# pathwayInfo

id: PF03401
description: Tripartite tricarboxylate transporter family receptor
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03401
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03401_Tripartite_tricarboxylate_transporter_family_receptor


id: PF03446
description: NAD binding domain of 6-phosphogluconate dehydrogenase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03446
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03446_NAD_binding_domain_of_6-phosphogluconate_dehydrogenase


id: PF03447
description: Homoserine dehydrogenase, NAD binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03447
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03447_Homoserine_dehydrogenase,_NAD_binding_domain


id: PF03449
description: Transcription elongation factor, N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03449
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03449_Transcription_elongation_factor,_N-terminal


id: PF03453
description: MoeA N-terminal region (domain I and II)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03453
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03453_MoeA_N-terminal_region_(domain_I_and_II)


id: PF03460
description: Nitrite/Sulfite reductase ferredoxin-like half domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03460
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03460_Nitrite/Sulfite_reductase_ferredoxin-like_half_domain


id: PF03480
description: Bacterial extracellular solute-binding protein, family 7
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03480
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03480_Bacterial_extracellular_solute-binding_protein,_family_7


id: PF03551
description: Transcriptional regulator PadR-like family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03551
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03551_Transcriptional_regulator_PadR-like_family


id: PF03598
description: CO dehydrogenase/acetyl-CoA synthase complex beta subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03598
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03598_CO_dehydrogenase/acetyl-CoA_synthase_complex_beta_subunit


id: PF03599
description: CO dehydrogenase/acetyl-CoA synthase delta subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03599
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03599_CO_dehydrogenase/acetyl-CoA_synthase_delta_subunit


id: PF03649
description: Uncharacterised protein family (UPF0014)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03649
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03649_Uncharacterised_protein_family_(UPF0014)


id: PF03692
description: Putative zinc- or iron-chelating domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03692
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03692_Putative_zinc-_or_iron-chelating_domain


id: PF03698
description: Uncharacterised protein family (UPF0180)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03698
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03698_Uncharacterised_protein_family_(UPF0180)


id: PF03699
description: Uncharacterised protein family (UPF0182)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03699
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03699_Uncharacterised_protein_family_(UPF0182)


id: PF03711
description: Orn/Lys/Arg decarboxylase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03711
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03711_Orn/Lys/Arg_decarboxylase,_C-terminal_domain


id: PF03717
description: Penicillin-binding Protein dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03717
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03717_Penicillin-binding_Protein_dimerisation_domain


id: PF03719
description: Ribosomal protein S5, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03719
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03719_Ribosomal_protein_S5,_C-terminal_domain


id: PF03721
description: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03721
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03721_UDP-glucose/GDP-mannose_dehydrogenase_family,_NAD_binding_domain


id: PF03726
description: Polyribonucleotide nucleotidyltransferase, RNA binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03726
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03726_Polyribonucleotide_nucleotidyltransferase,_RNA_binding_domain


id: PF03748
description: Flagellar basal body-associated protein FliL
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03748
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03748_Flagellar_basal_body-associated_protein_FliL


id: PF03749
description: Sugar fermentation stimulation protein RE domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03749
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03749_Sugar_fermentation_stimulation_protein_RE_domain


id: PF03775
description: Septum formation inhibitor MinC, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03775
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03775_Septum_formation_inhibitor_MinC,_C-terminal_domain


id: PF03776
description: Septum formation topological specificity factor MinE
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03776
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03776_Septum_formation_topological_specificity_factor_MinE


id: PF03780
description: Asp23 family, cell envelope-related function
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03780
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03780_Asp23_family,_cell_envelope-related_function


id: PF03807
description: NADP oxidoreductase coenzyme F420-dependent
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03807
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03807_NADP_oxidoreductase_coenzyme_F420-dependent


id: PF03819
description: MazG nucleotide pyrophosphohydrolase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03819
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03819_MazG_nucleotide_pyrophosphohydrolase_domain


id: PF03862
description: SpoVAC/SpoVAEB sporulation membrane protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03862
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03862_SpoVAC/SpoVAEB_sporulation_membrane_protein


id: PF03900
description: Porphobilinogen deaminase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03900
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03900_Porphobilinogen_deaminase,_C-terminal_domain


id: PF03948
description: Ribosomal protein L9, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03948
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03948_Ribosomal_protein_L9,_C-terminal_domain


id: PF03950
description: tRNA synthetases class I (E and Q), anti-codon binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03950
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03950_tRNA_synthetases_class_I_(E_and_Q),_anti-codon_binding_domain


id: PF03951
description: Glutamine synthetase, beta-Grasp domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03951
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03951_Glutamine_synthetase,_beta-Grasp_domain


id: PF03961
description: Flagellar Assembly Protein A beta solenoid domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03961
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03961_Flagellar_Assembly_Protein_A_beta_solenoid_domain


id: PF03963
description: Flagellar hook capping protein - N-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03963
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03963_Flagellar_hook_capping_protein_-_N-terminal_region


id: PF03977
description: Na+-transporting oxaloacetate decarboxylase beta subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03977
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03977_Na+-transporting_oxaloacetate_decarboxylase_beta_subunit


id: PF03989
description: DNA gyrase C-terminal domain, beta-propeller
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF03989
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF03989_DNA_gyrase_C-terminal_domain,_beta-propeller


id: PF04020
description: Mycobacterial 4 TMS phage holin, superfamily IV
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04020
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF04020_Mycobacterial_4_TMS_phage_holin,_superfamily_IV


id: PF04041
description: beta-1,4-mannooligosaccharide phosphorylase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04041
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF04041_beta-1,4-mannooligosaccharide_phosphorylase


id: PF04069
description: Substrate binding domain of ABC-type glycine betaine transport system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04069
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF04069_Substrate_binding_domain_of_ABC-type_glycine_betaine_transport_system


id: PF04101
description: Glycosyltransferase family 28 C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04101
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF04101_Glycosyltransferase_family_28_C-terminal_domain


id: PF04127
description: DNA / pantothenate metabolism flavoprotein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04127
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF04127_DNA_/_pantothenate_metabolism_flavoprotein


id: PF04140
description: Isoprenylcysteine carboxyl methyltransferase (ICMT) family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04140
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF04140_Isoprenylcysteine_carboxyl_methyltransferase_(ICMT)_family_


id: PF04263
description: Thiamin pyrophosphokinase, catalytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04263
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF04263_Thiamin_pyrophosphokinase,_catalytic_domain


id: PF04268
description: Sarcosine oxidase, gamma subunit family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04268
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF04268_Sarcosine_oxidase,_gamma_subunit_family_


id: PF04290
description: Tripartite ATP-independent periplasmic transporters, DctQ component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04290
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF04290_Tripartite_ATP-independent_periplasmic_transporters,_DctQ_component


id: PF04295
description: D-galactarate dehydratase / Altronate hydrolase, C terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04295
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF04295_D-galactarate_dehydratase_/_Altronate_hydrolase,_C_terminus


id: PF04307
description: LexA-binding, inner membrane-associated putative hydrolase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04307
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF04307_LexA-binding,_inner_membrane-associated_putative_hydrolase


id: PF04422
description: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04422
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF04422_Coenzyme_F420_hydrogenase/dehydrogenase,_beta_subunit_N-term


id: PF04432
description: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04432
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF04432_Coenzyme_F420_hydrogenase/dehydrogenase,_beta_subunit_C_terminus


id: PF04445
description: Putative SAM-dependent methyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04445
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF04445_Putative_SAM-dependent_methyltransferase


id: PF04657
description: Putative inner membrane exporter, YdcZ
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04657
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF04657_Putative_inner_membrane_exporter,_YdcZ_


