD-related; Required for morphogenesis under gluconeogenic growth conditions; Belongs to the gluconeogenesis factor family.


ensembl_gene_id: SAMN04488502_11312
symbol: ppk
gene_biotype: protein_coding
description:
  Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.


ensembl_gene_id: SAMN04488502_11322
symbol: dinB
gene_biotype: protein_coding
description:
  DNA polymerase-4; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII.


ensembl_gene_id: SAMN04488502_11332
symbol: addB
gene_biotype: protein_coding
description:
  DNA helicase/exodeoxyribonuclease V, subunit B; ATP-dependent DNA helicase; Belongs to the helicase family. AddB/RexB type 1 subfamily.


ensembl_gene_id: SAMN04488502_11334
symbol: sbcD
gene_biotype: protein_coding
description:
  Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family.


ensembl_gene_id: SAMN04488502_11346
symbol: SDN16527.1
gene_biotype: protein_coding
description:
  Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.


ensembl_gene_id: SAMN04488502_11349
symbol: hypA
gene_biotype: protein_coding
description:
  Hydrogenase nickel incorporation protein HypA/HybF; Involved in the maturation of [NiFe] hydrogenases. Required for nickel insertion into the metal center of the hydrogenase.


ensembl_gene_id: SAMN04488502_11370
symbol: metXA
gene_biotype: protein_coding
description:
  Homoserine O-acetyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine.


ensembl_gene_id: SAMN04488502_11373
symbol: trmB
gene_biotype: protein_coding
description:
  tRNA (guanine-N7-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.


ensembl_gene_id: SAMN04488502_11412
symbol: SDN19098.1
gene_biotype: protein_coding
description:
  Cys-tRNA(Pro)/Cys-tRNA(Cys) deacylase; Belongs to the prolyl-tRNA editing family. YbaK/EbsC subfamily.


ensembl_gene_id: SAMN04488502_11413
symbol: nadE
gene_biotype: protein_coding
description:
  NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.


ensembl_gene_id: SAMN04488502_11431
symbol: pyrE
gene_biotype: protein_coding
description:
  Orotate phosphoribosyltransferase; Catalyzes the transfer of a ribosyl phosphate group from 5- phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP).


ensembl_gene_id: SAMN04488502_11432
symbol: pyrF
gene_biotype: protein_coding
description:
  Orotidine-5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily.


ensembl_gene_id: SAMN04488502_11433
symbol: pyrD
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase (NAD+) catalytic subunit; Catalyzes the conversion of dihydroorotate to orotate.


ensembl_gene_id: SAMN04488502_11434
symbol: pyrK
gene_biotype: protein_coding
description:
  Dihydroorotate dehydrogenase electron transfer subunit; Responsible for channeling the electrons from the oxidation of dihydroorotate from the FMN redox center in the PyrD type B subunit to the ultimate electron acceptor NAD(+).


ensembl_gene_id: SAMN04488502_11437
symbol: pyrC
gene_biotype: protein_coding
description:
  Dihydroorotase; Catalyzes the reversible cyclization of carbamoyl aspartate to dihydroorotate; Belongs to the metallo-dependent hydrolases superfamily. DHOase family. Class I DHOase subfamily.


ensembl_gene_id: SAMN04488502_11438
symbol: pyrB
gene_biotype: protein_coding
description:
  Aspartate carbamoyltransferase; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. ATCase family.


ensembl_gene_id: SAMN04488502_11457
symbol: coaE
gene_biotype: protein_coding
description:
  dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.


ensembl_gene_id: SAMN04488502_11459
symbol: polA
gene_biotype: protein_coding
description:
  DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity.


ensembl_gene_id: SAMN04488502_1147
symbol: ku
gene_biotype: protein_coding
description:
  DNA end-binding protein Ku; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5'- and 3'- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD. Belongs to the prokaryotic Ku family.


ensembl_gene_id: SAMN04488502_1149
symbol: pckA
gene_biotype: protein_coding
description:
  Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.


ensembl_gene_id: SAMN04488502_11624
symbol: ilvC
gene_biotype: protein_coding
description:
  Ketol-acid reductoisomerase; Involved in the biosynthesis of branched-chain amino acids (BCAA). Catalyzes an alkyl-migration followed by a ketol-acid reduction of (S)-2-acetolactate (S2AL) to yield (R)-2,3-dihydroxy-isovalerate. In the isomerase reaction, S2AL is rearranged via a Mg-dependent methyl migration to produce 3-hydroxy-3-methyl-2-ketobutyrate (HMKB). In the reductase reaction, this 2-ketoacid undergoes a metal-dependent reduction by NADPH to yield (R)-2,3-dihydroxy-isovalerate.


ensembl_gene_id: SAMN04488502_11625
symbol: leuA
gene_biotype: protein_coding
description:
  2-isopropylmalate synthase; Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3- hydroxy-4-methylpentanoate (2-isopropylmalate); Belongs to the alpha-IPM synthase/homocitrate synthase family. LeuA type 1 subfamily.


ensembl_gene_id: SAMN04488502_11626
symbol: leuC
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.


ensembl_gene_id: SAMN04488502_11627
symbol: leuD
gene_biotype: protein_coding
description:
  3-isopropylmalate/(R)-2-methylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.


ensembl_gene_id: SAMN04488502_11628
symbol: leuB
gene_biotype: protein_coding
description:
  3-isopropylmalate dehydrogenase; Catalyzes the oxidation of 3-carboxy-2-hydroxy-4- methylpentanoate (3-isopropylmalate) to 3-carboxy-4-methyl-2- oxopentanoate. The product decarboxylates to 4-methyl-2 oxopentanoate.


ensembl_gene_id: SAMN04488502_11644
symbol: speE
gene_biotype: protein_coding
description:
  Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine.


ensembl_gene_id: SAMN04488502_11663
symbol: SDN28725.1
gene_biotype: protein_coding
description:
  UDP-N-acetyl-D-galactosamine dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.


ensembl_gene_id: SAMN04488502_11722
symbol: SDN30633.1
gene_biotype: protein_coding
description:
  [citrate (pro-3S)-lyase] ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase.


ensembl_gene_id: SAMN04488502_11728
symbol: glmE
gene_biotype: protein_coding
description:
  Glutamate mutase subunit E; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).


ensembl_gene_id: SAMN04488502_11730
symbol: glmS-2
gene_biotype: protein_coding
description:
  Glutamate mutase subunit S; Catalyzes the carbon skeleton rearrangement of L-glutamate to L-threo-3-methylaspartate ((2S,3S)-3-methylaspartate).


ensembl_gene_id: SAMN04488502_11734
symbol: SDN31143.1
gene_biotype: protein_coding
description:
  XTP/dITP diphosphohydrolase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.


ensembl_gene_id: SAMN04488502_11735
symbol: rph
gene_biotype: protein_coding
description:
  RNAse PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation.


ensembl_gene_id: SAMN04488502_11817
symbol: moaC
gene_biotype: protein_coding
description:
  Cyclic pyranopterin monophosphate synthase subunit MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.


ensembl_gene_id: SAMN04488502_11818
symbol: SDN32983.1
gene_biotype: protein_coding
description:
  Molybdenum cofactor synthesis domain-containing protein; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN04488502_11819
symbol: SDN33011.1
gene_biotype: protein_coding
description:
  Molybdopterin molybdochelatase; Catalyzes the insertion of molybdate into adenylated molybdopterin with the concomitant release of AMP. Belongs to the MoeA family.


ensembl_gene_id: SAMN04488502_11821
symbol: moaA
gene_biotype: protein_coding
description:
  Cyclic pyranopterin phosphate synthase; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.


ensembl_gene_id: SAMN04488502_11822
symbol: SDN33145.1
gene_biotype: protein_coding
description:
  Anaerobic selenocysteine-containing dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.


ensembl_gene_id: SAMN04488502_11911
symbol: SDN33933.1
gene_biotype: protein_coding
description:
  T/G mismatch-specific endonuclease; May nick specific sequences that contain T:G mispairs resulting from m5C-deamination.


ensembl_gene_id: SAMN04488502_12111
symbol: SDN35667.1
gene_biotype: protein_coding
description:
  6-phosphogluconate dehydrogenase; Catalyzes the oxidative decarboxylation of 6-phosphogluconate to ribulose 5-phosphate and CO(2), with concomitant reduction of NADP to NADPH.


# pathwayInfo

id: CL:100
description: Translation, and RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:100_Translation,_and_RNA_metabolic_process


id: CL:1024
description: Mixed, incl. SepF-like superfamily, and Thylakoid
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1024_Mixed,_incl._SepF-like_superfamily,_and_Thylakoid


id: CL:103
description: Mixed, incl. Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:103_Mixed,_incl._Ribosome,_and_Regulation_of_translation


id: CL:1041
description: Mixed, incl. Cell morphogenesis, and Penicillin-binding protein 2
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1041_Mixed,_incl._Cell_morphogenesis,_and_Penicillin-binding_protein_2


id: CL:1043
description: Mixed, incl. Actin, and Penicillin-binding protein 2
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1043_Mixed,_incl._Actin,_and_Penicillin-binding_protein_2


id: CL:105
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:105_Ribosome,_and_Regulation_of_translation


id: CL:107
description: Ribosome, and Regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:107_Ribosome,_and_Regulation_of_translation


id: CL:1070
description: Mostly uncharacterized, incl. GDP metabolic process, and Forkhead associated domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1070_Mostly_uncharacterized,_incl._GDP_metabolic_process,_and_Forkhead_associated_domain


id: CL:1071
description: Mixed, incl. Forkhead associated domain, and rRNA methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1071_Mixed,_incl._Forkhead_associated_domain,_and_rRNA_methyltransferase_activity


id: CL:1074
description: Mixed, incl. Forkhead associated domain, and Serine/threonine-protein kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1074_Mixed,_incl._Forkhead_associated_domain,_and_Serine/threonine-protein_kinase


id: CL:1087
description: rRNA methyltransferase activity, and Methanogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1087_rRNA_methyltransferase_activity,_and_Methanogenesis


id: CL:1097
description: GDP metabolic process, and rRNA catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1097_GDP_metabolic_process,_and_rRNA_catabolic_process


id: CL:1116
description: Mixed, incl. Proline biosynthesis, and NAD biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1116_Mixed,_incl._Proline_biosynthesis,_and_NAD_biosynthetic_process


id: CL:1117
description: Proline biosynthesis, and NAD biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1117_Proline_biosynthesis,_and_NAD_biosynthetic_process


id: CL:112
description: Ribosome, and Translation regulator activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:112_Ribosome,_and_Translation_regulator_activity


id: CL:1132
description: Mixed, incl. Peptidase family M50, and Radical SAM domain-containing protein, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1132_Mixed,_incl._Peptidase_family_M50,_and_Radical_SAM_domain-containing_protein,_N-terminal


id: CL:1141
description: Mostly uncharacterized, incl. Chromosome segregation, and Phospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1141_Mostly_uncharacterized,_incl._Chromosome_segregation,_and_Phospholipid_metabolism


id: CL:1142
description: Mixed, incl. Chromosome segregation, and Phospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1142_Mixed,_incl._Chromosome_segregation,_and_Phospholipid_metabolism


id: CL:1143
description: Mixed, incl. Phospholipid metabolism, and HI0933-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1143_Mixed,_incl._Phospholipid_metabolism,_and_HI0933-like_protein


id: CL:1145
description: Mixed, incl. HI0933-like protein, and rRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1145_Mixed,_incl._HI0933-like_protein,_and_rRNA_pseudouridine_synthesis


id: CL:116
description: Ribosome, and Translational elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:116_Ribosome,_and_Translational_elongation


id: CL:1166
description: Chromosome segregation, and Peptidase family M50
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1166_Chromosome_segregation,_and_Peptidase_family_M50


id: CL:1181
description: Mixed, incl. DNA catabolic process, and Alkaline shock protein Asp23
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1181_Mixed,_incl._DNA_catabolic_process,_and_Alkaline_shock_protein_Asp23


id: CL:1182
description: Mixed, incl. DNA catabolic process, and Alkaline shock protein Asp23
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1182_Mixed,_incl._DNA_catabolic_process,_and_Alkaline_shock_protein_Asp23


id: CL:1184
description: Mixed, incl. NAD+ kinase activity, and Transketolase, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1184_Mixed,_incl._NAD+_kinase_activity,_and_Transketolase,_N-terminal


id: CL:119
description: Ribosome, and Translational elongation
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:119_Ribosome,_and_Translational_elongation


id: CL:1200
description: Alkaline shock protein Asp23, and Kae1/TsaD family
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1200_Alkaline_shock_protein_Asp23,_and_Kae1/TsaD_family


id: CL:1209
description: Mixed, incl. Lipid-binding, and Coenzyme A biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1209_Mixed,_incl._Lipid-binding,_and_Coenzyme_A_biosynthesis


id: CL:1221
description: Mixed, incl. Sulfite exporter TauE/SafE, and Mismatched DNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1221_Mixed,_incl._Sulfite_exporter_TauE/SafE,_and_Mismatched_DNA_binding


id: CL:1223
description: Mismatched DNA binding, and rRNA (guanine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1223_Mismatched_DNA_binding,_and_rRNA_(guanine)_methyltransferase_activity


id: CL:123
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:123_Structural_constituent_of_ribosome


id: CL:1233
description: Sulfite exporter TauE/SafE, and Alkaline shock protein Asp23
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1233_Sulfite_exporter_TauE/SafE,_and_Alkaline_shock_protein_Asp23


id: CL:1249
description: Mixed, incl. Vitamin biosynthetic process, and Pyridine nucleotide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1249_Mixed,_incl._Vitamin_biosynthetic_process,_and_Pyridine_nucleotide_metabolic_process


id: CL:1250
description: Mixed, incl. Cellular modified amino acid biosynthetic process, and Riboflavin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1250_Mixed,_incl._Cellular_modified_amino_acid_biosynthetic_process,_and_Riboflavin_metabolic_process


id: CL:1251
description: Riboflavin metabolic process, and Cellular modified amino acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1251_Riboflavin_metabolic_process,_and_Cellular_modified_amino_acid_biosynthetic_process


id: CL:1253
description: Riboflavin metabolic process, and Folic acid biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1253_Riboflavin_metabolic_process,_and_Folic_acid_biosynthetic_process


id: CL:126
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:126_Structural_constituent_of_ribosome


id: CL:127
description: rRNA binding, and glutamyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:127_rRNA_binding,_and_glutamyl-tRNA_aminoacylation


id: CL:1279
description: Pantothenate metabolic process, and RNA repair
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1279_Pantothenate_metabolic_process,_and_RNA_repair


id: CL:128
description: Mixed, incl. Large ribosomal subunit, and glutamyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:128_Mixed,_incl._Large_ribosomal_subunit,_and_glutamyl-tRNA_aminoacylation


id: CL:1281
description: Pantothenate metabolic process, and Coenzyme A metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1281_Pantothenate_metabolic_process,_and_Coenzyme_A_metabolic_process


id: CL:1302
description: Pyridine nucleotide metabolic process, and NUDIX domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1302_Pyridine_nucleotide_metabolic_process,_and_NUDIX_domain


id: CL:1305
description: Pyridine nucleotide metabolic process, and NUDIX domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1305_Pyridine_nucleotide_metabolic_process,_and_NUDIX_domain


id: CL:1309
description: Pyridine nucleotide biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1309_Pyridine_nucleotide_biosynthetic_process


id: CL:1341
description: Mixed, incl. Biotin metabolic process, and Peptidase M48
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1341_Mixed,_incl._Biotin_metabolic_process,_and_Peptidase_M48


id: CL:1343
description: Biotin biosynthesis, and Haloacid dehalogenase-like hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1343_Biotin_biosynthesis,_and_Haloacid_dehalogenase-like_hydrolase


id: CL:1374
description: Mostly uncharacterized, incl. GIY-YIG endonuclease, and K Homology domain, type 1
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1374_Mostly_uncharacterized,_incl._GIY-YIG_endonuclease,_and_K_Homology_domain,_type_1


id: CL:1377
description: Mixed, incl. dTTP biosynthetic process, and rRNA (cytosine) methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1377_Mixed,_incl._dTTP_biosynthetic_process,_and_rRNA_(cytosine)_methyltransferase_activity


id: CL:1400
description: Microbial metabolism in diverse environments, and Lactate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1400_Microbial_metabolism_in_diverse_environments,_and_Lactate_transport


id: CL:1401
description: Citrate cycle (TCA cycle), and Microbial metabolism in diverse environments
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1401_Citrate_cycle_(TCA_cycle),_and_Microbial_metabolism_in_diverse_environments


id: CL:1403
description: Mixed, incl. Citrate cycle (TCA cycle), and Alpha-helical ferredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1403_Mixed,_incl._Citrate_cycle_(TCA_cycle),_and_Alpha-helical_ferredoxin


id: CL:1404
description: Citrate cycle (TCA cycle), and Propanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1404_Citrate_cycle_(TCA_cycle),_and_Propanoate_metabolism


id: CL:1405
description: Citrate cycle (TCA cycle), and Propanoate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1405_Citrate_cycle_(TCA_cycle),_and_Propanoate_metabolism


id: CL:1406
description: Propanoate metabolism, and Sodium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1406_Propanoate_metabolism,_and_Sodium_ion_transport


id: CL:1407
description: Single hybrid motif, and Sodium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1407_Single_hybrid_motif,_and_Sodium_ion_transport


id: CL:1409
description: Biotin carboxylation domain, and Biotin
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1409_Biotin_carboxylation_domain,_and_Biotin


id: CL:1422
description: Sodium ion transport, and Single hybrid motif
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1422_Sodium_ion_transport,_and_Single_hybrid_motif


id: CL:1433
description: Methylmalonyl-CoA mutase, and SIMIBI class G3E GTPase, ArgK/MeaB
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1433_Methylmalonyl-CoA_mutase,_and_SIMIBI_class_G3E_GTPase,_ArgK/MeaB


id: CL:1452
description: Pyruvate ferredoxin/flavodoxin oxidoreductase, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1452_Pyruvate_ferredoxin/flavodoxin_oxidoreductase,_and_4Fe-4S_binding_domain


id: CL:147
description: Mixed, incl. Large ribosomal subunit, and Large ribosomal subunit rRNA binding
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:147_Mixed,_incl._Large_ribosomal_subunit,_and_Large_ribosomal_subunit_rRNA_binding


id: CL:1487
description: Mixed, incl. Tricarboxylic acid cycle, and Fumarase C-terminus
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1487_Mixed,_incl._Tricarboxylic_acid_cycle,_and_Fumarase_C-terminus


id: CL:1490
description: Mixed, incl. Tricarboxylic acid cycle, and Fumarase C-terminus
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1490_Mixed,_incl._Tricarboxylic_acid_cycle,_and_Fumarase_C-terminus


id: CL:1515
description: Mixed, incl. Alpha-helical ferredoxin, and Glutamate synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1515_Mixed,_incl._Alpha-helical_ferredoxin,_and_Glutamate_synthase_activity


id: CL:1517
description: Mixed, incl. Glutamate biosynthetic process, and NADH:flavin oxidoreductase / NADH oxidase family
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1517_Mixed,_incl._Glutamate_biosynthetic_process,_and_NADH:flavin_oxidoreductase_/_NADH_oxidase_family


id: CL:1520
description: Glutamate biosynthetic process, and NADH:flavin oxidoreductase / NADH oxidase family
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1520_Glutamate_biosynthetic_process,_and_NADH:flavin_oxidoreductase_/_NADH_oxidase_family


id: CL:1523
description: Glutamate biosynthetic process, and Dihydroprymidine dehydrogenase domain II
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1523_Glutamate_biosynthetic_process,_and_Dihydroprymidine_dehydrogenase_domain_II


id: CL:1549
description: Mixed, incl. BFD-like [2Fe-2S] binding domain, and Aldehyde dehydrogenase, cysteine active site
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1549_Mixed,_incl._BFD-like_[2Fe-2S]_binding_domain,_and_Aldehyde_dehydrogenase,_cysteine_active_site


id: CL:1559
description: Mixed, incl. Cysteine-rich domain, and Vanillyl-alcohol oxidase, C-terminal subdomain 2
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1559_Mixed,_incl._Cysteine-rich_domain,_and_Vanillyl-alcohol_oxidase,_C-terminal_subdomain_2


id: CL:1561
description: Lactate metabolic process, and Butyrate metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1561_Lactate_metabolic_process,_and_Butyrate_metabolic_process


id: CL:1587
description: Vanillyl-alcohol oxidase, C-terminal subdomain 2, and Glycolate oxidase, iron-sulphur subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1587_Vanillyl-alcohol_oxidase,_C-terminal_subdomain_2,_and_Glycolate_oxidase,_iron-sulphur_subunit


id: CL:1605
description: Indolepyruvate oxidoreductase subunit IorA, and Xenobiotic catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1605_Indolepyruvate_oxidoreductase_subunit_IorA,_and_Xenobiotic_catabolic_process


id: CL:1614
description: Mixed, incl. Alcohol dehydrogenase, iron-type/glycerol dehydrogenase GldA, and Organic radical
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1614_Mixed,_incl._Alcohol_dehydrogenase,_iron-type/glycerol_dehydrogenase_GldA,_and_Organic_radical


id: CL:1615
description: Iron-type alcohol dehydrogenase-like, and Glycerol dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1615_Iron-type_alcohol_dehydrogenase-like,_and_Glycerol_dehydrogenase


id: CL:1618
description: NADPH-dependent butanol dehydrogenase, and Iron-containing alcohol dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1618_NADPH-dependent_butanol_dehydrogenase,_and_Iron-containing_alcohol_dehydrogenase


id: CL:162
description: Mixed, incl. Small ribosomal subunit, and Ribosomal protein L7Ae/L30e/S12e/Gadd45
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:162_Mixed,_incl._Small_ribosomal_subunit,_and_Ribosomal_protein_L7Ae/L30e/S12e/Gadd45


id: CL:1636
description: Organic radical, and Radical-activating enzyme, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1636_Organic_radical,_and_Radical-activating_enzyme,_conserved_site


id: CL:1647
description: Mixed, incl. Fatty acid metabolic process, and Antibiotic biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1647_Mixed,_incl._Fatty_acid_metabolic_process,_and_Antibiotic_biosynthetic_process


id: CL:1648
description: Mixed, incl. Fatty acid metabolic process, and Antibiotic biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1648_Mixed,_incl._Fatty_acid_metabolic_process,_and_Antibiotic_biosynthetic_process


id: CL:1649
description: Mixed, incl. Fatty acid metabolic process, and Antibiotic biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1649_Mixed,_incl._Fatty_acid_metabolic_process,_and_Antibiotic_biosynthetic_process


id: CL:1651
description: Mixed, incl. Fatty acid metabolism, and Phosphopantetheine
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1651_Mixed,_incl._Fatty_acid_metabolism,_and_Phosphopantetheine


id: CL:1653
description: Mixed, incl. Fatty acid metabolism, and Phosphopantetheine binding
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1653_Mixed,_incl._Fatty_acid_metabolism,_and_Phosphopantetheine_binding


id: CL:1654
description: Thiolase-like, and Fatty acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1654_Thiolase-like,_and_Fatty_acid_metabolic_process


id: CL:1657
description: Beta-ketoacyl synthase, C-terminal, and Fatty acid biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1657_Beta-ketoacyl_synthase,_C-terminal,_and_Fatty_acid_biosynthesis


id: CL:1660
description: Phosphopantetheine binding, and Fatty acid synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1660_Phosphopantetheine_binding,_and_Fatty_acid_synthase_activity


id: CL:1661
description: Phosphopantetheine binding, and Acyl transferase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1661_Phosphopantetheine_binding,_and_Acyl_transferase


id: CL:1664
description: Phosphopantetheine binding, and Thioesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1664_Phosphopantetheine_binding,_and_Thioesterase


id: CL:1665
description: Beta-ketoacyl synthase, active site, and Thioesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1665_Beta-ketoacyl_synthase,_active_site,_and_Thioesterase


id: CL:1674
description: ACPs in this domain have a fully conserved tryptophan., and Condensation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1674_ACPs_in_this_domain_have_a_fully_conserved_tryptophan.,_and_Condensation_domain


id: CL:1691
description: Fatty acid synthase activity, and Phosphopantetheine binding
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1691_Fatty_acid_synthase_activity,_and_Phosphopantetheine_binding


id: CL:1710
description: Fatty acid metabolism, and Nitronate monooxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1710_Fatty_acid_metabolism,_and_Nitronate_monooxygenase


id: CL:1724
description: Enoyl-CoA hydratase/isomerase, and Lipid oxidation
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1724_Enoyl-CoA_hydratase/isomerase,_and_Lipid_oxidation


id: CL:1739
description: ANL, N-terminal domain, and Superoxide dismutase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1739_ANL,_N-terminal_domain,_and_Superoxide_dismutase_activity


id: CL:1756
description: Biosynthesis of siderophore group nonribosomal peptides, and ADC synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1756_Biosynthesis_of_siderophore_group_nonribosomal_peptides,_and_ADC_synthase


id: CL:1784
description: Alpha/beta hydrolase fold, and Peptidase M29
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1784_Alpha/beta_hydrolase_fold,_and_Peptidase_M29


id: CL:1795
description: Electron transfer flavoprotein domain, and Acyl-CoA dehydrogenase, middle domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1795_Electron_transfer_flavoprotein_domain,_and_Acyl-CoA_dehydrogenase,_middle_domain


id: CL:1797
description: Electron transfer flavoprotein domain, and Acyl-CoA dehydrogenase, middle domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1797_Electron_transfer_flavoprotein_domain,_and_Acyl-CoA_dehydrogenase,_middle_domain


id: CL:1799
description: Electron transfer flavoprotein domain, and Acyl-CoA dehydrogenase, middle domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1799_Electron_transfer_flavoprotein_domain,_and_Acyl-CoA_dehydrogenase,_middle_domain


id: CL:1830
description: Oxidative phosphorylation, and 4Fe-4S binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1830_Oxidative_phosphorylation,_and_4Fe-4S_binding_domain


id: CL:1832
description: NADH dehydrogenase activity, and NADH dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1832_NADH_dehydrogenase_activity,_and_NADH_dehydrogenase


id: CL:1838
description: Quinone, and NADH-quinone oxidoreductase, chain I
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1838_Quinone,_and_NADH-quinone_oxidoreductase,_chain_I


id: CL:1862
description: Quinone, and NADH-quinone oxidoreductase, chain I
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1862_Quinone,_and_NADH-quinone_oxidoreductase,_chain_I


id: CL:1874
description: Proton-conducting membrane transporter, and NADH-ubiquinone oxidoreductase chain 4L/K
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1874_Proton-conducting_membrane_transporter,_and_NADH-ubiquinone_oxidoreductase_chain_4L/K


id: CL:1889
description: Anaerobic electron transport chain, and Nickel-dependent hydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1889_Anaerobic_electron_transport_chain,_and_Nickel-dependent_hydrogenase


id: CL:1904
description: Mixed, incl. Iron hydrogenase, and Thioredoxin-like [2Fe-2S] ferredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1904_Mixed,_incl._Iron_hydrogenase,_and_Thioredoxin-like_[2Fe-2S]_ferredoxin


id: CL:1906
description: 4Fe-4S binding domain, and Thioredoxin-like [2Fe-2S] ferredoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1906_4Fe-4S_binding_domain,_and_Thioredoxin-like_[2Fe-2S]_ferredoxin


id: CL:1923
description: Iron hydrogenase, and Twin-arginine translocation pathway, signal sequence, bacterial/archaeal
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1923_Iron_hydrogenase,_and_Twin-arginine_translocation_pathway,_signal_sequence,_bacterial/archaeal


id: CL:193
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:193_Structural_constituent_of_ribosome


id: CL:1935
description: Mixed, incl. Vicinal oxygen chelate (VOC) domain, and Sodium:solute symporter family
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1935_Mixed,_incl._Vicinal_oxygen_chelate_(VOC)_domain,_and_Sodium:solute_symporter_family


id: CL:1938
description: Sodium:solute symporter family, and Aldehyde dehydrogenase, glutamic acid active site
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1938_Sodium:solute_symporter_family,_and_Aldehyde_dehydrogenase,_glutamic_acid_active_site


id: CL:195
description: Structural constituent of ribosome
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:195_Structural_constituent_of_ribosome


id: CL:1953
description: Vicinal oxygen chelate (VOC) domain, and Phosphatidylglycerol lysyltransferase, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1953_Vicinal_oxygen_chelate_(VOC)_domain,_and_Phosphatidylglycerol_lysyltransferase,_C-terminal


id: CL:1964
description: Mixed, incl. Carbohydrate catabolic process, and NAD(P)-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1964_Mixed,_incl._Carbohydrate_catabolic_process,_and_NAD(P)-binding_domain_superfamily


id: CL:1965
description: Mixed, incl. Carbohydrate catabolic process, and NAD(P)-binding domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1965_Mixed,_incl._Carbohydrate_catabolic_process,_and_NAD(P)-binding_domain_superfamily


id: CL:1966
description: Mixed, incl. Carbohydrate catabolic process, and Phosphotransferase system (PTS)
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1966_Mixed,_incl._Carbohydrate_catabolic_process,_and_Phosphotransferase_system_(PTS)


id: CL:1968
description: Mixed, incl. Carbohydrate catabolic process, and Zinc-binding dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1968_Mixed,_incl._Carbohydrate_catabolic_process,_and_Zinc-binding_dehydrogenase


id: CL:1969
description: Mixed, incl. Carbohydrate catabolic process, and Zinc-binding dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1969_Mixed,_incl._Carbohydrate_catabolic_process,_and_Zinc-binding_dehydrogenase


id: CL:1970
description: Mixed, incl. Glycolytic process, and NADPH regeneration
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1970_Mixed,_incl._Glycolytic_process,_and_NADPH_regeneration


id: CL:1972
description: Glycolytic process, and NADPH regeneration
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1972_Glycolytic_process,_and_NADPH_regeneration


id: CL:1973
description: Glycolytic process, and NADPH regeneration
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:1973_Glycolytic_process,_and_NADPH_regeneration


id: CL:198
description: Mixed, incl. Ribosomal large subunit assembly, and Translation protein SH3-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:198_Mixed,_incl._Ribosomal_large_subunit_assembly,_and_Translation_protein_SH3-like_domain_superfamily


id: CL:2004
description: Zinc-binding dehydrogenase, and Carbon utilization
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2004_Zinc-binding_dehydrogenase,_and_Carbon_utilization


id: CL:2026
description: Mixed, incl. Inositol phosphate metabolism, and Methylmalonate-semialdehyde dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2026_Mixed,_incl._Inositol_phosphate_metabolism,_and_Methylmalonate-semialdehyde_dehydrogenase


id: CL:2029
description: Inositol metabolic process, and Methylmalonate-semialdehyde dehydrogenase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2029_Inositol_metabolic_process,_and_Methylmalonate-semialdehyde_dehydrogenase


id: CL:2032
description: Inositol metabolic process, and 5-Dehydro-2-deoxygluconokinase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2032_Inositol_metabolic_process,_and_5-Dehydro-2-deoxygluconokinase


id: CL:2060
description: KR domain, and Sugar/inositol transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2060_KR_domain,_and_Sugar/inositol_transporter


id: CL:2074
description: Import across plasma membrane, and DeoR C terminal sensor domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2074_Import_across_plasma_membrane,_and_DeoR_C_terminal_sensor_domain


id: CL:2094
description: Import across plasma membrane, and PGBD superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2094_Import_across_plasma_membrane,_and_PGBD_superfamily


id: CL:2105
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2105_Mixed,_incl._D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD-binding_domain,_and_Carbohydrate_kinase,_FGGY

description:
  Mixed, incl. D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain, and Carbohydrate kinase, FGGY


id: CL:2108
description: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain, and Serine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2108_D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD-binding_domain,_and_Serine_biosynthesis


id: CL:2110
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2110_D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD-binding_domain_conserved_site,_and_D-isomer_specific_2-hydroxyacid_dehydrogenase,_NAD-binding_domain_conserved_site_1

description:
  D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site, and D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1


id: CL:2122
description: L-serine biosynthetic process, and Deacetylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2122_L-serine_biosynthetic_process,_and_Deacetylase_activity


id: CL:2146
description: Mixed, incl. Organic cation transport, and Organic cation transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2146_Mixed,_incl._Organic_cation_transport,_and_Organic_cation_transmembrane_transporter_activity


id: CL:2161
description: Biosynthesis of amino acids, and Pyridoxal phosphate binding
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2161_Biosynthesis_of_amino_acids,_and_Pyridoxal_phosphate_binding


id: CL:2163
description: Branched-chain amino acid metabolic process, and Sulfur amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2163_Branched-chain_amino_acid_metabolic_process,_and_Sulfur_amino_acid_metabolic_process


id: CL:2165
description: Valine, leucine and isoleucine biosynthesis, and 2-isopropylmalate synthase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2165_Valine,_leucine_and_isoleucine_biosynthesis,_and_2-isopropylmalate_synthase_activity


id: CL:2166
description: Leucine metabolic process, and Valine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2166_Leucine_metabolic_process,_and_Valine_metabolic_process


id: CL:2169
description: Leucine biosynthesis, and ACT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2169_Leucine_biosynthesis,_and_ACT_domain


id: CL:218
description: Small ribosomal subunit, and K Homology domain, type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:218_Small_ribosomal_subunit,_and_K_Homology_domain,_type_2


id: CL:2194
description: Valine, leucine and isoleucine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2194_Valine,_leucine_and_isoleucine_biosynthesis


id: CL:2215
description: Sulfur amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2215_Sulfur_amino_acid_metabolic_process


id: CL:2217
description: Sulfur amino acid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2217_Sulfur_amino_acid_metabolic_process


id: CL:2220
description: Methylenetetrahydrofolate reductase (NAD(P)H) activity, and S-methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2220_Methylenetetrahydrofolate_reductase_(NAD(P)H)_activity,_and_S-methyltransferase_activity


id: CL:2248
description: Cysteine biosynthetic process, and tRNA synthetases class I (I, L, M and V)
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2248_Cysteine_biosynthetic_process,_and_tRNA_synthetases_class_I_(I,_L,_M_and_V)


id: CL:2260
description: Phenylalanine, tyrosine and tryptophan biosynthesis, and Histidine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2260_Phenylalanine,_tyrosine_and_tryptophan_biosynthesis,_and_Histidine_biosynthesis


id: CL:2261
description: Aromatic amino acid family biosynthetic process, and ADC synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2261_Aromatic_amino_acid_family_biosynthetic_process,_and_ADC_synthase


id: CL:2263
description: Aromatic amino acid family biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2263_Aromatic_amino_acid_family_biosynthetic_process


id: CL:2289
description: Tryptophan biosynthetic process, and ADC synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2289_Tryptophan_biosynthetic_process,_and_ADC_synthase


id: CL:2320
description: Mixed, incl. Lysine biosynthesis, and Arginine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2320_Mixed,_incl._Lysine_biosynthesis,_and_Arginine_biosynthesis


id: CL:2322
description: Mixed, incl. Lysine biosynthesis, and Arginine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2322_Mixed,_incl._Lysine_biosynthesis,_and_Arginine_biosynthesis


id: CL:2323
description: Mixed, incl. Diaminopimelate metabolic process, and Arginine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2323_Mixed,_incl._Diaminopimelate_metabolic_process,_and_Arginine_metabolic_process


id: CL:2324
description: Lysine biosynthesis, and Arginine metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2324_Lysine_biosynthesis,_and_Arginine_metabolic_process


id: CL:2325
description: Lysine biosynthesis, and ACT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2325_Lysine_biosynthesis,_and_ACT_domain


id: CL:2326
description: Lysine biosynthesis, and ACT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2326_Lysine_biosynthesis,_and_ACT_domain


id: CL:2347
description: Flavodoxin-like fold, and Lysine decarboxylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2347_Flavodoxin-like_fold,_and_Lysine_decarboxylase_activity


id: CL:2356
description: Arginine metabolic process, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2356_Arginine_metabolic_process,_and_Acetyltransferase_(GNAT)_domain


id: CL:2379
description: Peptidase M20, and Aminotransferases, class-I, pyridoxal-phosphate-binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2379_Peptidase_M20,_and_Aminotransferases,_class-I,_pyridoxal-phosphate-binding_site


id: CL:238
description: Mixed, incl. Ribosomal protein L31, and Elongation factor
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:238_Mixed,_incl._Ribosomal_protein_L31,_and_Elongation_factor


id: CL:2393
description: Mixed, incl. Polyamine metabolic process, and Ureohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2393_Mixed,_incl._Polyamine_metabolic_process,_and_Ureohydrolase


id: CL:2395
description: Polyamine biosynthesis, and Carbon-nitrogen hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2395_Polyamine_biosynthesis,_and_Carbon-nitrogen_hydrolase


id: CL:2425
description: Alanine metabolic process, and Purine catabolism PurC-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2425_Alanine_metabolic_process,_and_Purine_catabolism_PurC-like_domain


id: CL:2444
description: Mixed, incl. Sulfur relay system, and AI-2E family transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2444_Mixed,_incl._Sulfur_relay_system,_and_AI-2E_family_transporter


id: CL:2445
description: Mixed, incl. Sulfur relay system, and AI-2E family transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2445_Mixed,_incl._Sulfur_relay_system,_and_AI-2E_family_transporter


id: CL:2447
description: Iron-sulfur cluster assembly, and Transcription regulator Rrf2
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2447_Iron-sulfur_cluster_assembly,_and_Transcription_regulator_Rrf2


id: CL:2470
description: Mixed, incl. histidine-tRNA ligase activity, and AI-2E family transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2470_Mixed,_incl._histidine-tRNA_ligase_activity,_and_AI-2E_family_transporter


id: CL:2483
description: Mixed, incl. Lytic endotransglycosylase activity, and Peptidase U32
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2483_Mixed,_incl._Lytic_endotransglycosylase_activity,_and_Peptidase_U32


id: CL:2497
description: Mixed, incl. Polysaccharide metabolic process, and Amino sugar and nucleotide sugar metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2497_Mixed,_incl._Polysaccharide_metabolic_process,_and_Amino_sugar_and_nucleotide_sugar_metabolism


id: CL:2498
description: Mixed, incl. Polysaccharide metabolic process, and Amino sugar and nucleotide sugar metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2498_Mixed,_incl._Polysaccharide_metabolic_process,_and_Amino_sugar_and_nucleotide_sugar_metabolism


id: CL:2499
description: Mixed, incl. Polysaccharide metabolic process, and Amino sugar and nucleotide sugar metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2499_Mixed,_incl._Polysaccharide_metabolic_process,_and_Amino_sugar_and_nucleotide_sugar_metabolism


id: CL:2500
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Polysaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2500_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Polysaccharide_metabolic_process


id: CL:2501
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyltransferase 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2501_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyltransferase_2-like


id: CL:2503
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyltransferase 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2503_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyltransferase_2-like


id: CL:2504
description: Mixed, incl. O-Antigen nucleotide sugar biosynthesis, and Glycosyltransferase 2-like
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2504_Mixed,_incl._O-Antigen_nucleotide_sugar_biosynthesis,_and_Glycosyltransferase_2-like


id: CL:2507
description: Mixed, incl. Glycosyltransferase 2-like, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2507_Mixed,_incl._Glycosyltransferase_2-like,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:2509
description: Mixed, incl. Glycosyltransferase 2-like, and O-Antigen nucleotide sugar biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2509_Mixed,_incl._Glycosyltransferase_2-like,_and_O-Antigen_nucleotide_sugar_biosynthesis


id: CL:2510
description: Mixed, incl. Glycosyltransferase 2-like, and Polyketide sugar unit biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2510_Mixed,_incl._Glycosyltransferase_2-like,_and_Polyketide_sugar_unit_biosynthesis


id: CL:2511
description: Mixed, incl. Polyketide sugar unit biosynthesis, and Extracellular polysaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2511_Mixed,_incl._Polyketide_sugar_unit_biosynthesis,_and_Extracellular_polysaccharide_metabolic_process


id: CL:2512
description: Mixed, incl. Polyketide sugar unit biosynthesis, and Phosphoglucosamine mutase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2512_Mixed,_incl._Polyketide_sugar_unit_biosynthesis,_and_Phosphoglucosamine_mutase_activity


id: CL:2515
description: Polyketide sugar unit biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2515_Polyketide_sugar_unit_biosynthesis


id: CL:2526
description: Phosphoglucosamine mutase activity, and Nucleotidyl transferase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2526_Phosphoglucosamine_mutase_activity,_and_Nucleotidyl_transferase_domain


id: CL:253
description: Mixed, incl. UTP metabolic process, and Translation elongation factor EF1B/ribosomal protein S6
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:253_Mixed,_incl._UTP_metabolic_process,_and_Translation_elongation_factor_EF1B/ribosomal_protein_S6


id: CL:2536
description: Protein tyrosine kinase activity, and SLBB domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2536_Protein_tyrosine_kinase_activity,_and_SLBB_domain


id: CL:2547
description: Methionine biosynthesis protein MetW, and Glycosyltransferase like family 2
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2547_Methionine_biosynthesis_protein_MetW,_and_Glycosyltransferase_like_family_2


id: CL:2565
description: Galactose metabolic process, and NAD-dependent epimerase/dehydratase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2565_Galactose_metabolic_process,_and_NAD-dependent_epimerase/dehydratase


id: CL:2582
description: Mixed, incl. Mannosylation, and UDP binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2582_Mixed,_incl._Mannosylation,_and_UDP_binding_domain


id: CL:2598
description: Mixed, incl. Acylneuraminate cytidylyltransferase, and Peptidyl-serine acetylation
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2598_Mixed,_incl._Acylneuraminate_cytidylyltransferase,_and_Peptidyl-serine_acetylation