id: PF04679
description: ATP dependent DNA ligase C terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04679
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF04679_ATP_dependent_DNA_ligase_C_terminal_region________


id: PF04715
description: Anthranilate synthase component I, N terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04715
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF04715_Anthranilate_synthase_component_I,_N_terminal_region


id: PF04760
description: Translation initiation factor IF-2, N-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04760
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF04760_Translation_initiation_factor_IF-2,_N-terminal_region


id: PF04816
description: tRNA (adenine(22)-N(1))-methyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04816
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF04816_tRNA_(adenine(22)-N(1))-methyltransferase


id: PF04984
description: Phage tail sheath protein subtilisin-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF04984
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF04984_Phage_tail_sheath_protein_subtilisin-like_domain


id: PF05016
description: ParE toxin of type II toxin-antitoxin system, parDE
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05016
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF05016_ParE_toxin_of_type_II_toxin-antitoxin_system,_parDE


id: PF05135
description: Phage gp6-like head-tail connector protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05135
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF05135_Phage_gp6-like_head-tail_connector_protein


id: PF05157
description: Type II secretion system (T2SS), protein E, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05157
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF05157_Type_II_secretion_system_(T2SS),_protein_E,_N-terminal_domain


id: PF05173
description: Dihydrodipicolinate reductase, C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05173
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF05173_Dihydrodipicolinate_reductase,_C-terminus


id: PF05198
description: Translation initiation factor IF-3, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05198
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF05198_Translation_initiation_factor_IF-3,_N-terminal_domain


id: PF05201
description: Glutamyl-tRNAGlu reductase, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05201
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF05201_Glutamyl-tRNAGlu_reductase,_N-terminal_domain


id: PF05362
description: Lon protease (S16) C-terminal proteolytic domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05362
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF05362_Lon_protease_(S16)_C-terminal_proteolytic_domain


id: PF05378
description: Hydantoinase/oxoprolinase N-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05378
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF05378_Hydantoinase/oxoprolinase_N-terminal_region


id: PF05402
description: Coenzyme PQQ synthesis protein D (PqqD)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05402
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF05402_Coenzyme_PQQ_synthesis_protein_D_(PqqD)


id: PF05437
description: Branched-chain amino acid transport protein (AzlD)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05437
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF05437_Branched-chain_amino_acid_transport_protein_(AzlD)


id: PF05504
description: Spore germination B3/ GerAC like, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05504
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF05504_Spore_germination_B3/_GerAC_like,_C-terminal_


id: PF05698
description: Bacterial trigger factor protein (TF) C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05698
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF05698_Bacterial_trigger_factor_protein_(TF)_C-terminus


id: PF05762
description: VWA domain containing CoxE-like protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05762
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF05762_VWA_domain_containing_CoxE-like_protein


id: PF05949
description: Bacterial protein of unknown function (DUF881)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05949
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF05949_Bacterial_protein_of_unknown_function_(DUF881)


id: PF05973
description: Phage derived protein Gp49-like (DUF891)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05973
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF05973_Phage_derived_protein_Gp49-like_(DUF891)


id: PF05979
description: Bacterial protein of unknown function (DUF896)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF05979
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF05979_Bacterial_protein_of_unknown_function_(DUF896)


id: PF06050
description: 2-hydroxyglutaryl-CoA dehydratase, D-component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06050
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF06050_2-hydroxyglutaryl-CoA_dehydratase,_D-component_


id: PF06107
description: Bacterial protein of unknown function (DUF951)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06107
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF06107_Bacterial_protein_of_unknown_function_(DUF951)


id: PF06133
description: Control of competence regulator ComK, YlbF/YmcA
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06133
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF06133_Control_of_competence_regulator_ComK,_YlbF/YmcA


id: PF06305
description: Lipopolysaccharide assembly protein A domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06305
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF06305_Lipopolysaccharide_assembly_protein_A_domain


id: PF06415
description: BPG-independent PGAM N-terminus (iPGM_N)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06415
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF06415_BPG-independent_PGAM_N-terminus_(iPGM_N)


id: PF06429
description: Flagellar basal body rod FlgEFG protein C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06429
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF06429_Flagellar_basal_body_rod_FlgEFG_protein_C-terminal


id: PF06609
description: Fungal trichothecene efflux pump (TRI12)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06609
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF06609_Fungal_trichothecene_efflux_pump_(TRI12)


id: PF06686
description: Stage III sporulation protein AC/AD protein family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06686
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF06686_Stage_III_sporulation_protein_AC/AD_protein_family


id: PF06695
description: Putative small multi-drug export protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06695
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF06695_Putative_small_multi-drug_export_protein


id: PF06750
description: Bacterial Peptidase A24 N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06750
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF06750_Bacterial_Peptidase_A24_N-terminal_domain


id: PF06798
description: PrkA serine protein kinase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06798
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF06798_PrkA_serine_protein_kinase_C-terminal_domain


id: PF06808
description: Tripartite ATP-independent periplasmic transporter, DctM component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06808
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF06808_Tripartite_ATP-independent_periplasmic_transporter,_DctM_component


id: PF06898
description: Putative stage IV sporulation protein YqfD
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06898
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF06898_Putative_stage_IV_sporulation_protein_YqfD


id: PF06925
description: Monogalactosyldiacylglycerol (MGDG) synthase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06925
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF06925_Monogalactosyldiacylglycerol_(MGDG)_synthase


id: PF06941
description: 5 nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06941
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF06941_5_nucleotidase,_deoxy_(Pyrimidine),_cytosolic_type_C_protein_(NT5C)


id: PF06971
description: Putative DNA-binding protein N-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF06971
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF06971_Putative_DNA-binding_protein_N-terminus


id: PF07155
description: ECF-type riboflavin transporter, S component
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07155
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF07155_ECF-type_riboflavin_transporter,_S_component


id: PF07195
description: Flagellar hook-associated protein 2 C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07195
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF07195_Flagellar_hook-associated_protein_2_C-terminus


id: PF07261
description: Replication initiation and membrane attachment
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07261
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF07261_Replication_initiation_and_membrane_attachment


id: PF07287
description: Acyclic terpene utilisation family protein AtuA
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07287
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF07287_Acyclic_terpene_utilisation_family_protein_AtuA


id: PF07331
description: Tripartite tricarboxylate transporter TctB family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07331
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF07331_Tripartite_tricarboxylate_transporter_TctB_family


id: PF07441
description: SigmaK-factor processing regulatory protein BofA
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07441
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF07441_SigmaK-factor_processing_regulatory_protein_BofA


id: PF07451
description: Stage V sporulation protein AD (SpoVAD)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07451
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF07451_Stage_V_sporulation_protein_AD_(SpoVAD)


id: PF07454
description: Stage II sporulation protein P (SpoIIP)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07454
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF07454_Stage_II_sporulation_protein_P_(SpoIIP)


id: PF07479
description: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07479
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF07479_NAD-dependent_glycerol-3-phosphate_dehydrogenase_C-terminus


id: PF07521
description: Zn-dependent metallo-hydrolase RNA specificity domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07521
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF07521_Zn-dependent_metallo-hydrolase_RNA_specificity_domain


id: PF07664
description: Ferrous iron transport protein B C terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07664
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF07664_Ferrous_iron_transport_protein_B_C_terminus


id: PF07685
description: CobB/CobQ-like glutamine amidotransferase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07685
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF07685_CobB/CobQ-like_glutamine_amidotransferase_domain


id: PF07698
description: 7TM receptor with intracellular HD hydrolase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07698
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF07698_7TM_receptor_with_intracellular_HD_hydrolase