id: CL:2601
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2601_Mixed,_incl._Haloacid_dehalogenase-like_hydrolase,_and_Lipopolysaccharide_core_region_metabolic_process

description:
  Mixed, incl. Haloacid dehalogenase-like hydrolase, and Lipopolysaccharide core region metabolic process


id: CL:2625
description: Mixed, incl. FAD dependent protein, and Diadenylate cyclase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2625_Mixed,_incl._FAD_dependent_protein,_and_Diadenylate_cyclase_activity


id: CL:2646
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2646_Mixed,_incl._Lipopolysaccharide_biosynthesis,_and_Glycosyltransferase_subfamily_4-like,_N-terminal_domain

description:
  Mixed, incl. Lipopolysaccharide biosynthesis, and Glycosyltransferase subfamily 4-like, N-terminal domain


id: CL:2649
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2649_Mixed,_incl._Glycosyltransferase_subfamily_4-like,_N-terminal_domain,_and_Glycosyl_transferase,_family_9

description:
  Mixed, incl. Glycosyltransferase subfamily 4-like, N-terminal domain, and Glycosyl transferase, family 9


id: CL:2651
description: Glycosyltransferase subfamily 4-like, N-terminal domain, and Glycosyl transferase, family 9
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2651_Glycosyltransferase_subfamily_4-like,_N-terminal_domain,_and_Glycosyl_transferase,_family_9


id: CL:2681
description: Glucan metabolic process, and Amino acid/polyamine transporter I
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2681_Glucan_metabolic_process,_and_Amino_acid/polyamine_transporter_I


id: CL:2682
description: Glucan metabolic process, and Carbohydrate phosphorylase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2682_Glucan_metabolic_process,_and_Carbohydrate_phosphorylase


id: CL:2706
description: Amino acid/polyamine transporter I, and Glycosyl hydrolase, all-beta
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2706_Amino_acid/polyamine_transporter_I,_and_Glycosyl_hydrolase,_all-beta


id: CL:2721
description: Mixed, incl. NAD(P)-binding domain, and Amidine-lyase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2721_Mixed,_incl._NAD(P)-binding_domain,_and_Amidine-lyase_activity


id: CL:2736
description: NodB homology domain, and Chitinase II
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2736_NodB_homology_domain,_and_Chitinase_II


id: CL:2747
description: Mixed, incl. CoA-binding, and Stringent response
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2747_Mixed,_incl._CoA-binding,_and_Stringent_response


id: CL:2763
description: Mixed, incl. Domain in cystathionine beta-synthase and other proteins., and MutM-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2763_Mixed,_incl._Domain_in_cystathionine_beta-synthase_and_other_proteins.,_and_MutM-like,_N-terminal


id: CL:2764
description: Mixed, incl. Domain in cystathionine beta-synthase and other proteins., and Ribosome biogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2764_Mixed,_incl._Domain_in_cystathionine_beta-synthase_and_other_proteins.,_and_Ribosome_biogenesis


id: CL:2767
description: Mixed, incl. AAA domain, and K Homology domain, type 2
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2767_Mixed,_incl._AAA_domain,_and_K_Homology_domain,_type_2


id: CL:2787
description: Mixed, incl. MutM-like, N-terminal, and Copper amine oxidase N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2787_Mixed,_incl._MutM-like,_N-terminal,_and_Copper_amine_oxidase_N-terminal_domain


id: CL:2802
description: Mixed, incl. Alditol metabolic process, and Cytochrome complex
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2802_Mixed,_incl._Alditol_metabolic_process,_and_Cytochrome_complex


id: CL:2803
description: Mixed, incl. Alditol metabolic process, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2803_Mixed,_incl._Alditol_metabolic_process,_and_4Fe-4S_dicluster_domain


id: CL:2806
description: glycerol-3-phosphate metabolic process, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2806_glycerol-3-phosphate_metabolic_process,_and_4Fe-4S_dicluster_domain


id: CL:2808
description: glycerol-3-phosphate dehydrogenase (quinone) activity, and 4Fe-4S dicluster domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2808_glycerol-3-phosphate_dehydrogenase_(quinone)_activity,_and_4Fe-4S_dicluster_domain


id: CL:281
description: RNA polymerase, and Transcription antitermination
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:281_RNA_polymerase,_and_Transcription_antitermination


id: CL:2839
description: Cytochrome complex, and Oligopeptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2839_Cytochrome_complex,_and_Oligopeptide_transport


id: CL:2854
description: Mixed, incl. Organic hydroxy compound biosynthetic process, and Quinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2854_Mixed,_incl._Organic_hydroxy_compound_biosynthetic_process,_and_Quinone_metabolic_process


id: CL:2856
description: Mixed, incl. Thiamine biosynthetic process, and Menaquinone biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2856_Mixed,_incl._Thiamine_biosynthetic_process,_and_Menaquinone_biosynthesis


id: CL:2858
description: Menaquinone biosynthesis, and Ubiquinone metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2858_Menaquinone_biosynthesis,_and_Ubiquinone_metabolic_process


id: CL:2897
description: Vitamin B6 metabolic process, and pyrroline-5-carboxylate reductase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2897_Vitamin_B6_metabolic_process,_and_pyrroline-5-carboxylate_reductase_activity


id: CL:2914
description: Mixed, incl. ATP cone domain, and Ribonucleoside-triphosphate reductase activating, anaerobic
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2914_Mixed,_incl._ATP_cone_domain,_and_Ribonucleoside-triphosphate_reductase_activating,_anaerobic


id: CL:2915
description: Mixed, incl. ATP cone domain, and Ribonucleoside-triphosphate reductase activating, anaerobic
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2915_Mixed,_incl._ATP_cone_domain,_and_Ribonucleoside-triphosphate_reductase_activating,_anaerobic


id: CL:2917
description: ATP cone domain, and Adenosine deaminase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2917_ATP_cone_domain,_and_Adenosine_deaminase_activity


id: CL:2934
description: Mixed, incl. Deoxyribonucleoside monophosphate metabolic process, and Stringent response
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2934_Mixed,_incl._Deoxyribonucleoside_monophosphate_metabolic_process,_and_Stringent_response


id: CL:2949
description: Mixed, incl. Folate biosynthesis, and Organic cyclic compound catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2949_Mixed,_incl._Folate_biosynthesis,_and_Organic_cyclic_compound_catabolic_process


id: CL:2950
description: Mixed, incl. Folate biosynthesis, and Organic cyclic compound catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2950_Mixed,_incl._Folate_biosynthesis,_and_Organic_cyclic_compound_catabolic_process


id: CL:2951
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2951_Mixed,_incl._Folate_biosynthesis,_and_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor

description:
  Mixed, incl. Folate biosynthesis, and Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor


id: CL:2952
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2952_Mixed,_incl._Folate_biosynthesis,_and_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor

description:
  Mixed, incl. Folate biosynthesis, and Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor


id: CL:2954
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2954_Mixed,_incl._Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor,_and_[2Fe-2S]-binding

description:
  Mixed, incl. Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor, and [2Fe-2S]-binding


id: CL:2956
description: Oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor, and [2Fe-2S]-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2956_Oxidoreductase_activity,_acting_on_CH_or_CH2_groups,_NAD_or_NADP_as_acceptor,_and_[2Fe-2S]-binding


id: CL:2973
description: Mixed, incl. CGCAxxGCC motif, and Xenobiotic catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2973_Mixed,_incl._CGCAxxGCC_motif,_and_Xenobiotic_catabolic_process


id: CL:2990
description: Molybdopterin cofactor metabolic process, and Molybdopterin oxidoreductase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2990_Molybdopterin_cofactor_metabolic_process,_and_Molybdopterin_oxidoreductase


id: CL:2993
description: Molybdopterin cofactor metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:2993_Molybdopterin_cofactor_metabolic_process


id: CL:3008
description: Molybdopterin oxidoreductase, and Peptide binding
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3008_Molybdopterin_oxidoreductase,_and_Peptide_binding


id: CL:3023
description: Mixed, incl. Sugar transporter, conserved site, and Alkaloid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3023_Mixed,_incl._Sugar_transporter,_conserved_site,_and_Alkaloid_catabolic_process


id: CL:3025
description: Mixed, incl. Alkaloid catabolic process, and ApbE-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3025_Mixed,_incl._Alkaloid_catabolic_process,_and_ApbE-like_superfamily


id: CL:3045
description: C4-dicarboxylate transmembrane transporter activity, and Peptidase M20, dimerisation domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3045_C4-dicarboxylate_transmembrane_transporter_activity,_and_Peptidase_M20,_dimerisation_domain


id: CL:306
description: Mixed, incl. PUA domain superfamily, and Ribosomal protein L7Ae/L30e/S12e/Gadd45
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:306_Mixed,_incl._PUA_domain_superfamily,_and_Ribosomal_protein_L7Ae/L30e/S12e/Gadd45


id: CL:3062
description: Mixed, incl. Nickel cation binding, and ATPase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3062_Mixed,_incl._Nickel_cation_binding,_and_ATPase_complex


id: CL:3065
description: ATPase complex, and Nickel cation binding
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3065_ATPase_complex,_and_Nickel_cation_binding


id: CL:3088
description: Mixed, incl. Oxo-acid-lyase activity, and Organic acid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3088_Mixed,_incl._Oxo-acid-lyase_activity,_and_Organic_acid_catabolic_process


id: CL:3089
description: Mixed, incl. Metal-dependent hydrolase, and Cellular modified amino acid catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3089_Mixed,_incl._Metal-dependent_hydrolase,_and_Cellular_modified_amino_acid_catabolic_process


id: CL:3091
description: Mixed, incl. Formamide metabolic process, and 4-hydroxyproline metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3091_Mixed,_incl._Formamide_metabolic_process,_and_4-hydroxyproline_metabolic_process


id: CL:3093
description: Mixed, incl. Formamide metabolic process, and Helix-turn-helix protein RpiR
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3093_Mixed,_incl._Formamide_metabolic_process,_and_Helix-turn-helix_protein_RpiR


id: CL:3128
description: Mixed, incl. Oxaloacetate decarboxylase activity, and Citrate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3128_Mixed,_incl._Oxaloacetate_decarboxylase_activity,_and_Citrate_transport


id: CL:3149
description: Mixed, incl. acetyl-CoA metabolic process, and Methylaspartate mutase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3149_Mixed,_incl._acetyl-CoA_metabolic_process,_and_Methylaspartate_mutase_activity


id: CL:3150
description: Mixed, incl. acetyl-CoA metabolic process, and Methylaspartate mutase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3150_Mixed,_incl._acetyl-CoA_metabolic_process,_and_Methylaspartate_mutase_activity


id: CL:3152
description: acetyl-CoA metabolic process, and Citrate lyase acyl carrier protein CitD
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3152_acetyl-CoA_metabolic_process,_and_Citrate_lyase_acyl_carrier_protein_CitD


id: CL:3174
description: Glutamate catabolic process, and MutL protein
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3174_Glutamate_catabolic_process,_and_MutL_protein


id: CL:3189
description: Mixed, incl. Aldonic acid metabolic process, and Phosphodiesterase MJ0936/Vps29
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3189_Mixed,_incl._Aldonic_acid_metabolic_process,_and_Phosphodiesterase_MJ0936/Vps29


id: CL:3205
description: Mixed, incl. Cation transmembrane transport, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3205_Mixed,_incl._Cation_transmembrane_transport,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:3206
description: Mixed, incl. Heavy metal-associated domain superfamily, and Potassium ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3206_Mixed,_incl._Heavy_metal-associated_domain_superfamily,_and_Potassium_ion_transport


id: CL:3208
description: Mixed, incl. Heavy metal-associated domain superfamily, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3208_Mixed,_incl._Heavy_metal-associated_domain_superfamily,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:321
description: ATP synthesis, and Adenylate kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:321_ATP_synthesis,_and_Adenylate_kinase_activity


id: CL:3210
description: Heavy-metal-associated domain, and HTH ArsR-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3210_Heavy-metal-associated_domain,_and_HTH_ArsR-type_DNA-binding_domain


id: CL:3212
description: Heavy-metal-associated domain, and Haloacid dehalogenase-like hydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3212_Heavy-metal-associated_domain,_and_Haloacid_dehalogenase-like_hydrolase


id: CL:3224
description: HTH ArsR-type DNA-binding domain, and P-type ATPase, subfamily IB
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3224_HTH_ArsR-type_DNA-binding_domain,_and_P-type_ATPase,_subfamily_IB


id: CL:3247
description: Potassium ion transport, and Cation/H+ exchanger
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3247_Potassium_ion_transport,_and_Cation/H+_exchanger


id: CL:3249
description: Cation/H+ exchanger, and Potassium/proton antiporter subunit KhtT
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3249_Cation/H+_exchanger,_and_Potassium/proton_antiporter_subunit_KhtT


id: CL:3276
description: Mixed, incl. Cytochrome complex assembly, and Protein of unknown function DUF881
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3276_Mixed,_incl._Cytochrome_complex_assembly,_and_Protein_of_unknown_function_DUF881


id: CL:3278
description: Cytochrome complex assembly, and Redoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3278_Cytochrome_complex_assembly,_and_Redoxin


id: CL:3295
description: Mixed, incl. Regulation of RNA stability, and DNA polymerase alpha chain like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3295_Mixed,_incl._Regulation_of_RNA_stability,_and_DNA_polymerase_alpha_chain_like_domain


id: CL:3323
description: Mixed, incl. Signaling, and Cilium
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3323_Mixed,_incl._Signaling,_and_Cilium


id: CL:3327
description: Signaling, and PAS domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3327_Signaling,_and_PAS_domain_superfamily


id: CL:3328
description: Signaling, and Nucleotide cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3328_Signaling,_and_Nucleotide_cyclase


id: CL:3332
description: Phosphorelay signal transduction system, and Nucleotide cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3332_Phosphorelay_signal_transduction_system,_and_Nucleotide_cyclase


id: CL:3334
description: His Kinase A (phosphoacceptor) domain, and OmpR/PhoB-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3334_His_Kinase_A_(phosphoacceptor)_domain,_and_OmpR/PhoB-type_DNA-binding_domain


id: CL:3336
description: Mixed, incl. His Kinase A (phosphoacceptor) domain, and OmpR/PhoB-type DNA-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3336_Mixed,_incl._His_Kinase_A_(phosphoacceptor)_domain,_and_OmpR/PhoB-type_DNA-binding_domain


id: CL:3338
description: PAS domain, and Two-component regulatory system
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3338_PAS_domain,_and_Two-component_regulatory_system


id: CL:3347
description: EAL domain, and PAS-associated, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3347_EAL_domain,_and_PAS-associated,_C-terminal


id: CL:3366
description: Mixed, incl. PAS fold-4, and Demethylation
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3366_Mixed,_incl._PAS_fold-4,_and_Demethylation


id: CL:3428
description: Transducer, and CheW-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3428_Transducer,_and_CheW-like_domain


id: CL:3438
description: Taxis, and Protein-glutamate O-methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3438_Taxis,_and_Protein-glutamate_O-methyltransferase_activity


id: CL:3442
description: CheW-like domain, and Demethylation
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3442_CheW-like_domain,_and_Demethylation


id: CL:3477
description: Histidine kinase, and Helix_turn_helix, Lux Regulon
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3477_Histidine_kinase,_and_Helix_turn_helix,_Lux_Regulon


id: CL:3488
description: HD-GYP domain, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3488_HD-GYP_domain,_and_Diguanylate_cyclase


id: CL:349
description: Mixed, incl. RNA helicase activity, and S1 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:349_Mixed,_incl._RNA_helicase_activity,_and_S1_domain


id: CL:3490
description: HD-GYP domain, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3490_HD-GYP_domain,_and_Diguanylate_cyclase


id: CL:3493
description: HD-GYP domain, and Diguanylate cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3493_HD-GYP_domain,_and_Diguanylate_cyclase


id: CL:350
description: Mixed, incl. RNA helicase activity, and Peptidyl-proline modification
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:350_Mixed,_incl._RNA_helicase_activity,_and_Peptidyl-proline_modification


id: CL:351
description: RNA helicase activity, and Peptidyl-proline modification
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:351_RNA_helicase_activity,_and_Peptidyl-proline_modification


id: CL:3523
description: RNA polymerase sigma factor 54 interaction domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3523_RNA_polymerase_sigma_factor_54_interaction_domain


id: CL:3528
description: RNA polymerase sigma factor 54 interaction domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3528_RNA_polymerase_sigma_factor_54_interaction_domain


id: CL:3543
description: Flagellar assembly, and Bacterial-type flagellum organization
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3543_Flagellar_assembly,_and_Bacterial-type_flagellum_organization


id: CL:3551
description: Bacterial flagellum, and Bacterial flagellum protein export
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3551_Bacterial_flagellum,_and_Bacterial_flagellum_protein_export


id: CL:3552
description: Bacterial flagellum, and Bacterial flagellum protein export
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3552_Bacterial_flagellum,_and_Bacterial_flagellum_protein_export


id: CL:3553
description: Bacterial-type flagellum-dependent cell motility
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3553_Bacterial-type_flagellum-dependent_cell_motility


id: CL:3555
description: Bacterial-type flagellum basal body, rod, and Flagellar hook capping protein
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3555_Bacterial-type_flagellum_basal_body,_rod,_and_Flagellar_hook_capping_protein


id: CL:3573
description: Bacterial flagellum protein export, and Protein targeting
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3573_Bacterial_flagellum_protein_export,_and_Protein_targeting


id: CL:3583
description: Bacterial-type flagellum basal body, distal rod, and Flagellar basal-body rod FlgF
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3583_Bacterial-type_flagellum_basal_body,_distal_rod,_and_Flagellar_basal-body_rod_FlgF


id: CL:3599
description: Bacterial-type flagellum hook, and Flagellar hook capping protein
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3599_Bacterial-type_flagellum_hook,_and_Flagellar_hook_capping_protein


id: CL:3611
description: CheC-like superfamily, and FliG C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3611_CheC-like_superfamily,_and_FliG_C-terminal_domain


id: CL:3624
description: Flagellin, and Bacterial-type flagellum assembly
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3624_Flagellin,_and_Bacterial-type_flagellum_assembly


id: CL:364
description: Mixed, incl. Pseudouridine synthase, RluC/RluD, and Negative regulation of translation
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:364_Mixed,_incl._Pseudouridine_synthase,_RluC/RluD,_and_Negative_regulation_of_translation


id: CL:3648
description: STAS domain, and Protein serine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3648_STAS_domain,_and_Protein_serine_kinase_activity


id: CL:3663
description: Mixed, incl. Cell division protein FtsA, and Flagellar assembly protein A
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3663_Mixed,_incl._Cell_division_protein_FtsA,_and_Flagellar_assembly_protein_A


id: CL:3684
description: Mixed, incl. Regulation of cell division, and Regulation of cell death
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3684_Mixed,_incl._Regulation_of_cell_division,_and_Regulation_of_cell_death


id: CL:3686
description: Regulation of cell division, and SAF domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3686_Regulation_of_cell_division,_and_SAF_domain


id: CL:3708
description: DNA binding HTH domain, AraC-type, and Histidine kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3708_DNA_binding_HTH_domain,_AraC-type,_and_Histidine_kinase


id: CL:3710
description: DNA binding HTH domain, AraC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3710_DNA_binding_HTH_domain,_AraC-type


id: CL:3713
description: Transcription regulator HTH, AraC- type, and DNA binding HTH domain, AraC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3713_Transcription_regulator_HTH,_AraC-_type,_and_DNA_binding_HTH_domain,_AraC-type


id: CL:3740
description: Histidine kinase, and CdaR, GGDEF-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3740_Histidine_kinase,_and_CdaR,_GGDEF-like_domain


id: CL:376
description: Exoribonuclease activity, and Hydroxyethylthiazole kinase family
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:376_Exoribonuclease_activity,_and_Hydroxyethylthiazole_kinase_family


id: CL:3762
description: Bacterial microcompartment, and ANTAR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3762_Bacterial_microcompartment,_and_ANTAR_domain


id: CL:3765
description: CcmK-like superfamily, and Diol metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3765_CcmK-like_superfamily,_and_Diol_metabolic_process


id: CL:3781
description: Diol metabolic process, and Bacterial microcompartment (BMC) circularly permuted domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3781_Diol_metabolic_process,_and_Bacterial_microcompartment_(BMC)_circularly_permuted_domain


id: CL:3795
description: Mixed, incl. Ethanolamine ammonia-lyase complex, and ANTAR domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3795_Mixed,_incl._Ethanolamine_ammonia-lyase_complex,_and_ANTAR_domain


id: CL:3809
description: Mixed, incl. Alpha/beta hydrolase family, and Cache domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3809_Mixed,_incl._Alpha/beta_hydrolase_family,_and_Cache_domain


id: CL:3821
description: Mixed, incl. Bordetella uptake gene, and SpoOB, alpha-helical domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3821_Mixed,_incl._Bordetella_uptake_gene,_and_SpoOB,_alpha-helical_domain