id: PF07733
description: Bacterial DNA polymerase III alpha NTPase domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07733
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF07733_Bacterial_DNA_polymerase_III_alpha_NTPase_domain


id: PF07963
description: Prokaryotic N-terminal methylation motif
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07963
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF07963_Prokaryotic_N-terminal_methylation_motif


id: PF07991
description: Acetohydroxy acid isomeroreductase, NADPH-binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07991
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF07991_Acetohydroxy_acid_isomeroreductase,_NADPH-binding_domain


id: PF07992
description: Pyridine nucleotide-disulphide oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF07992
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF07992_Pyridine_nucleotide-disulphide_oxidoreductase


id: PF08028
description: Acyl-CoA dehydrogenase, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08028
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF08028_Acyl-CoA_dehydrogenase,_C-terminal_domain


id: PF08207
description: Elongation factor P (EF-P) KOW-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08207
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF08207_Elongation_factor_P_(EF-P)_KOW-like_domain


id: PF08240
description: Alcohol dehydrogenase GroES-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08240
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF08240_Alcohol_dehydrogenase_GroES-like_domain


id: PF08264
description: Anticodon-binding domain of tRNA ligase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08264
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF08264_Anticodon-binding_domain_of_tRNA_ligase


id: PF08275
description: DNA primase catalytic core, N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08275
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF08275_DNA_primase_catalytic_core,_N-terminal_domain


id: PF08352
description: Oligopeptide/dipeptide transporter, C-terminal region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08352
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF08352_Oligopeptide/dipeptide_transporter,_C-terminal_region


id: PF08388
description: Group II intron, maturase-specific domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08388
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF08388_Group_II_intron,_maturase-specific_domain


id: PF08436
description: 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08436
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF08436_1-deoxy-D-xylulose_5-phosphate_reductoisomerase_C-terminal_domain


id: PF08501
description: Shikimate dehydrogenase substrate binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08501
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF08501_Shikimate_dehydrogenase_substrate_binding_domain


id: PF08540
description: Hydroxymethylglutaryl-coenzyme A synthase C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08540
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF08540_Hydroxymethylglutaryl-coenzyme_A_synthase_C_terminal


id: PF08541
description: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08541
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF08541_3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III_C_terminal__


id: PF08545
description: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08545
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF08545_3-Oxoacyl-[acyl-carrier-protein_(ACP)]_synthase_III


id: PF08669
description: Glycine cleavage T-protein C-terminal barrel domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08669
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF08669_Glycine_cleavage_T-protein_C-terminal_barrel_domain


id: PF08679
description: Dissimilatory sulfite reductase D (DsrD)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08679
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF08679_Dissimilatory_sulfite_reductase_D_(DsrD)


id: PF08769
description: Sporulation initiation factor Spo0A C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08769
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF08769_Sporulation_initiation_factor_Spo0A_C_terminal


id: PF08890
description: Phage XkdN-like tail assembly chaperone protein, TAC
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF08890
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF08890_Phage_XkdN-like_tail_assembly_chaperone_protein,_TAC


id: PF09115
description: DNA polymerase III, delta subunit, C terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09115
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF09115_DNA_polymerase_III,_delta_subunit,_C_terminal


id: PF09388
description: Spo0E like sporulation regulatory protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09388
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF09388_Spo0E_like_sporulation_regulatory_protein


id: PF09413
description: Putative prokaryotic signal transducing protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09413
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF09413_Putative_prokaryotic_signal_transducing_protein_


id: PF09527
description: Putative F0F1-ATPase subunit Ca2+/Mg2+ transporter
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09527
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF09527_Putative_F0F1-ATPase_subunit_Ca2+/Mg2+_transporter


id: PF09529
description: Integral membrane protein (intg_mem_TP0381)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09529
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF09529_Integral_membrane_protein_(intg_mem_TP0381)


id: PF09546
description: Stage III sporulation protein AE (spore_III_AE)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09546
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF09546_Stage_III_sporulation_protein_AE_(spore_III_AE)


id: PF09548
description: Stage III sporulation protein AB (spore_III_AB)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09548
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF09548_Stage_III_sporulation_protein_AB_(spore_III_AB)


id: PF09580
description: Sporulation lipoprotein YhcN/YlaJ (Spore_YhcN_YlaJ)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09580
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF09580_Sporulation_lipoprotein_YhcN/YlaJ_(Spore_YhcN_YlaJ)


id: PF09581
description: Stage III sporulation protein AF (Spore_III_AF)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09581
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF09581_Stage_III_sporulation_protein_AF_(Spore_III_AF)


id: PF09582
description: Iron only nitrogenase protein AnfO (AnfO_nitrog)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09582
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF09582_Iron_only_nitrogenase_protein_AnfO_(AnfO_nitrog)


id: PF09682
description: Bacteriophage holin of superfamily 6 (Holin_LLH)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09682
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF09682_Bacteriophage_holin_of_superfamily_6_(Holin_LLH)


id: PF09719
description: Putative redox-active protein (C_GCAxxG_C_C)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09719
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF09719_Putative_redox-active_protein_(C_GCAxxG_C_C)


id: PF09721
description: Transmembrane exosortase (Exosortase_EpsH)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09721
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF09721_Transmembrane_exosortase_(Exosortase_EpsH)


id: PF09835
description: Uncharacterized protein conserved in bacteria (DUF2062)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09835
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF09835_Uncharacterized_protein_conserved_in_bacteria_(DUF2062)


id: PF09860
description: Uncharacterized protein conserved in bacteria (DUF2087)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09860
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF09860_Uncharacterized_protein_conserved_in_bacteria_(DUF2087)


id: PF09962
description: Uncharacterized conserved protein (DUF2196)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09962
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF09962_Uncharacterized_conserved_protein_(DUF2196)


id: PF09986
description: Uncharacterized protein conserved in bacteria (DUF2225)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09986
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF09986_Uncharacterized_protein_conserved_in_bacteria_(DUF2225)


id: PF09989
description: CoA enzyme activase uncharacterised domain (DUF2229)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF09989
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF09989_CoA_enzyme_activase_uncharacterised_domain_(DUF2229)


id: PF10007
description: Uncharacterized protein conserved in archaea (DUF2250)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10007
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF10007_Uncharacterized_protein_conserved_in_archaea_(DUF2250)


id: PF10031
description: Small integral membrane protein (DUF2273)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10031
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF10031_Small_integral_membrane_protein_(DUF2273)


id: PF10035
description: Uncharacterized protein conserved in bacteria (DUF2179)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10035
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF10035_Uncharacterized_protein_conserved_in_bacteria_(DUF2179)


id: PF10050
description: Predicted metal-binding protein (DUF2284)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10050
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF10050_Predicted_metal-binding_protein_(DUF2284)


id: PF10066
description: Uncharacterized conserved protein (DUF2304)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10066
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF10066_Uncharacterized_conserved_protein_(DUF2304)


id: PF10087
description: Uncharacterized protein conserved in bacteria (DUF2325)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10087
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF10087_Uncharacterized_protein_conserved_in_bacteria_(DUF2325)


id: PF10131
description: 6-pyruvoyl-tetrahydropterin synthase related domain; membrane protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10131
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF10131_6-pyruvoyl-tetrahydropterin_synthase_related_domain;_membrane_protein


id: PF10143
description: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10143
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF10143_2,3-bisphosphoglycerate-independent_phosphoglycerate_mutase


id: PF10335
description: Putative nucleotidyltransferase substrate binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10335
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF10335_Putative_nucleotidyltransferase_substrate_binding_domain


id: PF10385
description: RNA polymerase beta subunit external 1 domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10385
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF10385_RNA_polymerase_beta_subunit_external_1_domain