id: CL:3823
description: Bordetella uptake gene, and SpoOB, alpha-helical domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3823_Bordetella_uptake_gene,_and_SpoOB,_alpha-helical_domain


id: CL:3825
description: Bordetella uptake gene, and Carbohydrate binding
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3825_Bordetella_uptake_gene,_and_Carbohydrate_binding


id: CL:3829
description: Bordetella uptake gene, and Carbohydrate binding
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3829_Bordetella_uptake_gene,_and_Carbohydrate_binding


id: CL:3848
description: SpoOB, alpha-helical domain, and Signal transduction response regulator, citrate/malate metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3848_SpoOB,_alpha-helical_domain,_and_Signal_transduction_response_regulator,_citrate/malate_metabolism


id: CL:3866
description: Bordetella uptake gene, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3866_Bordetella_uptake_gene,_and_Signal


id: CL:3885
description: Mixed, incl. Extracellular region, and Signal
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3885_Mixed,_incl._Extracellular_region,_and_Signal


id: CL:3886
description: Mostly uncharacterized, incl. Hydrolase activity, acting on ester bonds, and Pore complex
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3886_Mostly_uncharacterized,_incl._Hydrolase_activity,_acting_on_ester_bonds,_and_Pore_complex


id: CL:3888
description: Mostly uncharacterized, incl. Pore complex, and Starch and sucrose metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3888_Mostly_uncharacterized,_incl._Pore_complex,_and_Starch_and_sucrose_metabolism


id: CL:3889
description: Mostly uncharacterized, incl. Pore complex, and Glycoside hydrolase/deacetylase, beta/alpha-barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3889_Mostly_uncharacterized,_incl._Pore_complex,_and_Glycoside_hydrolase/deacetylase,_beta/alpha-barrel


id: CL:3891
description: Mostly uncharacterized, incl. FHA domain, and Protein dephosphorylation
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3891_Mostly_uncharacterized,_incl._FHA_domain,_and_Protein_dephosphorylation


id: CL:3893
description: Mixed, incl. Protein dephosphorylation, and FHA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3893_Mixed,_incl._Protein_dephosphorylation,_and_FHA_domain


id: CL:3895
description: Mixed, incl. Protein dephosphorylation, and FHA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3895_Mixed,_incl._Protein_dephosphorylation,_and_FHA_domain


id: CL:390
description: Aminoacyl-tRNA biosynthesis, and OBG-type guanine nucleotide-binding (G) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:390_Aminoacyl-tRNA_biosynthesis,_and_OBG-type_guanine_nucleotide-binding_(G)_domain


id: CL:3919
description: Mostly uncharacterized, incl. FHA domain, and Peptidoglycan L,D-transpeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3919_Mostly_uncharacterized,_incl._FHA_domain,_and_Peptidoglycan_L,D-transpeptidase_activity


id: CL:3921
description: Mostly uncharacterized, incl. Metalloendopeptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3921_Mostly_uncharacterized,_incl._Metalloendopeptidase_activity


id: CL:3946
description: Mixed, incl. Chitin synthase, and Chitin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3946_Mixed,_incl._Chitin_synthase,_and_Chitin_binding


id: CL:3948
description: Mixed, incl. Chitin synthase, and Chitin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3948_Mixed,_incl._Chitin_synthase,_and_Chitin_binding


id: CL:395
description: Aminoacyl-tRNA synthetase, class Ia, anticodon-binding, and lysyl-tRNA aminoacylation
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:395_Aminoacyl-tRNA_synthetase,_class_Ia,_anticodon-binding,_and_lysyl-tRNA_aminoacylation


id: CL:3978
description: Mixed, incl. B3/4 domain, and LysE type translocator
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3978_Mixed,_incl._B3/4_domain,_and_LysE_type_translocator


id: CL:3994
description: Mixed, incl. SbmA/BacA-like family, and NUDIX hydrolase-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3994_Mixed,_incl._SbmA/BacA-like_family,_and_NUDIX_hydrolase-like_domain_superfamily


id: CL:3996
description: SbmA/BacA-like family, and Beta-lactamase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:3996_SbmA/BacA-like_family,_and_Beta-lactamase_activity


id: CL:4012
description: Mixed, incl. Helix-hairpin-helix motif, and PHP domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4012_Mixed,_incl._Helix-hairpin-helix_motif,_and_PHP_domain


id: CL:4024
description: Mixed, incl. Extracellular space, and Collagen binding
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4024_Mixed,_incl._Extracellular_space,_and_Collagen_binding


id: CL:4026
description: Mixed, incl. Extracellular space, and Bacterial invasion of epithelial cells
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4026_Mixed,_incl._Extracellular_space,_and_Bacterial_invasion_of_epithelial_cells


id: CL:4028
description: Mixed, incl. Extracellular space, and Bacterial invasion of epithelial cells
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4028_Mixed,_incl._Extracellular_space,_and_Bacterial_invasion_of_epithelial_cells


id: CL:4029
description: Mixed, incl. Extracellular space, and Bacterial invasion of epithelial cells
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4029_Mixed,_incl._Extracellular_space,_and_Bacterial_invasion_of_epithelial_cells


id: CL:4031
description: Tumour necrosis factor-like domain superfamily, and Collagen binding
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4031_Tumour_necrosis_factor-like_domain_superfamily,_and_Collagen_binding


id: CL:4033
description: Collagen triple helix repeat (20 copies), and Extracellular space
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4033_Collagen_triple_helix_repeat_(20_copies),_and_Extracellular_space


id: CL:4060
description: Mixed, incl. Serine protease, and Taxis
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4060_Mixed,_incl._Serine_protease,_and_Taxis


id: CL:4090
description: Mixed, incl. Bacterial secretion system, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4090_Mixed,_incl._Bacterial_secretion_system,_and_Pilus_organization


id: CL:4091
description: Mixed, incl. Bacterial secretion system, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4091_Mixed,_incl._Bacterial_secretion_system,_and_Pilus_organization


id: CL:4092
description: Bacterial secretion system, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4092_Bacterial_secretion_system,_and_Pilus_organization


id: CL:4094
description: Mixed, incl. Horizontal gene transfer, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4094_Mixed,_incl._Horizontal_gene_transfer,_and_Pilus_organization


id: CL:4097
description: Pilus organization, and Establishment of competence for transformation
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4097_Pilus_organization,_and_Establishment_of_competence_for_transformation


id: CL:4098
description: Establishment of competence for transformation, and Pilus organization
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4098_Establishment_of_competence_for_transformation,_and_Pilus_organization


id: CL:4100
description: Type II/IV secretion system protein, and GspF/PilC family
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4100_Type_II/IV_secretion_system_protein,_and_GspF/PilC_family


id: CL:4114
description: Establishment of competence for transformation, and SLBB domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4114_Establishment_of_competence_for_transformation,_and_SLBB_domain


id: CL:4140
description: Horizontal gene transfer, and tRNA endonuclease-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4140_Horizontal_gene_transfer,_and_tRNA_endonuclease-like_domain_superfamily


id: CL:4159
description: Mixed, incl. NolW-like superfamily, and Sister chromatid cohesion
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4159_Mixed,_incl._NolW-like_superfamily,_and_Sister_chromatid_cohesion


id: CL:4172
description: Mixed, incl. Queuosine metabolic process, and Lactate racemase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4172_Mixed,_incl._Queuosine_metabolic_process,_and_Lactate_racemase_activity


id: CL:4173
description: Mixed, incl. Queuosine metabolic process, and Mannosylation
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4173_Mixed,_incl._Queuosine_metabolic_process,_and_Mannosylation


id: CL:4175
description: Mixed, incl. Mannosylation, and GTP cyclohydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4175_Mixed,_incl._Mannosylation,_and_GTP_cyclohydrolase_activity


id: CL:4196
description: Lactate racemase activity, and PurE domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4196_Lactate_racemase_activity,_and_PurE_domain


id: CL:4210
description: Mixed, incl. Cell differentiation, and Ribonuclease activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4210_Mixed,_incl._Cell_differentiation,_and_Ribonuclease_activity


id: CL:4211
description: Mixed, incl. Cell differentiation, and Protease
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4211_Mixed,_incl._Cell_differentiation,_and_Protease


id: CL:4213
description: Mixed, incl. Cell differentiation, and Protease
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4213_Mixed,_incl._Cell_differentiation,_and_Protease


id: CL:4214
description: Mixed, incl. Cell differentiation, and Serine hydrolase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4214_Mixed,_incl._Cell_differentiation,_and_Serine_hydrolase_activity


id: CL:4216
description: Mixed, incl. Cell differentiation, and Protein of unknown function DUF1256
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4216_Mixed,_incl._Cell_differentiation,_and_Protein_of_unknown_function_DUF1256


id: CL:4217
description: Cell differentiation, and Protein of unknown function DUF1256
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4217_Cell_differentiation,_and_Protein_of_unknown_function_DUF1256


id: CL:4219
description: Cell differentiation, and Protein of unknown function DUF1256
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4219_Cell_differentiation,_and_Protein_of_unknown_function_DUF1256


id: CL:4220
description: Cell differentiation, and Protein of unknown function DUF1256
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4220_Cell_differentiation,_and_Protein_of_unknown_function_DUF1256


id: CL:4223
description: Cell differentiation, and Protein of unknown function DUF1256
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4223_Cell_differentiation,_and_Protein_of_unknown_function_DUF1256


id: CL:4230
description: Mixed, incl. RNA polymerase sigma-70 region 4, and SpoIVB peptidase S55
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4230_Mixed,_incl._RNA_polymerase_sigma-70_region_4,_and_SpoIVB_peptidase_S55


id: CL:4231
description: Mixed, incl. RNA polymerase sigma-70 region 4, and Asexual sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4231_Mixed,_incl._RNA_polymerase_sigma-70_region_4,_and_Asexual_sporulation


id: CL:424
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:424_glutaminyl-tRNA_synthase_(glutamine-hydrolyzing)_activity,_and_Aminoacyl-tRNA_synthetase,_class_II_(D/K/N)

description:
  glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity, and Aminoacyl-tRNA synthetase, class II (D/K/N)


id: CL:4242
description: Mixed, incl. SpoIVB peptidase S55, and Activator
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4242_Mixed,_incl._SpoIVB_peptidase_S55,_and_Activator


id: CL:4259
description: Stage III sporulation protein AC/AD family, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4259_Stage_III_sporulation_protein_AC/AD_family,_and_Sporulation


id: CL:4261
description: Stage III sporulation protein AC/AD family, and Sporulation
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4261_Stage_III_sporulation_protein_AC/AD_family,_and_Sporulation


id: CL:4298
description: SpoVA, and Bacillus/Clostridium Ger spore germination protein
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4298_SpoVA,_and_Bacillus/Clostridium_Ger_spore_germination_protein


id: CL:433
description: Mixed, incl. Protein-transporting ATPase activity, and Queuosine biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:433_Mixed,_incl._Protein-transporting_ATPase_activity,_and_Queuosine_biosynthesis


id: CL:434
description: Mixed, incl. Queuosine biosynthesis, and Holliday junction helicase complex
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:434_Mixed,_incl._Queuosine_biosynthesis,_and_Holliday_junction_helicase_complex


id: CL:4342
description: Mostly uncharacterized, incl. Sporulation stage II, protein P, and Stage II sporulation protein
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4342_Mostly_uncharacterized,_incl._Sporulation_stage_II,_protein_P,_and_Stage_II_sporulation_protein


id: CL:4344
description: Mixed, incl. Sporulation stage II, protein P, and Stage II sporulation protein
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4344_Mixed,_incl._Sporulation_stage_II,_protein_P,_and_Stage_II_sporulation_protein


id: CL:4347
description: Mixed, incl. Shikimate / quinate 5-dehydrogenase, and Sporulation stage II, protein P
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4347_Mixed,_incl._Shikimate_/_quinate_5-dehydrogenase,_and_Sporulation_stage_II,_protein_P


id: CL:437
description: Holliday junction helicase complex, and Stage II sporulation protein
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:437_Holliday_junction_helicase_complex,_and_Stage_II_sporulation_protein


id: CL:4375
description: Mixed, incl. Spore wall, and Nucleotide-diphospho-sugar transferases
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4375_Mixed,_incl._Spore_wall,_and_Nucleotide-diphospho-sugar_transferases


id: CL:4392
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4392_Mostly_uncharacterized,_incl._Uncharacterized_membrane_protein_YkvI,_and_CoA_enzyme_activase_uncharacterised_domain_(DUF2229)

description:
  Mostly uncharacterized, incl. Uncharacterized membrane protein YkvI, and CoA enzyme activase uncharacterised domain (DUF2229)


id: CL:4393
description: Mixed, incl. Uncharacterized membrane protein YkvI, and Amino acid permease/ SLC12A domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4393_Mixed,_incl._Uncharacterized_membrane_protein_YkvI,_and_Amino_acid_permease/_SLC12A_domain


id: CL:4395
description: Mixed, incl. DHH family, and Toxin activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4395_Mixed,_incl._DHH_family,_and_Toxin_activity


id: CL:4397
description: Mixed, incl. Uncharacterized membrane protein YkvI
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4397_Mixed,_incl._Uncharacterized_membrane_protein_YkvI


id: CL:4422
description: Mixed, incl. CoA enzyme activase uncharacterised domain (DUF2229), and GHMP kinases C terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4422_Mixed,_incl._CoA_enzyme_activase_uncharacterised_domain_(DUF2229),_and_GHMP_kinases_C_terminal


id: CL:4423
description: Mixed, incl. FAD dependent oxidoreductase, and 2Fe-2S ferredoxin, iron-sulphur binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4423_Mixed,_incl._FAD_dependent_oxidoreductase,_and_2Fe-2S_ferredoxin,_iron-sulphur_binding_site


id: CL:4436
description: Mixed, incl. CoA enzyme activase uncharacterised domain (DUF2229), and GHMP kinases C terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4436_Mixed,_incl._CoA_enzyme_activase_uncharacterised_domain_(DUF2229),_and_GHMP_kinases_C_terminal


id: CL:4447
description: Mixed, incl. Putative TM nitroreductase, and rRNA pseudouridine synthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4447_Mixed,_incl._Putative_TM_nitroreductase,_and_rRNA_pseudouridine_synthesis


id: CL:4468
description: Mixed, incl. CxxC-x17-CxxC domain, and PhoU-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4468_Mixed,_incl._CxxC-x17-CxxC_domain,_and_PhoU-like_domain_superfamily


id: CL:4469
description: CxxC-x17-CxxC domain, and RNA (guanine-N7)-methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4469_CxxC-x17-CxxC_domain,_and_RNA_(guanine-N7)-methylation


id: CL:4480
description: Mixed, incl. PhoU-like domain superfamily, and SASP, alpha/beta-type superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4480_Mixed,_incl._PhoU-like_domain_superfamily,_and_SASP,_alpha/beta-type_superfamily


id: CL:4489
description: Mixed, incl. Peptidoglycan metabolic process, and 2-deoxyribonucleotide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4489_Mixed,_incl._Peptidoglycan_metabolic_process,_and_2-deoxyribonucleotide_metabolic_process


id: CL:4490
description: Mixed, incl. Peptidoglycan metabolic process, and 2-deoxyribonucleotide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4490_Mixed,_incl._Peptidoglycan_metabolic_process,_and_2-deoxyribonucleotide_metabolic_process


id: CL:4491
description: Mixed, incl. Peptidoglycan metabolic process, and SipL, SPOCS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4491_Mixed,_incl._Peptidoglycan_metabolic_process,_and_SipL,_SPOCS_domain


id: CL:4493
description: Mixed, incl. Peptidoglycan metabolic process, and Beta-lactamase, class-A
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4493_Mixed,_incl._Peptidoglycan_metabolic_process,_and_Beta-lactamase,_class-A


id: CL:4495
description: Mixed, incl. Beta-lactamase/transpeptidase-like, and Peptidoglycan muralytic activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4495_Mixed,_incl._Beta-lactamase/transpeptidase-like,_and_Peptidoglycan_muralytic_activity


id: CL:4496
description: PGBD superfamily, and Peptidoglycan muralytic activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4496_PGBD_superfamily,_and_Peptidoglycan_muralytic_activity


id: CL:4499
description: PGBD superfamily, and Cysteine-type peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4499_PGBD_superfamily,_and_Cysteine-type_peptidase_activity


id: CL:4520
description: Penicillin-binding protein 5, C-terminal domain, and Nucleoside recognition
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4520_Penicillin-binding_protein_5,_C-terminal_domain,_and_Nucleoside_recognition


id: CL:4543
description: Mixed, incl. 3D domain, and G5 domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4543_Mixed,_incl._3D_domain,_and_G5_domain


id: CL:4544
description: 3D domain, and Peptidoglycan-protein cross-linking
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4544_3D_domain,_and_Peptidoglycan-protein_cross-linking


id: CL:455
description: Protein-transporting ATPase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:455_Protein-transporting_ATPase_activity


id: CL:4559
description: Mixed, incl. G5 domain, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4559_Mixed,_incl._G5_domain,_and_Sigma-70,_region_4


id: CL:4575
description: Mixed, incl. 2-deoxyribonucleotide metabolic process, and LysM domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4575_Mixed,_incl._2-deoxyribonucleotide_metabolic_process,_and_LysM_domain


id: CL:4576
description: Mixed, incl. 2-deoxyribonucleotide metabolic process, and Ribonucleotide catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4576_Mixed,_incl._2-deoxyribonucleotide_metabolic_process,_and_Ribonucleotide_catabolic_process


id: CL:4589
description: Mixed, incl. LysM domain, and OstA-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4589_Mixed,_incl._LysM_domain,_and_OstA-like_protein


id: CL:4598
description: Mixed, incl. LysM domain, and UTP metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4598_Mixed,_incl._LysM_domain,_and_UTP_metabolic_process


id: CL:4600
description: Mixed, incl. LysM domain, and UvrB, interaction domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4600_Mixed,_incl._LysM_domain,_and_UvrB,_interaction_domain


id: CL:4619
description: Mixed, incl. tRNA threonylcarbamoyladenosine modification, and ComA-like, MBL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4619_Mixed,_incl._tRNA_threonylcarbamoyladenosine_modification,_and_ComA-like,_MBL_domain


id: CL:4620
description: tRNA threonylcarbamoyladenosine modification, and Acetyltransferase (GNAT) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4620_tRNA_threonylcarbamoyladenosine_modification,_and_Acetyltransferase_(GNAT)_domain


id: CL:4631
description: Mixed, incl. ComA-like, MBL domain, and Ribbon-helix-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4631_Mixed,_incl._ComA-like,_MBL_domain,_and_Ribbon-helix-helix


id: CL:4648
description: Mixed, incl. Radical SAM, alpha/beta horseshoe, and Non-homologous end-joining
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4648_Mixed,_incl._Radical_SAM,_alpha/beta_horseshoe,_and_Non-homologous_end-joining


id: CL:4649
description: Mixed, incl. Radical SAM, alpha/beta horseshoe, and Non-homologous end-joining
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4649_Mixed,_incl._Radical_SAM,_alpha/beta_horseshoe,_and_Non-homologous_end-joining


id: CL:4650
description: Mixed, incl. Radical SAM, alpha/beta horseshoe, and Non-homologous end-joining
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4650_Mixed,_incl._Radical_SAM,_alpha/beta_horseshoe,_and_Non-homologous_end-joining


id: CL:4651
description: Mixed, incl. Non-homologous end-joining, and Cobalamin (vitamin B12)-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4651_Mixed,_incl._Non-homologous_end-joining,_and_Cobalamin_(vitamin_B12)-binding_domain


id: CL:4653
description: Non-homologous end-joining, and ELP3/YhcC
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4653_Non-homologous_end-joining,_and_ELP3/YhcC


id: CL:4663
description: Mixed, incl. Protein of unknown function DUF421, and Cyclic nucleotide-monophosphate binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4663_Mixed,_incl._Protein_of_unknown_function_DUF421,_and_Cyclic_nucleotide-monophosphate_binding_domain


id: CL:4672
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4672_Radical_SAM,_alpha/beta_horseshoe,_and_NO_signalling/Golgi_transport_ligand-binding_domain_superfamily

description:
  Radical SAM, alpha/beta horseshoe, and NO signalling/Golgi transport ligand-binding domain superfamily


id: CL:468
description: Mixed, incl. Protein folding, and Oxidoreductase activity, acting on a sulfur group of donors
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:468_Mixed,_incl._Protein_folding,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: CL:4684
description: Mixed, incl. Beta-ketoacyl synthase, N-terminal domain, and B12 binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4684_Mixed,_incl._Beta-ketoacyl_synthase,_N-terminal_domain,_and_B12_binding_domain


id: CL:469
description: Mixed, incl. Protein folding, and Oxidoreductase activity, acting on a sulfur group of donors
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:469_Mixed,_incl._Protein_folding,_and_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors


id: CL:4699
description: Mixed, incl. Sigma-70, region 4, and DNA glycosylase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4699_Mixed,_incl._Sigma-70,_region_4,_and_DNA_glycosylase


id: CL:471
description: Protein folding, and ATP-dependent peptidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:471_Protein_folding,_and_ATP-dependent_peptidase_activity


id: CL:4711
description: Mixed, incl. Transcription regulator HTH, GntR, and Cupin 2, conserved barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4711_Mixed,_incl._Transcription_regulator_HTH,_GntR,_and_Cupin_2,_conserved_barrel


id: CL:4712
description: Mixed, incl. Transcription regulator HTH, GntR, and GNAT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4712_Mixed,_incl._Transcription_regulator_HTH,_GntR,_and_GNAT_domain


id: CL:4714
description: Mixed, incl. GntR, C-terminal, and Cold shock, CspA
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4714_Mixed,_incl._GntR,_C-terminal,_and_Cold_shock,_CspA


id: CL:4715
description: GntR, C-terminal, and Citrate transport
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4715_GntR,_C-terminal,_and_Citrate_transport


id: CL:4724
description: Mixed, incl. Cold shock, CspA, and Zinc ribbon, NADH pyrophosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4724_Mixed,_incl._Cold_shock,_CspA,_and_Zinc_ribbon,_NADH_pyrophosphatase


id: CL:473
description: Protein folding, and Proteolysis involved in protein catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:473_Protein_folding,_and_Proteolysis_involved_in_protein_catabolic_process


id: CL:4741
description: Mixed, incl. Anaerobilin synthase HutW, and D-Arginine and D-ornithine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4741_Mixed,_incl._Anaerobilin_synthase_HutW,_and_D-Arginine_and_D-ornithine_metabolism


id: CL:4757
description: Mixed, incl. AhpD-like, and Monooxygenase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4757_Mixed,_incl._AhpD-like,_and_Monooxygenase


id: CL:4766
description: Mixed, incl. Porphyrin and chlorophyll metabolism, and Nitroreductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4766_Mixed,_incl._Porphyrin_and_chlorophyll_metabolism,_and_Nitroreductase-like


id: CL:4767
description: Mixed, incl. Tetrapyrrole biosynthetic process, and Nitroreductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4767_Mixed,_incl._Tetrapyrrole_biosynthetic_process,_and_Nitroreductase-like


id: CL:4768
description: Tetrapyrrole biosynthetic process, and Nitroreductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4768_Tetrapyrrole_biosynthetic_process,_and_Nitroreductase-like


id: CL:4769
description: Tetrapyrrole biosynthetic process, and Nitroreductase-like
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4769_Tetrapyrrole_biosynthetic_process,_and_Nitroreductase-like


id: CL:4770
description: Tetrapyrrole biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4770_Tetrapyrrole_biosynthetic_process


id: CL:4772
description: Cobalamin metabolic process, and Porphyrin biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4772_Cobalamin_metabolic_process,_and_Porphyrin_biosynthesis


id: CL:4778
description: Protein alkylation, and Cobalamin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4778_Protein_alkylation,_and_Cobalamin_metabolic_process


id: CL:4794
description: CobB/CobQ-like glutamine amidotransferase, and Histidinol-phosphate transaminase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4794_CobB/CobQ-like_glutamine_amidotransferase,_and_Histidinol-phosphate_transaminase_activity


id: CL:4810
description: Phosphoribosyltransferase, and Cobalamin-5-phosphate synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4810_Phosphoribosyltransferase,_and_Cobalamin-5-phosphate_synthase


id: CL:4841
description: Magnesium chelatase activity, and Protein of unknown function DUF456
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4841_Magnesium_chelatase_activity,_and_Protein_of_unknown_function_DUF456


id: CL:485
description: Protein folding chaperone, and DnaJ domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:485_Protein_folding_chaperone,_and_DnaJ_domain


id: CL:4851
description: Nitroreductase-like, and Uroporphyrinogen decarboxylase (URO-D)
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4851_Nitroreductase-like,_and_Uroporphyrinogen_decarboxylase_(URO-D)


id: CL:4874
description: Uroporphyrinogen decarboxylase (URO-D), and Methanogenesis
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4874_Uroporphyrinogen_decarboxylase_(URO-D),_and_Methanogenesis


id: CL:4888
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4888_Mixed,_incl._ECF_transporter,_substrate-specific_component,_and_Phosphoribosylglycinamide_formyltransferase_activity

description:
  Mixed, incl. ECF transporter, substrate-specific component, and Phosphoribosylglycinamide formyltransferase activity


id: CL:4902
description: Mixed, incl. RuBisCO, and Peptidase M42
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4902_Mixed,_incl._RuBisCO,_and_Peptidase_M42


id: CL:4922
description: Mixed, incl. Toxin metabolic process, and AsnC-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4922_Mixed,_incl._Toxin_metabolic_process,_and_AsnC-type_HTH_domain


id: CL:4925
description: Toxin metabolic process, and AsnC-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4925_Toxin_metabolic_process,_and_AsnC-type_HTH_domain


id: CL:4927
description: Toxin metabolic process, and AsnC-type helix-turn-helix domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4927_Toxin_metabolic_process,_and_AsnC-type_helix-turn-helix_domain


id: CL:4939
description: Mixed, incl. Response to acid chemical, and Coenzyme PQQ synthesis protein E-like
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4939_Mixed,_incl._Response_to_acid_chemical,_and_Coenzyme_PQQ_synthesis_protein_E-like


id: CL:4951
description: Mixed, incl. Monooxygenase, and Solute:cation symporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4951_Mixed,_incl._Monooxygenase,_and_Solute:cation_symporter_activity


id: CL:4966
description: Mixed, incl. beta-Lactam resistance, and MarR-type HTH domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4966_Mixed,_incl._beta-Lactam_resistance,_and_MarR-type_HTH_domain


id: CL:4967
description: Mixed, incl. beta-Lactam resistance, and Glycerophospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4967_Mixed,_incl._beta-Lactam_resistance,_and_Glycerophospholipid_metabolism


id: CL:4969
description: Mixed, incl. Prevention of phagosomal-lysosomal fusion, and Glycerophospholipid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4969_Mixed,_incl._Prevention_of_phagosomal-lysosomal_fusion,_and_Glycerophospholipid_metabolism


id: CL:4970
description: Mixed, incl. Glycerophospholipid metabolism, and Major facilitator superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4970_Mixed,_incl._Glycerophospholipid_metabolism,_and_Major_facilitator_superfamily


id: CL:4971
description: Glycerophospholipid metabolism, and DNA methylation on cytosine
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4971_Glycerophospholipid_metabolism,_and_DNA_methylation_on_cytosine


id: CL:4974
description: Transmembrane protein TMEM64, and Ribosomal RNA adenine methylase transferase, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4974_Transmembrane_protein_TMEM64,_and_Ribosomal_RNA_adenine_methylase_transferase,_conserved_site


id: CL:4988
description: DNA methylation on cytosine, and Cardiolipin metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:4988_DNA_methylation_on_cytosine,_and_Cardiolipin_metabolic_process


id: CL:5000
description: Mixed, incl. Drug resistance transporter EmrB-like, and TIM-barrel domain, IGPS-like
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5000_Mixed,_incl._Drug_resistance_transporter_EmrB-like,_and_TIM-barrel_domain,_IGPS-like


id: CL:5003
description: Sugar (and other) transporter, and Transmembrane secretion effector
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5003_Sugar_(and_other)_transporter,_and_Transmembrane_secretion_effector


id: CL:5018
description: TIM-barrel domain, IGPS-like, and Transcription regulators MarR/SlyA-like
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5018_TIM-barrel_domain,_IGPS-like,_and_Transcription_regulators_MarR/SlyA-like


id: CL:5027
description: Mixed, incl. Transmembrane secretion effector, and Ubiquinone
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5027_Mixed,_incl._Transmembrane_secretion_effector,_and_Ubiquinone


id: CL:5045
description: Mixed, incl. DNA-binding HTH domain, TetR-type, and Methyltransferase domain 25
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5045_Mixed,_incl._DNA-binding_HTH_domain,_TetR-type,_and_Methyltransferase_domain_25


id: CL:5046
description: Mixed, incl. Methyltransferase domain 25, and Isoprenoid metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5046_Mixed,_incl._Methyltransferase_domain_25,_and_Isoprenoid_metabolic_process


id: CL:5047
description: Mixed, incl. Mycolic acid cyclopropane synthetase, and Ribonuclease J
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5047_Mixed,_incl._Mycolic_acid_cyclopropane_synthetase,_and_Ribonuclease_J


id: CL:5060
description: Mixed, incl. Armadillo-type fold, and Transcription cis-regulatory region binding
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5060_Mixed,_incl._Armadillo-type_fold,_and_Transcription_cis-regulatory_region_binding


id: CL:5069
description: DNA-binding HTH domain, TetR-type, conserved site, and CoA enzyme activase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5069_DNA-binding_HTH_domain,_TetR-type,_conserved_site,_and_CoA_enzyme_activase


id: CL:507
description: Peptidase M41, and Peptidase M16, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:507_Peptidase_M41,_and_Peptidase_M16,_N-terminal


id: CL:5071
description: DNA-binding HTH domain, TetR-type, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5071_DNA-binding_HTH_domain,_TetR-type,_conserved_site


id: CL:5083
description: CoA enzyme activase, and DNA-binding HTH domain, TetR-type
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5083_CoA_enzyme_activase,_and_DNA-binding_HTH_domain,_TetR-type


id: CL:5092
description: Mixed, incl. MarR-type HTH domain, and Response to virus
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5092_Mixed,_incl._MarR-type_HTH_domain,_and_Response_to_virus


id: CL:5093
description: Mixed, incl. Response to virus, and Protein PafC
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5093_Mixed,_incl._Response_to_virus,_and_Protein_PafC


id: CL:5095
description: Mixed, incl. Protein PafC, and Conserved hypothetical protein CHP02453
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5095_Mixed,_incl._Protein_PafC,_and_Conserved_hypothetical_protein_CHP02453


id: CL:5097
description: Mixed, incl. Protein PafC, and Conserved hypothetical protein CHP02453
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5097_Mixed,_incl._Protein_PafC,_and_Conserved_hypothetical_protein_CHP02453


id: CL:5098
description: Protein PafC, and ATP-dependent DNA helicase RecG/Transcription-repair-coupling factor
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5098_Protein_PafC,_and_ATP-dependent_DNA_helicase_RecG/Transcription-repair-coupling_factor


id: CL:5107
description: Conserved hypothetical protein CHP02453, and Protein PafC
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5107_Conserved_hypothetical_protein_CHP02453,_and_Protein_PafC


id: CL:5134
description: Response to virus, and Putative cyclase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5134_Response_to_virus,_and_Putative_cyclase


id: CL:5158
description: Mixed, incl. MarR-type HTH domain, and Flavin reductase like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5158_Mixed,_incl._MarR-type_HTH_domain,_and_Flavin_reductase_like_domain


id: CL:5160
description: Mixed, incl. MarR-type HTH domain, and Ferrous iron binding
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5160_Mixed,_incl._MarR-type_HTH_domain,_and_Ferrous_iron_binding


id: CL:5162
description: Mixed, incl. Transcriptional regulator MarR-type, conserved site, and Ferrous iron binding
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5162_Mixed,_incl._Transcriptional_regulator_MarR-type,_conserved_site,_and_Ferrous_iron_binding


id: CL:5201
description: Mixed, incl. Cell outer membrane, and Cationic antimicrobial peptide (CAMP) resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5201_Mixed,_incl._Cell_outer_membrane,_and_Cationic_antimicrobial_peptide_(CAMP)_resistance


id: CL:5202
description: Mixed, incl. Cell outer membrane, and Cationic antimicrobial peptide (CAMP) resistance
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5202_Mixed,_incl._Cell_outer_membrane,_and_Cationic_antimicrobial_peptide_(CAMP)_resistance


id: CL:5203
description: Mixed, incl. Cell outer membrane, and Liposaccharide metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5203_Mixed,_incl._Cell_outer_membrane,_and_Liposaccharide_metabolic_process


id: CL:5204
description: Mixed, incl. Liposaccharide metabolic process, and Lipid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5204_Mixed,_incl._Liposaccharide_metabolic_process,_and_Lipid_transport


id: CL:5205
description: Mixed, incl. Lipopolysaccharide biosynthesis, and Lipid transport
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5205_Mixed,_incl._Lipopolysaccharide_biosynthesis,_and_Lipid_transport


id: CL:5207
description: Lipopolysaccharide biosynthesis, and Lipopolysaccharide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5207_Lipopolysaccharide_biosynthesis,_and_Lipopolysaccharide_transport


id: CL:521
description: Oxidoreductase activity, acting on a sulfur group of donors, and Peroxiredoxin, AhpC-type
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:521_Oxidoreductase_activity,_acting_on_a_sulfur_group_of_donors,_and_Peroxiredoxin,_AhpC-type


id: CL:5210
description: Lipid A biosynthesis, and Lipopolysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5210_Lipid_A_biosynthesis,_and_Lipopolysaccharide_biosynthesis


id: CL:5223
description: Lipopolysaccharide biosynthesis, and SIS domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5223_Lipopolysaccharide_biosynthesis,_and_SIS_domain


id: CL:523
description: Peroxiredoxin, AhpC-type, and Hydrogen peroxide
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:523_Peroxiredoxin,_AhpC-type,_and_Hydrogen_peroxide


id: CL:5237
description: Lipopolysaccharide transport, and ATP-binding cassette (ABC) transporter complex
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5237_Lipopolysaccharide_transport,_and_ATP-binding_cassette_(ABC)_transporter_complex


id: CL:5247
description: Mixed, incl. Lipid transport, and S-layer homology domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5247_Mixed,_incl._Lipid_transport,_and_S-layer_homology_domain


id: CL:5248
description: Mixed, incl. S-layer homology domain, and Membrane organization
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5248_Mixed,_incl._S-layer_homology_domain,_and_Membrane_organization


id: CL:5250
description: Membrane organization, and SpoIVB peptidase S55
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5250_Membrane_organization,_and_SpoIVB_peptidase_S55


id: CL:5267
description: Phospholipid transport, and Sigma-70, region 4
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5267_Phospholipid_transport,_and_Sigma-70,_region_4


id: CL:5277
description: Mixed, incl. Adenosylcobinamide amidohydrolase, and TonB, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5277_Mixed,_incl._Adenosylcobinamide_amidohydrolase,_and_TonB,_C-terminal


id: CL:5293
description: TonB-dependent receptor-like, and TonB, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5293_TonB-dependent_receptor-like,_and_TonB,_C-terminal


id: CL:5294
description: TonB-dependent receptor-like, and TonB, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5294_TonB-dependent_receptor-like,_and_TonB,_C-terminal


id: CL:5296
description: TonB-dependent receptor-like, and TonB, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5296_TonB-dependent_receptor-like,_and_TonB,_C-terminal


id: CL:5300
description: TonB-dependent receptor, plug domain superfamily, and TonB, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5300_TonB-dependent_receptor,_plug_domain_superfamily,_and_TonB,_C-terminal


id: CL:5303
description: Mixed, incl. TonB, C-terminal, and Pore complex
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5303_Mixed,_incl._TonB,_C-terminal,_and_Pore_complex


id: CL:5333
description: Siderophore transport, and PepSY-associated TM region
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5333_Siderophore_transport,_and_PepSY-associated_TM_region


id: CL:5353
description: Mixed, incl. Biopolymer transport protein ExbD/TolR, and SbmA/BacA-like family
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5353_Mixed,_incl._Biopolymer_transport_protein_ExbD/TolR,_and_SbmA/BacA-like_family


id: CL:5362
description: Mixed, incl. RND efflux pump, membrane fusion protein, and ABC3 transporter permease protein domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5362_Mixed,_incl._RND_efflux_pump,_membrane_fusion_protein,_and_ABC3_transporter_permease_protein_domain


id: CL:5364
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5364_Mixed,_incl._RND_efflux_pump,_membrane_fusion_protein,_and_Multidrug_efflux_transporter_AcrB_TolC_docking_domain,_DN/DC_subdomains

description:
  Mixed, incl. RND efflux pump, membrane fusion protein, and Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains


id: CL:5366
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5366_Multidrug_efflux_transporter_AcrB_TolC_docking_domain,_DN/DC_subdomains,_and_Outer_membrane_efflux_protein

description:
  Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains, and Outer membrane efflux protein


id: CL:5368
description: MMPL family, and Cyclolysin transport protein CyaE
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5368_MMPL_family,_and_Cyclolysin_transport_protein_CyaE


id: CL:5382
description: Outer membrane efflux protein, and RND efflux pump, membrane fusion protein
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5382_Outer_membrane_efflux_protein,_and_RND_efflux_pump,_membrane_fusion_protein


id: CL:5400
description: Mixed, incl. MacB-like periplasmic core domain, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5400_Mixed,_incl._MacB-like_periplasmic_core_domain,_and_MacB,_ATP-binding_domain


id: CL:5402
description: RND efflux pump, membrane fusion protein, and MacB-like periplasmic core domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5402_RND_efflux_pump,_membrane_fusion_protein,_and_MacB-like_periplasmic_core_domain


id: CL:5434
description: Mixed, incl. ABC3 transporter permease protein domain, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5434_Mixed,_incl._ABC3_transporter_permease_protein_domain,_and_MacB,_ATP-binding_domain


id: CL:5436
description: Mixed, incl. MacB-like periplasmic core domain, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5436_Mixed,_incl._MacB-like_periplasmic_core_domain,_and_MacB,_ATP-binding_domain


id: CL:5440
description: MacB-like periplasmic core domain, and MacB, ATP-binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5440_MacB-like_periplasmic_core_domain,_and_MacB,_ATP-binding_domain


id: CL:5462
description: Mixed, incl. Protein of unknown function DUF2292, and Protein of unknown function DUF4418
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5462_Mixed,_incl._Protein_of_unknown_function_DUF2292,_and_Protein_of_unknown_function_DUF4418


id: CL:5473
description: Mixed, incl. Alpha/Beta hydrolase fold, and Protein of unknown function DUF4127
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5473_Mixed,_incl._Alpha/Beta_hydrolase_fold,_and_Protein_of_unknown_function_DUF4127


id: CL:5474
description: Mixed, incl. Protein of unknown function DUF4127, and Alpha/Beta hydrolase fold
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5474_Mixed,_incl._Protein_of_unknown_function_DUF4127,_and_Alpha/Beta_hydrolase_fold


id: CL:5476
description: Mixed, incl. Esterase, Ig-like N-terminal, and Prolyl oligopeptidase family
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5476_Mixed,_incl._Esterase,_Ig-like_N-terminal,_and_Prolyl_oligopeptidase_family


id: CL:548
description: Mixed, incl. Cyclic nucleotide-binding domain, and Biosynthesis of vancomycin group antibiotics
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:548_Mixed,_incl._Cyclic_nucleotide-binding_domain,_and_Biosynthesis_of_vancomycin_group_antibiotics


id: CL:549
description: Mixed, incl. Biosynthesis of vancomycin group antibiotics, and Tetratricopeptide repeats
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:549_Mixed,_incl._Biosynthesis_of_vancomycin_group_antibiotics,_and_Tetratricopeptide_repeats


id: CL:5492
description: Protein of unknown function DUF4127, and Alkaline phosphatase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5492_Protein_of_unknown_function_DUF4127,_and_Alkaline_phosphatase_activity


id: CL:5501
description: Mixed, incl. Transketolase, N-terminal, and Transketolase binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5501_Mixed,_incl._Transketolase,_N-terminal,_and_Transketolase_binding_site


id: CL:5503
description: Mixed, incl. Transketolase, N-terminal, and Transketolase binding site
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5503_Mixed,_incl._Transketolase,_N-terminal,_and_Transketolase_binding_site


id: CL:551
description: Tetratricopeptide repeats, and Glycerol kinase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:551_Tetratricopeptide_repeats,_and_Glycerol_kinase


id: CL:5520
description: Mixed, incl. Periplasmic binding protein, and ABC transporter, permease protein, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5520_Mixed,_incl._Periplasmic_binding_protein,_and_ABC_transporter,_permease_protein,_BtuC-like


id: CL:5521
description: Mixed, incl. Periplasmic binding protein, and ABC transporter, permease protein, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5521_Mixed,_incl._Periplasmic_binding_protein,_and_ABC_transporter,_permease_protein,_BtuC-like


id: CL:5522
description: Mixed, incl. Periplasmic binding protein, and ABC transporter, permease protein, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5522_Mixed,_incl._Periplasmic_binding_protein,_and_ABC_transporter,_permease_protein,_BtuC-like


id: CL:5523
description: ABC transporter, permease protein, BtuC-like, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5523_ABC_transporter,_permease_protein,_BtuC-like,_and_Periplasmic_binding_protein


id: CL:5524
description: ABC transporter, permease protein, BtuC-like, and Periplasmic binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5524_ABC_transporter,_permease_protein,_BtuC-like,_and_Periplasmic_binding_protein


id: CL:5525
description: Periplasmic binding protein, and ABC transporter, permease protein, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5525_Periplasmic_binding_protein,_and_ABC_transporter,_permease_protein,_BtuC-like


id: CL:5526
description: Periplasmic binding protein, and ABC transporter, permease protein, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5526_Periplasmic_binding_protein,_and_ABC_transporter,_permease_protein,_BtuC-like


id: CL:5528
description: Periplasmic binding protein, and ABC transporter, permease protein, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5528_Periplasmic_binding_protein,_and_ABC_transporter,_permease_protein,_BtuC-like


id: CL:5551
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5551_Mixed,_incl._Heme_transport,_and_Tetracycline_resistance_protein_TetA/multidrug_resistance_protein_MdtG

description:
  Mixed, incl. Heme transport, and Tetracycline resistance protein TetA/multidrug resistance protein MdtG


id: CL:5564
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5564_Mixed,_incl._ABC_transporter,_permease_protein,_BtuC-like,_and_4Fe-4S_iron_sulfur_cluster_binding_proteins,_NifH/frxC_family

description:
  Mixed, incl. ABC transporter, permease protein, BtuC-like, and 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family


id: CL:5565
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5565_Mixed,_incl._4Fe-4S_iron_sulfur_cluster_binding_proteins,_NifH/frxC_family,_and_ABC_transporter,_permease_protein,_BtuC-like

description:
  Mixed, incl. 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family, and ABC transporter, permease protein, BtuC-like


id: CL:5578
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5578_Mixed,_incl._4Fe-4S_iron_sulfur_cluster_binding_proteins,_NifH/frxC_family,_and_ABC_transporter,_permease_protein,_BtuC-like

description:
  Mixed, incl. 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family, and ABC transporter, permease protein, BtuC-like


id: CL:5591
description: FatB domain, and ABC transporter, permease protein, BtuC-like
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5591_FatB_domain,_and_ABC_transporter,_permease_protein,_BtuC-like


id: CL:5601
description: Mixed, incl. Bacterial extracellular solute-binding protein, and Pore complex
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5601_Mixed,_incl._Bacterial_extracellular_solute-binding_protein,_and_Pore_complex


id: CL:5604
description: Mixed, incl. Putative heavy-metal chelation, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5604_Mixed,_incl._Putative_heavy-metal_chelation,_and_Bacterial_extracellular_solute-binding_protein


id: CL:5627
description: Mostly uncharacterized, incl. Flavoprotein-like superfamily, and ABC-2 type transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5627_Mostly_uncharacterized,_incl._Flavoprotein-like_superfamily,_and_ABC-2_type_transporter


id: CL:5628
description: Mostly uncharacterized, incl. Flavodoxin domain, and ABC-2 type transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5628_Mostly_uncharacterized,_incl._Flavodoxin_domain,_and_ABC-2_type_transporter


id: CL:563
description: Mixed, incl. Metalloenzyme, and RNA polymerase Rpb6
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:563_Mixed,_incl._Metalloenzyme,_and_RNA_polymerase_Rpb6


id: CL:5631
description: Mixed, incl. ABC-2 type transporter, and TonB, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5631_Mixed,_incl._ABC-2_type_transporter,_and_TonB,_C-terminal


id: CL:5651
description: Mixed, incl. Organic cation transport, and NADPH dehydrogenase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5651_Mixed,_incl._Organic_cation_transport,_and_NADPH_dehydrogenase_activity


id: CL:5662
description: Mixed, incl. Peptidase M16, N-terminal, and ABC transporter Uup, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5662_Mixed,_incl._Peptidase_M16,_N-terminal,_and_ABC_transporter_Uup,_C-terminal


id: CL:5675
description: ABC transporters, and Latent infection - Other responses of Mtb to phagocytosis
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5675_ABC_transporters,_and_Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis


id: CL:5676
description: ABC transporters, and Sulfate assimilation
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5676_ABC_transporters,_and_Sulfate_assimilation


id: CL:5677
description: Mixed, incl. ABC-type transporter activity, and MetI-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5677_Mixed,_incl._ABC-type_transporter_activity,_and_MetI-like_superfamily


id: CL:5678
description: Amino acid transport, and Ligand-gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5678_Amino_acid_transport,_and_Ligand-gated_channel_activity


id: CL:5679
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5679_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_ABC-type_amino_acid_transporter_activity

description:
  Amino acid ABC transporter, permease protein, 3-TM domain, and ABC-type amino acid transporter activity


id: CL:5680
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5680_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_ABC-type_amino_acid_transport_system,_ATPase_component,_HisP-type

description:
  Amino acid ABC transporter, permease protein, 3-TM domain, and ABC-type amino acid transport system, ATPase component, HisP-type


id: CL:5682
description: Amino acid ABC transporter, permease protein, 3-TM domain, and Ligand-gated channel activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5682_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Ligand-gated_channel_activity


id: CL:5684
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5684_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_Solute-binding_protein_family_3,_conserved_site

description:
  Amino acid ABC transporter, permease protein, 3-TM domain, and Solute-binding protein family 3, conserved site


id: CL:5714
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5714_Amino_acid_ABC_transporter,_permease_protein,_3-TM_domain,_and_ABC-type_amino_acid_transport_system,_ATPase_component,_HisP-type

description:
  Amino acid ABC transporter, permease protein, 3-TM domain, and ABC-type amino acid transport system, ATPase component, HisP-type


id: CL:5727
description: Mtb iron assimilation by chelation, and ABC-type amino acid transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5727_Mtb_iron_assimilation_by_chelation,_and_ABC-type_amino_acid_transporter_activity


id: CL:574
description: Cyclic nucleotide-binding domain, and Aquaporin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:574_Cyclic_nucleotide-binding_domain,_and_Aquaporin-like


id: CL:5740
description: Mixed, incl. Lipoprotein NlpA family, and NIL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5740_Mixed,_incl._Lipoprotein_NlpA_family,_and_NIL_domain


id: CL:5741
description: Lipoprotein NlpA family, and NIL domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5741_Lipoprotein_NlpA_family,_and_NIL_domain


id: CL:5754
description: Mixed, incl. Mtb iron assimilation by chelation, and Pyruvate phosphate dikinase, AMP/ATP-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5754_Mixed,_incl._Mtb_iron_assimilation_by_chelation,_and_Pyruvate_phosphate_dikinase,_AMP/ATP-binding


id: CL:5767
description: Mixed, incl. Inorganic anion transport, and ABC-type polyamine transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5767_Mixed,_incl._Inorganic_anion_transport,_and_ABC-type_polyamine_transporter_activity


id: CL:5768
description: Mixed, incl. Inorganic anion transport, and ABC-type polyamine transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5768_Mixed,_incl._Inorganic_anion_transport,_and_ABC-type_polyamine_transporter_activity


id: CL:5769
description: Mixed, incl. ABC-type polyamine transporter activity, and Molybdate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5769_Mixed,_incl._ABC-type_polyamine_transporter_activity,_and_Molybdate_ion_transport


id: CL:5770
description: ABC-type polyamine transporter activity, and Molybdate ion transport
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5770_ABC-type_polyamine_transporter_activity,_and_Molybdate_ion_transport


id: CL:5772
description: ABC-type polyamine transporter activity, and Bacterial extracellular solute-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5772_ABC-type_polyamine_transporter_activity,_and_Bacterial_extracellular_solute-binding_protein


id: CL:5794
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5794_Mixed,_incl._Bacterial_extracellular_solute-binding_protein,_and_Molybdate/tungstate_binding,_C-terminal

description:
  Mixed, incl. Bacterial extracellular solute-binding protein, and Molybdate/tungstate binding, C-terminal


id: CL:5808
description: Sulfate transport, and Sulfate assimilation
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5808_Sulfate_transport,_and_Sulfate_assimilation


id: CL:5823
description: Mixed, incl. Phosphate ion transport, and Ppx/GppA phosphatase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5823_Mixed,_incl._Phosphate_ion_transport,_and_Ppx/GppA_phosphatase


id: CL:5825
description: Phosphate ion transport, and Copper amine oxidase-like, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5825_Phosphate_ion_transport,_and_Copper_amine_oxidase-like,_N-terminal


id: CL:5842
description: Organic phosphonate transport, and Amidohydrolase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5842_Organic_phosphonate_transport,_and_Amidohydrolase


id: CL:5852
description: Mixed, incl. Leu/Ile/Val-binding protein, and ABC transporter, permease
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5852_Mixed,_incl._Leu/Ile/Val-binding_protein,_and_ABC_transporter,_permease


id: CL:5856
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5856_ABC_transporter,_permease,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal

description:
  ABC transporter, permease, and Branched-chain amino acid ATP-binding cassette transporter, C-terminal


id: CL:5857
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5857_ABC_transporter,_permease,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal

description:
  ABC transporter, permease, and Branched-chain amino acid ATP-binding cassette transporter, C-terminal


id: CL:5859
description: ABC transporter, permease, and Branched-chain amino acid ATP-binding cassette transporter
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5859_ABC_transporter,_permease,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter


id: CL:586
description: Mixed, incl. Isopentenyl diphosphate metabolic process, and MnmG-related, conserved site
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:586_Mixed,_incl._Isopentenyl_diphosphate_metabolic_process,_and_MnmG-related,_conserved_site


id: CL:5869
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5869_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal,_and_Branched-chain_amino_acid_transport_system_/_permease_component

description:
  Branched-chain amino acid ATP-binding cassette transporter, C-terminal, and Branched-chain amino acid transport system / permease component


id: CL:5878
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5878_Branched-chain_amino_acid_transport,_and_Branched-chain_amino_acid_ATP-binding_cassette_transporter,_C-terminal

description:
  Branched-chain amino acid transport, and Branched-chain amino acid ATP-binding cassette transporter, C-terminal


id: CL:588
description: Mixed, incl. NADPH binding, and De novo CTP biosynthetic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:588_Mixed,_incl._NADPH_binding,_and_De_novo_CTP_biosynthetic_process


id: CL:5890
description: Mixed, incl. ABC-2 family transporter protein, and Ubiquinone binding
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5890_Mixed,_incl._ABC-2_family_transporter_protein,_and_Ubiquinone_binding


id: CL:5892
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5892_Mixed,_incl._ABC-2_family_transporter_protein,_and_Tetracyclin_repressor-like,_C-terminal_domain_superfamily

description:
  Mixed, incl. ABC-2 family transporter protein, and Tetracyclin repressor-like, C-terminal domain superfamily


id: CL:5906
description: Mixed, incl. Putative cyclase, and Beta-ketoacyl synthase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5906_Mixed,_incl._Putative_cyclase,_and_Beta-ketoacyl_synthase


id: CL:5917
description: Mixed, incl. Latent infection - Other responses of Mtb to phagocytosis, and Amide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5917_Mixed,_incl._Latent_infection_-_Other_responses_of_Mtb_to_phagocytosis,_and_Amide_transport


id: CL:5919
description: Mixed, incl. ABC transporter, CbiO/EcfA subunit, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5919_Mixed,_incl._ABC_transporter,_CbiO/EcfA_subunit,_and_Cobalt_transport_protein


id: CL:5920
description: Mixed, incl. Type 1 protein exporter, and Conserved hypothetical CHP02185, integral membrane
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5920_Mixed,_incl._Type_1_protein_exporter,_and_Conserved_hypothetical_CHP02185,_integral_membrane


id: CL:5922
description: Mixed, incl. Conserved hypothetical CHP02185, integral membrane, and Type 1 protein exporter
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5922_Mixed,_incl._Conserved_hypothetical_CHP02185,_integral_membrane,_and_Type_1_protein_exporter


id: CL:5923
description: Mixed, incl. Conserved hypothetical CHP02185, integral membrane, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5923_Mixed,_incl._Conserved_hypothetical_CHP02185,_integral_membrane,_and_Cobalt_transport_protein


id: CL:5934
description: Mixed, incl. Conserved hypothetical CHP02185, integral membrane, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5934_Mixed,_incl._Conserved_hypothetical_CHP02185,_integral_membrane,_and_Cobalt_transport_protein


id: CL:5948
description: Mixed, incl. Conserved hypothetical CHP02185, integral membrane, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5948_Mixed,_incl._Conserved_hypothetical_CHP02185,_integral_membrane,_and_Cobalt_transport_protein


id: CL:5957
description: Mixed, incl. ABC transporter, CbiO/EcfA subunit, and Cobalt transport protein
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5957_Mixed,_incl._ABC_transporter,_CbiO/EcfA_subunit,_and_Cobalt_transport_protein


id: CL:5960
description: ABC transporter, CbiO/EcfA subunit, and BioY family
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5960_ABC_transporter,_CbiO/EcfA_subunit,_and_BioY_family


id: CL:5962
description: BioY family, and ABC transporter, CbiO/EcfA subunit
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5962_BioY_family,_and_ABC_transporter,_CbiO/EcfA_subunit


id: CL:5992
description: Nickel cation transmembrane transporter activity, and Peptide transport
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5992_Nickel_cation_transmembrane_transporter_activity,_and_Peptide_transport


id: CL:5993
description: Peptide transport, and Nickel cation transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5993_Peptide_transport,_and_Nickel_cation_transmembrane_transporter_activity


id: CL:5995
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5995_Oligopeptide/dipeptide_ABC_transporter,_C-terminal,_and_Nickel_cation_transmembrane_transporter_activity

description:
  Oligopeptide/dipeptide ABC transporter, C-terminal, and Nickel cation transmembrane transporter activity


id: CL:5997
description: Oligopeptide/dipeptide ABC transporter, C-terminal, and Peptide transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:5997_Oligopeptide/dipeptide_ABC_transporter,_C-terminal,_and_Peptide_transmembrane_transporter_activity


id: CL:6007
description: Peptide transport, and Nickel cation transmembrane transporter activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6007_Peptide_transport,_and_Nickel_cation_transmembrane_transporter_activity


id: CL:6023
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6023_Mixed,_incl._Solute-binding_protein_family_5,_conserved_site,_and_Oligopeptide_transport_permease_C-like,_N-terminal_domain

description:
  Mixed, incl. Solute-binding protein family 5, conserved site, and Oligopeptide transport permease C-like, N-terminal domain


id: CL:6032
description: Nickel cation transmembrane transporter activity, and Solute-binding protein family 5
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6032_Nickel_cation_transmembrane_transporter_activity,_and_Solute-binding_protein_family_5


id: CL:6034
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6034_N-terminal_TM_domain_of_oligopeptide_transport_permease_C,_and_Solute-binding_protein_family_5,_conserved_site

description:
  N-terminal TM domain of oligopeptide transport permease C, and Solute-binding protein family 5, conserved site


id: CL:6056
description: Mixed, incl. Sulfur metabolism, and Chloroalkane and chloroalkene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6056_Mixed,_incl._Sulfur_metabolism,_and_Chloroalkane_and_chloroalkene_degradation


id: CL:6057
description: Sulfur metabolism, and Chloroalkane and chloroalkene degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6057_Sulfur_metabolism,_and_Chloroalkane_and_chloroalkene_degradation


id: CL:6059
description: Chloroalkane and chloroalkene degradation, and Nitrogen regulatory protein PII
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6059_Chloroalkane_and_chloroalkene_degradation,_and_Nitrogen_regulatory_protein_PII


id: CL:6061
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6061_Oxidoreductase_activity,_acting_on_iron-sulfur_proteins_as_donors,_and_Dinitrogenase_iron-molybdenum_cofactor

description:
  Oxidoreductase activity, acting on iron-sulfur proteins as donors, and Dinitrogenase iron-molybdenum cofactor


id: CL:6063
description: Nitrogenase complex, and NMT1/THI5 like
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6063_Nitrogenase_complex,_and_NMT1/THI5_like


id: CL:6065
description: Nitrogenase complex, and NMT1/THI5 like
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6065_Nitrogenase_complex,_and_NMT1/THI5_like


id: CL:6067
description: Nitrogen fixation, and NMT1/THI5 like
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6067_Nitrogen_fixation,_and_NMT1/THI5_like


id: CL:6106
description: Nitrogen fixation, and Nitrogenase cofactor biosynthesis protein NifB
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6106_Nitrogen_fixation,_and_Nitrogenase_cofactor_biosynthesis_protein_NifB


id: CL:6107
description: Nitrogen fixation, and FeMo cofactor biosynthesis protein NifB, C-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6107_Nitrogen_fixation,_and_FeMo_cofactor_biosynthesis_protein_NifB,_C-terminal


id: CL:6120
description: Nitrogen fixation, and Nitrogenase cofactor biosynthesis protein NifB
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6120_Nitrogen_fixation,_and_Nitrogenase_cofactor_biosynthesis_protein_NifB


id: CL:614
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:614_Mixed,_incl._Positive_regulation_of_gene_expression,_and_Aspartyl/glutamyl-tRNA_amidotransferase_subunit_B-like

description:
  Mixed, incl. Positive regulation of gene expression, and Aspartyl/glutamyl-tRNA amidotransferase subunit B-like


id: CL:6168
description: SsuA/THI5-like, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6168_SsuA/THI5-like,_and_Sulfur_metabolism


id: CL:6169
description: SsuA/THI5-like, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6169_SsuA/THI5-like,_and_Sulfur_metabolism


id: CL:6171
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6171_Mixed,_incl._Substrate_binding_domain_of_ABC-type_glycine_betaine_transport_system,_and_NMT1/THI5_like

description:
  Mixed, incl. Substrate binding domain of ABC-type glycine betaine transport system, and NMT1/THI5 like


id: CL:6185
description: NMT1/THI5 like, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6185_NMT1/THI5_like,_and_Sulfur_metabolism


id: CL:6196
description: Mixed, incl. Aliphatic sulfonates-binding protein, and NMT1/THI5 like
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6196_Mixed,_incl._Aliphatic_sulfonates-binding_protein,_and_NMT1/THI5_like


id: CL:6211
description: NlpA lipoprotein, and Sulfur metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6211_NlpA_lipoprotein,_and_Sulfur_metabolism


id: CL:6223
description: Mixed, incl. Dihydroorotase activity, and Dihydroorotate dehydrogenase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6223_Mixed,_incl._Dihydroorotase_activity,_and_Dihydroorotate_dehydrogenase_domain


id: CL:6240
description: Mixed, incl. Ferritin-like, and Ferric-uptake regulator
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6240_Mixed,_incl._Ferritin-like,_and_Ferric-uptake_regulator


id: CL:6241
description: Mixed, incl. Ferritin-like diiron domain, and Rubredoxin-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6241_Mixed,_incl._Ferritin-like_diiron_domain,_and_Rubredoxin-like_domain


id: CL:6243
description: Ferritin-like diiron domain, and Flavodoxin
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6243_Ferritin-like_diiron_domain,_and_Flavodoxin


id: CL:6263
description: Mixed, incl. Ferric-uptake regulator, and Cell adhesion
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6263_Mixed,_incl._Ferric-uptake_regulator,_and_Cell_adhesion


id: CL:627
description: Catalytic activity, acting on DNA, and Mismatch repair
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:627_Catalytic_activity,_acting_on_DNA,_and_Mismatch_repair


id: CL:6279
description: Mixed, incl. YheO-like, and RidA family
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6279_Mixed,_incl._YheO-like,_and_RidA_family


id: CL:6281
description: Mixed, incl. RidA family, and Transcription cis-regulatory region binding
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6281_Mixed,_incl._RidA_family,_and_Transcription_cis-regulatory_region_binding


id: CL:629
description: Catalytic activity, acting on DNA, and Nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:629_Catalytic_activity,_acting_on_DNA,_and_Nucleoid


id: CL:630
description: Catalytic activity, acting on DNA, and Nucleoid
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:630_Catalytic_activity,_acting_on_DNA,_and_Nucleoid


id: CL:6300
description: Mixed, incl. Catalytic activity, acting on DNA, and Negative regulation of RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6300_Mixed,_incl._Catalytic_activity,_acting_on_DNA,_and_Negative_regulation_of_RNA_metabolic_process


id: CL:6301
description: Mostly uncharacterized, incl. Transposase IS200 like, and ArsC family
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6301_Mostly_uncharacterized,_incl._Transposase_IS200_like,_and_ArsC_family


id: CL:6302
description: Mixed, incl. Transposase IS200 like, and ArsC family
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6302_Mixed,_incl._Transposase_IS200_like,_and_ArsC_family


id: CL:6303
description: Mixed, incl. Transposase IS200 like, and NTP pyrophosphohydrolase MazG, putative catalytic core
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6303_Mixed,_incl._Transposase_IS200_like,_and_NTP_pyrophosphohydrolase_MazG,_putative_catalytic_core


id: CL:6306
description: Mixed, incl. NTP pyrophosphohydrolase MazG, putative catalytic core, and MafB19-like deaminase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6306_Mixed,_incl._NTP_pyrophosphohydrolase_MazG,_putative_catalytic_core,_and_MafB19-like_deaminase


id: CL:631
description: Mixed, incl. SOS response, and Exonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:631_Mixed,_incl._SOS_response,_and_Exonuclease