id: PF10418
description: Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10418
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF10418_Iron-sulfur_cluster_binding_domain_of_dihydroorotate_dehydrogenase_B


id: PF10432
description: Bacterial phospho-glucose isomerase C-terminal SIS domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10432
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF10432_Bacterial_phospho-glucose_isomerase_C-terminal_SIS_domain


id: PF10555
description: Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10555
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF10555_Phospho-N-acetylmuramoyl-pentapeptide-transferase_signature_1_


id: PF10635
description: DisA bacterial checkpoint controller linker region
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10635
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF10635_DisA_bacterial_checkpoint_controller_linker_region_


id: PF10648
description: Immunoglobulin-like domain of bacterial spore germination
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10648
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF10648_Immunoglobulin-like_domain_of_bacterial_spore_germination


id: PF10672
description: S-adenosylmethionine-dependent methyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10672
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF10672_S-adenosylmethionine-dependent_methyltransferase


id: PF10741
description: Type II secretion system (T2SS), protein M subtype b
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF10741
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF10741_Type_II_secretion_system_(T2SS),_protein_M_subtype_b


id: PF11007
description: Spore coat associated protein JA (CotJA)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11007
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF11007_Spore_coat_associated_protein_JA_(CotJA)


id: PF11382
description: Copper transport outer membrane protein, MctB
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11382
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF11382_Copper_transport_outer_membrane_protein,_MctB


id: PF11794
description: 4-hydroxyphenylacetate 3-hydroxylase N terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11794
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF11794_4-hydroxyphenylacetate_3-hydroxylase_N_terminal


id: PF11799
description: impB/mucB/samB family C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF11799
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF11799_impB/mucB/samB_family_C-terminal_domain


id: PF12139
description: Adenosine-5-phosphosulfate reductase beta subunit
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12139
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF12139_Adenosine-5-phosphosulfate_reductase_beta_subunit


id: PF12172
description: Rubredoxin-like zinc ribbon domain (DUF35_N)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12172
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF12172_Rubredoxin-like_zinc_ribbon_domain_(DUF35_N)


id: PF12399
description: Branched-chain amino acid ATP-binding cassette transporter
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12399
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF12399_Branched-chain_amino_acid_ATP-binding_cassette_transporter


id: PF12627
description: Probable RNA and SrmB- binding site of polymerase A
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12627
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF12627_Probable_RNA_and_SrmB-_binding_site_of_polymerase_A


id: PF12729
description: Four helix bundle sensory module for signal transduction
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12729
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF12729_Four_helix_bundle_sensory_module_for_signal_transduction


id: PF12806
description: Acetyl-CoA dehydrogenase C-terminal like
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12806
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF12806_Acetyl-CoA_dehydrogenase_C-terminal_like


id: PF12850
description: Calcineurin-like phosphoesterase superfamily domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12850
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF12850_Calcineurin-like_phosphoesterase_superfamily_domain


id: PF12910
description: Antitoxin of toxin-antitoxin, RelE / RelB, TA system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12910
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF12910_Antitoxin_of_toxin-antitoxin,_RelE_/_RelB,_TA_system


id: PF12911
description: N-terminal TM domain of oligopeptide transport permease C
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF12911
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF12911_N-terminal_TM_domain_of_oligopeptide_transport_permease_C


id: PF13022
description: Helix-turn-helix of insertion element transposase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13022
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF13022_Helix-turn-helix_of_insertion_element_transposase


id: PF13085
description: 2Fe-2S iron-sulfur cluster binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13085
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF13085_2Fe-2S_iron-sulfur_cluster_binding_domain


id: PF13231
description: Dolichyl-phosphate-mannose-protein mannosyltransferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13231
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF13231_Dolichyl-phosphate-mannose-protein_mannosyltransferase


id: PF13249
description: Squalene-hopene cyclase N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13249
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF13249_Squalene-hopene_cyclase_N-terminal_domain


id: PF13290
description: Chitobiase/beta-hexosaminidase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13290
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF13290_Chitobiase/beta-hexosaminidase_C-terminal_domain


id: PF13304
description: AAA domain, putative AbiEii toxin, Type IV TA system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13304
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF13304_AAA_domain,_putative_AbiEii_toxin,_Type_IV_TA_system


id: PF13336
description: Acetyl-CoA hydrolase/transferase C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13336
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF13336_Acetyl-CoA_hydrolase/transferase_C-terminal_domain


id: PF13400
description: Putative Flp pilus-assembly TadE/G-like
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13400
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF13400_Putative_Flp_pilus-assembly_TadE/G-like


id: PF13491
description: 4TM region of DNA translocase FtsK/SpoIIIE
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13491
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF13491_4TM_region_of_DNA_translocase_FtsK/SpoIIIE


id: PF13495
description: Phage integrase, N-terminal SAM-like domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13495
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF13495_Phage_integrase,_N-terminal_SAM-like_domain


id: PF13510
description: 2Fe-2S iron-sulfur cluster binding domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13510
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF13510_2Fe-2S_iron-sulfur_cluster_binding_domain


id: PF13531
description: Bacterial extracellular solute-binding protein
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13531
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF13531_Bacterial_extracellular_solute-binding_protein


id: PF13556
description: PucR C-terminal helix-turn-helix domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13556
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF13556_PucR_C-terminal_helix-turn-helix_domain


id: PF13607
description: Succinyl-CoA ligase like flavodoxin domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13607
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF13607_Succinyl-CoA_ligase_like_flavodoxin_domain


id: PF13669
description: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13669
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF13669_Glyoxalase/Bleomycin_resistance_protein/Dioxygenase_superfamily


id: PF13677
description: Membrane MotB of proton-channel complex MotA/MotB
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13677
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF13677_Membrane_MotB_of_proton-channel_complex_MotA/MotB_


id: PF13735
description: tRNA nucleotidyltransferase domain 2 putative
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13735
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF13735_tRNA_nucleotidyltransferase_domain_2_putative


id: PF13738
description: Pyridine nucleotide-disulphide oxidoreductase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13738
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF13738_Pyridine_nucleotide-disulphide_oxidoreductase


id: PF13753
description: Putative flagellar system-associated repeat
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13753
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF13753_Putative_flagellar_system-associated_repeat


id: PF13977
description: BetI-type transcriptional repressor, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF13977
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF13977_BetI-type_transcriptional_repressor,_C-terminal


id: PF14196
description: L-2-amino-thiazoline-4-carboxylic acid hydrolase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14196
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF14196_L-2-amino-thiazoline-4-carboxylic_acid_hydrolase


id: PF14266
description: Putative component of biosynthetic module
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14266
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF14266_Putative_component_of_biosynthetic_module


id: PF14399
description: Butirosin biosynthesis protein H, N-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14399
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF14399_Butirosin_biosynthesis_protein_H,_N-terminal


id: PF14572
description: Phosphoribosyl synthetase-associated domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14572
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF14572_Phosphoribosyl_synthetase-associated_domain


id: PF14602
description: Hexapeptide repeat of succinyl-transferase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14602
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF14602_Hexapeptide_repeat_of_succinyl-transferase


id: PF14667
description: Polysaccharide biosynthesis C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14667
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF14667_Polysaccharide_biosynthesis_C-terminal_domain


id: PF14689
description: Sensor_kinase_SpoOB-type, alpha-helical domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14689
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF14689_Sensor_kinase_SpoOB-type,_alpha-helical_domain


id: PF14691
description: Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14691
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF14691_Dihydroprymidine_dehydrogenase_domain_II,_4Fe-4S_cluster


id: PF14693
description: Ribosomal protein TL5, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14693
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF14693_Ribosomal_protein_TL5,_C-terminal_domain