id: CL:632
description: Mixed, incl. SOS response, and DNA topoisomerase, type IA
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:632_Mixed,_incl._SOS_response,_and_DNA_topoisomerase,_type_IA


id: CL:6327
description: Mixed, incl. ArsC family, and Capsule polysaccharide biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6327_Mixed,_incl._ArsC_family,_and_Capsule_polysaccharide_biosynthesis


id: CL:6345
description: Mixed, incl. Steroid degradation, and CGCAxxGCC motif
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6345_Mixed,_incl._Steroid_degradation,_and_CGCAxxGCC_motif


id: CL:6346
description: Mixed, incl. Steroid degradation, and HxlR-like helix-turn-helix
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6346_Mixed,_incl._Steroid_degradation,_and_HxlR-like_helix-turn-helix


id: CL:635
description: DNA topoisomerase, type IA, and Exonuclease
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:635_DNA_topoisomerase,_type_IA,_and_Exonuclease


id: CL:6357
description: Mixed, incl. CGCAxxGCC motif, and Lipoic acid metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6357_Mixed,_incl._CGCAxxGCC_motif,_and_Lipoic_acid_metabolism


id: CL:6366
description: Mostly uncharacterized, incl. Vitamin B6 metabolism, and DNA N-glycosylase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6366_Mostly_uncharacterized,_incl._Vitamin_B6_metabolism,_and_DNA_N-glycosylase_activity


id: CL:6367
description: Mixed, incl. Vitamin B6 metabolism, and DeoR C terminal sensor domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6367_Mixed,_incl._Vitamin_B6_metabolism,_and_DeoR_C_terminal_sensor_domain


id: CL:637
description: Mixed, incl. DNA topoisomerase III, and DNA recombination/repair protein RecN
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:637_Mixed,_incl._DNA_topoisomerase_III,_and_DNA_recombination/repair_protein_RecN


id: CL:6370
description: Mixed, incl. Acetyltransferase (GNAT) family, and Cell surface
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6370_Mixed,_incl._Acetyltransferase_(GNAT)_family,_and_Cell_surface


id: CL:6384
description: Mixed, incl. Pyridoxamine-phosphate oxidase activity, and DeoR C terminal sensor domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6384_Mixed,_incl._Pyridoxamine-phosphate_oxidase_activity,_and_DeoR_C_terminal_sensor_domain


id: CL:6395
description: Mixed, incl. DNA N-glycosylase activity, and Polysaccharide biosynthesis C-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6395_Mixed,_incl._DNA_N-glycosylase_activity,_and_Polysaccharide_biosynthesis_C-terminal_domain


id: CL:6414
description: Mixed, incl. CAAX-box protein processing, and Cell wall macromolecule catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6414_Mixed,_incl._CAAX-box_protein_processing,_and_Cell_wall_macromolecule_catabolic_process


id: CL:6415
description: CAAX-box protein processing, and Cell wall macromolecule catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6415_CAAX-box_protein_processing,_and_Cell_wall_macromolecule_catabolic_process


id: CL:6426
description: Mixed, incl. Esterase, Ig-like N-terminal, and Conserved hypothetical protein 95
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6426_Mixed,_incl._Esterase,_Ig-like_N-terminal,_and_Conserved_hypothetical_protein_95


id: CL:6440
description: Mixed, incl. UspA, and Lipopolysaccharide assembly protein A domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6440_Mixed,_incl._UspA,_and_Lipopolysaccharide_assembly_protein_A_domain


id: CL:6441
description: Mixed, incl. UspA, and Vitamin catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6441_Mixed,_incl._UspA,_and_Vitamin_catabolic_process


id: CL:6443
description: Mixed, incl. UspA, and Transglycosylase associated protein
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6443_Mixed,_incl._UspA,_and_Transglycosylase_associated_protein


id: CL:6457
description: Mixed, incl. Protein of unknown function DUF3231, and Clp protease
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6457_Mixed,_incl._Protein_of_unknown_function_DUF3231,_and_Clp_protease


id: CL:6479
description: Mixed, incl. EamA-like transporter family, and Aminotransferase, class I/classII
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6479_Mixed,_incl._EamA-like_transporter_family,_and_Aminotransferase,_class_I/classII


id: CL:6480
description: Mixed, incl. EamA-like transporter family, and Aminotransferase, class I/classII
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6480_Mixed,_incl._EamA-like_transporter_family,_and_Aminotransferase,_class_I/classII


id: CL:6482
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6482_Mixed,_incl._EamA-like_transporter_family,_and_Helix_turn_helix_gluconate_operon_transcriptional_repressor

description:
  Mixed, incl. EamA-like transporter family, and Helix_turn_helix gluconate operon transcriptional repressor


id: CL:6483
description: EamA-like transporter family, and LysE type translocator
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6483_EamA-like_transporter_family,_and_LysE_type_translocator


id: CL:6485
description: EamA-like transporter family, and AraC-like ligand binding domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6485_EamA-like_transporter_family,_and_AraC-like_ligand_binding_domain


id: CL:6519
description: EamA-like transporter family, and Aminotransferase, class I/classII
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6519_EamA-like_transporter_family,_and_Aminotransferase,_class_I/classII


id: CL:6547
description: PrkA AAA domain, and SpoVR like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6547_PrkA_AAA_domain,_and_SpoVR_like_protein


id: CL:6564
description: Mixed, incl. LysR, substrate-binding, and Cyclophilin-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6564_Mixed,_incl._LysR,_substrate-binding,_and_Cyclophilin-like_domain_superfamily


id: CL:6566
description: LysR, substrate-binding, and MCRA family
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6566_LysR,_substrate-binding,_and_MCRA_family


id: CL:6614
description: Mostly uncharacterized, incl. MCRA family, and Tautomerase enzyme
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6614_Mostly_uncharacterized,_incl._MCRA_family,_and_Tautomerase_enzyme


id: CL:6615
description: Mixed, incl. MCRA family, and Pyruvate phosphate dikinase, AMP/ATP-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6615_Mixed,_incl._MCRA_family,_and_Pyruvate_phosphate_dikinase,_AMP/ATP-binding


id: CL:6626
description: Mixed, incl. Tautomerase enzyme, and LysR, substrate-binding
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6626_Mixed,_incl._Tautomerase_enzyme,_and_LysR,_substrate-binding


id: CL:6639
description: Cyclophilin-like domain superfamily, and LamB/YcsF family
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6639_Cyclophilin-like_domain_superfamily,_and_LamB/YcsF_family


id: CL:6642
description: Cyclophilin-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6642_Cyclophilin-like_domain_superfamily


id: CL:6666
description: Mostly uncharacterized, incl. Cell death, and RNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6666_Mostly_uncharacterized,_incl._Cell_death,_and_RNA_ligase_activity


id: CL:6667
description: Mostly uncharacterized, incl. RNA ligase activity, and RNA repair pathway DNA polymerase beta
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6667_Mostly_uncharacterized,_incl._RNA_ligase_activity,_and_RNA_repair_pathway_DNA_polymerase_beta


id: CL:6668
description: Mixed, incl. RNA ligase activity, and RNA repair pathway DNA polymerase beta
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6668_Mixed,_incl._RNA_ligase_activity,_and_RNA_repair_pathway_DNA_polymerase_beta


id: CL:6669
description: Mostly uncharacterized, incl. MPN domain, and Putative metallopeptidase domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6669_Mostly_uncharacterized,_incl._MPN_domain,_and_Putative_metallopeptidase_domain


id: CL:6670
description: Mixed, incl. MPN domain, and PD-(D/E)XK endonuclease-like domain superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6670_Mixed,_incl._MPN_domain,_and_PD-(D/E)XK_endonuclease-like_domain_superfamily


id: CL:6686
description: Mixed, incl. Putative metallopeptidase domain, and Calcineurin-like phosphoesterase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6686_Mixed,_incl._Putative_metallopeptidase_domain,_and_Calcineurin-like_phosphoesterase


id: CL:6700
description: Mixed, incl. RNA repair pathway DNA polymerase beta, and RNA ligase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6700_Mixed,_incl._RNA_repair_pathway_DNA_polymerase_beta,_and_RNA_ligase_activity


id: CL:671
description: DNA biosynthetic process, and Helix-hairpin-helix motif
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:671_DNA_biosynthetic_process,_and_Helix-hairpin-helix_motif


id: CL:6713
description: Mixed, incl. Armadillo-type fold, and Phosphotyrosine protein phosphatase I
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6713_Mixed,_incl._Armadillo-type_fold,_and_Phosphotyrosine_protein_phosphatase_I


id: CL:6722
description: Mixed, incl. Cell death, and RDD family
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6722_Mixed,_incl._Cell_death,_and_RDD_family


id: CL:6723
description: Mixed, incl. Cell death, and RDD family
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6723_Mixed,_incl._Cell_death,_and_RDD_family


id: CL:6728
description: Mixed, incl. RDD family, and ChlI/MoxR, AAA lid domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6728_Mixed,_incl._RDD_family,_and_ChlI/MoxR,_AAA_lid_domain


id: CL:6750
description: Mixed, incl. Serine aminopeptidase, S33
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6750_Mixed,_incl._Serine_aminopeptidase,_S33


id: CL:6764
description: Mixed, incl. Bile acid:sodium symporter, and GNAT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6764_Mixed,_incl._Bile_acid:sodium_symporter,_and_GNAT_domain


id: CL:6765
description: Mixed, incl. GNAT domain, and Photosynthesis, light reaction
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6765_Mixed,_incl._GNAT_domain,_and_Photosynthesis,_light_reaction


id: CL:6767
description: Mixed, incl. Tryptophan metabolism, and TonB dependent receptor
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6767_Mixed,_incl._Tryptophan_metabolism,_and_TonB_dependent_receptor


id: CL:6781
description: Mixed, incl. Photosynthesis, light reaction, and Nickel
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6781_Mixed,_incl._Photosynthesis,_light_reaction,_and_Nickel


id: CL:6792
description: Mixed, incl. Bile acid:sodium symporter, and Gdt1 family
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6792_Mixed,_incl._Bile_acid:sodium_symporter,_and_Gdt1_family


id: CL:6803
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6803_Mixed,_incl._Ferrous_iron_transmembrane_transporter_activity,_and_Ferrous_iron_transporter_FeoA_domain

description:
  Mixed, incl. Ferrous iron transmembrane transporter activity, and Ferrous iron transporter FeoA domain


id: CL:6806
description: Ferrous iron transmembrane transporter activity, and Ferrous iron transporter FeoA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6806_Ferrous_iron_transmembrane_transporter_activity,_and_Ferrous_iron_transporter_FeoA_domain


id: CL:682
description: DNA replication, and DNA excision
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:682_DNA_replication,_and_DNA_excision


id: CL:6822
description: Mixed, incl. N-acetylmuramoyl-L-alanine amidase domain, and Dinitrogenase iron-molybdenum cofactor
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6822_Mixed,_incl._N-acetylmuramoyl-L-alanine_amidase_domain,_and_Dinitrogenase_iron-molybdenum_cofactor


id: CL:6833
description: Mostly uncharacterized, incl. MCRA family, and Homoserine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6833_Mostly_uncharacterized,_incl._MCRA_family,_and_Homoserine_kinase_activity


id: CL:6835
description: Mixed, incl. MatE, and Cupin 2, conserved barrel
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6835_Mixed,_incl._MatE,_and_Cupin_2,_conserved_barrel


id: CL:684
description: DNA replication, and DNA excision
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:684_DNA_replication,_and_DNA_excision


id: CL:6847
description: Mixed, incl. MCRA family, and Homoserine kinase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6847_Mixed,_incl._MCRA_family,_and_Homoserine_kinase_activity


id: CL:685
description: Mismatch repair, and DNA excision
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:685_Mismatch_repair,_and_DNA_excision


id: CL:6859
description: Mixed, incl. 50S ribosomal protein L30e-like, and ACT domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6859_Mixed,_incl._50S_ribosomal_protein_L30e-like,_and_ACT_domain


id: CL:687
description: DNA polymerase complex, and Exonuclease, RNase T/DNA polymerase III
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:687_DNA_polymerase_complex,_and_Exonuclease,_RNase_T/DNA_polymerase_III


id: CL:6873
description: Mixed, incl. CorA, cytoplasmic domain, and Putative inner membrane exporter, YdcZ
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6873_Mixed,_incl._CorA,_cytoplasmic_domain,_and_Putative_inner_membrane_exporter,_YdcZ


id: CL:6882
description: Mixed, incl. DNA metabolic process, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6882_Mixed,_incl._DNA_metabolic_process,_and_Coiled_coil


id: CL:6883
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6883_Mixed,_incl._Biological_process_involved_in_interspecies_interaction_between_organisms,_and_DNA_binding

description:
  Mixed, incl. Biological process involved in interspecies interaction between organisms, and DNA binding


id: CL:6884
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6884_Mixed,_incl._Biological_process_involved_in_interspecies_interaction_between_organisms,_and_DNA_binding

description:
  Mixed, incl. Biological process involved in interspecies interaction between organisms, and DNA binding


id: CL:6885
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6885_Mostly_uncharacterized,_incl._Biological_process_involved_in_interspecies_interaction_between_organisms,_and_Nucleotide_excision_repair

description:
  Mostly uncharacterized, incl. Biological process involved in interspecies interaction between organisms, and Nucleotide excision repair


id: CL:6886
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6886_Mostly_uncharacterized,_incl._Biological_process_involved_in_interspecies_interaction_between_organisms,_and_Amidase_activity

description:
  Mostly uncharacterized, incl. Biological process involved in interspecies interaction between organisms, and Amidase activity


id: CL:6887
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6887_Mixed,_incl._Biological_process_involved_in_interspecies_interaction_between_organisms,_and_DNA_strand_exchange_activity

description:
  Mixed, incl. Biological process involved in interspecies interaction between organisms, and DNA strand exchange activity


id: CL:6889
description: Mixed, incl. DNA restriction-modification system, and DNA strand exchange activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6889_Mixed,_incl._DNA_restriction-modification_system,_and_DNA_strand_exchange_activity


id: CL:6891
description: Mixed, incl. DHHA1 domain, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6891_Mixed,_incl._DHHA1_domain,_and_Coiled_coil


id: CL:6893
description: Mixed, incl. DHHA1 domain, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6893_Mixed,_incl._DHHA1_domain,_and_Coiled_coil


id: CL:6935
description: Mixed, incl. Host cell cytoplasm, and Chaperone of endosialidase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6935_Mixed,_incl._Host_cell_cytoplasm,_and_Chaperone_of_endosialidase


id: CL:6948
description: Mixed, incl. Viral process, and Amidase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6948_Mixed,_incl._Viral_process,_and_Amidase_activity


id: CL:6949
description: Mostly uncharacterized, incl. Amidase activity, and Other glycan degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6949_Mostly_uncharacterized,_incl._Amidase_activity,_and_Other_glycan_degradation


id: CL:6952
description: Mostly uncharacterized, incl. Amidase activity, and Other glycan degradation
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6952_Mostly_uncharacterized,_incl._Amidase_activity,_and_Other_glycan_degradation


id: CL:6954
description: Mixed, incl. Amidase activity, and Pyrimidine metabolism
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6954_Mixed,_incl._Amidase_activity,_and_Pyrimidine_metabolism


id: CL:6982
description: Mixed, incl. Viral process, and NlpC/P60 family
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6982_Mixed,_incl._Viral_process,_and_NlpC/P60_family


id: CL:6986
description: Adhesion of symbiont to host, and NlpC/P60 family
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:6986_Adhesion_of_symbiont_to_host,_and_NlpC/P60_family


id: CL:699
description: DNA excision, and UvrD/REP helicase N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:699_DNA_excision,_and_UvrD/REP_helicase_N-terminal_domain


id: CL:7007
description: Mostly uncharacterized, incl. Nucleotide excision repair, and BRO N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:7007_Mostly_uncharacterized,_incl._Nucleotide_excision_repair,_and_BRO_N-terminal_domain


id: CL:7008
description: Mostly uncharacterized, incl. BRO N-terminal domain, and DNA primase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:7008_Mostly_uncharacterized,_incl._BRO_N-terminal_domain,_and_DNA_primase_activity


id: CL:7010
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:7010_Mostly_uncharacterized,_incl._SpoVT_/_AbrB_like_domain,_and_tRNA_endonuclease-like_domain_superfamily

description:
  Mostly uncharacterized, incl. SpoVT / AbrB like domain, and tRNA endonuclease-like domain superfamily


id: CL:7013
description: Mixed, incl. SpoVT / AbrB like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:7013_Mixed,_incl._SpoVT_/_AbrB_like_domain


id: CL:7042
description: Mixed, incl. BRO N-terminal domain, and DNA primase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:7042_Mixed,_incl._BRO_N-terminal_domain,_and_DNA_primase_activity


id: CL:7057
description: Mixed, incl. BRO N-terminal domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:7057_Mixed,_incl._BRO_N-terminal_domain


id: CL:7067
description: Helicase/UvrB, N-terminal, and HIT-like superfamily
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:7067_Helicase/UvrB,_N-terminal,_and_HIT-like_superfamily


id: CL:7076
description: Mixed, incl. Helix-turn-helix XRE-family like proteins, and Pfam phage integrase family
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:7076_Mixed,_incl._Helix-turn-helix_XRE-family_like_proteins,_and_Pfam_phage_integrase_family


id: CL:7077
description: Mixed, incl. Pfam phage integrase family, and Helix-turn-helix XRE-family like proteins
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:7077_Mixed,_incl._Pfam_phage_integrase_family,_and_Helix-turn-helix_XRE-family_like_proteins


id: CL:7079
description: Mixed, incl. Helix-turn-helix domain, and Core-binding (CB) domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:7079_Mixed,_incl._Helix-turn-helix_domain,_and_Core-binding_(CB)_domain


id: CL:7096
description: Mixed, incl. N-acetylmuramoyl-L-alanine amidase, and Primosome complex
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:7096_Mixed,_incl._N-acetylmuramoyl-L-alanine_amidase,_and_Primosome_complex


id: CL:710
description: Primosome, and Single-stranded DNA-binding protein
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:710_Primosome,_and_Single-stranded_DNA-binding_protein


id: CL:7107
description: Mostly uncharacterized, incl. Tip attachment protein J, and N-acetylmuramoyl-L-alanine amidase
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:7107_Mostly_uncharacterized,_incl._Tip_attachment_protein_J,_and_N-acetylmuramoyl-L-alanine_amidase


id: CL:7109
description: Mostly uncharacterized, incl. Tip attachment protein J
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:7109_Mostly_uncharacterized,_incl._Tip_attachment_protein_J


id: CL:7127
description: N-acetylmuramoyl-L-alanine amidase, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:7127_N-acetylmuramoyl-L-alanine_amidase,_and_Coiled_coil


id: CL:7144
description: Mixed, incl. DNA integration, and Transposition, DNA-mediated
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:7144_Mixed,_incl._DNA_integration,_and_Transposition,_DNA-mediated


id: CL:7145
description: Mixed, incl. DNA integration, and Transposition
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:7145_Mixed,_incl._DNA_integration,_and_Transposition


id: CL:7147
description: Mixed, incl. Integrase, catalytic core, and Transposition
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:7147_Mixed,_incl._Integrase,_catalytic_core,_and_Transposition


id: CL:7148
description: Mixed, incl. Transposition, and HTH-like domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:7148_Mixed,_incl._Transposition,_and_HTH-like_domain


id: CL:7161
description: DDE transposase retroviral integrase sub-family, and PhoH-like protein
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:7161_DDE_transposase_retroviral_integrase_sub-family,_and_PhoH-like_protein


id: CL:7171
description: Mixed, incl. Pfam phage integrase family, and Transposition, DNA-mediated
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:7171_Mixed,_incl._Pfam_phage_integrase_family,_and_Transposition,_DNA-mediated


id: CL:7185
description: Mostly uncharacterized, incl. Peptidase M48
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:7185_Mostly_uncharacterized,_incl._Peptidase_M48


id: CL:7203
description: Mostly uncharacterized, incl. Response to tellurium ion, and Response to pH
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:7203_Mostly_uncharacterized,_incl._Response_to_tellurium_ion,_and_Response_to_pH


id: CL:7205
description: Mixed, incl. DNA recombination, and Coiled coil
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:7205_Mixed,_incl._DNA_recombination,_and_Coiled_coil


id: CL:7222
description: Mixed, incl. Response to tellurium ion, and Response to pH
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:7222_Mixed,_incl._Response_to_tellurium_ion,_and_Response_to_pH


id: CL:7236
description: Mostly uncharacterized, incl. Ferritin-like, and Protein of unknown function DUF445
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:7236_Mostly_uncharacterized,_incl._Ferritin-like,_and_Protein_of_unknown_function_DUF445


id: CL:7238
description: Mixed, incl. Protein of unknown function DUF445, and Ferritin-like
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:7238_Mixed,_incl._Protein_of_unknown_function_DUF445,_and_Ferritin-like