id: PF14714
description: KH-domain-like of EngA bacterial GTPase enzymes, C-terminal
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14714
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF14714_KH-domain-like_of_EngA_bacterial_GTPase_enzymes,_C-terminal


id: PF14748
description: Pyrroline-5-carboxylate reductase dimerisation
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF14748
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF14748_Pyrroline-5-carboxylate_reductase_dimerisation


id: PF15714
description: Stage V sporulation protein T C-terminal, transcription factor
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF15714
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF15714_Stage_V_sporulation_protein_T_C-terminal,_transcription_factor


id: PF15919
description: HicB_like antitoxin of bacterial toxin-antitoxin system
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF15919
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF15919_HicB_like_antitoxin_of_bacterial_toxin-antitoxin_system


id: PF16177
description: Acetyl-coenzyme A synthetase N-terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16177
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF16177_Acetyl-coenzyme_A_synthetase_N-terminus


id: PF16198
description: tRNA pseudouridylate synthase B C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16198
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF16198_tRNA_pseudouridylate_synthase_B_C-terminal_domain


id: PF16320
description: Ribosomal protein L7/L12 dimerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16320
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF16320_Ribosomal_protein_L7/L12_dimerisation_domain


id: PF16321
description: Sigma 54 modulation/S30EA ribosomal protein C terminus
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16321
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF16321_Sigma_54_modulation/S30EA_ribosomal_protein_C_terminus


id: PF16350
description: FAD dependent oxidoreductase central domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16350
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF16350_FAD_dependent_oxidoreductase_central_domain


id: PF16491
description: CAAX prenyl protease N-terminal, five membrane helices
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16491
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF16491_CAAX_prenyl_protease_N-terminal,_five_membrane_helices


id: PF16576
description: Barrel-sandwich domain of CusB or HlyD membrane-fusion
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16576
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF16576_Barrel-sandwich_domain_of_CusB_or_HlyD_membrane-fusion


id: PF16658
description: Class II release factor RF3, C-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16658
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF16658_Class_II_release_factor_RF3,_C-terminal_domain


id: PF16760
description: Starch/carbohydrate-binding module (family 53)
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16760
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF16760_Starch/carbohydrate-binding_module_(family_53)


id: PF16901
description: C-terminal domain of alpha-glycerophosphate oxidase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16901
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF16901_C-terminal_domain_of_alpha-glycerophosphate_oxidase


id: PF16916
description: Dimerisation domain of Zinc Transporter
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16916
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF16916_Dimerisation_domain_of_Zinc_Transporter


id: PF16917
description: Biotin/lipoate A/B protein ligase family
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16917
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF16917_Biotin/lipoate_A/B_protein_ligase_family


id: PF16924
description: Dipicolinate synthase subunit A N-terminal domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16924
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF16924_Dipicolinate_synthase_subunit_A_N-terminal_domain


id: PF16927
description: N-terminal 7TM region of histidine kinase
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF16927
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF16927_N-terminal_7TM_region_of_histidine_kinase


id: PF17136
description: Ribosomal proteins 50S L24/mitochondrial 39S L24
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17136
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF17136_Ribosomal_proteins_50S_L24/mitochondrial_39S_L24


id: PF17147
description: Pyruvate:ferredoxin oxidoreductase core domain II
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17147
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF17147_Pyruvate:ferredoxin_oxidoreductase_core_domain_II


id: PF17284
description: Spermidine synthase tetramerisation domain
memo: https://www.ebi.ac.uk/interpro/entry/pfam/PF17284
name:
  Protein Domains (Pfam).STRING_v12.0_1531961_STRINGid_PF17284_Spermidine_synthase_tetramerisation_domain


id: SM00044
description: Adenylyl- / guanylyl cyclase, catalytic domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00044
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00044_Adenylyl-_/_guanylyl_cyclase,_catalytic_domain


id: SM00052
description: Putative diguanylate phosphodiesterase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00052
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00052_Putative_diguanylate_phosphodiesterase


id: SM00062
description: Bacterial periplasmic substrate-binding proteins
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00062
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00062_Bacterial_periplasmic_substrate-binding_proteins


id: SM00065
description: Domain present in phytochromes and cGMP-specific phosphodiesterases.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00065
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00065_Domain_present_in_phytochromes_and_cGMP-specific_phosphodiesterases.


id: SM00086
description: Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00086
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00086_Motif_C-terminal_to_PAS_motifs_(likely_to_contribute_to_PAS_structural_domain)


id: SM00089
description: Repeats in polycystic kidney disease 1 (PKD1) and other proteins
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00089
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00089_Repeats_in_polycystic_kidney_disease_1_(PKD1)_and_other_proteins


id: SM00100
description: Cyclic nucleotide-monophosphate binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00100
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00100_Cyclic_nucleotide-monophosphate_binding_domain


id: SM00116
description: Domain in cystathionine beta-synthase and other proteins.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00116
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00116_Domain_in_cystathionine_beta-synthase_and_other_proteins.


id: SM00135
description: Low-density lipoprotein-receptor YWTD domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00135
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00135_Low-density_lipoprotein-receptor_YWTD_domain


id: SM00138
description: Methyltransferase, chemotaxis proteins
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00138
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00138_Methyltransferase,_chemotaxis_proteins


id: SM00220
description: Serine/Threonine protein kinases, catalytic domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00220
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00220_Serine/Threonine_protein_kinases,_catalytic_domain


id: SM00226
description: Low molecular weight phosphatase family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00226
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00226_Low_molecular_weight_phosphatase_family


id: SM00228
description: Domain present in PSD-95, Dlg, and ZO-1/2.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00228
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00228_Domain_present_in_PSD-95,_Dlg,_and_ZO-1/2.


id: SM00260
description: Two component signalling adaptor domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00260
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00260_Two_component_signalling_adaptor_domain


id: SM00271
description: DnaJ molecular chaperone homology domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00271
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00271_DnaJ_molecular_chaperone_homology_domain


id: SM00278
description: Helix-hairpin-helix DNA-binding motif class 1
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00278
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00278_Helix-hairpin-helix_DNA-binding_motif_class_1


id: SM00279
description: Helix-hairpin-helix class 2 (Pol1 family) motifs
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00279
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00279_Helix-hairpin-helix_class_2_(Pol1_family)_motifs


id: SM00283
description: Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00283
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00283_Methyl-accepting_chemotaxis-like_domains_(chemotaxis_sensory_transducer).


id: SM00304
description: HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00304
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00304_HAMP_(Histidine_kinases,_Adenylyl_cyclases,_Methyl_binding_proteins,_Phosphatases)_domain


id: SM00316
description: Ribosomal protein S1-like RNA-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00316
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00316_Ribosomal_protein_S1-like_RNA-binding_domain


id: SM00327
description: Von Willebrand factor (vWF) type A domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00327
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00327_Von_Willebrand_factor_(vWF)_type_A_domain


id: SM00342
description: Helix_turn_helix, arabinose operon control protein
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00342
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00342_Helix_turn_helix,_arabinose_operon_control_protein


id: SM00345
description: Helix_turn_helix gluconate operon transcriptional repressor
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00345
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00345_Helix_turn_helix_gluconate_operon_transcriptional_repressor


id: SM00346
description: Helix_turn_helix isocitrate lyase regulation
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00346
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00346_Helix_turn_helix_isocitrate_lyase_regulation


id: SM00347
description: Helix_turn_helix multiple antibiotic resistance protein
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00347
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00347_Helix_turn_helix_multiple_antibiotic_resistance_protein


id: SM00359
description: Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00359
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00359_Putative_RNA-binding_Domain_in_PseudoUridine_synthase_and_Archaeosine_transglycosylase


id: SM00382
description: ATPases associated with a variety of cellular activities
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00382
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00382_ATPases_associated_with_a_variety_of_cellular_activities


id: SM00393
description: Putative single-stranded nucleic acids-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00393
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00393_Putative_single-stranded_nucleic_acids-binding_domain


id: SM00411
description: Bacterial (prokaryotic) histone like domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00411
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00411_Bacterial_(prokaryotic)_histone_like_domain


id: SM00418
description: Helix_turn_helix, Arsenical Resistance Operon Repressor
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00418
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00418_Helix_turn_helix,_Arsenical_Resistance_Operon_Repressor


id: SM00419
description: Helix_turn_helix, cAMP Regulatory protein
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00419
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00419_Helix_turn_helix,_cAMP_Regulatory_protein


id: SM00420
description: Helix_turn_helix, Deoxyribose operon repressor
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00420
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00420_Helix_turn_helix,_Deoxyribose_operon_repressor


id: SM00436
description: Bacterial DNA topoisomeraes I ATP-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00436
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00436_Bacterial_DNA_topoisomeraes_I_ATP-binding_domain


id: SM00437
description: Bacterial DNA topoisomerase I DNA-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00437
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00437_Bacterial_DNA_topoisomerase_I_DNA-binding_domain


id: SM00460
description: Transglutaminase/protease-like homologues
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00460
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00460_Transglutaminase/protease-like_homologues


id: SM00464
description: Found in ATP-dependent protease La (LON)
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00464
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00464_Found_in_ATP-dependent_protease_La_(LON)


id: SM00471
description: Metal dependent phosphohydrolases with conserved HD motif.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00471
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00471_Metal_dependent_phosphohydrolases_with_conserved_HD_motif.


id: SM00479
description: Exonuclease domain in DNA-polymerase alpha and epsilon chain, ribonuclease T and other exonucleases
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00479
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00479_Exonuclease_domain_in_DNA-polymerase_alpha_and_epsilon_chain,_ribonuclease_T_and_other_exonucleases


id: SM00481
description: DNA polymerase alpha chain like domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00481
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00481_DNA_polymerase_alpha_chain_like_domain


id: SM00490
description: Helicase superfamily c-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00490
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00490_Helicase_superfamily_c-terminal_domain


id: SM00493
description: Topoisomerases, DnaG-type primases, OLD family nucleases and RecR proteins
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00493
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00493_Topoisomerases,_DnaG-type_primases,_OLD_family_nucleases_and_RecR_proteins


id: SM00525
description: Iron-sulpphur binding domain in DNA-(apurinic or apyrimidinic site) lyase (subfamily of ENDO3)
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00525
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00525_Iron-sulpphur_binding_domain_in_DNA-(apurinic_or_apyrimidinic_site)_lyase_(subfamily_of_ENDO3)


id: SM00529
description: Helix-turn-helix diphteria tox regulatory element
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00529
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00529_Helix-turn-helix_diphteria_tox_regulatory_element


id: SM00530
description: Helix-turn-helix XRE-family like proteins
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00530
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00530_Helix-turn-helix_XRE-family_like_proteins


id: SM00533
description: DNA-binding domain of DNA mismatch repair MUTS family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00533
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00533_DNA-binding_domain_of_DNA_mismatch_repair_MUTS_family


id: SM00534
description: ATPase domain of DNA mismatch repair MUTS family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00534
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00534_ATPase_domain_of_DNA_mismatch_repair_MUTS_family


id: SM00559
description: Ku70 and Ku80 are 70kDa and 80kDa subunits of the Lupus Ku autoantigen
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00559
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00559_Ku70_and_Ku80_are_70kDa_and_80kDa_subunits_of_the_Lupus_Ku_autoantigen


id: SM00562
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00562
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00562_These_are_enzymes_that_catalyze_nonsubstrate_specific_conversions_of_nucleoside_diphosphates_to_nucleoside_triphosphates._These_enzymes_play_important_roles_in_bacterial_growth,_signal_transduction_and_pathogenicity.

description:
  These are enzymes that catalyze nonsubstrate specific conversions of nucleoside diphosphates to nucleoside triphosphates. These enzymes play important roles in bacterial growth, signal transduction and pathogenicity.


id: SM00670
description: Large family of predicted nucleotide-binding domains
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00670
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00670_Large_family_of_predicted_nucleotide-binding_domains


id: SM00698
description: Possible plasma membrane-binding motif in junctophilins, PIP-5-kinases and protein kinases.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00698
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00698_Possible_plasma_membrane-binding_motif_in_junctophilins,_PIP-5-kinases_and_protein_kinases.


id: SM00717
description: SANT SWI3, ADA2, N-CoR and TFIIIB DNA-binding domains
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00717
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00717_SANT__SWI3,_ADA2,_N-CoR_and_TFIIIB_DNA-binding_domains


id: SM00729
description: Elongator protein 3, MiaB family, Radical SAM
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00729
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00729_Elongator_protein_3,_MiaB_family,_Radical_SAM


id: SM00732
description: Likely ribonuclease with RNase H fold.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00732
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00732_Likely_ribonuclease_with_RNase_H_fold.


id: SM00738
description: In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00738
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00738_In_Spt5p,_this_domain_may_confer_affinity_for_Spt4p._It_possesses_a_RNP-like_fold.


id: SM00739
description: KOW (Kyprides, Ouzounis, Woese) motif.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00739
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00739_KOW_(Kyprides,_Ouzounis,_Woese)_motif.


id: SM00748
description: Higher Eukarytoes and Prokaryotes Nucleotide-binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00748
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00748_Higher_Eukarytoes_and_Prokaryotes_Nucleotide-binding_domain


id: SM00760
description: Bacterial dnaA protein helix-turn-helix domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00760
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00760_Bacterial_dnaA_protein_helix-turn-helix_domain


id: SM00790
description: Aldehyde ferredoxin oxidoreductase, N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00790
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00790_Aldehyde_ferredoxin_oxidoreductase,_N-terminal_domain


id: SM00822
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00822
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00822_This_enzymatic_domain_is_part_of_bacterial_polyketide_synthases_and_catalyses_the_first_step_in_the_reductive_modification_of_the_beta-carbonyl_centres_in_the_growing_polyketide_chain._It_uses_NADPH_to_reduce_the_keto_group_to_a_hydroxy_group.

description:
  This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.


id: SM00827
description: Acyl transferase domain in polyketide synthase (PKS) enzymes.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00827
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00827_Acyl_transferase_domain_in_polyketide_synthase_(PKS)_enzymes.


id: SM00839
description: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00839
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00839_Glutamate/Leucine/Phenylalanine/Valine_dehydrogenase


id: SM00840
description: This DALR domain is found in cysteinyl-tRNA-synthetases.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00840
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00840_This_DALR_domain_is_found_in_cysteinyl-tRNA-synthetases.


id: SM00843
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00843
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00843_This_domain_directs_oriented_DNA_translocation_and_forms_a_winged_helix_structure._Mutated_proteins_with_substitutions_in_the_FtsK_gamma_DNA-recognition_helix_are_impaired_in_DNA_binding.

description:
  This domain directs oriented DNA translocation and forms a winged helix structure. Mutated proteins with substitutions in the FtsK gamma DNA-recognition helix are impaired in DNA binding.


id: SM00846
description: Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00846
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00846_Glyceraldehyde_3-phosphate_dehydrogenase,_NAD_binding_domain


id: SM00854
description: Bacterial capsule synthesis protein PGA_cap
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00854
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00854_Bacterial_capsule_synthesis_protein_PGA_cap


id: SM00858
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00858
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00858_This_domain_family_includes_a_range_of_different_proteins._Such_as_antifreeze_proteins_and_flagellar_FlgA_proteins,_and_CpaB_pilus_proteins.