id: CL:7240
description: Mixed, incl. Putative metallopeptidase domain, and ATPase, dynein-related, AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:7240_Mixed,_incl._Putative_metallopeptidase_domain,_and_ATPase,_dynein-related,_AAA_domain


id: CL:7261
description: Mixed, incl. Protein of unknown function DUF445
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:7261_Mixed,_incl._Protein_of_unknown_function_DUF445


id: CL:7282
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:7282_ABC_transporter_substrate_binding_protein,_and_Branched-chain_amino_acid_transport_system_/_permease_component

description:
  ABC transporter substrate binding protein, and Branched-chain amino acid transport system / permease component


id: CL:729
description: Mixed, incl. Trp repressor/replication initiator, and RecF/RecN/SMC, N-terminal
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:729_Mixed,_incl._Trp_repressor/replication_initiator,_and_RecF/RecN/SMC,_N-terminal


id: CL:7291
description: Mixed, incl. Skp domain superfamily, and ATP-binding cassette (ABC) transporter complex
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:7291_Mixed,_incl._Skp_domain_superfamily,_and_ATP-binding_cassette_(ABC)_transporter_complex


id: CL:7367
description: DNA replication, synthesis of RNA primer
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:7367_DNA_replication,_synthesis_of_RNA_primer


id: CL:747
description: Mixed, incl. PD-(D/E)XK nuclease superfamily, and Ribonuclease III domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:747_Mixed,_incl._PD-(D/E)XK_nuclease_superfamily,_and_Ribonuclease_III_domain


id: CL:762
description: Mixed, incl. Ribonucleoside monophosphate biosynthetic process, and One-carbon metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:762_Mixed,_incl._Ribonucleoside_monophosphate_biosynthetic_process,_and_One-carbon_metabolic_process


id: CL:763
description: Mixed, incl. Ribonucleoside monophosphate biosynthetic process, and One-carbon metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:763_Mixed,_incl._Ribonucleoside_monophosphate_biosynthetic_process,_and_One-carbon_metabolic_process


id: CL:764
description: Ribonucleoside monophosphate biosynthetic process, and One-carbon metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:764_Ribonucleoside_monophosphate_biosynthetic_process,_and_One-carbon_metabolic_process


id: CL:765
description: Ribonucleoside monophosphate biosynthetic process, and One-carbon metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:765_Ribonucleoside_monophosphate_biosynthetic_process,_and_One-carbon_metabolic_process


id: CL:766
description: Purine biosynthesis, and One-carbon metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:766_Purine_biosynthesis,_and_One-carbon_metabolic_process


id: CL:823
description: Threonine/Serine exporter, ThrE, and Peptidase, FtsH
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:823_Threonine/Serine_exporter,_ThrE,_and_Peptidase,_FtsH


id: CL:835
description: Mixed, incl. Nucleoside metabolic process, and 5-methylthioadenosine deaminase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:835_Mixed,_incl._Nucleoside_metabolic_process,_and_5-methylthioadenosine_deaminase_activity


id: CL:837
description: Nucleoside catabolic process, and Deoxyribonucleotide catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:837_Nucleoside_catabolic_process,_and_Deoxyribonucleotide_catabolic_process


id: CL:853
description: Purine salvage, and Pentose catabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:853_Purine_salvage,_and_Pentose_catabolic_process


id: CL:866
description: Mixed, incl. Base excision repair, and Telomere recombination
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:866_Mixed,_incl._Base_excision_repair,_and_Telomere_recombination


id: CL:868
description: Mixed, incl. Telomere recombination, and Peptide chain release factor
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:868_Mixed,_incl._Telomere_recombination,_and_Peptide_chain_release_factor


id: CL:891
description: Mixed, incl. ParB-like nuclease domain, and Chromosome partition
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:891_Mixed,_incl._ParB-like_nuclease_domain,_and_Chromosome_partition


id: CL:892
description: Mixed, incl. ParB-like nuclease domain, and Chromosome partition
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:892_Mixed,_incl._ParB-like_nuclease_domain,_and_Chromosome_partition


id: CL:894
description: Mixed, incl. Protein carrier chaperone, and RNA (guanine-N7)-methylation
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:894_Mixed,_incl._Protein_carrier_chaperone,_and_RNA_(guanine-N7)-methylation


id: CL:907
description: ParB-like nuclease domain, and AAA domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:907_ParB-like_nuclease_domain,_and_AAA_domain


id: CL:917
description: Mixed, incl. Peptidase M23, and Chromosome segregation
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:917_Mixed,_incl._Peptidase_M23,_and_Chromosome_segregation


id: CL:927
description: Mixed, incl. SRP54-type protein, helical bundle domain, and K homology domain-like, alpha/beta
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:927_Mixed,_incl._SRP54-type_protein,_helical_bundle_domain,_and_K_homology_domain-like,_alpha/beta


id: CL:929
description: SRP54-type protein, helical bundle domain, and tRNA (guanine-N1-)-methyltransferase activity
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:929_SRP54-type_protein,_helical_bundle_domain,_and_tRNA_(guanine-N1-)-methyltransferase_activity


id: CL:953
description: Mixed, incl. UVR domain, and PIN domain
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:953_Mixed,_incl._UVR_domain,_and_PIN_domain


id: CL:966
description: Mixed, incl. Cell cycle, and Peptidoglycan biosynthesis
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:966_Mixed,_incl._Cell_cycle,_and_Peptidoglycan_biosynthesis


id: CL:968
description: Mixed, incl. Cell cycle, and Penicillin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:968_Mixed,_incl._Cell_cycle,_and_Penicillin_binding


id: CL:970
description: Cell cycle, and Penicillin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:970_Cell_cycle,_and_Penicillin_binding


id: CL:971
description: Cell cycle, and Penicillin binding
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:971_Cell_cycle,_and_Penicillin_binding


id: CL:972
description: Peptidoglycan biosynthesis, and Septum formation initiator
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:972_Peptidoglycan_biosynthesis,_and_Septum_formation_initiator


id: CL:980
description: Mur ligase, central, and Glycosyl transferase family 4
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:980_Mur_ligase,_central,_and_Glycosyl_transferase_family_4


id: CL:99
description: Translation, and RNA metabolic process
name:
  Local Network Cluster (STRING).STRING_v12.0_146817_STRINGid_CL:99_Translation,_and_RNA_metabolic_process


id: GO:0000462
description: Maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
memo: https://amigo.geneontology.org/amigo/term/GO:0000462
golevel: 11
name:
  GOBP.STRING_v12.0_146817_STRINGid_GO:0000462_Maturation_of_SSU-rRNA_from_tricistronic_rRNA_transcript_(SSU-rRNA,_5.8S_rRNA,_LSU-rRNA)


id: GO:0000701
description: Purine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0000701
golevel: 7
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0000701_Purine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0000724
description: Double-strand break repair via homologous recombination
memo: https://amigo.geneontology.org/amigo/term/GO:0000724
golevel: 9
name:
  GOBP.STRING_v12.0_146817_STRINGid_GO:0000724_Double-strand_break_repair_via_homologous_recombination


id: GO:0001073
description: Transcription antitermination factor activity, DNA binding
memo: https://amigo.geneontology.org/amigo/term/GO:0001073
golevel: 2
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0001073_Transcription_antitermination_factor_activity,_DNA_binding


id: GO:0002926
description: tRNA wobble base 5-methoxycarbonylmethyl-2-thiouridinylation
memo: https://amigo.geneontology.org/amigo/term/GO:0002926
golevel: 13
name:
  GOBP.STRING_v12.0_146817_STRINGid_GO:0002926_tRNA_wobble_base_5-methoxycarbonylmethyl-2-thiouridinylation


id: GO:0003848
description: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003848
golevel: 5
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0003848_2-amino-4-hydroxy-6-hydroxymethyldihydropteridine_diphosphokinase_activity


id: GO:0003864
description: 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003864
golevel: 5
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0003864_3-methyl-2-oxobutanoate_hydroxymethyltransferase_activity


id: GO:0003871
description: 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003871
golevel: 6
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0003871_5-methyltetrahydropteroyltriglutamate-homocysteine_S-methyltransferase_activity


id: GO:0003880
description: Protein C-terminal carboxyl O-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003880
golevel: 8
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0003880_Protein_C-terminal_carboxyl_O-methyltransferase_activity


id: GO:0003882
description: CDP-diacylglycerol-serine O-phosphatidyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003882
golevel: 6
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0003882_CDP-diacylglycerol-serine_O-phosphatidyltransferase_activity


id: GO:0003906
description: DNA-(apurinic or apyrimidinic site) endonuclease activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003906
golevel: 4
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0003906_DNA-(apurinic_or_apyrimidinic_site)_endonuclease_activity


id: GO:0003908
description: methylated-DNA-[protein]-cysteine S-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003908
golevel: 6
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0003908_methylated-DNA-[protein]-cysteine_S-methyltransferase_activity


id: GO:0003917
description: DNA topoisomerase type I (single strand cut, ATP-independent) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003917
golevel: 5
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0003917_DNA_topoisomerase_type_I_(single_strand_cut,_ATP-independent)_activity


id: GO:0003918
description: DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0003918
golevel: 5
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0003918_DNA_topoisomerase_type_II_(double_strand_cut,_ATP-hydrolyzing)_activity


id: GO:0003949
memo: https://amigo.geneontology.org/amigo/term/GO:0003949
golevel: 5
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0003949_1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide_isomerase_activity

description:
  1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity


id: GO:0004015
description: adenosylmethionine-8-amino-7-oxononanoate transaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004015
golevel: 5
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0004015_adenosylmethionine-8-amino-7-oxononanoate_transaminase_activity


id: GO:0004018
description: N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004018
golevel: 5
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0004018_N6-(1,2-dicarboxyethyl)AMP_AMP-lyase_(fumarate-forming)_activity


id: GO:0004081
description: bis(5-nucleosyl)-tetraphosphatase (asymmetrical) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004081
golevel: 7
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0004081_bis(5-nucleosyl)-tetraphosphatase_(asymmetrical)_activity


id: GO:0004088
description: Carbamoyl-phosphate synthase (glutamine-hydrolyzing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004088
golevel: 5
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0004088_Carbamoyl-phosphate_synthase_(glutamine-hydrolyzing)_activity


id: GO:0004317
description: 3-hydroxypalmitoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004317
golevel: 6
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0004317_3-hydroxypalmitoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0004360
description: glutamine-fructose-6-phosphate transaminase (isomerizing) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004360
golevel: 6
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0004360_glutamine-fructose-6-phosphate_transaminase_(isomerizing)_activity


id: GO:0004486
description: Methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004486
golevel: 5
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0004486_Methylenetetrahydrofolate_dehydrogenase_[NAD(P)+]_activity


id: GO:0004488
description: Methylenetetrahydrofolate dehydrogenase (NADP+) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004488
golevel: 6
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0004488_Methylenetetrahydrofolate_dehydrogenase_(NADP+)_activity


id: GO:0004514
description: Nicotinate-nucleotide diphosphorylase (carboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004514
golevel: 5
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0004514_Nicotinate-nucleotide_diphosphorylase_(carboxylating)_activity


id: GO:0004616
description: Phosphogluconate dehydrogenase (decarboxylating) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004616
golevel: 5
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0004616_Phosphogluconate_dehydrogenase_(decarboxylating)_activity


id: GO:0004639
description: Phosphoribosylaminoimidazolesuccinocarboxamide synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004639
golevel: 5
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0004639_Phosphoribosylaminoimidazolesuccinocarboxamide_synthase_activity


id: GO:0004641
description: Phosphoribosylformylglycinamidine cyclo-ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004641
golevel: 5
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0004641_Phosphoribosylformylglycinamidine_cyclo-ligase_activity


id: GO:0004643
description: Phosphoribosylaminoimidazolecarboxamide formyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004643
golevel: 5
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0004643_Phosphoribosylaminoimidazolecarboxamide_formyltransferase_activity


id: GO:0004648
description: O-phospho-L-serine:2-oxoglutarate aminotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004648
golevel: 5
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0004648_O-phospho-L-serine:2-oxoglutarate_aminotransferase_activity


id: GO:0004671
description: Protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0004671
golevel: 9
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0004671_Protein_C-terminal_S-isoprenylcysteine_carboxyl_O-methyltransferase_activity


id: GO:0004748
description: Ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor
memo: https://amigo.geneontology.org/amigo/term/GO:0004748
golevel: 6
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0004748_Ribonucleoside-diphosphate_reductase_activity,_thioredoxin_disulfide_as_acceptor


id: GO:0005477
description: Pyruvate secondary active transmembrane transporter activity
memo: https://amigo.geneontology.org/amigo/term/GO:0005477
golevel: 7
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0005477_Pyruvate_secondary_active_transmembrane_transporter_activity


id: GO:0006303
description: Double-strand break repair via nonhomologous end joining
memo: https://amigo.geneontology.org/amigo/term/GO:0006303
golevel: 9
name:
  GOBP.STRING_v12.0_146817_STRINGid_GO:0006303_Double-strand_break_repair_via_nonhomologous_end_joining


id: GO:0006515
description: Protein quality control for misfolded or incompletely synthesized proteins
memo: https://amigo.geneontology.org/amigo/term/GO:0006515
golevel: 7
name:
  GOBP.STRING_v12.0_146817_STRINGid_GO:0006515_Protein_quality_control_for_misfolded_or_incompletely_synthesized_proteins


id: GO:0006614
description: SRP-dependent cotranslational protein targeting to membrane
memo: https://amigo.geneontology.org/amigo/term/GO:0006614
golevel: 11
name:
  GOBP.STRING_v12.0_146817_STRINGid_GO:0006614_SRP-dependent_cotranslational_protein_targeting_to_membrane


id: GO:0008263
description: Pyrimidine-specific mismatch base pair DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008263
golevel: 7
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0008263_Pyrimidine-specific_mismatch_base_pair_DNA_N-glycosylase_activity


id: GO:0008534
description: Oxidized purine nucleobase lesion DNA N-glycosylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008534
golevel: 7
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0008534_Oxidized_purine_nucleobase_lesion_DNA_N-glycosylase_activity


id: GO:0008659
description: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008659
golevel: 5
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0008659_(3R)-hydroxymyristoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008685
description: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008685
golevel: 4
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0008685_2-C-methyl-D-erythritol_2,4-cyclodiphosphate_synthase_activity


id: GO:0008690
description: 3-deoxy-manno-octulosonate cytidylyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008690
golevel: 6
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0008690_3-deoxy-manno-octulosonate_cytidylyltransferase_activity


id: GO:0008693
description: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008693
golevel: 6
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0008693_3-hydroxydecanoyl-[acyl-carrier-protein]_dehydratase_activity


id: GO:0008703
description: 5-amino-6-(5-phosphoribosylamino)uracil reductase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008703
golevel: 5
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0008703_5-amino-6-(5-phosphoribosylamino)uracil_reductase_activity


id: GO:0008757
description: S-adenosylmethionine-dependent methyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008757
golevel: 5
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0008757_S-adenosylmethionine-dependent_methyltransferase_activity


id: GO:0008759
description: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008759
golevel: 5
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0008759_UDP-3-O-[3-hydroxymyristoyl]_N-acetylglucosamine_deacetylase_activity


id: GO:0008760
description: UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008760
golevel: 4
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0008760_UDP-N-acetylglucosamine_1-carboxyvinyltransferase_activity


id: GO:0008764
description: UDP-N-acetylmuramoylalanine-D-glutamate ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008764
golevel: 5
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0008764_UDP-N-acetylmuramoylalanine-D-glutamate_ligase_activity


id: GO:0008766
description: UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine ligase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008766
golevel: 5
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0008766_UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate-D-alanyl-D-alanine_ligase_activity


id: GO:0008780
description: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008780
golevel: 6
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0008780_acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine_O-acyltransferase_activity


id: GO:0008817
description: cob(I)yrinic acid a,c-diamide adenosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008817
golevel: 4
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0008817_cob(I)yrinic_acid_a,c-diamide_adenosyltransferase_activity


id: GO:0008835
description: Diaminohydroxyphosphoribosylaminopyrimidine deaminase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008835
golevel: 5
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0008835_Diaminohydroxyphosphoribosylaminopyrimidine_deaminase_activity


id: GO:0008939
description: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008939
golevel: 5
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0008939_Nicotinate-nucleotide-dimethylbenzimidazole_phosphoribosyltransferase_activity


id: GO:0008961
description: Phosphatidylglycerol-prolipoprotein diacylglyceryl transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008961
golevel: 4
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0008961_Phosphatidylglycerol-prolipoprotein_diacylglyceryl_transferase_activity


id: GO:0008963
description: phospho-N-acetylmuramoyl-pentapeptide-transferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008963
golevel: 5
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0008963_phospho-N-acetylmuramoyl-pentapeptide-transferase_activity


id: GO:0008965
description: Phosphoenolpyruvate-protein phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008965
golevel: 5
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0008965_Phosphoenolpyruvate-protein_phosphotransferase_activity


id: GO:0008982
description: protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008982
golevel: 5
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0008982_protein-N(PI)-phosphohistidine-sugar_phosphotransferase_activity


id: GO:0008999
description: Ribosomal protein S5-alanine N-acetyltransferase activity
memo: https://amigo.geneontology.org/amigo/term/GO:0008999
golevel: 9
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0008999_Ribosomal_protein_S5-alanine_N-acetyltransferase_activity


id: GO:0009007
description: Site-specific DNA-methyltransferase (adenine-specific) activity
memo: https://amigo.geneontology.org/amigo/term/GO:0009007
golevel: 6
name:
  GOMF.STRING_v12.0_146817_STRINGid_GO:0009007_Site-specific_DNA-methyltransferase_(adenine-specific)_activity


id: GO:0009095
description: Aromatic amino acid family biosynthetic process, prephenate pathway
memo: https://amigo.geneontology.org/amigo/term/GO:0009095
golevel: 9
name:
  GOBP.STRING_v12.0_146817_STRINGid_GO:0009095_Aromatic_amino_acid_family_biosynthetic_process,_prephenate_pathway


id: GO:0009130
description: Pyrimidine nucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009130
golevel: 9
name:
  GOBP.STRING_v12.0_146817_STRINGid_GO:0009130_Pyrimidine_nucleoside_monophosphate_biosynthetic_process


id: GO:0009148
description: Pyrimidine nucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009148
golevel: 9
name:
  GOBP.STRING_v12.0_146817_STRINGid_GO:0009148_Pyrimidine_nucleoside_triphosphate_biosynthetic_process


id: GO:0009168
description: Purine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009168
golevel: 10
name:
  GOBP.STRING_v12.0_146817_STRINGid_GO:0009168_Purine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009173
description: Pyrimidine ribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009173
golevel: 9
name:
  GOBP.STRING_v12.0_146817_STRINGid_GO:0009173_Pyrimidine_ribonucleoside_monophosphate_metabolic_process


id: GO:0009174
description: Pyrimidine ribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009174
golevel: 10
name:
  GOBP.STRING_v12.0_146817_STRINGid_GO:0009174_Pyrimidine_ribonucleoside_monophosphate_biosynthetic_process


id: GO:0009175
description: Pyrimidine ribonucleoside monophosphate catabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009175
golevel: 10
name:
  GOBP.STRING_v12.0_146817_STRINGid_GO:0009175_Pyrimidine_ribonucleoside_monophosphate_catabolic_process


id: GO:0009176
description: Pyrimidine deoxyribonucleoside monophosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009176
golevel: 9
name:
  GOBP.STRING_v12.0_146817_STRINGid_GO:0009176_Pyrimidine_deoxyribonucleoside_monophosphate_metabolic_process


id: GO:0009177
description: Pyrimidine deoxyribonucleoside monophosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009177
golevel: 10
name:
  GOBP.STRING_v12.0_146817_STRINGid_GO:0009177_Pyrimidine_deoxyribonucleoside_monophosphate_biosynthetic_process


id: GO:0009196
description: Pyrimidine deoxyribonucleoside diphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009196
golevel: 9
name:
  GOBP.STRING_v12.0_146817_STRINGid_GO:0009196_Pyrimidine_deoxyribonucleoside_diphosphate_metabolic_process


id: GO:0009197
description: Pyrimidine deoxyribonucleoside diphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009197
golevel: 10
name:
  GOBP.STRING_v12.0_146817_STRINGid_GO:0009197_Pyrimidine_deoxyribonucleoside_diphosphate_biosynthetic_process


id: GO:0009206
description: Purine ribonucleoside triphosphate biosynthetic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009206
golevel: 10
name:
  GOBP.STRING_v12.0_146817_STRINGid_GO:0009206_Purine_ribonucleoside_triphosphate_biosynthetic_process


id: GO:0009208
description: Pyrimidine ribonucleoside triphosphate metabolic process
memo: https://amigo.geneontology.org/amigo/term/GO:0009208
golevel: 9
name:
  GOBP.STRING_v12.0_146817_STRINGid_GO:0009208_Pyrimidine_ribonucleoside_triphosphate_metabolic_process