description:
  This domain family includes a range of different proteins. Such as antifreeze proteins and flagellar FlgA proteins, and CpaB pilus proteins.


id: SM00859
description: Semialdehyde dehydrogenase, NAD binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00859
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00859_Semialdehyde_dehydrogenase,_NAD_binding_domain


id: SM00861
description: Transketolase, pyrimidine binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00861
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00861_Transketolase,_pyrimidine_binding_domain


id: SM00862
description: Transcriptional regulatory protein, C terminal
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00862
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00862_Transcriptional_regulatory_protein,_C_terminal


id: SM00863
description: Threonyl and Alanyl tRNA synthetase second additional domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00863
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00863_Threonyl_and_Alanyl_tRNA_synthetase_second_additional_domain


id: SM00865
description: Tubulin/FtsZ family, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00865
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00865_Tubulin/FtsZ_family,_C-terminal_domain


id: SM00866
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00866
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00866_The_UbiC_transcription_regulator-associated_(UTRA)_domain_is_a_conserved_ligand-binding_domain_that_has_a_similar_fold_to_PUBMED:12757941._It_is_believed_to_modulate_activity_of_bacterial_transcription_factors_in_response_to_binding_small_molecules.

description:
  The UbiC transcription regulator-associated (UTRA) domain is a conserved ligand-binding domain that has a similar fold to PUBMED:12757941. It is believed to modulate activity of bacterial transcription factors in response to binding small molecules.


id: SM00871
description: Bacterial transcription activator, effector binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00871
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00871_Bacterial_transcription_activator,_effector_binding_domain


id: SM00876
description: Biotin and Thiamin Synthesis associated domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00876
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00876_Biotin_and_Thiamin_Synthesis_associated_domain


id: SM00895
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00895
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00895_This_entry_represents_the_C-terminal_ligand_binding_domain_of_many_members_of_the_GntR_family._This_domain_probably_binds_to_a_range_of_effector_molecules_that_regulate_the_transcription_of_genes_through_the_action_of_the_N-terminal_DNA-binding_...

description:
  This entry represents the C-terminal ligand binding domain of many members of the GntR family. This domain probably binds to a range of effector molecules that regulate the transcription of genes through the action of the N-terminal DNA-binding ...


id: SM00896
description: Ferredoxin-fold anticodon binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00896
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00896_Ferredoxin-fold_anticodon_binding_domain


id: SM00898
description: Formamidopyrimidine-DNA glycosylase N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00898
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00898_Formamidopyrimidine-DNA_glycosylase_N-terminal_domain


id: SM00899
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00899
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00899_This_entry_represents_the_core_domain_of_the_ferrous_iron_(Fe2+)_transport_protein_FeoA_found_in_bacteria._This_domain_also_occurs_at_the_C-terminus_in_related_proteins._The_transporter_Feo_is_composed_of_three_proteins:_FeoA_a_small,_soluble_...

description:
  This entry represents the core domain of the ferrous iron (Fe2+) transport protein FeoA found in bacteria. This domain also occurs at the C-terminus in related proteins. The transporter Feo is composed of three proteins: FeoA a small, soluble ...


id: SM00901
description: This domain contains a conserved N-terminal (F/Y)RG motif. It is functionally uncharacterised.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00901
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00901_This_domain_contains_a_conserved_N-terminal_(F/Y)RG_motif._It_is_functionally_uncharacterised.


id: SM00922
description: Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00922
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00922_Mandelate_racemase_/_muconate_lactonizing_enzyme,_C-terminal_domain


id: SM00926
description: Molybdopterin oxidoreductase Fe4S4 domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00926
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00926_Molybdopterin_oxidoreductase_Fe4S4_domain


id: SM00928
description: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00928
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00928_NADH-ubiquinone_oxidoreductase-F_iron-sulfur_binding_region


id: SM00929
description: NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00929
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00929_NADH-ubiquinone_oxidoreductase-G_iron-sulfur_binding_region


id: SM00930
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00930
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00930_This_domain_is_found_at_the_C-terminus_of_ABC_transporter_proteins_involved_in_D-methionine_transport_as_well_as_a_number_of_ferredoxin-like_proteins._This_domain_is_likely_to_act_as_a_substrate_binding_domain._The_domain_has_been_named_after_a_...

description:
  This domain is found at the C-terminus of ABC transporter proteins involved in D-methionine transport as well as a number of ferredoxin-like proteins. This domain is likely to act as a substrate binding domain. The domain has been named after a ...


id: SM00934
description: Orotidine 5-phosphate decarboxylase / HUMPS family
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00934
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00934_Orotidine_5-phosphate_decarboxylase_/_HUMPS_family


id: SM00936
description: Penicillin-binding protein 5, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00936
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00936_Penicillin-binding_protein_5,_C-terminal_domain


id: SM00937
description: This domain is found in peptide chain release factors.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00937
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00937_This_domain_is_found_in_peptide_chain_release_factors.


id: SM00941
description: Pyrimidine nucleoside phosphorylase C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00941
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00941_Pyrimidine_nucleoside_phosphorylase_C-terminal_domain


id: SM00956
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00956
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00956_This_DNA-binding_domain_is_found_in_the_RecQ_helicase_among_others_and_has_a_helix-turn-helix_structure._The_RQC_domain,_found_only_in_RecQ_family_enzymes,_is_a_high_affinity_G4_DNA_binding_domain_PUBMED:16530788.

description:
  This DNA-binding domain is found in the RecQ helicase among others and has a helix-turn-helix structure. The RQC domain, found only in RecQ family enzymes, is a high affinity G4 DNA binding domain PUBMED:16530788.


id: SM00959
description: Rho termination factor, N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00959
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00959_Rho_termination_factor,_N-terminal_domain


id: SM00963
description: SRP54-type protein, helical bundle domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00963
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00963_SRP54-type_protein,_helical_bundle_domain


id: SM00967
description: RNA 2-O ribose methyltransferase substrate binding
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00967
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00967_RNA_2-O_ribose_methyltransferase_substrate_binding


id: SM00981
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00981
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00981_The_THUMP_domain_is_named_after_after_thiouridine_synthases,_methylases_and_PSUSs_PUBMED:11295541._The_THUMP_domain_consists_of_about_110_amino_acid_residues._The_structure_of_ThiI_reveals_that_the_THUMP_has_a_fold_unlike_that_of_previously_...

description:
  The THUMP domain is named after after thiouridine synthases, methylases and PSUSs PUBMED:11295541. The THUMP domain consists of about 110 amino acid residues. The structure of ThiI reveals that the THUMP has a fold unlike that of previously ...


id: SM00982
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00982
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00982_This_domain_is_found_in_proteins_necessary_for_strand-specific_repair_in_DNA_such_as_TRCF_in_Escherichia_coli._A_lesion_in_the_template_strand_blocks_the_RNA_polymerase_complex_(RNAP)._The_RNAP-DNA-RNA_complex_is_specifically_recognised_by_the_...

description:
  This domain is found in proteins necessary for strand-specific repair in DNA such as TRCF in Escherichia coli. A lesion in the template strand blocks the RNA polymerase complex (RNAP). The RNAP-DNA-RNA complex is specifically recognised by the ...


id: SM00983
description: Thiamin pyrophosphokinase, vitamin B1 binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00983
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00983_Thiamin_pyrophosphokinase,_vitamin_B1_binding_domain


id: SM00987
description: UreE urease accessory protein, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00987
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00987_UreE_urease_accessory_protein,_C-terminal_domain


id: SM00997
description: S-adenosyl-L-homocysteine hydrolase, NAD binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM00997
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM00997_S-adenosyl-L-homocysteine_hydrolase,_NAD_binding_domain


id: SM01002
description: Alanine dehydrogenase/PNT, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01002
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01002_Alanine_dehydrogenase/PNT,_C-terminal_domain


id: SM01003
description: Alanine dehydrogenase/PNT, N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01003
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01003_Alanine_dehydrogenase/PNT,_N-terminal_domain


id: SM01007
description: Class II Aldolase and Adducin N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01007
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01007_Class_II_Aldolase_and_Adducin_N-terminal_domain


id: SM01008
description: Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01008
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01008_Aldehyde_oxidase_and_xanthine_dehydrogenase,_a/b_hammerhead_domain


id: SM01012
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01012
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01012_ANTAR_(AmiR_and_NasR_transcription_antitermination_regulators)_is_an_RNA-binding_domain_found_in_bacterial_transcription_antitermination_regulatory_proteins._The_majority_of_the_domain_consists_of_a_coiled-coil.

description:
  ANTAR (AmiR and NasR transcription antitermination regulators) is an RNA-binding domain found in bacterial transcription antitermination regulatory proteins. The majority of the domain consists of a coiled-coil.


id: SM01016
description: Arginyl tRNA synthetase N terminal dom
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01016
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01016_Arginyl_tRNA_synthetase_N_terminal_dom


id: SM01043
description: Bacterial transcriptional activator domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01043
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01043_Bacterial_transcriptional_activator_domain


id: SM01078
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01078
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01078_This_putative_domain_contains_a_quite_highly_conserved_sequence_of_CGGC_in_its_central_region._The_domain_has_many_conserved_cysteines_and_histidines_suggestive_of_a_zinc_binding_function.

description:
  This putative domain contains a quite highly conserved sequence of CGGC in its central region. The domain has many conserved cysteines and histidines suggestive of a zinc binding function.


id: SM01080
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01080
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01080_CHASE2_is_an_extracellular_sensory_domain,_which_is_present_in_various_classes_of_transmembrane_receptors_that_are_parts_of_signal_transduction_pathways_in_bacteria._Specifically,_CHASE2_domains_are_found_in_histidine_kinases,_adenylate_cyclases,_...

description:
  CHASE2 is an extracellular sensory domain, which is present in various classes of transmembrane receptors that are parts of signal transduction pathways in bacteria. Specifically, CHASE2 domains are found in histidine kinases, adenylate cyclases, ...


id: SM01086
description: C-terminal, D2-small domain, of ClpB protein
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01086
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01086_C-terminal,_D2-small_domain,_of_ClpB_protein


id: SM01092
description: CO dehydrogenase flavoprotein C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01092
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01092_CO_dehydrogenase_flavoprotein_C-terminal_domain


id: SM01096
description: Carbamoyl-phosphate synthetase large chain, oligomerisation domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01096
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01096_Carbamoyl-phosphate_synthetase_large_chain,_oligomerisation_domain


id: SM01097
description: Carbamoyl-phosphate synthase small chain, CPSase domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01097
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01097_Carbamoyl-phosphate_synthase_small_chain,_CPSase_domain


id: SM01120
description: This domain is the predicted phosphatase domain of the dihydroxyacetone kinase family.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01120
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01120_This_domain_is_the_predicted_phosphatase_domain_of_the_dihydroxyacetone_kinase_family.


id: SM01121
description: This is the kinase domain of the dihydroxyacetone kinase family.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01121
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01121_This_is_the_kinase_domain_of_the_dihydroxyacetone_kinase_family.


id: SM01142
description: This C terminal domain is found in DOB1/SK12/helY-like DEAD box helicases [PUBMED:15112237].
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01142
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01142_This_C_terminal_domain_is_found_in_DOB1/SK12/helY-like_DEAD_box_helicases_[PUBMED:15112237].


id: SM01208
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01208
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01208_This_domain_is_found_in_a_wide_range_of_extracellular_proteins._It_is_found_tandemly_repeated_in_up_to_8_copies._It_is_found_in_the_N-terminus_of_peptidases_belonging_to_the_M26_family_which_cleave_human_IgA._The_domain_is_also_found_in_proteins_...

description:
  This domain is found in a wide range of extracellular proteins. It is found tandemly repeated in up to 8 copies. It is found in the N-terminus of peptidases belonging to the M26 family which cleave human IgA. The domain is also found in proteins ...


id: SM01209
description: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01209
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01209_Phosphoribosylglycinamide_synthetase,_ATP-grasp_(A)_domain


id: SM01210
description: Phosphoribosylglycinamide synthetase, C domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01210
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01210_Phosphoribosylglycinamide_synthetase,_C_domain


id: SM01211
description: CobB/CobQ-like glutamine amidotransferase domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01211
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01211_CobB/CobQ-like_glutamine_amidotransferase_domain


id: SM01230
description: Glutamine synthetase, catalytic domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01230
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01230_Glutamine_synthetase,_catalytic_domain


id: SM01231
description: Signal transducing histidine kinase, homodimeric domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01231
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01231_Signal_transducing_histidine_kinase,_homodimeric_domain


id: SM01232
description: Formamidopyrimidine-DNA glycosylase H2TH domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01232
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01232_Formamidopyrimidine-DNA_glycosylase_H2TH_domain


id: SM01234
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01234
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01234_This_domain_has_haemolytic_activity_(PMID:19306042)._It_is_found_in_short_(73-103_amino_acid)_proteins_and_contains_three_conserved_cysteine_residues.

description:
  This domain has haemolytic activity (PMID:19306042). It is found in short (73-103 amino acid) proteins and contains three conserved cysteine residues.


id: SM01245
description: This domain is found at the N-terminus of jag proteins.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01245
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01245_This_domain_is_found_at_the_N-terminus_of_jag_proteins.


id: SM01252
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01252
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01252_Conserved_DNA-binding_domain_that_is_found_in_a_wide_range_of_proteins_of_large_bacterial_and_eukaryotic_DNA_viruses.

description:
  Conserved DNA-binding domain that is found in a wide range of proteins of large bacterial and eukaryotic DNA viruses.


id: SM01294
description: ACPs in this domain have a fully conserved tryptophan.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01294
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01294_ACPs_in_this_domain_have_a_fully_conserved_tryptophan.


id: SM01325
description: This family of proteins has no known function.
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01325
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01325_This_family_of_proteins_has_no_known_function.


id: SM01329
description: Isocitrate/isopropylmalate dehydrogenase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01329
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01329_Isocitrate/isopropylmalate_dehydrogenase


id: SM01340
description: DNA mismatch repair protein, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01340
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01340_DNA_mismatch_repair_protein,_C-terminal_domain


id: SM01382
description: Ribosomal Proteins L2, C-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01382
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01382_Ribosomal_Proteins_L2,_C-terminal_domain


id: SM01383
description: Ribosomal Proteins L2, RNA binding domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01383
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01383_Ribosomal_Proteins_L2,_RNA_binding_domain


id: SM01390
description: Ribosomal protein S4/S9 N-terminal domain
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01390
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01390_Ribosomal_protein_S4/S9_N-terminal_domain


id: SM01400
description: N-terminal domain of ribose phosphate pyrophosphokinase
memo: http://smart.embl-heidelberg.de/smart/do_annotation.pl?BLAST=DUMMY&DOMAIN=SM01400
name:
  Protein Domains (SMART).STRING_v12.0_1531961_STRINGid_SM01400_N-terminal_domain_of_ribose_phosphate_pyrophosphokinase


